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Overview

ID MAG03708
Name SYD1_bin.41
Sample SMP0094
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Alphaproteobacteria
Order Sphingomonadales
Family Sphingomonadaceae
Genus Sphingomicrobium
Species
Assembly information
Completeness (%) 80.02
Contamination (%) 5.52
GC content (%) 66.0
N50 (bp) 20,094
Genome size (bp) 2,320,986

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2207

Gene name Description KEGG GOs EC E-value Score Sequence
SYD1_k127_1061925_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2547.0
SYD1_k127_1061925_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2498.0
SYD1_k127_1061925_10 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 297.0
SYD1_k127_1061925_11 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004948 290.0
SYD1_k127_1061925_12 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000235 263.0
SYD1_k127_1061925_13 Aldolase K01625 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 4.1.2.14,4.1.3.42 0.00000000000000000000000000000000000000000000000000000000000000000000003871 255.0
SYD1_k127_1061925_14 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000001628 180.0
SYD1_k127_1061925_15 - - - - 0.000000000000000000000000002679 119.0
SYD1_k127_1061925_2 Penicillin-binding Protein K05366 - 2.4.1.129,3.4.16.4 1.041e-307 975.0
SYD1_k127_1061925_3 Belongs to the IlvD Edd family K01690 - 4.2.1.12 1.305e-303 939.0
SYD1_k127_1061925_4 TonB-dependent Receptor Plug Domain K02014 - - 5.176e-276 872.0
SYD1_k127_1061925_5 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 4.664e-219 689.0
SYD1_k127_1061925_6 Sugar (and other) transporter K08369 - - 1.04e-216 685.0
SYD1_k127_1061925_7 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 2.641e-216 689.0
SYD1_k127_1061925_8 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 7.062e-202 632.0
SYD1_k127_1061925_9 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 491.0
SYD1_k127_1096983_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 0.0 1101.0
SYD1_k127_1096983_1 Heat shock 70 kDa protein K04043 - - 0.0 1098.0
SYD1_k127_1096983_10 amino acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 524.0
SYD1_k127_1096983_11 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006685 514.0
SYD1_k127_1096983_12 Oxidoreductase FAD-binding domain K00523,K02613 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004839 507.0
SYD1_k127_1096983_13 Pfam:DUF1237 K09704 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005305 506.0
SYD1_k127_1096983_14 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 426.0
SYD1_k127_1096983_15 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006596 388.0
SYD1_k127_1096983_16 enoyl-CoA hydratase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 376.0
SYD1_k127_1096983_17 Phenylacetic acid catabolic protein K02611 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 357.0
SYD1_k127_1096983_18 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000049 340.0
SYD1_k127_1096983_19 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000982 332.0
SYD1_k127_1096983_2 MaoC like domain K02618 - 1.2.1.91,3.3.2.12 0.0 1071.0
SYD1_k127_1096983_20 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 324.0
SYD1_k127_1096983_21 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 316.0
SYD1_k127_1096983_22 beta' subunit K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000002364 273.0
SYD1_k127_1096983_23 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000521 271.0
SYD1_k127_1096983_24 GtrA-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001032 274.0
SYD1_k127_1096983_25 Short repeat of unknown function (DUF308) - - - 0.0000000000000000000000000000000000000000000000000002591 191.0
SYD1_k127_1096983_26 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000005205 186.0
SYD1_k127_1096983_27 Phenylacetic acid degradation B K02610 - - 0.000000000000000000000000000000000000000000000003633 176.0
SYD1_k127_1096983_28 Domain of unknown function (DUF4163) - - - 0.0000000000000000000000000000000000000000000001075 181.0
SYD1_k127_1096983_29 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000000001281 165.0
SYD1_k127_1096983_3 Dicarboxylate transport - - - 2.5e-323 1022.0
SYD1_k127_1096983_30 Thioesterase superfamily K02614 - - 0.00000000000000000000000000000000000000001383 168.0
SYD1_k127_1096983_31 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000003634 157.0
SYD1_k127_1096983_32 OsmC-like protein - - - 0.000000000000000000000000000000000008089 142.0
SYD1_k127_1096983_33 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000001371 130.0
SYD1_k127_1096983_34 Bacteriophytochrome (light-regulated signal transduction histidine kinase) - - - 0.000000000000000000000000000002036 136.0
SYD1_k127_1096983_35 protein conserved in bacteria K09978 - - 0.00000000000000000000000000003847 123.0
SYD1_k127_1096983_36 Domain of unknown function (DUF4142) K08995 - - 0.000000000000000000000006173 119.0
SYD1_k127_1096983_37 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000000002227 112.0
SYD1_k127_1096983_38 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.00000000000000003031 85.0
SYD1_k127_1096983_39 Protein of unknown function (DUF3309) - - - 0.00000000000000003749 82.0
SYD1_k127_1096983_4 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 3.394e-234 730.0
SYD1_k127_1096983_41 Aminoglycoside phosphotransferase - - - 0.00000000003466 71.0
SYD1_k127_1096983_5 Dehydrogenase - - - 1.852e-194 614.0
SYD1_k127_1096983_6 Phenylacetic acid catabolic protein K02609 - 1.14.13.149 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 606.0
SYD1_k127_1096983_7 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005623 596.0
SYD1_k127_1096983_8 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 538.0
SYD1_k127_1096983_9 PFAM Aminotransferase class I and II K00832 - 2.6.1.57 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 533.0
SYD1_k127_111807_0 Thi4 family - - - 1.754e-264 820.0
SYD1_k127_111807_1 synthase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 479.0
SYD1_k127_111807_2 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008185 329.0
SYD1_k127_111807_3 EF hand - - - 0.000000000009681 74.0
SYD1_k127_1139065_0 Transporter - - - 2.069e-249 782.0
SYD1_k127_1139065_1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 376.0
SYD1_k127_1139065_2 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000049 340.0
SYD1_k127_1139065_3 Catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 350.0
SYD1_k127_1139065_4 Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001793 279.0
SYD1_k127_1139065_5 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001457 278.0
SYD1_k127_1139065_6 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000001271 261.0
SYD1_k127_1139065_7 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000000000000132 201.0
SYD1_k127_1139065_8 Protein of unknown function (DUF3035) - - - 0.00000000000000000000000000000003428 130.0
SYD1_k127_1146680_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1207.0
SYD1_k127_1146680_1 Ferrous iron transport protein B K04759 - - 1.028e-274 860.0
SYD1_k127_1146680_10 ABC-type (Unclassified) transport system, ATPase component K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003891 430.0
SYD1_k127_1146680_11 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 374.0
SYD1_k127_1146680_12 endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 356.0
SYD1_k127_1146680_13 3'-5' exonuclease K03684 - 3.1.13.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006347 353.0
SYD1_k127_1146680_14 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003756 335.0
SYD1_k127_1146680_15 RpsU-divergently transcribed K18587 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001483 263.0
SYD1_k127_1146680_16 Cold shock K03704 - - 0.000000000000000000000000000000000000000000000000000000000000000001272 234.0
SYD1_k127_1146680_17 protein conserved in bacteria K09774 - - 0.000000000000000000000000000000000000000000000000000000000000000008964 230.0
SYD1_k127_1146680_18 Protein conserved in bacteria K11719 - - 0.000000000000000000000000000000000000000000000000000000000000002669 223.0
SYD1_k127_1146680_19 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000001466 225.0
SYD1_k127_1146680_2 ATP-dependent DNA ligase K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 4.449e-263 818.0
SYD1_k127_1146680_20 Uncharacterized ACR, COG1399 - - - 0.0000000000000000000000000000000000000000000000000000000306 203.0
SYD1_k127_1146680_21 Small protein A (tmRNA-binding) - - - 0.0000000000000000000000000000000000000000000000002689 182.0
SYD1_k127_1146680_22 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000007108 150.0
SYD1_k127_1146680_23 - - - - 0.000000000000000000000000000000000001418 156.0
SYD1_k127_1146680_24 Ubiquinol-cytochrome C chaperone K17662 - - 0.00000000000000000000000000000000001155 145.0
SYD1_k127_1146680_25 COG2335 Secreted and surface protein containing fasciclin-like repeats - - - 0.0000000000000000000000000005753 122.0
SYD1_k127_1146680_26 Fe2 transport system protein A K04758 - - 0.000000000000000000000000001034 114.0
SYD1_k127_1146680_27 Cold shock K03704 - - 0.0000000000000000000000000141 108.0
SYD1_k127_1146680_29 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000004471 51.0
SYD1_k127_1146680_3 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 9.972e-201 629.0
SYD1_k127_1146680_4 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 553.0
SYD1_k127_1146680_5 peptidase S10 serine carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 548.0
SYD1_k127_1146680_6 COG0477 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006815 521.0
SYD1_k127_1146680_7 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 507.0
SYD1_k127_1146680_8 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 459.0
SYD1_k127_1146680_9 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 464.0
SYD1_k127_1167620_0 amine dehydrogenase activity - - - 0.0 1364.0
SYD1_k127_1167620_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1228.0
SYD1_k127_1167620_10 thymidine kinase K00857 - 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 302.0
SYD1_k127_1167620_11 S1/P1 Nuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 296.0
SYD1_k127_1167620_12 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 294.0
SYD1_k127_1167620_13 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000005462 265.0
SYD1_k127_1167620_14 Nucleic-acid-binding protein K07742 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003114 260.0
SYD1_k127_1167620_15 Acetyltransferase (GNAT) domain K22479 - - 0.000000000000000000000000000000000000000000000000000000000000000000008475 241.0
SYD1_k127_1167620_16 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000007502 218.0
SYD1_k127_1167620_17 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000000000000000000000000004211 209.0
SYD1_k127_1167620_18 hydrolase - - - 0.0000000000000000000000000000000000000000000000000000007285 196.0
SYD1_k127_1167620_19 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.000000000000000000000000000000000000000000000000000001566 194.0
SYD1_k127_1167620_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1194.0
SYD1_k127_1167620_20 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000000000002349 147.0
SYD1_k127_1167620_3 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 1.236e-315 988.0
SYD1_k127_1167620_4 Belongs to the heme-copper respiratory oxidase family K04561 - 1.7.2.5 1.952e-311 973.0
SYD1_k127_1167620_5 nucleoside K03317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 575.0
SYD1_k127_1167620_6 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 498.0
SYD1_k127_1167620_7 NnrS protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006612 442.0
SYD1_k127_1167620_8 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 369.0
SYD1_k127_1167620_9 Carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 359.0
SYD1_k127_1202120_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.0 1060.0
SYD1_k127_1202120_1 Belongs to the IlvD Edd family K22186 - 4.2.1.82 8.646e-321 988.0
SYD1_k127_1202120_10 reductase K22185 - 1.1.1.175 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 298.0
SYD1_k127_1202120_11 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008282 272.0
SYD1_k127_1202120_2 Aldehyde dehydrogenase K22187 - - 3.364e-228 717.0
SYD1_k127_1202120_3 Sugar (and other) transporter - - - 1.241e-218 691.0
SYD1_k127_1202120_4 Carbohydrate esterase, sialic acid-specific acetylesterase K05970 - 3.1.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 571.0
SYD1_k127_1202120_5 Aldo/keto reductase family K19265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 536.0
SYD1_k127_1202120_6 Belongs to the glycosyl hydrolase 43 family K01198,K01209 - 3.2.1.37,3.2.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 486.0
SYD1_k127_1202120_7 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 469.0
SYD1_k127_1202120_8 helix_turn _helix lactose operon repressor K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003867 434.0
SYD1_k127_1202120_9 Gluconolactonase K14274 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009135 371.0
SYD1_k127_1210729_0 NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009026 594.0
SYD1_k127_1210729_1 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007082 594.0
SYD1_k127_1210729_2 Adenylate cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007672 400.0
SYD1_k127_1210729_3 GTP cyclohydrolase K01495 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004228 353.0
SYD1_k127_1210729_4 Domain of unknown function (DUF2383) - - - 0.000000000000000000000000000000000000000000000000000008425 194.0
SYD1_k127_1210729_6 Luciferase-like monooxygenase - - - 0.0000000000004662 70.0
SYD1_k127_1308736_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1573.0
SYD1_k127_1308736_1 PFAM peptidase S9 prolyl oligopeptidase active site domain protein - - - 1.77e-257 812.0
SYD1_k127_1308736_10 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003766 357.0
SYD1_k127_1308736_11 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 335.0
SYD1_k127_1308736_12 Protease prsW family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 314.0
SYD1_k127_1308736_13 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 308.0
SYD1_k127_1308736_14 Gluconate 2-dehydrogenase K06152 - 1.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000004204 261.0
SYD1_k127_1308736_15 COG0500 SAM-dependent methyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001295 250.0
SYD1_k127_1308736_16 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000618 261.0
SYD1_k127_1308736_17 HlyD family secretion protein K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000946 248.0
SYD1_k127_1308736_18 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000002113 235.0
SYD1_k127_1308736_19 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000003022 235.0
SYD1_k127_1308736_2 GMC family oxidoreductase - - - 2.731e-255 798.0
SYD1_k127_1308736_20 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.000000000000000000000000000000000000000000000000000000000000000007367 232.0
SYD1_k127_1308736_21 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000001303 225.0
SYD1_k127_1308736_22 - - - - 0.0000000000000000000000000000000000000000000000000000001152 198.0
SYD1_k127_1308736_23 Protein of unknown function (DUF4242) - - - 0.000000000000000000000000000000000000000000001633 166.0
SYD1_k127_1308736_24 Bacterial regulatory protein, arsR family - - - 0.00000000000000000000000000000002254 128.0
SYD1_k127_1308736_25 Protein of unknown function (DUF2892) - - - 0.000000000000000000003297 96.0
SYD1_k127_1308736_3 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 2.352e-206 650.0
SYD1_k127_1308736_4 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 491.0
SYD1_k127_1308736_5 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 449.0
SYD1_k127_1308736_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008588 452.0
SYD1_k127_1308736_7 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 449.0
SYD1_k127_1308736_8 COG1538 Outer membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 387.0
SYD1_k127_1308736_9 Adenylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 372.0
SYD1_k127_13156_0 Oxidoreductase - - - 2.306e-278 862.0
SYD1_k127_13156_1 Toxic anion resistance - - - 5.523e-199 626.0
SYD1_k127_13156_10 - - - - 0.00000000000000000000001127 106.0
SYD1_k127_13156_11 TadE-like protein - - - 0.00000000000000000000001528 107.0
SYD1_k127_13156_12 Belongs to the 'phage' integrase family K03733 - - 0.000000000000000000000802 106.0
SYD1_k127_13156_13 Flp pilus assembly protein, pilin Flp K02651 - - 0.000000000000001822 78.0
SYD1_k127_13156_14 Histidine kinase - - - 0.0000002548 64.0
SYD1_k127_13156_2 dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009691 542.0
SYD1_k127_13156_3 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006893 351.0
SYD1_k127_13156_4 enoyl-CoA hydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 296.0
SYD1_k127_13156_5 Putative Flp pilus-assembly TadE/G-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007228 291.0
SYD1_k127_13156_6 periplasmic protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008856 276.0
SYD1_k127_13156_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009956 266.0
SYD1_k127_13156_8 Protein of unknown function, DUF484 K09921 - - 0.0000000000000000000000000000000000000000000000000000000000000001523 233.0
SYD1_k127_13156_9 - - - - 0.00000000000000000000000000000000000000004333 160.0
SYD1_k127_1363185_0 Helicase K03722 - 3.6.4.12 9.535e-226 727.0
SYD1_k127_1363185_1 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 2.443e-215 677.0
SYD1_k127_1363185_2 A domain family that is part of the cupin metalloenzyme superfamily. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 384.0
SYD1_k127_1394123_0 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 0.0 1167.0
SYD1_k127_1394123_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1081.0
SYD1_k127_1394123_2 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009366 283.0
SYD1_k127_1394123_3 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000001512 269.0
SYD1_k127_1394123_4 Domain of unknown function (DUF4115) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000317 253.0
SYD1_k127_1463732_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004918 512.0
SYD1_k127_1463732_1 epimerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 381.0
SYD1_k127_1463732_2 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes K00639,K00652 - 2.3.1.29,2.3.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009669 356.0
SYD1_k127_1463732_3 part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes K14987 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001376 273.0
SYD1_k127_1463732_4 gag-polyprotein putative aspartyl protease K06985 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001217 247.0
SYD1_k127_1463732_5 Belongs to the universal stress protein A family - - - 0.00000000000000000000000000000000000000000000000000003737 199.0
SYD1_k127_1463732_6 Histidine kinase K14986 - 2.7.13.3 0.000000000000000000000000000000000000000007294 156.0
SYD1_k127_1463732_7 Pfam:Pyridox_oxidase - - - 0.00000000000000000000000000000000003264 145.0
SYD1_k127_1463732_8 acyl carrier protein - - - 0.00000000000000000000000000002685 124.0
SYD1_k127_1463732_9 - - - - 0.00000004824 56.0
SYD1_k127_1499100_0 aminopeptidase N K01256 - 3.4.11.2 0.0 1139.0
SYD1_k127_1499100_1 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001427 273.0
SYD1_k127_1499100_2 transport system auxiliary component K18480 - - 0.00000000000000000000000000000000000000000000000003046 192.0
SYD1_k127_1499100_3 Uncharacterized protein conserved in bacteria (DUF2171) - - - 0.0000000000000000000000000000003596 124.0
SYD1_k127_1563152_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1383.0
SYD1_k127_1563152_1 DNA polymerase K02337 - 2.7.7.7 0.0 1373.0
SYD1_k127_1563152_10 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 480.0
SYD1_k127_1563152_11 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 394.0
SYD1_k127_1563152_12 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 369.0
SYD1_k127_1563152_13 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 368.0
SYD1_k127_1563152_14 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004859 354.0
SYD1_k127_1563152_15 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007882 353.0
SYD1_k127_1563152_17 2'-5' RNA ligase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000002335 214.0
SYD1_k127_1563152_18 PRC-barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000009197 212.0
SYD1_k127_1563152_19 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000000000000004086 191.0
SYD1_k127_1563152_2 Transport of potassium into the cell K03549 - - 4.32e-298 927.0
SYD1_k127_1563152_20 Alkyl hydroperoxide reductase K02199 - - 0.0000000000000000000000000000000000000000000000000004214 196.0
SYD1_k127_1563152_21 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000000001007 190.0
SYD1_k127_1563152_22 Protein of unknown function (DUF3775) - - - 0.000000000000000000000000000000000000000000000007722 177.0
SYD1_k127_1563152_23 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000000000000000000000000008007 172.0
SYD1_k127_1563152_24 subunit of a heme lyase K02200 - - 0.00000000000000000000000000000000000000000000928 168.0
SYD1_k127_1563152_25 Cytochrome c biogenesis factor K02200 - - 0.0000000000000000000000000000000000000000007481 170.0
SYD1_k127_1563152_26 Domain of unknown function (DUF4186) - - - 0.00000000000000000000000000000000000000003559 157.0
SYD1_k127_1563152_27 Protein of unknown function (DUF3072) - - - 0.000000000000000000000000003364 111.0
SYD1_k127_1563152_3 cytochrome C K02198 - - 5.449e-257 811.0
SYD1_k127_1563152_4 Belongs to the isocitrate and isopropylmalate dehydrogenases family K00031 - 1.1.1.42 1.244e-234 729.0
SYD1_k127_1563152_5 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 1.964e-224 703.0
SYD1_k127_1563152_6 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 2.049e-221 702.0
SYD1_k127_1563152_7 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 2.928e-200 627.0
SYD1_k127_1563152_8 ABC-type transport system, involved in lipoprotein release, permease component K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 581.0
SYD1_k127_1563152_9 cystathionine beta-lyase K01760 - 4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 476.0
SYD1_k127_1574085_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370 - 1.7.5.1 0.0 2003.0
SYD1_k127_1574085_1 nitrate reductase beta subunit K00371 - 1.7.5.1 1.317e-286 885.0
SYD1_k127_1574085_10 CRP FNR family K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000008253 231.0
SYD1_k127_1574085_11 - - - - 0.00000000000000000000000000000000000000000000000000000008177 218.0
SYD1_k127_1574085_12 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000001342 194.0
SYD1_k127_1574085_13 nitrate reductase molybdenum cofactor assembly chaperone K00373 - - 0.0000000000000000000000000000000000000000000000000001542 195.0
SYD1_k127_1574085_14 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000009622 194.0
SYD1_k127_1574085_15 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000001712 178.0
SYD1_k127_1574085_16 Molybdopterin K03635 - 2.8.1.12 0.000000000000000000000000000000000000000002894 163.0
SYD1_k127_1574085_17 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000005605 134.0
SYD1_k127_1574085_18 Major Facilitator Superfamily K02575 - - 0.0000000000000002821 80.0
SYD1_k127_1574085_19 PIN domain - - - 0.000000000002251 68.0
SYD1_k127_1574085_2 COG0659 Sulfate permease and related transporters (MFS superfamily K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 502.0
SYD1_k127_1574085_20 - - - - 0.00000005821 66.0
SYD1_k127_1574085_21 EF hand - - - 0.000000513 59.0
SYD1_k127_1574085_22 PIN domain - - - 0.00000419 49.0
SYD1_k127_1574085_3 Putative beta-barrel porin 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 441.0
SYD1_k127_1574085_4 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006087 400.0
SYD1_k127_1574085_5 Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004254 344.0
SYD1_k127_1574085_6 COG2041 Sulfite oxidase and related enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008384 342.0
SYD1_k127_1574085_7 TIGRFAM respiratory nitrate reductase, gamma subunit K00374 - 1.7.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 309.0
SYD1_k127_1574085_8 May be involved in the biosynthesis of molybdopterin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006629 278.0
SYD1_k127_1574085_9 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000009735 244.0
SYD1_k127_1579531_0 Belongs to the GARS family K01945 - 6.3.4.13 2.011e-194 616.0
SYD1_k127_1579531_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 2.529e-194 621.0
SYD1_k127_1579531_10 EntS YbdA MFS transporter - - - 0.0003287 53.0
SYD1_k127_1579531_2 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005016 271.0
SYD1_k127_1579531_3 MAPEG family - - - 0.00000000000000000000000000000000000000000000000000000000505 205.0
SYD1_k127_1579531_4 NADH ubiquinone oxidoreductase 41 kD complex I subunit - - - 0.00000000000000000000000000000000000000002955 158.0
SYD1_k127_1579531_5 Uncharacterized protein conserved in bacteria (DUF2093) - - - 0.00000000000000000000007063 100.0
SYD1_k127_1579531_7 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.000000000006315 79.0
SYD1_k127_1579531_8 - - - - 0.000000000009055 66.0
SYD1_k127_1579531_9 COG1253 Hemolysins and related proteins containing CBS domains K03699 - - 0.0000000001533 62.0
SYD1_k127_1588145_0 protein conserved in bacteria - - - 1.278e-266 833.0
SYD1_k127_1588145_1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 4.163e-223 699.0
SYD1_k127_1588145_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000003239 115.0
SYD1_k127_1588145_3 SnoaL-like domain K06893 - - 0.000000000003508 73.0
SYD1_k127_1588145_4 - - - - 0.000001454 55.0
SYD1_k127_1588145_5 Belongs to the ompA family - - - 0.000047 50.0
SYD1_k127_1606415_0 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 1.285e-270 855.0
SYD1_k127_1606415_1 HlyD family secretion protein K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000968 419.0
SYD1_k127_1606415_2 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 357.0
SYD1_k127_1606415_3 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002568 258.0
SYD1_k127_1606415_4 - - - - 0.00000000000000000000000000000000000000000000002703 191.0
SYD1_k127_1606415_5 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000001683 61.0
SYD1_k127_1607930_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.0 1297.0
SYD1_k127_1607930_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1287.0
SYD1_k127_1607930_10 Response regulator of the LytR AlgR family - - - 0.00000000000000000000000000000000000000000000000000000000000000001046 234.0
SYD1_k127_1607930_11 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000163 221.0
SYD1_k127_1607930_12 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000000000000000000003855 227.0
SYD1_k127_1607930_13 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000000000001203 198.0
SYD1_k127_1607930_14 HAD-hyrolase-like K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000002716 201.0
SYD1_k127_1607930_15 Lysylphosphatidylglycerol synthase TM region - - - 0.0000000000000000000000000000000000000000000000000004279 198.0
SYD1_k127_1607930_16 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000528 176.0
SYD1_k127_1607930_17 PFAM NIPSNAP family containing protein - - - 0.0000000000000000000000000000000000000000000007028 176.0
SYD1_k127_1607930_18 Transglycosylase SLT domain - - - 0.00000000000000000000000000000000000000000002098 171.0
SYD1_k127_1607930_19 Protein of unknown function (DUF736) - - - 0.000000000000000000000000000000000000000004859 161.0
SYD1_k127_1607930_2 Aminotransferase class-III K00819 - 2.6.1.13 1.706e-222 699.0
SYD1_k127_1607930_20 aspartate racemase K01779 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0034645,GO:0036361,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0047661,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 5.1.1.13 0.000000000000000000000000000000000009983 145.0
SYD1_k127_1607930_21 Helix-turn-helix domain - - - 0.000000000000000000000002111 108.0
SYD1_k127_1607930_22 MAPEG family - - - 0.0000000000000000000008152 99.0
SYD1_k127_1607930_23 - - - - 0.00000000000000000005261 98.0
SYD1_k127_1607930_3 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002708 550.0
SYD1_k127_1607930_4 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003798 398.0
SYD1_k127_1607930_5 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 359.0
SYD1_k127_1607930_6 NAD(P)H-binding K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 346.0
SYD1_k127_1607930_7 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008364 267.0
SYD1_k127_1607930_8 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005394 252.0
SYD1_k127_1607930_9 Phosphoenolpyruvate phosphomutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005311 248.0
SYD1_k127_1620046_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.0 1081.0
SYD1_k127_1620046_1 usher protein - - - 5.46e-279 885.0
SYD1_k127_1620046_10 cell division K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008942 378.0
SYD1_k127_1620046_11 COG3121 P pilus assembly protein, chaperone PapD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 304.0
SYD1_k127_1620046_12 Riboflavin synthase K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 282.0
SYD1_k127_1620046_13 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001333 267.0
SYD1_k127_1620046_14 Acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000002227 237.0
SYD1_k127_1620046_15 DUF218 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002506 227.0
SYD1_k127_1620046_16 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000000000000000000000000001919 207.0
SYD1_k127_1620046_17 Belongs to the SOS response-associated peptidase family - - - 0.00000000000000000000000000000000000000000000000000000002945 207.0
SYD1_k127_1620046_18 Cell division protein K09811 - - 0.000000000000000000000000000000000000000000000009136 183.0
SYD1_k127_1620046_19 zinc-ribbon domain - - - 0.000000000000000000000000000000000000000005146 167.0
SYD1_k127_1620046_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916 - 6.3.1.5 2.45e-230 725.0
SYD1_k127_1620046_20 Domain of unknown function (DUF4402) - - - 0.000000000000000000000000000000000000001609 153.0
SYD1_k127_1620046_21 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000005728 145.0
SYD1_k127_1620046_22 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.00000000000000000000000000000002203 130.0
SYD1_k127_1620046_23 Domain of unknown function (DUF4402) - - - 0.000000000000000000000002068 109.0
SYD1_k127_1620046_24 Domain of unknown function (DUF4402) - - - 0.0000000000000000002864 96.0
SYD1_k127_1620046_25 - - - - 0.0000007855 62.0
SYD1_k127_1620046_3 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 2.174e-215 674.0
SYD1_k127_1620046_4 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 1.888e-212 668.0
SYD1_k127_1620046_5 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 611.0
SYD1_k127_1620046_6 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 547.0
SYD1_k127_1620046_7 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 527.0
SYD1_k127_1620046_8 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008346 462.0
SYD1_k127_1620046_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004345 392.0
SYD1_k127_1881496_0 protein involved in exopolysaccharide biosynthesis K16554 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005849 557.0
SYD1_k127_1881496_1 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006815 329.0
SYD1_k127_1881496_2 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 321.0
SYD1_k127_1881496_3 -O-antigen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008203 315.0
SYD1_k127_1881496_4 O-Antigen ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009294 293.0
SYD1_k127_1881496_5 Periplasmic protein involved in polysaccharide export K01991 - - 0.000000000000000000000000000000000000000000000000000000000002703 217.0
SYD1_k127_1881496_6 Peptidase M48 - - - 0.0000000000000000000000000000000000000000000000000000000002054 215.0
SYD1_k127_1881496_7 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.000000000000000000000000000000000000000009653 156.0
SYD1_k127_1881496_8 PFAM Methyltransferase type 11 K15257 - - 0.00002243 57.0
SYD1_k127_1955449_0 His Kinase A (phosphoacceptor) domain - - - 0.0 2793.0
SYD1_k127_1955449_1 peptidase S9 K01354 - 3.4.21.83 0.0 1020.0
SYD1_k127_1955449_10 Fumarylacetoacetase K01555 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007981 426.0
SYD1_k127_1955449_11 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007009 378.0
SYD1_k127_1955449_12 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 331.0
SYD1_k127_1955449_13 maleylacetoacetate isomerase K01800,K01801 - 5.2.1.2,5.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 286.0
SYD1_k127_1955449_14 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930,K22478 - 2.3.1.1,2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 289.0
SYD1_k127_1955449_15 2-dehydropantoate 2-reductase K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001538 284.0
SYD1_k127_1955449_16 - - - - 0.00000000000000000000000000000000000000000000000000000000000006291 217.0
SYD1_k127_1955449_17 thioesterase K07107 - - 0.00000000000000000000000000000000000000000000000000002644 199.0
SYD1_k127_1955449_18 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000542 174.0
SYD1_k127_1955449_19 Fumarylacetoacetase K01555 - 3.7.1.2 0.000000000000000000000000000000000000000000002511 167.0
SYD1_k127_1955449_2 aminopeptidase K01262 - 3.4.11.9 7.374e-299 927.0
SYD1_k127_1955449_20 - - - - 0.00000000000000000000000006463 113.0
SYD1_k127_1955449_21 - - - - 0.00000000000000000000006372 102.0
SYD1_k127_1955449_22 Periplasmic Protein - - - 0.00000000000000000003731 100.0
SYD1_k127_1955449_23 - - - - 0.00000000000000000003778 96.0
SYD1_k127_1955449_24 KTSC domain - - - 0.000000000000000001221 87.0
SYD1_k127_1955449_3 Histidine kinase - - - 4.283e-261 821.0
SYD1_k127_1955449_4 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 4.318e-236 735.0
SYD1_k127_1955449_5 Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate K00451 - 1.13.11.5 8.386e-212 670.0
SYD1_k127_1955449_6 argininosuccinate lyase K01755 - 4.3.2.1 1.366e-204 651.0
SYD1_k127_1955449_7 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 473.0
SYD1_k127_1955449_8 Threonine aldolase K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009886 459.0
SYD1_k127_1955449_9 Aldolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 447.0
SYD1_k127_1969037_0 Polynucleotide adenylyltransferase K00970 - 2.7.7.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 455.0
SYD1_k127_1969037_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007153 279.0
SYD1_k127_1969037_2 protein conserved in bacteria K09986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002998 246.0
SYD1_k127_1969037_3 Nudix hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000004601 221.0
SYD1_k127_1969037_4 MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000003143 205.0
SYD1_k127_1969037_5 dihydroneopterin aldolase K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000000000000000000000000000000000000001176 180.0
SYD1_k127_1969037_6 Periplasmic protein TonB, links inner and outer membranes K03832 - - 0.00000000000000000000000000000000000000002429 160.0
SYD1_k127_1969037_7 Transposase K07499 - - 0.0000000000000000000000001817 108.0
SYD1_k127_1998056_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.0 1197.0
SYD1_k127_1998056_1 Belongs to the GARS family K01945 - 6.3.4.13 4.691e-195 617.0
SYD1_k127_1998056_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 617.0
SYD1_k127_1998056_3 COG1253 Hemolysins and related proteins containing CBS domains K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002728 280.0
SYD1_k127_1998056_4 NADH ubiquinone oxidoreductase 41 kD complex I subunit - - - 0.0000000000000000000000000000000000003371 145.0
SYD1_k127_1998056_5 - - - - 0.00000000000000000000000000000000318 134.0
SYD1_k127_1998056_6 Uncharacterized protein conserved in bacteria (DUF2093) - - - 0.000000000000000000000009071 101.0
SYD1_k127_2065369_0 PFAM Acyltransferase - - - 3.326e-211 676.0
SYD1_k127_2065369_1 carbamoylphosphate synthase large subunit (split gene in MJ) K01955 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000723 384.0
SYD1_k127_2065369_2 GDP-mannose 4,6 dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000003719 218.0
SYD1_k127_2065369_3 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000003834 206.0
SYD1_k127_2065369_4 - - - - 0.00000000000000000000006143 100.0
SYD1_k127_2065369_5 - - - - 0.00000000009155 68.0
SYD1_k127_2127607_0 Flp pilus assembly protein, ATPase CpaF K02283 - - 6.432e-250 773.0
SYD1_k127_2127607_1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus K00441 - 1.12.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 580.0
SYD1_k127_2127607_2 Polysaccharide pyruvyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525 430.0
SYD1_k127_2127607_3 Uncharacterized conserved protein (DUF2267) - - - 0.000000000000000000000000000000000000000000000000000000000000292 217.0
SYD1_k127_2143150_0 Putative diguanylate phosphodiesterase - - - 1.741e-207 670.0
SYD1_k127_2143150_1 Nucleotidyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004463 394.0
SYD1_k127_2143150_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001073 293.0
SYD1_k127_2143150_3 Dehydrogenase K00101 - 1.1.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000003446 240.0
SYD1_k127_2143150_4 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000002606 185.0
SYD1_k127_2157838_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0 1035.0
SYD1_k127_2157838_1 peptidase S10 serine carboxypeptidase - - - 9.49e-236 740.0
SYD1_k127_2157838_10 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000007563 146.0
SYD1_k127_2157838_11 chemotaxis K03406 - - 0.0000000000000001481 79.0
SYD1_k127_2157838_2 May be involved in recombinational repair of damaged DNA K03631 - - 6.406e-206 654.0
SYD1_k127_2157838_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 420.0
SYD1_k127_2157838_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004377 359.0
SYD1_k127_2157838_5 ribosomal protein L11 K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 366.0
SYD1_k127_2157838_6 COG0491 Zn-dependent hydrolases, including glyoxylases K17837 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009327 351.0
SYD1_k127_2157838_7 Dienelactone hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000247 284.0
SYD1_k127_2157838_8 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007437 239.0
SYD1_k127_2157838_9 Protein of unknown function (DUF1697) - - - 0.000000000000000000000000000000000000008603 162.0
SYD1_k127_2259340_0 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 - 2.1.1.13 0.0 1179.0
SYD1_k127_2259340_1 Methionine synthase I (cobalamin-dependent), methyltransferase domain K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002215 475.0
SYD1_k127_2259340_2 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 454.0
SYD1_k127_2259340_3 ArsR family transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 397.0
SYD1_k127_2290332_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009046 569.0
SYD1_k127_2290332_1 Prolyl 4-hydroxylase alpha subunit homologues. K07336 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 290.0
SYD1_k127_2290332_2 - - - - 0.000000000000000000000000000000000000000000000000000000000002837 220.0
SYD1_k127_2290332_3 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000005871 164.0
SYD1_k127_2326792_0 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 8.899e-280 869.0
SYD1_k127_2326792_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 542.0
SYD1_k127_2326792_2 Response regulator of the LytR AlgR family K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 457.0
SYD1_k127_2326792_3 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 424.0
SYD1_k127_2326792_4 Phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 401.0
SYD1_k127_2326792_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003401 379.0
SYD1_k127_2326792_6 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 364.0
SYD1_k127_2326792_7 Histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005798 338.0
SYD1_k127_2326792_8 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000008247 133.0
SYD1_k127_2326792_9 Response regulator, receiver - - - 0.0000000000000000000000000001574 119.0
SYD1_k127_2348653_0 Peptidase, M16 - - - 0.0 1152.0
SYD1_k127_2348653_1 Carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000511 576.0
SYD1_k127_2348653_10 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000003658 186.0
SYD1_k127_2348653_11 acetyl propionyl-CoA carboxylase, alpha subunit K01965 - 6.4.1.3 0.000000000000000000000000000000000000000001769 157.0
SYD1_k127_2348653_12 - - - - 0.0000000000000000000000000000001313 126.0
SYD1_k127_2348653_14 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000000001203 78.0
SYD1_k127_2348653_16 - - - - 0.000000000001294 74.0
SYD1_k127_2348653_17 PilZ domain - - - 0.000000002906 61.0
SYD1_k127_2348653_2 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 566.0
SYD1_k127_2348653_3 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 469.0
SYD1_k127_2348653_4 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 417.0
SYD1_k127_2348653_5 peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 362.0
SYD1_k127_2348653_6 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000994 351.0
SYD1_k127_2348653_8 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000001698 249.0
SYD1_k127_2348653_9 protein conserved in bacteria K21470 - - 0.00000000000000000000000000000000000000000000000000000000000002599 225.0
SYD1_k127_2374360_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1140.0
SYD1_k127_2374360_1 acyl-CoA dehydrogenase K00252 - 1.3.8.6 1.953e-218 684.0
SYD1_k127_2374360_10 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009535 267.0
SYD1_k127_2374360_11 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000001234 256.0
SYD1_k127_2374360_12 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000000007496 245.0
SYD1_k127_2374360_13 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000004131 241.0
SYD1_k127_2374360_14 Peptidase M56 - - - 0.000000000000000000000000000000000000000000000000000000006166 209.0
SYD1_k127_2374360_15 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000004918 180.0
SYD1_k127_2374360_16 Penicillinase repressor - - - 0.00000000000000000000000000000000000000000000003021 173.0
SYD1_k127_2374360_17 Outer membrane protein (OmpH-like) - - - 0.0000000000000000000000000000000000000000007652 168.0
SYD1_k127_2374360_18 - - - - 0.000000000000000000000000000000000000005923 154.0
SYD1_k127_2374360_19 50S ribosomal protein L31 K02909 - - 0.000000000000000000000000000000000000006646 147.0
SYD1_k127_2374360_2 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 2.643e-206 663.0
SYD1_k127_2374360_20 Protein of unknown function (DUF541) K09807 - - 0.000000000101 65.0
SYD1_k127_2374360_3 receptor K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 542.0
SYD1_k127_2374360_4 Predicted membrane protein (DUF2207) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 517.0
SYD1_k127_2374360_5 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005558 468.0
SYD1_k127_2374360_6 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 428.0
SYD1_k127_2374360_7 BlaR1 peptidase M56 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006616 371.0
SYD1_k127_2374360_8 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000398 338.0
SYD1_k127_2374360_9 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005439 284.0
SYD1_k127_2378829_0 beta-lactamase K01467 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003944 556.0
SYD1_k127_2378829_1 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007744 519.0
SYD1_k127_2378829_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008853 463.0
SYD1_k127_2378829_3 Acetyl-coenzyme A transporter 1 K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 434.0
SYD1_k127_2378829_4 protein conserved in bacteria K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008621 381.0
SYD1_k127_2378829_5 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 301.0
SYD1_k127_2378829_6 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000000000000005427 186.0
SYD1_k127_2378829_7 - - - - 0.00000000000000000000000000000001048 130.0
SYD1_k127_2378829_8 Pfam:DUF1049 K08992 - - 0.000000000000000000000000409 108.0
SYD1_k127_2400113_0 FR47-like protein K03802 - 6.3.2.29,6.3.2.30 1.045e-226 725.0
SYD1_k127_2400113_1 M42 glutamyl aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 484.0
SYD1_k127_2400113_2 enoyl-CoA hydratase K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006441 378.0
SYD1_k127_2400113_3 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 369.0
SYD1_k127_2400113_4 Phenylacetic acid catabolic protein K02609 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000006449 208.0
SYD1_k127_2400113_5 Thioesterase superfamily K02614 - - 0.0000000000000000000000000000000000000000003382 162.0
SYD1_k127_2409506_0 WD40-like Beta Propeller Repeat - - - 0.0 1180.0
SYD1_k127_2409506_1 NADH:flavin oxidoreductase / NADH oxidase family K00317 - 1.5.8.1,1.5.8.2 0.0 1017.0
SYD1_k127_2409506_10 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 582.0
SYD1_k127_2409506_11 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006744 554.0
SYD1_k127_2409506_12 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000364 539.0
SYD1_k127_2409506_13 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 482.0
SYD1_k127_2409506_14 RND efflux system, outer membrane lipoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 465.0
SYD1_k127_2409506_15 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 456.0
SYD1_k127_2409506_16 Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003175 441.0
SYD1_k127_2409506_17 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003273 437.0
SYD1_k127_2409506_18 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 400.0
SYD1_k127_2409506_19 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 394.0
SYD1_k127_2409506_2 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 3.314e-311 962.0
SYD1_k127_2409506_20 Hemolysin K06442 - 2.1.1.226,2.1.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006652 390.0
SYD1_k127_2409506_21 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003459 383.0
SYD1_k127_2409506_22 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01028 - 2.8.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 381.0
SYD1_k127_2409506_23 CHASE2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004335 357.0
SYD1_k127_2409506_24 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 325.0
SYD1_k127_2409506_26 Transcriptional regulator, AbiEi antitoxin N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006585 298.0
SYD1_k127_2409506_27 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001498 286.0
SYD1_k127_2409506_28 Putative bacterial sensory transduction regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009602 276.0
SYD1_k127_2409506_29 nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000009317 231.0
SYD1_k127_2409506_3 amino acid peptide transporter K03305 - - 7.476e-277 863.0
SYD1_k127_2409506_30 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000003155 247.0
SYD1_k127_2409506_31 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000001051 220.0
SYD1_k127_2409506_32 PFAM helix-turn-helix- domain containing protein AraC type - - - 0.00000000000000000000000000000000000000000000000000000007154 205.0
SYD1_k127_2409506_33 Transcriptional regulator K07979 - - 0.0000000000000000000000000000000000000000000000004113 177.0
SYD1_k127_2409506_34 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000003591 164.0
SYD1_k127_2409506_35 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) K05770 - - 0.0000000000000000000000000000000000000000009258 165.0
SYD1_k127_2409506_36 Membrane fusogenic activity K09806 - - 0.00000000000000000000000000000003042 127.0
SYD1_k127_2409506_37 Pfam:Pyridox_oxidase - - - 0.000000000000000000000000000128 120.0
SYD1_k127_2409506_38 Glutaredoxin - - - 0.00000000000000000000005398 102.0
SYD1_k127_2409506_39 - - - - 0.0000000000007177 75.0
SYD1_k127_2409506_4 acetyl-CoA hydrolase K18118 - 2.8.3.18 1.79e-266 828.0
SYD1_k127_2409506_41 thiol-disulfide isomerase and thioredoxins - - - 0.0000000301 64.0
SYD1_k127_2409506_5 Response regulator receiver - - - 4.76e-232 740.0
SYD1_k127_2409506_6 amidohydrolase - - - 2.431e-218 685.0
SYD1_k127_2409506_7 Belongs to the aldehyde dehydrogenase family K00128 GO:0003674,GO:0003824,GO:0004029,GO:0006081,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016620,GO:0016903,GO:0044237,GO:0055114,GO:0071704 1.2.1.3 8e-203 652.0
SYD1_k127_2409506_8 Aldehyde dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000806 618.0
SYD1_k127_2409506_9 belongs to the aldehyde dehydrogenase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 597.0
SYD1_k127_2447754_0 receptor - - - 0.0 1328.0
SYD1_k127_2447754_1 Belongs to the glycosyl hydrolase 67 family K01235 - 3.2.1.139 2.077e-299 933.0
SYD1_k127_2447754_10 anaphase-promoting complex binding - - - 0.00002951 55.0
SYD1_k127_2447754_2 Tryptophan halogenase K14266 - 1.14.19.9 1.171e-241 757.0
SYD1_k127_2447754_3 Tryptophan halogenase K14266 - 1.14.19.9 1.808e-234 737.0
SYD1_k127_2447754_4 Tryptophan halogenase K14266 - 1.14.19.9 1.296e-225 714.0
SYD1_k127_2447754_5 Tryptophan halogenase K14266 - 1.14.19.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 486.0
SYD1_k127_2447754_6 Glycosyl hydrolase family 10 K01181 - 3.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 442.0
SYD1_k127_2447754_7 Belongs to the glycosyl hydrolase 43 family K01198,K01209 - 3.2.1.37,3.2.1.55 0.00000000000000000000000000000000000000000000000000004353 197.0
SYD1_k127_2447754_8 Dioxygenase - - - 0.000000000000000000000001214 111.0
SYD1_k127_2447754_9 - - - - 0.00000003048 61.0
SYD1_k127_2471591_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1159.0
SYD1_k127_2471591_1 Histidine kinase - - - 2.397e-238 753.0
SYD1_k127_2471591_10 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000000000000000000000000000001273 219.0
SYD1_k127_2471591_11 Predicted membrane protein (DUF2127) - - - 0.000000000000000000000000000000000000000000000000001126 197.0
SYD1_k127_2471591_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 1.648e-196 616.0
SYD1_k127_2471591_3 YjgP YjgQ family K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007973 520.0
SYD1_k127_2471591_4 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes K00639,K00652 - 2.3.1.29,2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 436.0
SYD1_k127_2471591_5 YjgP YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 428.0
SYD1_k127_2471591_6 Diacylglycerol kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 392.0
SYD1_k127_2471591_7 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003696 366.0
SYD1_k127_2471591_8 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 352.0
SYD1_k127_2471591_9 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004273 241.0
SYD1_k127_2483471_0 TonB dependent receptor - - - 1.666e-234 749.0
SYD1_k127_2483471_1 Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations K01241 - 3.2.2.4 1.054e-202 647.0
SYD1_k127_2483471_2 Alkaline phosphatase with broad substrate specificity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005494 580.0
SYD1_k127_2483471_3 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007359 287.0
SYD1_k127_2483471_4 FecR protein K07165 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001933 253.0
SYD1_k127_2483471_5 ECF sigma factor K03088 - - 0.00000000000000000000000000000000000000000000000000000001919 202.0
SYD1_k127_2483471_6 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00520 - 1.16.1.1 0.00000000000000000000000000000000000000002394 165.0
SYD1_k127_2529419_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1037.0
SYD1_k127_2529419_1 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 3.314e-306 960.0
SYD1_k127_2529419_2 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 460.0
SYD1_k127_2529419_3 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 300.0
SYD1_k127_2529419_4 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 290.0
SYD1_k127_2529419_5 redox protein, regulator of disulfide bond formation K04063 - - 0.0000000000000000000000000000000000000000000000000000000001428 209.0
SYD1_k127_2529419_6 Transcriptional regulator K07729 - - 0.000000000000000000000000006167 110.0
SYD1_k127_2529419_7 Tetratricopeptide repeat - - - 0.00000000000000000006912 104.0
SYD1_k127_2529419_8 - - - - 0.000000000000000005203 89.0
SYD1_k127_2570217_0 COG1253 Hemolysins and related proteins containing CBS domains K03699 - - 5.477e-198 626.0
SYD1_k127_2570217_1 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000000000000000000000000000000000000000006686 228.0
SYD1_k127_2570217_2 NADH ubiquinone oxidoreductase 41 kD complex I subunit - - - 0.00000000000000000000000000000000000000000000008972 173.0
SYD1_k127_2570217_3 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000000000000000000000008487 146.0
SYD1_k127_2570217_4 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000002039 115.0
SYD1_k127_2571885_0 Histidine kinase K13587 - 2.7.13.3 4.669e-318 991.0
SYD1_k127_2571885_1 peptidase M13 K07386 - - 7.103e-300 936.0
SYD1_k127_2571885_10 L,D-transpeptidase catalytic domain K21470 - - 0.00000000000000000000000000000000000000003515 156.0
SYD1_k127_2571885_11 protein conserved in bacteria K09928 - - 0.0000000000000000000000000000000000006098 146.0
SYD1_k127_2571885_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 8.234e-249 771.0
SYD1_k127_2571885_3 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 6.023e-230 715.0
SYD1_k127_2571885_4 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 5.671e-217 696.0
SYD1_k127_2571885_5 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 404.0
SYD1_k127_2571885_6 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003102 254.0
SYD1_k127_2571885_7 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000000000000000000000000000000000002548 248.0
SYD1_k127_2571885_8 COG1073 hydrolases of the alpha beta superfamily K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000001445 230.0
SYD1_k127_2571885_9 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000001735 156.0
SYD1_k127_261648_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 1.994e-256 806.0
SYD1_k127_261648_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 1.652e-234 730.0
SYD1_k127_261648_2 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 537.0
SYD1_k127_261648_3 exodeoxyribonuclease III K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 460.0
SYD1_k127_261648_4 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009813 355.0
SYD1_k127_261648_5 - - - - 0.00000000000000000000000000000000000000000000000000000007649 202.0
SYD1_k127_261648_6 Belongs to the HesB IscA family - - - 0.0000000000000000000000000000000000000000005335 161.0
SYD1_k127_261648_7 acetyltransferase - - - 0.00000000000000000000000000000000006459 135.0
SYD1_k127_261648_8 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000005688 130.0
SYD1_k127_261648_9 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.0000000000000000000000004554 109.0
SYD1_k127_2694486_0 COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit - - - 9.783e-222 693.0
SYD1_k127_2694486_1 COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00167 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 584.0
SYD1_k127_2694486_2 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K09699 - 2.3.1.168 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006982 557.0
SYD1_k127_2694486_3 Phage shock protein A K03969 - - 0.000000000000000000000000000000000000000000000000000000000000000000001226 244.0
SYD1_k127_2694486_4 Protein of unknown function (DUF3297) - - - 0.000000000000000000000000000000000001073 140.0
SYD1_k127_2728494_0 Amidohydrolase family - - - 3.527e-209 671.0
SYD1_k127_2728494_1 alpha beta - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 537.0
SYD1_k127_2728494_2 proteins, homologs of microcin C7 resistance protein MccF K01297 - 3.4.17.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 318.0
SYD1_k127_2728494_3 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000002601 222.0
SYD1_k127_2728494_4 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.000000000000000000000000000000000000000000000000000000002992 203.0
SYD1_k127_2728494_5 - - - - 0.0000000000000000000000000000000000000000007399 168.0
SYD1_k127_2728494_6 SWI complex, BAF60b domains - - - 0.0000000000000000000000000000000009546 132.0
SYD1_k127_2728494_7 Amidohydrolase family K06015 - 3.5.1.81 0.00000000000000000000007712 106.0
SYD1_k127_2736904_0 Chain length determinant protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 394.0
SYD1_k127_2736904_1 Polysaccharide biosynthesis protein - - - 0.0000000000000002952 81.0
SYD1_k127_2736904_2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000002829 75.0
SYD1_k127_2738836_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 1.903e-214 677.0
SYD1_k127_2738836_1 Sugar (and other) transporter K08369 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 599.0
SYD1_k127_2738836_2 Belongs to the IlvD Edd family K01690 - 4.2.1.12 0.000000000000000000000000000000000000000000000000000001519 193.0
SYD1_k127_2738836_3 - - - - 0.0000000000000005404 82.0
SYD1_k127_3053096_0 glutamate dehydrogenase K15371 - 1.4.1.2 0.0 1138.0
SYD1_k127_3053096_1 PAS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 460.0
SYD1_k127_3053096_2 2-dehydropantoate 2-reductase K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005589 325.0
SYD1_k127_3053096_3 - - - - 0.00000000000000000000000000000000000000000000000000000000002834 207.0
SYD1_k127_3164288_0 of ABC transporters with duplicated ATPase K15738 - - 4.543e-302 935.0
SYD1_k127_3164288_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 617.0
SYD1_k127_3164288_10 - - - - 0.000000000000000000000000701 109.0
SYD1_k127_3164288_11 Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria - - - 0.0000000000000001575 83.0
SYD1_k127_3164288_12 - - - - 0.000000000001811 78.0
SYD1_k127_3164288_14 Protein of unknown function (DUF2892) - - - 0.000004037 52.0
SYD1_k127_3164288_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006393 501.0
SYD1_k127_3164288_3 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002644 432.0
SYD1_k127_3164288_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003673 375.0
SYD1_k127_3164288_5 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 336.0
SYD1_k127_3164288_6 Chloride channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 343.0
SYD1_k127_3164288_7 Histidine kinase - - - 0.000000000000000000000000000000000000001264 162.0
SYD1_k127_3164288_8 peptidase M13 - - - 0.0000000000000000000000000000001882 126.0
SYD1_k127_3164288_9 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.00000000000000000000000000001873 119.0
SYD1_k127_3201293_0 COG0477 Permeases of the major facilitator superfamily K16211 - - 7.455e-233 729.0
SYD1_k127_3201293_1 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000001004 229.0
SYD1_k127_3201293_2 dioxygenase activity K00477,K10674 - 1.14.11.18,1.14.11.55 0.0000000000000000000000000000000000000000000001008 181.0
SYD1_k127_3201293_3 Sugar-transfer associated ATP-grasp - - - 0.0000000002206 73.0
SYD1_k127_3277741_0 PA14 domain K05349 - 3.2.1.21 0.0 1150.0
SYD1_k127_3277741_1 Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate K06447 - 1.2.1.71 2.505e-240 750.0
SYD1_k127_3277741_10 Transcriptional regulator sugar kinase K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 331.0
SYD1_k127_3277741_11 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005156 285.0
SYD1_k127_3277741_12 isomerase K01809 - 5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000001673 267.0
SYD1_k127_3277741_13 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005781 258.0
SYD1_k127_3277741_14 SCO1/SenC K07152 - - 0.000000000000000000000000000000000000000000000000001007 190.0
SYD1_k127_3277741_15 GNAT family acetyltransferase - - - 0.0000000000000000000000000000000000000000000000001692 182.0
SYD1_k127_3277741_16 TIR domain - - - 0.000000000000000000000000002838 128.0
SYD1_k127_3277741_17 - - - - 0.00000000808 63.0
SYD1_k127_3277741_2 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 5.203e-228 717.0
SYD1_k127_3277741_3 Uncharacterized ACR, YdiU/UPF0061 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005187 603.0
SYD1_k127_3277741_4 Major Facilitator Superfamily K02429 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004371 546.0
SYD1_k127_3277741_5 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 439.0
SYD1_k127_3277741_6 Putative peptidoglycan binding domain K21470 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 434.0
SYD1_k127_3277741_7 Repeat of Unknown Function (DUF347) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 408.0
SYD1_k127_3277741_8 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 363.0
SYD1_k127_3277741_9 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 379.0
SYD1_k127_3291778_0 Belongs to the transketolase family K00615 - 2.2.1.1 2.443e-319 989.0
SYD1_k127_3291778_1 ABC transporter - - - 3.691e-317 977.0
SYD1_k127_3291778_10 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000211 154.0
SYD1_k127_3291778_11 HWE histidine kinase - - - 0.0000000000000000000000000000000004634 151.0
SYD1_k127_3291778_12 Domain of unknown function (DUF1905) - - - 0.00000000000000003675 85.0
SYD1_k127_3291778_13 Prolyl 4-hydroxylase alpha subunit homologues. K00472 - 1.14.11.2 0.0000000000003255 69.0
SYD1_k127_3291778_15 - - - - 0.00009677 52.0
SYD1_k127_3291778_2 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666,K20034 - 6.2.1.44 3.452e-234 742.0
SYD1_k127_3291778_3 Belongs to the phosphoglycerate kinase family K00927 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3 1.174e-207 650.0
SYD1_k127_3291778_4 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 575.0
SYD1_k127_3291778_5 Catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis K01623 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 425.0
SYD1_k127_3291778_6 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 366.0
SYD1_k127_3291778_7 transmembrane transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005735 364.0
SYD1_k127_3291778_8 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006392 300.0
SYD1_k127_3291778_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000001173 235.0
SYD1_k127_3312404_0 DNA segregation ATPase FtsK SpoIIIE K03466 - - 5.371e-278 874.0
SYD1_k127_3312404_1 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006952 476.0
SYD1_k127_3312404_2 Thioredoxin K05838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003417 370.0
SYD1_k127_3312404_3 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004086 277.0
SYD1_k127_3312404_4 to the N-terminal domain of Lon protease K07157 - - 0.00000000000000000000000000000000000000000000000000000000000000000000773 246.0
SYD1_k127_3459964_0 CS1-pili formation C-terminal K21966 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003465 321.0
SYD1_k127_3459964_1 - - - - 0.0000000000000000000000000000000000000000000007487 171.0
SYD1_k127_3459964_2 - - - - 0.0000000000000000000000001316 113.0
SYD1_k127_3487609_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1461.0
SYD1_k127_3487609_1 COG1505 Serine proteases of the peptidase family S9A K01322 - 3.4.21.26 0.0 1050.0
SYD1_k127_3487609_10 Galactose 1-dehydrogenase K00035 - 1.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 428.0
SYD1_k127_3487609_11 Carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009419 399.0
SYD1_k127_3487609_12 CorA-like Mg2+ transporter protein K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 370.0
SYD1_k127_3487609_13 Aminomethyltransferase K06980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003744 340.0
SYD1_k127_3487609_14 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 307.0
SYD1_k127_3487609_15 2-keto-3-deoxy-galactonokinase K00883 - 2.7.1.58 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006798 293.0
SYD1_k127_3487609_16 Crp-like helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008944 291.0
SYD1_k127_3487609_17 Phenylalanine-4-hydroxylase K00500 - 1.14.16.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007683 282.0
SYD1_k127_3487609_18 Aldolase K01631 - 4.1.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000005072 263.0
SYD1_k127_3487609_19 protein conserved in bacteria K09985 - - 0.000000000000000000000000000000000000000000000000000000000000000004675 229.0
SYD1_k127_3487609_2 amino acid K03294 - - 1.292e-257 803.0
SYD1_k127_3487609_20 COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family - - - 0.000000000000000000000000000000000000000000000000000000000000005079 228.0
SYD1_k127_3487609_21 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.0000000000000000000000000000000000000000000000000000000000001966 213.0
SYD1_k127_3487609_22 Iron-sulfur cluster assembly protein K02612 - - 0.0000000000000000000000000000000000000000000000000000000000002021 214.0
SYD1_k127_3487609_23 Protein of unknown function (DUF2585) - - - 0.00000000000000000000000000000000000000000000000000000000003812 211.0
SYD1_k127_3487609_24 Lipid A 3-O-deacylase (PagL) - - - 0.00000000000000000000000000000000000000000000000000000000006622 212.0
SYD1_k127_3487609_25 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000003755 104.0
SYD1_k127_3487609_26 - - - - 0.00000000000000000407 98.0
SYD1_k127_3487609_28 Flp Fap pilin component K02651 - - 0.0005464 46.0
SYD1_k127_3487609_3 Glycosyl hydrolase family 1 - - - 2.056e-229 715.0
SYD1_k127_3487609_4 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 6.356e-207 652.0
SYD1_k127_3487609_5 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 1.167e-197 623.0
SYD1_k127_3487609_6 Belongs to the thiolase family - - - 1.449e-196 622.0
SYD1_k127_3487609_7 mandelate racemase muconate lactonizing K01684,K01781,K08323 - 4.2.1.6,4.2.1.8,5.1.2.2 3.631e-194 620.0
SYD1_k127_3487609_8 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005199 501.0
SYD1_k127_3487609_9 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 497.0
SYD1_k127_3501028_0 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity K06188 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006704 357.0
SYD1_k127_3501028_1 COG0659 Sulfate permease and related transporters (MFS superfamily K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001155 255.0
SYD1_k127_3501028_2 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000009363 173.0
SYD1_k127_3501028_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000004269 173.0
SYD1_k127_3519458_0 protease with the C-terminal PDZ - - - 3.178e-257 807.0
SYD1_k127_3519458_1 Outer membrane receptor proteins, mostly Fe transport - - - 9.452e-223 722.0
SYD1_k127_3519458_10 Small Multidrug Resistance protein K11741 - - 0.00000000000000000000000000000000000000000001394 165.0
SYD1_k127_3519458_11 CBS domain - - - 0.0000000000000000000000000000000000000000000571 170.0
SYD1_k127_3519458_12 Domain of unknown function (DUF4167) - - - 0.0000000000000000000000000000000000002383 150.0
SYD1_k127_3519458_14 - - - - 0.000000002937 67.0
SYD1_k127_3519458_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 6.932e-210 656.0
SYD1_k127_3519458_3 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 582.0
SYD1_k127_3519458_4 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005561 567.0
SYD1_k127_3519458_5 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 568.0
SYD1_k127_3519458_6 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009949 340.0
SYD1_k127_3519458_7 EamA-like transporter family K15270 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001286 266.0
SYD1_k127_3519458_8 Acyl-CoA hydrolase K10806 - - 0.00000000000000000000000000000000000000000000000000008483 193.0
SYD1_k127_3519458_9 Protein of unknown function (DUF1345) - - - 0.00000000000000000000000000000000000000000000000000009811 194.0
SYD1_k127_3616969_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1343.0
SYD1_k127_3616969_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 4.377e-251 777.0
SYD1_k127_3616969_10 membrane protein, TerC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006793 286.0
SYD1_k127_3616969_11 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006267 268.0
SYD1_k127_3616969_12 membrane protein, TerC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003355 261.0
SYD1_k127_3616969_13 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001194 259.0
SYD1_k127_3616969_14 DNA polymerase III K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000002829 263.0
SYD1_k127_3616969_15 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001744 238.0
SYD1_k127_3616969_16 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000000003485 231.0
SYD1_k127_3616969_17 membrane K08973 - - 0.000000000000000000000000000000000000000000000000000000000000000004465 229.0
SYD1_k127_3616969_18 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000000000000000001774 226.0
SYD1_k127_3616969_19 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase - - - 0.00000000000000000000000000000000000000000000000000000000001769 214.0
SYD1_k127_3616969_2 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000273 591.0
SYD1_k127_3616969_20 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000000000000000000000000004799 215.0
SYD1_k127_3616969_21 PTS IIA-like nitrogen-regulatory protein PtsN K02806 - - 0.0000000000000000000000000000000000000000000000000000000001277 207.0
SYD1_k127_3616969_22 Domain of unknown function (DUF3576) - - - 0.0000000000000000000000000000000000000000000000000000000005154 205.0
SYD1_k127_3616969_23 Lipopolysaccharide-assembly K03643 - - 0.00000000000000000000000000000000000000000000000000003606 199.0
SYD1_k127_3616969_24 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000000004675 181.0
SYD1_k127_3616969_25 DNA segregation ATPase FtsK SpoIIIE K03466 - - 0.000000000000000000000000000004271 119.0
SYD1_k127_3616969_26 Thiamine monophosphate synthase K00788 - 2.5.1.3 0.000000000000005687 84.0
SYD1_k127_3616969_27 Protein of unknown function (DUF1491) - - - 0.000004502 56.0
SYD1_k127_3616969_3 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 479.0
SYD1_k127_3616969_4 exodeoxyribonuclease III K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 462.0
SYD1_k127_3616969_5 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005801 417.0
SYD1_k127_3616969_6 Chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006125 393.0
SYD1_k127_3616969_7 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 382.0
SYD1_k127_3616969_8 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000075 334.0
SYD1_k127_3616969_9 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 332.0
SYD1_k127_3637234_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0 1081.0
SYD1_k127_3637234_1 FAD linked oxidase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 589.0
SYD1_k127_3637234_2 Sugar (and other) transporter K03762 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004227 581.0
SYD1_k127_3637234_3 Adenylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 386.0
SYD1_k127_3637234_4 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 299.0
SYD1_k127_3637234_5 GcrA cell cycle regulator K13583 - - 0.00000000000000000000000000000000000000000000000000000000000000000874 224.0
SYD1_k127_3637234_6 Belongs to the small heat shock protein (HSP20) family K04080 - - 0.0000000000000000000000000000000000000000000000000000001434 201.0
SYD1_k127_3736937_0 helicase K03724 - - 0.0 1206.0
SYD1_k127_3736937_1 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.00000000000000000000000000000000000000000000000000000000642 199.0
SYD1_k127_3736937_2 Esterase PHB depolymerase K03932 - - 0.000000000000000000000000000000001431 135.0
SYD1_k127_3757485_0 Isocitrate lyase K01637 - 4.1.3.1 1.74e-218 687.0
SYD1_k127_3757485_1 Malate synthase K01637,K01638 GO:0003674,GO:0003824,GO:0004451,GO:0004474,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0007275,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0009987,GO:0010259,GO:0016740,GO:0016746,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0032501,GO:0032502,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046487,GO:0046912,GO:0048856,GO:0071704 2.3.3.9,4.1.3.1 1.505e-205 664.0
SYD1_k127_3757485_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009789 283.0
SYD1_k127_3757485_11 Putative beta-barrel porin 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001035 272.0
SYD1_k127_3757485_12 Protein of unknown function (DUF3365) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001165 260.0
SYD1_k127_3757485_13 Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000001718 234.0
SYD1_k127_3757485_14 Sulfotransferase domain - - - 0.00000000000000000000000000000000000000000000002967 177.0
SYD1_k127_3757485_15 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000000000000000002681 166.0
SYD1_k127_3757485_16 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000001394 117.0
SYD1_k127_3757485_17 Sulfotransferase domain - - - 0.0000000000000000000000002149 107.0
SYD1_k127_3757485_19 - - - - 0.000000007812 67.0
SYD1_k127_3757485_2 Pectate lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 575.0
SYD1_k127_3757485_20 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000001363 63.0
SYD1_k127_3757485_21 Chaperone protein dnaJ 20, chloroplastic-like - - - 0.00008066 55.0
SYD1_k127_3757485_3 IrrE N-terminal-like domain K07110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 489.0
SYD1_k127_3757485_4 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 497.0
SYD1_k127_3757485_5 epimerase dehydratase K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 456.0
SYD1_k127_3757485_6 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 422.0
SYD1_k127_3757485_7 O-Antigen ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005523 370.0
SYD1_k127_3757485_8 Sulfotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 328.0
SYD1_k127_3757485_9 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009015 283.0
SYD1_k127_3819126_0 protein conserved in bacteria K09919 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006268 497.0
SYD1_k127_3819126_1 COG0330 Membrane protease subunits, stomatin prohibitin homologs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 442.0
SYD1_k127_3819126_10 - - - - 0.0000000000000000003013 91.0
SYD1_k127_3819126_11 Protein of unknown function (DUF3572) - - - 0.000000000000000003476 94.0
SYD1_k127_3819126_2 MTH538 TIR-like domain (DUF1863) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 410.0
SYD1_k127_3819126_3 Asparaginase K13051 - 3.4.19.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005701 370.0
SYD1_k127_3819126_4 Belongs to the short-chain dehydrogenases reductases (SDR) family K05886 - 1.1.1.276 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007656 345.0
SYD1_k127_3819126_5 DNA mediated transformation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005916 298.0
SYD1_k127_3819126_6 endoribonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000009682 234.0
SYD1_k127_3819126_7 response regulator K11443 - - 0.00000000000000000000000000000000000000000009477 169.0
SYD1_k127_3819126_8 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000000000000001154 107.0
SYD1_k127_3819126_9 - - - - 0.0000000000000000002331 89.0
SYD1_k127_3820095_0 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K09699 - 2.3.1.168 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008464 540.0
SYD1_k127_3820095_1 COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00167 - 1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 424.0
SYD1_k127_3820095_2 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity K01118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001152 257.0
SYD1_k127_3820095_3 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000000000000000592 171.0
SYD1_k127_3820095_4 Aspartyl/Asparaginyl beta-hydroxylase K12979 - - 0.0000000000000000000000000000000000000000000001006 178.0
SYD1_k127_3820095_5 - - - - 0.000000000000000000000002026 109.0
SYD1_k127_3891033_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 3.364e-312 983.0
SYD1_k127_3891033_1 Histidine K01745 - 4.3.1.3 1.345e-218 694.0
SYD1_k127_3891033_2 Imidazolone-5-propionate hydrolase K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 419.0
SYD1_k127_3891033_3 Arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 360.0
SYD1_k127_3891033_4 Natural resistance-associated macrophage protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003548 339.0
SYD1_k127_3891033_5 ATP dependent DNA ligase C terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002633 262.0
SYD1_k127_3891033_6 Alkylated DNA repair protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002075 234.0
SYD1_k127_3891033_7 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.0009222 42.0
SYD1_k127_3892123_0 Amidohydrolase family - - - 2.477e-200 633.0
SYD1_k127_3892123_1 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 434.0
SYD1_k127_3892123_10 CutA1 divalent ion tolerance protein K03926 - - 0.00000000000000000000000000009591 118.0
SYD1_k127_3892123_11 aldo keto reductase - - - 0.00000000000000000000000003385 108.0
SYD1_k127_3892123_13 - - - - 0.00000000000000001821 89.0
SYD1_k127_3892123_14 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.000171 44.0
SYD1_k127_3892123_2 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004391 356.0
SYD1_k127_3892123_3 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 301.0
SYD1_k127_3892123_4 Crp-like helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 304.0
SYD1_k127_3892123_5 Crp-like helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003606 271.0
SYD1_k127_3892123_6 Lysylphosphatidylglycerol synthase TM region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001469 263.0
SYD1_k127_3892123_7 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002661 252.0
SYD1_k127_3892123_8 Belongs to the Fur family K09823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001278 244.0
SYD1_k127_3892123_9 MerC mercury resistance protein - - - 0.000000000000000000000000000000001635 133.0
SYD1_k127_3896998_0 chemotaxis protein K03407 - 2.7.13.3 0.0 1079.0
SYD1_k127_3896998_1 RNB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 509.0
SYD1_k127_3896998_10 PspC domain K03973 - - 0.0000000000000000000000000000000000000000000000001162 179.0
SYD1_k127_3896998_11 - - - - 0.00000000000000000000000000002817 120.0
SYD1_k127_3896998_13 - - - - 0.00000000000108 71.0
SYD1_k127_3896998_14 - - - - 0.0000000004917 64.0
SYD1_k127_3896998_16 - - - - 0.0001367 53.0
SYD1_k127_3896998_2 N-acetylmuramoyl-L-alanine amidase K01447 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006291 409.0
SYD1_k127_3896998_3 COG1352 Methylase of chemotaxis methyl-accepting proteins K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006031 412.0
SYD1_k127_3896998_4 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009846 407.0
SYD1_k127_3896998_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005651 349.0
SYD1_k127_3896998_6 DnaJ molecular chaperone homology domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007697 267.0
SYD1_k127_3896998_7 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000000000000000000000000000000001018 233.0
SYD1_k127_3896998_8 SufE protein probably involved in Fe-S center assembly K02426 - - 0.000000000000000000000000000000000000000000000000000000000003108 210.0
SYD1_k127_3896998_9 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000000000000000000000000000000000000003608 209.0
SYD1_k127_3897571_0 TonB dependent receptor - - - 0.0 1156.0
SYD1_k127_3897571_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 5.258e-266 827.0
SYD1_k127_3897571_10 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 353.0
SYD1_k127_3897571_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914 342.0
SYD1_k127_3897571_12 Sporulation related domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005384 323.0
SYD1_k127_3897571_13 phosphoserine phosphatase K01079 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005726 288.0
SYD1_k127_3897571_14 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002237 282.0
SYD1_k127_3897571_15 FOG TPR repeat, SEL1 subfamily K07126 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008675 251.0
SYD1_k127_3897571_16 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000004429 240.0
SYD1_k127_3897571_17 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000004072 244.0
SYD1_k127_3897571_18 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000000000000000000000000000000000000000001944 227.0
SYD1_k127_3897571_19 - - - - 0.00000000000000000000000000000000000000000000000000005331 194.0
SYD1_k127_3897571_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 2.765e-238 745.0
SYD1_k127_3897571_20 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000009785 143.0
SYD1_k127_3897571_21 Small integral membrane protein - - - 0.00000000000000000001554 95.0
SYD1_k127_3897571_22 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000006171 87.0
SYD1_k127_3897571_23 - - - - 0.00001133 59.0
SYD1_k127_3897571_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 6.84e-203 646.0
SYD1_k127_3897571_4 Alkaline phosphatase with broad substrate specificity K01077 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 574.0
SYD1_k127_3897571_5 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 505.0
SYD1_k127_3897571_6 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003589 495.0
SYD1_k127_3897571_7 Protein of unknown function (DUF3089) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008263 423.0
SYD1_k127_3897571_8 involved in chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 413.0
SYD1_k127_3897571_9 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005412 381.0
SYD1_k127_392905_0 Polysaccharide biosynthesis protein K13013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003523 607.0
SYD1_k127_392905_1 Glycosyl transferase 4-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004887 435.0
SYD1_k127_392905_2 Formyl transferase, C-terminal domain K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 349.0
SYD1_k127_392905_3 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003535 333.0
SYD1_k127_392905_4 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 307.0
SYD1_k127_392905_5 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003253 270.0
SYD1_k127_392905_6 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000009362 206.0
SYD1_k127_392905_7 helix_turn_helix, Lux Regulon K07684 - - 0.00000000000000000000000000000000000000000000000008315 186.0
SYD1_k127_392905_8 ATP-grasp domain K01955 - 6.3.5.5 0.000000000000000000000000004904 124.0
SYD1_k127_396843_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1150.0
SYD1_k127_396843_1 Prolyl oligopeptidase K01322 - 3.4.21.26 0.0 1033.0
SYD1_k127_396843_10 Belongs to the SEDS family K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 594.0
SYD1_k127_396843_11 Pyrrolo-quinoline quinone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003628 571.0
SYD1_k127_396843_12 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004167 533.0
SYD1_k127_396843_13 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 505.0
SYD1_k127_396843_14 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009827 488.0
SYD1_k127_396843_15 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003167 451.0
SYD1_k127_396843_16 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 382.0
SYD1_k127_396843_17 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 355.0
SYD1_k127_396843_18 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004237 336.0
SYD1_k127_396843_19 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 292.0
SYD1_k127_396843_2 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.314e-306 943.0
SYD1_k127_396843_20 Crp-like helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003304 277.0
SYD1_k127_396843_21 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005608 255.0
SYD1_k127_396843_22 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000000000000000000000000001664 223.0
SYD1_k127_396843_23 Hpt domain K20976 - - 0.000000000000000000000000000000000000000000000000000000000000003341 220.0
SYD1_k127_396843_24 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000412 220.0
SYD1_k127_396843_25 Tetratricopeptide repeat-like domain - - - 0.0000000000000000000000000000000000000000000000000000000004872 209.0
SYD1_k127_396843_26 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000001949 198.0
SYD1_k127_396843_27 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000002635 189.0
SYD1_k127_396843_28 Ribosomal protein L17 K02879 - - 0.0000000000000000000000000000000000000000000002807 168.0
SYD1_k127_396843_29 Activator of Hsp90 ATPase - - - 0.000000000000000000000000000000000000000001539 166.0
SYD1_k127_396843_3 Metal-independent alpha-mannosidase (GH125) K09704 - - 3.659e-276 866.0
SYD1_k127_396843_30 - - - - 0.0000000000000000000000000000000000000002849 160.0
SYD1_k127_396843_31 - - - - 0.000000000000000000000000000000000003542 151.0
SYD1_k127_396843_32 regulatory protein, arsR - - - 0.0000000000000000000000000000000000698 136.0
SYD1_k127_396843_33 - - - - 0.000000000000000002094 92.0
SYD1_k127_396843_36 Uncharacterized protein conserved in bacteria (DUF2171) - - - 0.00001302 55.0
SYD1_k127_396843_4 Cell division protein FtsI penicillin-binding protein K03587 - 3.4.16.4 6.444e-238 749.0
SYD1_k127_396843_5 Peptidase family M28 - - - 8.94e-225 706.0
SYD1_k127_396843_6 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 9.048e-219 686.0
SYD1_k127_396843_7 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 1.058e-212 669.0
SYD1_k127_396843_8 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004211 614.0
SYD1_k127_396843_9 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006049 607.0
SYD1_k127_3989304_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 5.982e-194 616.0
SYD1_k127_3989304_1 ABC-type transport system involved in Fe-S cluster assembly, ATPase component K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 391.0
SYD1_k127_3989304_2 ABC-type transport system involved in Fe-S cluster assembly, permease component K09015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003342 263.0
SYD1_k127_3989304_3 FeS assembly SUF system protein - - - 0.000000000000000000000000000000000000000000000000000000000000002327 220.0
SYD1_k127_3989304_4 ABC-type transport system involved in Fe-S cluster assembly, permease component K09014 - - 0.0000000000000000000000000000000000000000000000000000000187 199.0
SYD1_k127_4049291_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 1.537e-276 860.0
SYD1_k127_4049291_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 3.2e-218 683.0
SYD1_k127_4049291_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 601.0
SYD1_k127_4049291_3 dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007478 529.0
SYD1_k127_4049291_4 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 519.0
SYD1_k127_4049291_5 Cell wall formation K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006034 503.0
SYD1_k127_4049291_6 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000466 469.0
SYD1_k127_4049291_7 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004254 382.0
SYD1_k127_4049291_8 Cell division protein FtsQ K03589 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 334.0
SYD1_k127_4049291_9 Sporulation related domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000008489 252.0
SYD1_k127_4053327_0 response regulator - - - 1.913e-239 752.0
SYD1_k127_4053327_1 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089 533.0
SYD1_k127_4053327_2 membrane-bound lytic murein transglycosylase K08304 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 503.0
SYD1_k127_4053327_3 import inner membrane translocase, subunit Tim44 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001107 265.0
SYD1_k127_4053327_4 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000252 260.0
SYD1_k127_4053327_5 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.00000000000000000000000000000000000000000000000000000000000001055 221.0
SYD1_k127_4053327_6 - - - - 0.00000000000000000000000000000000000000000000000000000008325 217.0
SYD1_k127_4053327_7 protein conserved in bacteria - - - 0.00000000000000000000000000000001273 136.0
SYD1_k127_4053327_8 Cupin domain - - - 0.000000000000000000000000000005433 123.0
SYD1_k127_4053327_9 Cupin domain - - - 0.000000000000000000000006309 115.0
SYD1_k127_4133069_0 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 380.0
SYD1_k127_4133069_1 COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000006944 274.0
SYD1_k127_4133069_3 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K00404 - 1.9.3.1 0.000000000000000000000000000004986 123.0
SYD1_k127_4133069_4 response regulator K02282,K07782,K19135 - - 0.0000000000000000000000000001116 123.0
SYD1_k127_4133069_5 - - - - 0.000000000000000000000000009228 114.0
SYD1_k127_4133069_6 Domain of unknown function (DUF4440) - - - 0.00000000000003687 78.0
SYD1_k127_4133069_7 Transcriptional regulatory protein, C terminal - - - 0.000475 51.0
SYD1_k127_4135100_0 Zn-dependent dipeptidase, microsomal dipeptidase K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 531.0
SYD1_k127_4135100_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008926 501.0
SYD1_k127_4135100_2 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 370.0
SYD1_k127_4135100_3 ICC-like phosphoesterases K06953 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 294.0
SYD1_k127_4135100_4 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000000000000001471 122.0
SYD1_k127_4135100_5 component I K01665,K03342 - 2.6.1.85,4.1.3.38 0.000000000000000000008899 95.0
SYD1_k127_415739_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1236.0
SYD1_k127_415739_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1039.0
SYD1_k127_415739_10 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008181 453.0
SYD1_k127_415739_11 Putative esterase K01070 - 3.1.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007728 424.0
SYD1_k127_415739_12 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009845 426.0
SYD1_k127_415739_13 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007897 379.0
SYD1_k127_415739_14 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007867 358.0
SYD1_k127_415739_15 ubiquinol oxidase subunit K02297 - 1.10.3.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 342.0
SYD1_k127_415739_16 glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002596 280.0
SYD1_k127_415739_17 Domain of unknown function (DUF4010) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004877 280.0
SYD1_k127_415739_18 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002287 256.0
SYD1_k127_415739_19 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000001006 252.0
SYD1_k127_415739_2 Belongs to the heme-copper respiratory oxidase family K02298 - 1.10.3.10 4.71e-306 952.0
SYD1_k127_415739_20 oxidase subunit K02299 - - 0.000000000000000000000000000000000000000000000000000000000000000000002874 256.0
SYD1_k127_415739_21 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - - - 0.00000000000000000000000000000000000000000000000000000000004997 223.0
SYD1_k127_415739_22 Protein of unknown function (DUF1211) - - - 0.000000000000000000000000000000000000000000000000000002547 198.0
SYD1_k127_415739_23 COG0346 Lactoylglutathione lyase and related lyases - - - 0.00000000000000000000000000000000000000000000000001548 183.0
SYD1_k127_415739_24 Protein of unknown function (DUF1211) - - - 0.000000000000000000000000000000000000000000000001109 188.0
SYD1_k127_415739_25 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000000000000000000002062 180.0
SYD1_k127_415739_26 Protein of unknown function (DUF2721) - - - 0.00000000000000000000000000000000000000000000004415 177.0
SYD1_k127_415739_27 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000000000004357 171.0
SYD1_k127_415739_28 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000001127 173.0
SYD1_k127_415739_29 to be involved in C-type cytochrome biogenesis - - - 0.00000000000000000000000000000000000000001945 166.0
SYD1_k127_415739_3 single-stranded-DNA-specific exonuclease RecJ K07462 - - 6.423e-241 758.0
SYD1_k127_415739_30 Prokaryotic Cytochrome C oxidase subunit IV K02300 - - 0.0000000000000000000000000000000000000764 155.0
SYD1_k127_415739_31 membrane - - - 0.000000000000000000000000000000000006084 142.0
SYD1_k127_415739_32 Protein conserved in bacteria - - - 0.0000000000000000000000000000000001599 138.0
SYD1_k127_415739_33 COG1403 Restriction endonuclease - - - 0.0000000000000000000000000000000002695 134.0
SYD1_k127_415739_34 - - - - 0.000000000000000000000000000000002944 133.0
SYD1_k127_415739_35 Protein of unknown function (DUF3617) - - - 0.000000000000000000000000000000009958 138.0
SYD1_k127_415739_36 helix_turn_helix, Arsenical Resistance Operon Repressor K22042 GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000001256 124.0
SYD1_k127_415739_37 - - - - 0.00000000000000000000000006413 115.0
SYD1_k127_415739_4 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 4.895e-215 691.0
SYD1_k127_415739_5 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 2.918e-213 681.0
SYD1_k127_415739_6 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K08295 - 6.2.1.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003626 571.0
SYD1_k127_415739_7 NADPH:quinone reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 492.0
SYD1_k127_415739_8 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007282 482.0
SYD1_k127_415739_9 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 466.0
SYD1_k127_4166162_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 1.334e-243 764.0
SYD1_k127_4166162_1 Helicase K03722 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 340.0
SYD1_k127_4166162_2 phosphohistidine phosphatase K08296 - - 0.000000000000000000000000000000000000000000004458 172.0
SYD1_k127_4166162_3 Small Multidrug Resistance protein K11741 - - 0.000000000000000000000000000000000000002906 151.0
SYD1_k127_4166162_4 ACT domain K09964 - - 0.00000000000000000000000000384 115.0
SYD1_k127_4183610_0 Peptidase family M3 K01284 - 3.4.15.5 2.149e-285 897.0
SYD1_k127_4183610_1 Glycosyl hydrolase family 47 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 610.0
SYD1_k127_4183610_2 protein conserved in bacteria - - - 0.0000000000000000000000000003546 116.0
SYD1_k127_4243211_0 metallo-beta-lactamase K12574 - - 2.718e-213 671.0
SYD1_k127_4243211_1 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000003027 212.0
SYD1_k127_4243211_2 Protein of unknown function (DUF1467) - - - 0.0000000000000000000000000001088 119.0
SYD1_k127_4247940_0 NADPH quinone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 481.0
SYD1_k127_4247940_1 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 412.0
SYD1_k127_4247940_2 Belongs to the ClpA ClpB family K03694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004274 402.0
SYD1_k127_4247940_3 protein conserved in bacteria K09987 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 348.0
SYD1_k127_4247940_4 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000001367 248.0
SYD1_k127_4247940_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000000000000000001173 113.0
SYD1_k127_4247940_6 Protein of unknown function (DUF1192) - - - 0.0000001146 59.0
SYD1_k127_4387275_0 peptidase S9 K01278 - 3.4.14.5 0.0 1133.0
SYD1_k127_4387275_1 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 620.0
SYD1_k127_4387275_2 Thioredoxin reductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 436.0
SYD1_k127_4387275_3 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 411.0
SYD1_k127_4387275_4 Predicted integral membrane protein (DUF2189) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001765 254.0
SYD1_k127_4387275_5 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000000000000000001443 203.0
SYD1_k127_4387275_6 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000009754 95.0
SYD1_k127_4419254_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 1.001e-275 867.0
SYD1_k127_4419254_1 oxidase, subunit K00425 - 1.10.3.14 1.705e-270 839.0
SYD1_k127_4419254_10 POT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006895 393.0
SYD1_k127_4419254_11 Mandelate racemase muconate lactonizing enzyme K19802 - 5.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 381.0
SYD1_k127_4419254_12 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 356.0
SYD1_k127_4419254_13 COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components K16012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 357.0
SYD1_k127_4419254_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008278 344.0
SYD1_k127_4419254_15 Cro/C1-type HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001 240.0
SYD1_k127_4419254_16 - - - - 0.000000000000000000001732 97.0
SYD1_k127_4419254_17 - - - - 0.000000000000000448 84.0
SYD1_k127_4419254_18 - - - - 0.000000000000005853 82.0
SYD1_k127_4419254_19 oxidoreductase activity, acting on diphenols and related substances as donors K00424 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008152,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0019867,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0071944 1.10.3.14 0.000000000002716 66.0
SYD1_k127_4419254_2 PFAM Glycoside hydrolase 15-related - - - 1.465e-262 824.0
SYD1_k127_4419254_20 PilZ domain - - - 0.00000004154 61.0
SYD1_k127_4419254_21 - - - - 0.0000008879 56.0
SYD1_k127_4419254_22 - - - - 0.00001509 56.0
SYD1_k127_4419254_3 peptidase S10 serine carboxypeptidase - - - 3.359e-236 750.0
SYD1_k127_4419254_4 Beta-lactamase - - - 1.048e-206 662.0
SYD1_k127_4419254_5 oxidase, subunit K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 585.0
SYD1_k127_4419254_6 DEAD DEAH box helicase K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 565.0
SYD1_k127_4419254_7 COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components K16013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004949 449.0
SYD1_k127_4419254_8 Conserved hypothetical protein 698 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 434.0
SYD1_k127_4419254_9 Pfam Sodium calcium exchanger K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 406.0
SYD1_k127_4505545_0 Penicillin-binding Protein K05366 - 2.4.1.129,3.4.16.4 7.659e-272 850.0
SYD1_k127_4505545_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 606.0
SYD1_k127_4505545_10 Protein of unknown function (DUF4230) - - - 0.0000000000000000000000000000000000000000000000000000004049 201.0
SYD1_k127_4505545_11 SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains. - - - 0.0000000000000000000000000000000000000000000009812 173.0
SYD1_k127_4505545_12 Glycosyl transferase family 11 - - - 0.0000000000000000000000000000000000000001616 163.0
SYD1_k127_4505545_13 Staphylococcal nuclease homologue - - - 0.00000000000000000000000000000000000335 141.0
SYD1_k127_4505545_14 Protein of unknown function (FYDLN_acid) - - - 0.000000000000000000000000000000000003874 139.0
SYD1_k127_4505545_15 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000000000000003631 123.0
SYD1_k127_4505545_16 Flp pilus assembly protein, pilin Flp K02651 - - 0.00000000000007962 77.0
SYD1_k127_4505545_17 - - - - 0.0000000000002258 81.0
SYD1_k127_4505545_18 cheY-homologous receiver domain - - - 0.0000000104 62.0
SYD1_k127_4505545_2 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003829 475.0
SYD1_k127_4505545_20 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.00001629 48.0
SYD1_k127_4505545_3 type II and III secretion system protein K02666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003138 455.0
SYD1_k127_4505545_4 collagen metabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005833 437.0
SYD1_k127_4505545_5 Serine aminopeptidase, S33 K18457 - 3.5.1.101 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 395.0
SYD1_k127_4505545_6 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001142 249.0
SYD1_k127_4505545_7 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000006243 248.0
SYD1_k127_4505545_8 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000003495 222.0
SYD1_k127_4505545_9 Domain of unknown function (DUF4112) - - - 0.00000000000000000000000000000000000000000000000000000002239 201.0
SYD1_k127_4579060_0 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005554 480.0
SYD1_k127_4579060_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007002 454.0
SYD1_k127_4579060_2 Domain of unknown function (DUF4136) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001018 239.0
SYD1_k127_4579060_3 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000006395 183.0
SYD1_k127_4579060_4 Exopolysaccharide synthesis ExoD - - - 0.00000000000000000000000000000002151 136.0
SYD1_k127_4597995_0 GDP-mannose 4,6 dehydratase K01784,K08678 - 4.1.1.35,5.1.3.2 2.33e-303 948.0
SYD1_k127_4597995_1 Polysaccharide biosynthesis protein K17947 - 5.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008002 558.0
SYD1_k127_4597995_2 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 548.0
SYD1_k127_4597995_3 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 527.0
SYD1_k127_4597995_4 PFAM NAD-dependent epimerase dehydratase K12454 - 5.1.3.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 486.0
SYD1_k127_4597995_5 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 478.0
SYD1_k127_4597995_6 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 350.0
SYD1_k127_4597995_7 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000192 251.0
SYD1_k127_4597995_8 Histidine phosphatase superfamily (branch 1) - - - 0.0000000000000000000000000000000000000000000000005407 185.0
SYD1_k127_4698405_0 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.0 1148.0
SYD1_k127_4698405_1 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 3.192e-294 907.0
SYD1_k127_4698405_10 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758 - 4.2.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003394 288.0
SYD1_k127_4698405_11 methylmalonyl-CoA epimerase K05606 - 5.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000002458 245.0
SYD1_k127_4698405_12 transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000915 205.0
SYD1_k127_4698405_13 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000008547 191.0
SYD1_k127_4698405_14 Putative inner membrane exporter, YdcZ K09936 - - 0.0000000000000000000000000000000000000000004703 166.0
SYD1_k127_4698405_15 Belongs to the UPF0335 family - - - 0.000000000000000000000000000008252 120.0
SYD1_k127_4698405_16 - - - - 0.00000000000000000000007605 111.0
SYD1_k127_4698405_17 - - - - 0.000402 50.0
SYD1_k127_4698405_2 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 6.577e-271 851.0
SYD1_k127_4698405_3 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 1.426e-213 673.0
SYD1_k127_4698405_4 UDP-galactopyranose mutase K01854 - 5.4.99.9 2.927e-196 627.0
SYD1_k127_4698405_5 acetyl propionyl-CoA carboxylase, alpha subunit K01965 - 6.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009782 559.0
SYD1_k127_4698405_6 UDP-galactopyranose mutase K01854 - 5.4.99.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 507.0
SYD1_k127_4698405_7 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009723 453.0
SYD1_k127_4698405_8 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 370.0
SYD1_k127_4698405_9 Phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 362.0
SYD1_k127_4724882_0 FAD linked - - - 8.632e-195 617.0
SYD1_k127_4724882_1 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000000000000009302 210.0
SYD1_k127_4724882_2 Arginine repressor, DNA binding domain K03402 - - 0.000000000000000000000000000000005962 134.0
SYD1_k127_4724882_3 - - - - 0.0000000000000000000000000000001129 130.0
SYD1_k127_4740445_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 1.087e-292 918.0
SYD1_k127_4740445_1 Glycine dehydrogenase (aminomethyl-transferring) K00283 - 1.4.4.2 2.989e-278 874.0
SYD1_k127_4740445_10 Glycine cleavage system T protein K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 486.0
SYD1_k127_4740445_11 Pilus assembly protein CpaB K02279 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006032 455.0
SYD1_k127_4740445_12 pilus assembly protein TadB K12510 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004928 436.0
SYD1_k127_4740445_13 Oxidoreductase K19746 - 1.4.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 402.0
SYD1_k127_4740445_14 ABC transporter K01990 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 388.0
SYD1_k127_4740445_15 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 367.0
SYD1_k127_4740445_16 Adenylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000923 379.0
SYD1_k127_4740445_17 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 334.0
SYD1_k127_4740445_18 protein conserved in bacteria K09973 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006638 328.0
SYD1_k127_4740445_19 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 329.0
SYD1_k127_4740445_2 Flp pilus assembly protein, ATPase CpaE K02282 - - 1.606e-232 723.0
SYD1_k127_4740445_20 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 307.0
SYD1_k127_4740445_21 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 299.0
SYD1_k127_4740445_22 gag-polyprotein putative aspartyl protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007229 280.0
SYD1_k127_4740445_23 Protein of unknown function (DUF938) - - - 0.000000000000000000000000000000000000000000000000000000000000000000007623 239.0
SYD1_k127_4740445_24 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000004512 234.0
SYD1_k127_4740445_25 Pilus assembly protein CpaD K02281 - - 0.000000000000000000000000000000000000000000000000000000000000000002543 235.0
SYD1_k127_4740445_26 - - - - 0.000000000000000000000000000000000000000000000000000000000000001489 225.0
SYD1_k127_4740445_27 PilZ domain - - - 0.00000000000000000000000000000000000000000000000000000004155 204.0
SYD1_k127_4740445_28 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000000000001374 194.0
SYD1_k127_4740445_29 protein conserved in bacteria K09973 - - 0.0000000000000000000000000000000000000000000000003196 185.0
SYD1_k127_4740445_3 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 2.312e-219 694.0
SYD1_k127_4740445_30 Protein of unknown function (DUF1453) - - - 0.0000000000000000000000000000000000000000007021 162.0
SYD1_k127_4740445_31 peptidase K02278 - 3.4.23.43 0.0000000000000000000000000000000000000001015 156.0
SYD1_k127_4740445_33 Tetratricopeptide repeat - - - 0.00000000000000000000000000008168 123.0
SYD1_k127_4740445_4 type II secretion system protein K12511 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 527.0
SYD1_k127_4740445_5 Belongs to the GSP D family K02280 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005445 524.0
SYD1_k127_4740445_6 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006449 513.0
SYD1_k127_4740445_7 Domain of unknown function (DUF5117) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 516.0
SYD1_k127_4740445_8 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 510.0
SYD1_k127_4740445_9 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 489.0
SYD1_k127_4745933_0 MacB-like periplasmic core domain K02004 - - 0.0 1029.0
SYD1_k127_4745933_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 1.118e-279 871.0
SYD1_k127_4745933_10 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 335.0
SYD1_k127_4745933_11 NAD(P)H-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 322.0
SYD1_k127_4745933_12 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001537 248.0
SYD1_k127_4745933_13 Serine/threonine phosphatases, family 2C, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000005934 237.0
SYD1_k127_4745933_14 DNA mediated transformation - - - 0.000000000000000000000000000000000000002347 158.0
SYD1_k127_4745933_15 cytochrome - - - 0.0000000000000000000000000000000000001276 151.0
SYD1_k127_4745933_16 Protein of unknown function (DUF1622) - - - 0.000000000000000000000000000000001619 133.0
SYD1_k127_4745933_17 Barrel-sandwich domain of CusB or HlyD membrane-fusion K15727 - - 0.00000000000000000000000000000512 133.0
SYD1_k127_4745933_18 Cold-shock protein K03704 - - 0.000000000000000000000006884 108.0
SYD1_k127_4745933_19 - - - - 0.00003837 49.0
SYD1_k127_4745933_2 outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007103 597.0
SYD1_k127_4745933_3 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 562.0
SYD1_k127_4745933_4 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007194 554.0
SYD1_k127_4745933_5 PFAM alpha beta hydrolase fold K00433 - 1.11.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 531.0
SYD1_k127_4745933_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 482.0
SYD1_k127_4745933_7 Adenylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000511 407.0
SYD1_k127_4745933_8 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005273 373.0
SYD1_k127_4745933_9 AraC family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003325 366.0
SYD1_k127_4773287_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 0.0 1216.0
SYD1_k127_4773287_1 helicase K03724 - - 2.852e-300 929.0
SYD1_k127_4773287_2 Malic enzyme K00029 - 1.1.1.40 8.014e-249 775.0
SYD1_k127_4773287_3 Esterase PHB depolymerase K03932 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005223 314.0
SYD1_k127_4773287_4 PIN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001359 269.0
SYD1_k127_4773287_5 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000454 213.0
SYD1_k127_4773287_6 transcriptional - - - 0.00000000000000000000000000000000000000000000000001721 185.0
SYD1_k127_4773287_7 - - - - 0.000000000000000000000000000000000000000000005062 169.0
SYD1_k127_4773287_8 - - - - 0.000000000000007283 79.0
SYD1_k127_4808074_0 Serine carboxypeptidase - - - 5.722e-218 686.0
SYD1_k127_4808074_1 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 5.992e-204 642.0
SYD1_k127_4808074_10 COG0457 FOG TPR repeat - - - 0.00000000000000000000005944 99.0
SYD1_k127_4808074_2 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 4.097e-197 618.0
SYD1_k127_4808074_3 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 535.0
SYD1_k127_4808074_4 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 513.0
SYD1_k127_4808074_5 Alpha Beta K07018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 416.0
SYD1_k127_4808074_6 Threonine dehydratase K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 389.0
SYD1_k127_4808074_7 Major Facilitator K03762 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005444 394.0
SYD1_k127_4808074_8 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 335.0
SYD1_k127_4808074_9 MAPEG family - - - 0.000000000000000000000000000000000103 145.0
SYD1_k127_4839292_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 2.238e-227 714.0
SYD1_k127_4839292_1 Aromatic amino acid lyase K01745 - 4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009126 525.0
SYD1_k127_4839292_2 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.00000000000003688 81.0
SYD1_k127_4843610_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 9.012e-242 753.0
SYD1_k127_4843610_1 5-aminolevulinic acid synthase K00643 - 2.3.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 402.0
SYD1_k127_4843610_2 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 360.0
SYD1_k127_4843610_3 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000001607 230.0
SYD1_k127_4919170_0 highly regulated protein controlled by the addition removal of adenylyl groups by adenylyltransferase from specific tyrosine residues K01915 - 6.3.1.2 3.8e-274 849.0
SYD1_k127_4919170_1 amino acid K03294 - - 1.283e-211 686.0
SYD1_k127_4919170_2 protein conserved in bacteria K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004605 427.0
SYD1_k127_4919170_3 PilZ domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000181 266.0
SYD1_k127_4919170_4 Sulfite exporter TauE/SafE - - - 0.000004763 59.0
SYD1_k127_4942793_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 4.554e-194 613.0
SYD1_k127_4942793_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 530.0
SYD1_k127_4942793_2 COG1253 Hemolysins and related proteins containing CBS domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006205 393.0
SYD1_k127_4942793_3 dioxygenase of extradiol dioxygenase family K06991 - - 0.0000000000000000000000000000000000000000000000000000000004244 210.0
SYD1_k127_4942793_4 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000002219 122.0
SYD1_k127_4942793_5 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.000000003735 58.0
SYD1_k127_4977713_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 1.203e-308 966.0
SYD1_k127_4977713_1 Cation transporter/ATPase, N-terminus K01531,K01535 - 3.6.3.2,3.6.3.6 2.602e-294 927.0
SYD1_k127_4977713_10 Protein required for attachment to host cells - - - 0.0000000000000000000000000000004675 132.0
SYD1_k127_4977713_11 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000001154 123.0
SYD1_k127_4977713_12 TonB dependent receptor K02014 - - 0.00000000000009811 77.0
SYD1_k127_4977713_13 Domain of unknown function (DUF4880) - - - 0.0000000000007292 79.0
SYD1_k127_4977713_2 4Fe-4S dicluster domain K00184 - - 4.278e-279 888.0
SYD1_k127_4977713_3 Thymidine phosphorylase K00758 - 2.4.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003572 572.0
SYD1_k127_4977713_4 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007142 278.0
SYD1_k127_4977713_5 N-terminal domain of ribose phosphate pyrophosphokinase K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006769 273.0
SYD1_k127_4977713_6 short-chain dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001988 256.0
SYD1_k127_4977713_7 May be involved in the transport of PQQ or its precursor to the periplasm - - - 0.00000000000000000000000000000000000000000000000000000000000000000285 235.0
SYD1_k127_4977713_8 Uncharacterized conserved protein (DUF2267) - - - 0.00000000000000000000000000000000000000000000000002952 184.0
SYD1_k127_4977713_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000003221 133.0
SYD1_k127_5002051_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 585.0
SYD1_k127_5002051_1 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692 482.0
SYD1_k127_5002051_2 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 453.0
SYD1_k127_5002051_3 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004669 411.0
SYD1_k127_5002051_4 HlyD family secretion protein K01993 - - 0.000000000000000000000000000000000000000000000000000001123 200.0
SYD1_k127_5002051_5 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000002529 184.0
SYD1_k127_5002051_6 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000000000000000002475 120.0
SYD1_k127_5003725_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.991e-282 894.0
SYD1_k127_5003725_1 peptidase U62, modulator of DNA gyrase K03568 - - 5.955e-241 751.0
SYD1_k127_5003725_2 ABC-type multidrug transport system, ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009931 487.0
SYD1_k127_5003725_3 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000001272 199.0
SYD1_k127_5003725_4 protein conserved in bacteria - - - 0.000000000000000000000003333 102.0
SYD1_k127_5003725_5 Domain of unknown function (DUF4402) - - - 0.000000000000009863 81.0
SYD1_k127_5003725_6 Domain of unknown function (DUF4402) - - - 0.00000000000002491 80.0
SYD1_k127_5003725_7 protein conserved in bacteria - - - 0.0000000000001162 72.0
SYD1_k127_5003725_8 Putative prokaryotic signal transducing protein - - - 0.000002004 59.0
SYD1_k127_5014116_0 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889 570.0
SYD1_k127_5014116_1 Histidine-specific methyltransferase, SAM-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 406.0
SYD1_k127_5014116_2 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003299 283.0
SYD1_k127_5014116_3 integral membrane protein K02221 - - 0.00000000000000000000000159 106.0
SYD1_k127_5105555_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 3.631e-215 677.0
SYD1_k127_5105555_1 peptidylprolyl isomerase K01802,K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005533 508.0
SYD1_k127_5105555_2 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004988 327.0
SYD1_k127_5105555_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 291.0
SYD1_k127_5105555_4 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000006182 256.0
SYD1_k127_5105555_5 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.000000000000000000000000000000000000000000000006666 173.0
SYD1_k127_5125749_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 8.165e-256 797.0
SYD1_k127_5125749_1 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003257 434.0
SYD1_k127_5125749_2 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006536 290.0
SYD1_k127_5125749_3 ribonuclease E activity - - - 0.0000000000000000000000000000000000000000000000000000000000000001441 232.0
SYD1_k127_5125749_4 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000000000000000009418 160.0
SYD1_k127_5125749_5 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.0000000000000001839 84.0
SYD1_k127_5125749_6 Resolvase - - - 0.0000002514 55.0
SYD1_k127_5127478_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 1.85e-198 638.0
SYD1_k127_5127478_1 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 324.0
SYD1_k127_5127478_2 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 309.0
SYD1_k127_5127478_3 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000358 243.0
SYD1_k127_5127478_4 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000000000000000000000000000000000000000009397 190.0
SYD1_k127_5127478_5 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000000002243 133.0
SYD1_k127_5127478_6 - - - - 0.000000000000000000000000000007955 121.0
SYD1_k127_5138196_0 Histidine kinase - - - 8.044e-293 920.0
SYD1_k127_5138196_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 359.0
SYD1_k127_5144297_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 4.395e-307 953.0
SYD1_k127_5144297_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 2.819e-197 625.0
SYD1_k127_5144297_10 Cys/Met metabolism PLP-dependent enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 324.0
SYD1_k127_5144297_11 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 312.0
SYD1_k127_5144297_12 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003584 305.0
SYD1_k127_5144297_13 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002416 276.0
SYD1_k127_5144297_14 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003606 271.0
SYD1_k127_5144297_15 MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000008394 201.0
SYD1_k127_5144297_16 Biopolymer transport protein K03559 - - 0.0000000000000000000000000000000000000000000000000000001374 197.0
SYD1_k127_5144297_17 Biopolymer transport protein ExbD/TolR K03559 - - 0.000000000000000000000000000000000000000000000000000001346 196.0
SYD1_k127_5144297_18 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000001985 169.0
SYD1_k127_5144297_19 Trypsin - - - 0.000000000000004841 87.0
SYD1_k127_5144297_2 Chloride channel K03281 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000578 620.0
SYD1_k127_5144297_3 Belongs to the GPI family K01810 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009246 577.0
SYD1_k127_5144297_4 amino acid transport K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006789 490.0
SYD1_k127_5144297_5 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009483 415.0
SYD1_k127_5144297_6 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008471 413.0
SYD1_k127_5144297_7 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000474 400.0
SYD1_k127_5144297_8 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007805 366.0
SYD1_k127_5144297_9 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 342.0
SYD1_k127_5151356_0 4Fe-4S dicluster domain - - - 0.0 1074.0
SYD1_k127_5151356_1 Oxidoreductase - - - 3.858e-262 818.0
SYD1_k127_5151356_2 Belongs to the TPP enzyme family K00156,K00158 - 1.2.3.3,1.2.5.1 2.38e-257 820.0
SYD1_k127_5151356_3 Cytochrome C and Quinol oxidase polypeptide I K02274 - 1.9.3.1 1.021e-208 674.0
SYD1_k127_5151356_4 Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000528 423.0
SYD1_k127_5151356_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 376.0
SYD1_k127_5151356_6 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 372.0
SYD1_k127_5151356_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000001189 230.0
SYD1_k127_5151356_8 Gluconate 2-dehydrogenase subunit 3 - - - 0.0000000000000000000000000000000000000000000000000000000000004871 229.0
SYD1_k127_5151356_9 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.00000000000000000000000000000000000002016 158.0
SYD1_k127_5241768_0 type IV secretion system K20530 - - 0.0 1219.0
SYD1_k127_5241768_1 transfer protein trbL K07344 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005224 544.0
SYD1_k127_5241768_2 Conjugal transfer protein TrbB K20527 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 481.0
SYD1_k127_5241768_3 Conjugal transfer protein TrbF K20531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 355.0
SYD1_k127_5241768_4 transfer protein TrbG K20532 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007916 284.0
SYD1_k127_5241768_5 transfer protein TrbJ K20266 - - 0.000000000000000000000000000000000000000000000000000000000001717 228.0
SYD1_k127_5241768_6 Conjugal transfer protein TrbC K20528 - - 0.000000000000000000000000000000000000000008363 159.0
SYD1_k127_5241768_7 Type IV secretory pathway, VirB10 K20533 - - 0.0000000000000000000000000000000006802 138.0
SYD1_k127_5241768_8 Type IV secretory pathway, VirB3-like protein K20529 - - 0.0000000000000000000000000002055 121.0
SYD1_k127_5241768_9 Type IV secretory system Conjugative DNA transfer K03205 - - 0.0000000000000000000002559 101.0
SYD1_k127_5445926_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005696 464.0
SYD1_k127_5445926_1 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008126 409.0
SYD1_k127_5445926_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006147 281.0
SYD1_k127_5445926_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000008729 200.0
SYD1_k127_5445926_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.0000000000000000000000000000002577 126.0
SYD1_k127_5445926_5 In Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media - - - 0.00000000000000000006546 95.0
SYD1_k127_5445926_6 protein secretion K03116 - - 0.000000000000000001188 88.0
SYD1_k127_5484647_0 DNA helicase K03657 - 3.6.4.12 0.0 1220.0
SYD1_k127_5484647_1 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 301.0
SYD1_k127_5484647_2 formate transmembrane transporter activity K06212,K21990,K21993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008027 260.0
SYD1_k127_5484647_3 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000003285 196.0
SYD1_k127_5484647_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000001033 96.0
SYD1_k127_5484647_5 PFAM blue (type 1) copper domain protein - - - 0.000000002453 63.0
SYD1_k127_5657611_0 poly(R)-hydroxyalkanoic acid synthase K03821 - - 7.359e-276 859.0
SYD1_k127_5657611_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 1.124e-232 724.0
SYD1_k127_5657611_10 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001869 271.0
SYD1_k127_5657611_11 Hydrolase K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000005217 264.0
SYD1_k127_5657611_12 Domain of unknown function (DUF4893) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001486 260.0
SYD1_k127_5657611_13 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000000000000000000000002353 195.0
SYD1_k127_5657611_14 Phasin protein - - - 0.000000000000000000000000000000000000001067 158.0
SYD1_k127_5657611_15 - - - - 0.000000000000000000000000000000000000005265 152.0
SYD1_k127_5657611_16 lactoylglutathione lyase activity K00941,K01724,K01759,K07032,K08234 - 2.7.1.49,2.7.4.7,4.2.1.96,4.4.1.5 0.000000000000000000000000000002254 124.0
SYD1_k127_5657611_17 -acetyltransferase K03826,K03827,K18816 - 2.3.1.82 0.000000000000000000000001267 108.0
SYD1_k127_5657611_18 membrane - - - 0.0000000000000000000005935 98.0
SYD1_k127_5657611_19 Acetyltransferase (GNAT) family - - - 0.0000000000000000002491 99.0
SYD1_k127_5657611_2 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000411 606.0
SYD1_k127_5657611_3 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004143 590.0
SYD1_k127_5657611_4 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 499.0
SYD1_k127_5657611_5 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 468.0
SYD1_k127_5657611_6 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004725 377.0
SYD1_k127_5657611_7 RarD protein K05786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008072 349.0
SYD1_k127_5657611_8 UPF0126 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 296.0
SYD1_k127_5657611_9 Chaperone required for the assembly of the mitochondrial F1-ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000329 294.0
SYD1_k127_5744472_0 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 468.0
SYD1_k127_5744472_1 SMART AAA ATPase K08482 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 385.0
SYD1_k127_5792236_0 Belongs to the glycosyl hydrolase 31 family K01811 - 3.2.1.177 0.0 1134.0
SYD1_k127_5792236_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1092.0
SYD1_k127_5792236_10 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005138 360.0
SYD1_k127_5792236_11 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000001278 237.0
SYD1_k127_5792236_12 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.000000000000000000000000000000000000000000000000000000000000131 218.0
SYD1_k127_5792236_13 - - - - 0.000000000000000000773 96.0
SYD1_k127_5792236_14 fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000504 70.0
SYD1_k127_5792236_2 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 1.169e-279 878.0
SYD1_k127_5792236_3 Alpha-L-fucosidase K01206 - 3.2.1.51 4.225e-226 713.0
SYD1_k127_5792236_4 Alpha galactosidase A C-terminal beta sandwich domain K07407 - 3.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 580.0
SYD1_k127_5792236_5 Na -driven multidrug efflux pump - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 579.0
SYD1_k127_5792236_6 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006526 553.0
SYD1_k127_5792236_7 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236 521.0
SYD1_k127_5792236_8 Peptidase family S58 K01266 - 3.4.11.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 488.0
SYD1_k127_5792236_9 Cellulase (glycosyl hydrolase family 5) K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 402.0
SYD1_k127_5795427_0 2-nitropropane dioxygenase - - - 9.381e-280 864.0
SYD1_k127_5795427_1 Belongs to the NadC ModD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 397.0
SYD1_k127_5795427_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 360.0
SYD1_k127_5795427_3 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 289.0
SYD1_k127_5795427_4 Methanol dehydrogenase K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000759 292.0
SYD1_k127_5795427_5 Nudix hydrolase K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000000000000000001225 223.0
SYD1_k127_5795427_6 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000002275 206.0
SYD1_k127_5795427_7 membrane K08988 - - 0.00000000000000000000000000000000000000000000000000000001179 207.0
SYD1_k127_5795427_8 Endoribonuclease L-PSP K10013 - - 0.0000000000000000000000000000000000007801 144.0
SYD1_k127_5852664_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1131.0
SYD1_k127_5852664_1 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006827 495.0
SYD1_k127_5852664_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 445.0
SYD1_k127_5852664_3 amino acid aldolase or racemase K20757 - 4.3.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005803 384.0
SYD1_k127_5852664_4 Voltage-dependent anion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008661 351.0
SYD1_k127_5852664_5 Protein of unknown function (DUF2490) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002035 274.0
SYD1_k127_5852664_6 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000002341 143.0
SYD1_k127_5852664_7 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K13642 - - 0.0000000000000000000000004063 114.0
SYD1_k127_5896090_0 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase K06147 - - 3.669e-253 795.0
SYD1_k127_5896090_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 452.0
SYD1_k127_5896090_2 - - - - 0.000000000000001454 79.0
SYD1_k127_5991086_0 Peptidase family M13 K07386 - - 0.0 1010.0
SYD1_k127_5991086_1 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 3.378e-299 923.0
SYD1_k127_5991086_2 Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA K00253 - 1.3.8.4 1.995e-211 661.0
SYD1_k127_5991086_3 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 574.0
SYD1_k127_6049043_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0 1185.0
SYD1_k127_6049043_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.0 1150.0
SYD1_k127_6049043_10 Uncharacterized protein conserved in bacteria (DUF2334) K06986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004844 274.0
SYD1_k127_6049043_11 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001153 244.0
SYD1_k127_6049043_12 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000000000000000000000000000000000000000004451 242.0
SYD1_k127_6049043_13 Protein of unknown function (DUF1203) - - - 0.0000000000000000000000000000000000000000000001876 173.0
SYD1_k127_6049043_14 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000004536 141.0
SYD1_k127_6049043_15 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000002435 134.0
SYD1_k127_6049043_16 Polynucleotide adenylyltransferase K00970 - 2.7.7.19 0.00000000000000000000009304 100.0
SYD1_k127_6049043_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 6.924e-299 922.0
SYD1_k127_6049043_3 Chloride channel protein - - - 2.731e-257 805.0
SYD1_k127_6049043_4 GGDEF domain - - - 5.813e-253 796.0
SYD1_k127_6049043_5 Belongs to the SAICAR synthetase family K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 478.0
SYD1_k127_6049043_6 Glycosyltransferase Family 4 K14335 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 427.0
SYD1_k127_6049043_7 Metal binding domain of Ada K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008132 424.0
SYD1_k127_6049043_8 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009112 404.0
SYD1_k127_6049043_9 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000286 362.0
SYD1_k127_6116731_0 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 434.0
SYD1_k127_6116731_1 molecular chaperone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 437.0
SYD1_k127_6116731_2 ribonuclease BN K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 418.0
SYD1_k127_6116731_3 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005212 398.0
SYD1_k127_6116731_4 PhzC PhzF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007233 340.0
SYD1_k127_6116731_5 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008814 299.0
SYD1_k127_6116731_6 Domain of unknown function (DUF4440) - - - 0.00000000000000000000000000000000000000000000000000000003036 204.0
SYD1_k127_6116731_7 alpha/beta hydrolase fold K00641 - 2.3.1.31 0.000000000000000000000000000000001565 132.0
SYD1_k127_6160_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009699 513.0
SYD1_k127_6160_1 Natural resistance-associated macrophage protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 495.0
SYD1_k127_6160_10 PFAM PilT protein - - - 0.000000000000000000000000000000000000000000000000005247 184.0
SYD1_k127_6160_11 DNA-binding protein K11940 - - 0.000000000000000000000000000000000000000000000001455 176.0
SYD1_k127_6160_12 small integral membrane protein - - - 0.00000000000000000000000000000000000000000000003309 173.0
SYD1_k127_6160_13 structural constituent of ribosome K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000954 149.0
SYD1_k127_6160_14 protein, YerC YecD - - - 0.00000000000000000000000000000000001798 138.0
SYD1_k127_6160_15 nitrogen fixation sensor protein fixL K14986 - 2.7.13.3 0.00000000000000000000000000003097 120.0
SYD1_k127_6160_16 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.00000000000000000000000000009122 116.0
SYD1_k127_6160_17 - - - - 0.000000000000000000000000008079 121.0
SYD1_k127_6160_18 - - - - 0.000000000000000000000008128 105.0
SYD1_k127_6160_19 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.0000000000000000003818 89.0
SYD1_k127_6160_2 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007126 442.0
SYD1_k127_6160_20 Recombinase zinc beta ribbon domain - - - 0.00000000008601 69.0
SYD1_k127_6160_21 Transposase - - - 0.00000004085 55.0
SYD1_k127_6160_22 transposition K07497 - - 0.0000001777 56.0
SYD1_k127_6160_3 Predicted metal-dependent hydrolase K07044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005907 371.0
SYD1_k127_6160_4 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007918 349.0
SYD1_k127_6160_5 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000001799 250.0
SYD1_k127_6160_6 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000002733 237.0
SYD1_k127_6160_7 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.000000000000000000000000000000000000000000000000000000000000001455 225.0
SYD1_k127_6160_8 PIN domain K07064 - - 0.000000000000000000000000000000000000000000000000000003525 194.0
SYD1_k127_6160_9 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.0000000000000000000000000000000000000000000000000002816 191.0
SYD1_k127_6203471_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 9.359e-290 899.0
SYD1_k127_6203471_1 protein conserved in bacteria - - - 9.05e-248 785.0
SYD1_k127_6203471_10 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.0000001669 55.0
SYD1_k127_6203471_2 Protein conserved in bacteria - - - 1.416e-240 758.0
SYD1_k127_6203471_3 Histidine kinase K14980 - 2.7.13.3 6.019e-198 631.0
SYD1_k127_6203471_4 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 471.0
SYD1_k127_6203471_5 COG0330 Membrane protease subunits, stomatin prohibitin homologs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751 463.0
SYD1_k127_6203471_6 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K14981 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004753 365.0
SYD1_k127_6203471_7 - - - - 0.000000000000000000000000000000000000000000000000000004167 195.0
SYD1_k127_6203471_8 - - - - 0.0000000000000000000000000000000000001164 147.0
SYD1_k127_6203471_9 Membrane protein implicated in regulation of membrane protease activity K07340 - - 0.00000000000000000000000000000000001761 149.0
SYD1_k127_6239234_0 Peptidase family M1 domain - - - 5.044e-279 891.0
SYD1_k127_6239234_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 5.733e-208 652.0
SYD1_k127_6239234_10 Protein involved in meta-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000589 352.0
SYD1_k127_6239234_11 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007064 302.0
SYD1_k127_6239234_12 Bacterial regulatory protein, Fis family K15012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002878 251.0
SYD1_k127_6239234_13 Bacterial transcriptional activator domain - - - 0.00000000000000000000000002837 125.0
SYD1_k127_6239234_14 Thioredoxin-like - - - 0.000000000000000000000008992 115.0
SYD1_k127_6239234_16 - - - - 0.0000000000000000000017 100.0
SYD1_k127_6239234_17 Histidine kinase K15011 - 2.7.13.3 0.000000000000000000002766 96.0
SYD1_k127_6239234_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 566.0
SYD1_k127_6239234_20 - - - - 0.000002814 55.0
SYD1_k127_6239234_21 Site-specific recombinase, DNA invertase Pin - - - 0.00001663 48.0
SYD1_k127_6239234_3 rod shape-determining protein MreB K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 554.0
SYD1_k127_6239234_4 2-nitropropane dioxygenase K02371 - 1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 537.0
SYD1_k127_6239234_5 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006136 402.0
SYD1_k127_6239234_6 Nucleotidyl transferase AbiEii toxin, Type IV TA system K09144 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 384.0
SYD1_k127_6239234_7 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 369.0
SYD1_k127_6239234_8 Dehydrogenase K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003602 371.0
SYD1_k127_6239234_9 COG5285 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 392.0
SYD1_k127_6323278_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00895,K21071 - 2.7.1.11,2.7.1.90 3.454e-199 629.0
SYD1_k127_6323278_1 protein related to capsule biosynthesis enzymes K07154 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 610.0
SYD1_k127_6323278_10 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000000000003086 199.0
SYD1_k127_6323278_11 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000284 180.0
SYD1_k127_6323278_12 Phospholipid methyltransferase - - - 0.0000000000000000000000000000000000000000000009437 171.0
SYD1_k127_6323278_13 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000002206 164.0
SYD1_k127_6323278_14 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.00000000000000000000000000000000000000718 153.0
SYD1_k127_6323278_15 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000005165 131.0
SYD1_k127_6323278_16 small heat shock protein - - - 0.0000000000000000000000000000008809 128.0
SYD1_k127_6323278_17 - - - - 0.000000000000000000000000000009237 124.0
SYD1_k127_6323278_18 Protein of unknown function (DUF502) - - - 0.000000000000000000000008642 109.0
SYD1_k127_6323278_19 Acetyltransferase (GNAT) domain - - - 0.00000000000000001619 90.0
SYD1_k127_6323278_2 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 520.0
SYD1_k127_6323278_20 Protein of unknown function (DUF1326) - - - 0.0000000000001592 81.0
SYD1_k127_6323278_21 Belongs to the thiolase family K00626,K00632,K07550 - 2.3.1.16,2.3.1.9 0.0000000007917 63.0
SYD1_k127_6323278_3 dioxygenase K15777 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 441.0
SYD1_k127_6323278_4 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004353 421.0
SYD1_k127_6323278_5 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007756 416.0
SYD1_k127_6323278_6 Iron dicitrate transport regulator FecR K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008426 357.0
SYD1_k127_6323278_7 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007287 346.0
SYD1_k127_6323278_8 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005672 259.0
SYD1_k127_6323278_9 protein conserved in bacteria K21470 - - 0.000000000000000000000000000000000000000000000000000000001944 209.0
SYD1_k127_633005_0 Major facilitator superfamily K03446 - - 2.524e-214 676.0
SYD1_k127_633005_1 acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 1.309e-209 656.0
SYD1_k127_633005_10 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007493 342.0
SYD1_k127_633005_11 Nucleotidyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008714 325.0
SYD1_k127_633005_12 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002928 296.0
SYD1_k127_633005_13 N-acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002521 249.0
SYD1_k127_633005_14 Belongs to the P(II) protein family K04751 - - 0.00000000000000000000000000000000000000000000000000000004041 198.0
SYD1_k127_633005_15 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000000000003865 159.0
SYD1_k127_633005_16 - - - - 0.00000000000000000000000000004279 117.0
SYD1_k127_633005_17 GcrA cell cycle regulator K13583 - - 0.0000000000000000000000001469 107.0
SYD1_k127_633005_18 - - - - 0.00000000000000000000003572 104.0
SYD1_k127_633005_19 - - - - 0.0000000000000000001775 98.0
SYD1_k127_633005_2 Methionine aminopeptidase K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 499.0
SYD1_k127_633005_21 Belongs to the UPF0235 family K09131 - - 0.00000001782 66.0
SYD1_k127_633005_23 - - - - 0.00005057 48.0
SYD1_k127_633005_24 YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the K09780 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00006424 50.0
SYD1_k127_633005_3 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008118 464.0
SYD1_k127_633005_4 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003219 456.0
SYD1_k127_633005_5 coproporphyrinogen III oxidase K00228 - 1.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 452.0
SYD1_k127_633005_6 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008485 424.0
SYD1_k127_633005_7 Secretion protein, HlyD K03543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006018 387.0
SYD1_k127_633005_8 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 370.0
SYD1_k127_633005_9 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 355.0
SYD1_k127_6385164_0 aminopeptidase K01256 - 3.4.11.2 9.457e-225 711.0
SYD1_k127_6385164_1 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 385.0
SYD1_k127_6385164_2 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008079 283.0
SYD1_k127_6385164_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000000001412 200.0
SYD1_k127_6410735_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 535.0
SYD1_k127_6410735_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000944 405.0
SYD1_k127_6410735_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009251 395.0
SYD1_k127_6410735_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000000000000000000000000000000000000000000000005725 203.0
SYD1_k127_6465101_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1286.0
SYD1_k127_6465101_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 2.841e-254 792.0
SYD1_k127_6465101_10 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 369.0
SYD1_k127_6465101_11 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 317.0
SYD1_k127_6465101_12 Prolyl 4-hydroxylase alpha subunit homologues. K00472 - 1.14.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000031 278.0
SYD1_k127_6465101_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004671 254.0
SYD1_k127_6465101_14 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.00000000000000000000000000000000000000000000007815 178.0
SYD1_k127_6465101_16 leucine-zipper of insertion element IS481 K07497 - - 0.00005441 46.0
SYD1_k127_6465101_2 Heparinase - - - 1.117e-226 714.0
SYD1_k127_6465101_3 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 3.667e-198 629.0
SYD1_k127_6465101_4 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 586.0
SYD1_k127_6465101_5 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 557.0
SYD1_k127_6465101_6 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005325 462.0
SYD1_k127_6465101_7 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000785 458.0
SYD1_k127_6465101_8 beta-lactamase K17836 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000988 424.0
SYD1_k127_6465101_9 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 368.0
SYD1_k127_6483543_0 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003273 437.0
SYD1_k127_6483543_1 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006079 372.0
SYD1_k127_6483543_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 339.0
SYD1_k127_6483543_3 COG0739 Membrane proteins related to metalloendopeptidases K21472 - - 0.00000000000000000000000000000000000000000000000000000000001183 214.0
SYD1_k127_6483543_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000001259 198.0
SYD1_k127_6483543_5 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000347 168.0
SYD1_k127_6483543_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000001238 153.0
SYD1_k127_6483543_7 Prolyl 4-hydroxylase alpha subunit homologues. K00472 - 1.14.11.2 0.0000000000000000000000000000000000000233 155.0
SYD1_k127_6486409_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0 1045.0
SYD1_k127_6486409_1 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 1.019e-248 779.0
SYD1_k127_6486409_2 Outer membrane protein beta-barrel domain - - - 0.0000000000915 75.0
SYD1_k127_6506717_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006975 598.0
SYD1_k127_6506717_1 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 463.0
SYD1_k127_6506717_2 methyltransferase activity K21310 - 2.1.1.334 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 301.0
SYD1_k127_6506717_3 FeS assembly SUF system protein - - - 0.00000000000000000000000000000000000000000000000000000000000000004841 225.0
SYD1_k127_6506717_4 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000000000000000000001973 203.0
SYD1_k127_6520243_0 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 504.0
SYD1_k127_6520243_1 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000343 475.0
SYD1_k127_6520243_2 Electron transfer flavoprotein K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 450.0
SYD1_k127_6520243_3 thiamine kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 410.0
SYD1_k127_6520243_4 Protein of unknown function (DUF1698) K15257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 365.0
SYD1_k127_6520243_5 PFAM Dual specificity - - - 0.00000000000000000000000000000000000000000000000000000008223 201.0
SYD1_k127_6520243_6 Protein of unknwon function (DUF3008) - - - 0.0000000000000003562 80.0
SYD1_k127_6520243_7 Electron transfer flavoprotein K03521 - - 0.000000000000007536 74.0
SYD1_k127_6520243_8 SnoaL-like domain - - - 0.0000000009344 66.0
SYD1_k127_668475_0 Transport of potassium into the cell - - - 1.932e-312 967.0
SYD1_k127_668475_1 Histidine kinase - - - 3.894e-259 827.0
SYD1_k127_668475_10 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003375 270.0
SYD1_k127_668475_11 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000004993 196.0
SYD1_k127_668475_12 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000309 153.0
SYD1_k127_668475_13 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000006494 157.0
SYD1_k127_668475_2 Major facilitator superfamily K03446 - - 1.052e-205 659.0
SYD1_k127_668475_3 RND efflux system, outer membrane lipoprotein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 531.0
SYD1_k127_668475_4 Secretion protein, HlyD K03543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004833 411.0
SYD1_k127_668475_5 Osmosensitive K channel K07646 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 402.0
SYD1_k127_668475_6 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005965 387.0
SYD1_k127_668475_7 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005151 334.0
SYD1_k127_668475_8 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001298 280.0
SYD1_k127_668475_9 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007092 272.0
SYD1_k127_6733197_0 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 2.144e-219 688.0
SYD1_k127_6733197_1 Glycosyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 566.0
SYD1_k127_6733197_10 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000009099 150.0
SYD1_k127_6733197_11 YjbR - - - 0.00000000000000000000000000000005242 136.0
SYD1_k127_6733197_12 positive regulation of macromolecule biosynthetic process K03973 - - 0.00000000000000000000003184 104.0
SYD1_k127_6733197_13 - - - - 0.00000000000001138 82.0
SYD1_k127_6733197_14 Phage shock protein A K03969 - - 0.00000000000001905 74.0
SYD1_k127_6733197_15 - - - - 0.000004162 58.0
SYD1_k127_6733197_16 Protein of unknown function (DUF2568) - - - 0.0001251 51.0
SYD1_k127_6733197_2 Threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003134 562.0
SYD1_k127_6733197_3 Conserved TM helix - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007012 559.0
SYD1_k127_6733197_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004281 430.0
SYD1_k127_6733197_5 exodeoxyribonuclease III K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007787 380.0
SYD1_k127_6733197_6 cation diffusion facilitator family transporter K16264 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 330.0
SYD1_k127_6733197_7 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007712 286.0
SYD1_k127_6733197_8 transcriptional - - - 0.0000000000000000000000000000000000000000000000000000005097 199.0
SYD1_k127_6733197_9 Uracil-DNA glycosylase superfamily - - - 0.00000000000000000000000000000000000000000001158 166.0
SYD1_k127_6836163_0 Amidohydrolase family K06015 - 3.5.1.81 2.334e-212 669.0
SYD1_k127_6836163_1 UDP-N-acetylmuramate-alanine ligase K01924 - 6.3.2.8 3.666e-195 618.0
SYD1_k127_6836163_10 - - - - 0.00000000000000000000000000000000000004387 149.0
SYD1_k127_6836163_11 Putative inner membrane exporter, YdcZ - - - 0.0000000000000000000000000000001975 139.0
SYD1_k127_6836163_13 - - - - 0.00000001913 63.0
SYD1_k127_6836163_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 426.0
SYD1_k127_6836163_3 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 360.0
SYD1_k127_6836163_4 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 368.0
SYD1_k127_6836163_5 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004654 346.0
SYD1_k127_6836163_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008173 326.0
SYD1_k127_6836163_7 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005464 276.0
SYD1_k127_6836163_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000006101 228.0
SYD1_k127_6836163_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000009137 220.0
SYD1_k127_6839570_0 COG1014 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, gamma subunit K00174 - 1.2.7.11,1.2.7.3 0.0 1031.0
SYD1_k127_6839570_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.001e-319 993.0
SYD1_k127_6839570_10 - - - - 0.0000000000000000000000000000000000000001117 166.0
SYD1_k127_6839570_11 Nudix hydrolase K01518 - 3.6.1.17 0.00000000000000000000000000000007137 132.0
SYD1_k127_6839570_12 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.00000000000000000005969 91.0
SYD1_k127_6839570_13 cheY-homologous receiver domain - - - 0.000000000000004194 79.0
SYD1_k127_6839570_2 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 575.0
SYD1_k127_6839570_3 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases K01295 - 3.4.17.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004815 522.0
SYD1_k127_6839570_4 exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 431.0
SYD1_k127_6839570_5 PFAM CHAD domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001692 287.0
SYD1_k127_6839570_6 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003617 246.0
SYD1_k127_6839570_7 NIPSNAP - - - 0.0000000000000000000000000000000000000000000000000000000000001384 228.0
SYD1_k127_6839570_8 Bacterial transcriptional repressor C-terminal - - - 0.000000000000000000000000000000000000000000000000006429 190.0
SYD1_k127_6839570_9 arginine N-succinyltransferase K00673 - 2.3.1.109 0.000000000000000000000000000000000000000000000000008542 188.0
SYD1_k127_6845527_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 5.599e-312 972.0
SYD1_k127_6845527_1 Methylmalonate-semialdehyde dehydrogenase K00140 - 1.2.1.18,1.2.1.27 6.92e-295 914.0
SYD1_k127_6845527_10 COG1253 Hemolysins and related proteins containing CBS domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006976 378.0
SYD1_k127_6845527_11 COG0694 Thioredoxin-like proteins and domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001476 276.0
SYD1_k127_6845527_12 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006112 245.0
SYD1_k127_6845527_13 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000007453 237.0
SYD1_k127_6845527_14 dioxygenase of extradiol dioxygenase family K06991 - - 0.00000000000000000000000000000000000000000000000000000000000000865 219.0
SYD1_k127_6845527_15 Flavodoxin-like fold K19784 - - 0.0000000000000000000000000000000000000000000000000000000000001597 218.0
SYD1_k127_6845527_16 peptidase M22 - - - 0.00000000000000000000000000000000000000000000000000000000001321 214.0
SYD1_k127_6845527_17 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000000000000003205 214.0
SYD1_k127_6845527_18 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.000000000000000000000000000000000000000000000000000000001587 204.0
SYD1_k127_6845527_19 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000000000000000000000000000001008 211.0
SYD1_k127_6845527_2 acyl-CoA dehydrogenase K00249 - 1.3.8.7 9.842e-221 687.0
SYD1_k127_6845527_20 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000003215 203.0
SYD1_k127_6845527_21 Acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000003088 201.0
SYD1_k127_6845527_22 DoxX K15977 - - 0.0000000000000000000000000000000000000000000009311 169.0
SYD1_k127_6845527_23 Acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000000000000000000000000907 159.0
SYD1_k127_6845527_24 Cytochrome C' - - - 0.000000000000000000000001748 113.0
SYD1_k127_6845527_25 - - - - 0.0000000000000000001389 104.0
SYD1_k127_6845527_3 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 3.123e-198 626.0
SYD1_k127_6845527_4 Peptidase, M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007097 602.0
SYD1_k127_6845527_5 Phosphate starvation-inducible protein PhoH K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 520.0
SYD1_k127_6845527_6 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 502.0
SYD1_k127_6845527_7 enoyl-CoA hydratase K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 508.0
SYD1_k127_6845527_8 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007085 415.0
SYD1_k127_6845527_9 Belongs to the 3-hydroxyisobutyrate dehydrogenase family K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 408.0
SYD1_k127_6959991_0 helicase K03724 - - 6.234e-311 961.0
SYD1_k127_6959991_1 Zn-dependent dipeptidase, microsomal dipeptidase K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 536.0
SYD1_k127_6959991_2 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007528 355.0
SYD1_k127_6959991_3 ICC-like phosphoesterases K06953 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003927 342.0
SYD1_k127_6959991_4 - - - - 0.000000000000000000000000000000000000000000000002501 180.0
SYD1_k127_6959991_5 component I K01665,K03342 - 2.6.1.85,4.1.3.38 0.000000000000000000000002822 106.0
SYD1_k127_6959991_6 - - - - 0.00000000000000002915 85.0
SYD1_k127_7013004_0 ABC-type transport system involved in Fe-S cluster assembly, permease component K09014 - - 4.489e-275 859.0
SYD1_k127_7013004_1 synthetase K01897 - 6.2.1.3 1.954e-264 826.0
SYD1_k127_7013004_10 Belongs to the class-I aminoacyl-tRNA synthetase family K01894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 346.0
SYD1_k127_7013004_11 Hydrolase K07025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 343.0
SYD1_k127_7013004_12 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 326.0
SYD1_k127_7013004_13 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 300.0
SYD1_k127_7013004_14 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 312.0
SYD1_k127_7013004_15 ABC-type transport system involved in Fe-S cluster assembly, permease component K09015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002085 269.0
SYD1_k127_7013004_16 adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000013 246.0
SYD1_k127_7013004_17 COG0346 Lactoylglutathione lyase and related lyases K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000001418 243.0
SYD1_k127_7013004_18 FeS assembly SUF system protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000003035 239.0
SYD1_k127_7013004_19 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000000000000000000000001152 216.0
SYD1_k127_7013004_2 Subtilase family - - - 4.814e-259 820.0
SYD1_k127_7013004_20 Redoxin - - - 0.0000000000000000000000000000000000000000000007487 171.0
SYD1_k127_7013004_21 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000002007 169.0
SYD1_k127_7013004_22 - - - - 0.0000000000000000000000000003573 118.0
SYD1_k127_7013004_23 - - - - 0.0000000000000000000001393 113.0
SYD1_k127_7013004_24 - - - - 0.0000000000000000002253 91.0
SYD1_k127_7013004_3 gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 5.592e-214 695.0
SYD1_k127_7013004_4 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 595.0
SYD1_k127_7013004_5 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000574 438.0
SYD1_k127_7013004_6 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 435.0
SYD1_k127_7013004_7 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 429.0
SYD1_k127_7013004_8 ABC-type transport system involved in Fe-S cluster assembly, ATPase component K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 392.0
SYD1_k127_7013004_9 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 372.0
SYD1_k127_7043197_0 E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate K00164 - 1.2.4.2 0.0 1501.0
SYD1_k127_7043197_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1016.0
SYD1_k127_7043197_10 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 430.0
SYD1_k127_7043197_11 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 439.0
SYD1_k127_7043197_12 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 371.0
SYD1_k127_7043197_13 protein, possibly involved in aromatic compounds catabolism - - - 0.00000000000000000000000000000000000000000000000000000000000000005087 226.0
SYD1_k127_7043197_14 Alkyl hydroperoxide reductase K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000008887 208.0
SYD1_k127_7043197_15 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.00000000000000000000000000000000000000000001398 168.0
SYD1_k127_7043197_16 drug transmembrane transport K03327 - - 0.0000000000000000000000000000000000000000001322 166.0
SYD1_k127_7043197_18 - - - - 0.0000931 46.0
SYD1_k127_7043197_2 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 3.056e-237 740.0
SYD1_k127_7043197_3 signal peptide peptidase K04773 - - 4.035e-214 681.0
SYD1_k127_7043197_4 Acetylornithine deacetylase Succinyl-diaminopimelate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 605.0
SYD1_k127_7043197_5 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 563.0
SYD1_k127_7043197_6 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006746 543.0
SYD1_k127_7043197_7 AFG1 family ATPase K06916 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 527.0
SYD1_k127_7043197_8 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 524.0
SYD1_k127_7043197_9 In Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003657 454.0
SYD1_k127_7062758_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 3.433e-218 685.0
SYD1_k127_7062758_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003095 523.0
SYD1_k127_7062758_2 membrane metal-binding protein K02238 - - 0.0000000000000000000000000000000000000000000000000000000001067 213.0
SYD1_k127_7076512_0 Elongation factor G, domain IV K02355 - - 2.948e-289 902.0
SYD1_k127_7076512_1 RNA polymerase sigma K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007341 515.0
SYD1_k127_7076512_2 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 428.0
SYD1_k127_7076512_3 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007477 412.0
SYD1_k127_7076512_4 PFAM polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004249 359.0
SYD1_k127_7076512_5 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 345.0
SYD1_k127_7076512_6 Uncharacterised nucleotidyltransferase - - - 0.00000000000000000000000000000000000000000000004608 185.0
SYD1_k127_7076512_7 nucleotide phosphatase activity, acting on free nucleotides - - - 0.0000000000000000000000000008502 126.0
SYD1_k127_7092737_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 8.597e-242 754.0
SYD1_k127_7092737_1 Luciferase-like monooxygenase K17228 - 1.14.14.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 556.0
SYD1_k127_7092737_10 - - - - 0.0000000000000000000000000006581 122.0
SYD1_k127_7092737_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003798 509.0
SYD1_k127_7092737_3 2-methylthioadenine K18707 - 2.8.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 416.0
SYD1_k127_7092737_4 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007415 406.0
SYD1_k127_7092737_5 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004561 359.0
SYD1_k127_7092737_6 probably involved in intracellular septation K06190 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 315.0
SYD1_k127_7092737_7 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.00000000000000000000000000000000000000000000000000001135 197.0
SYD1_k127_7092737_8 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000000000000000000000000000000001222 194.0
SYD1_k127_7092737_9 ABC transporter K01990 - - 0.000000000000000000000000000000000000001803 160.0
SYD1_k127_7130173_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1155.0
SYD1_k127_7130173_1 NADH-quinone oxidoreductase K00336 - 1.6.5.3 0.0 1086.0
SYD1_k127_7130173_10 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 5.342e-212 662.0
SYD1_k127_7130173_11 domain protein - - - 8.294e-205 662.0
SYD1_k127_7130173_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 621.0
SYD1_k127_7130173_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 594.0
SYD1_k127_7130173_14 phosphate transporter K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 526.0
SYD1_k127_7130173_15 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 399.0
SYD1_k127_7130173_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004633 388.0
SYD1_k127_7130173_17 asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006056 375.0
SYD1_k127_7130173_18 NADH dehydrogenase K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002895 356.0
SYD1_k127_7130173_19 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 334.0
SYD1_k127_7130173_2 NADH ubiquinone oxidoreductase subunit K00341 - 1.6.5.3 0.0 1040.0
SYD1_k127_7130173_20 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 317.0
SYD1_k127_7130173_21 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 325.0
SYD1_k127_7130173_22 Phosphate transport regulator K07220 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008701 284.0
SYD1_k127_7130173_23 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000007039 259.0
SYD1_k127_7130173_24 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000009216 200.0
SYD1_k127_7130173_25 Putative MetA-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000000000000007803 206.0
SYD1_k127_7130173_26 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000002924 214.0
SYD1_k127_7130173_27 - - - - 0.000000000000000000000000000000000000000000000000000007252 192.0
SYD1_k127_7130173_28 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000000002388 177.0
SYD1_k127_7130173_29 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000001375 155.0
SYD1_k127_7130173_3 Transferrin receptor-like dimerisation domain - - - 5e-324 1009.0
SYD1_k127_7130173_30 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000000000000005683 152.0
SYD1_k127_7130173_31 DnaK suppressor protein - - - 0.000000000000000000000000000000038 129.0
SYD1_k127_7130173_32 - - - - 0.0000000000000000000000000000704 122.0
SYD1_k127_7130173_33 - - - - 0.0000000000000000000000000005502 124.0
SYD1_k127_7130173_34 Protein of unknown function (DUF1467) - - - 0.000000000000000000000001022 115.0
SYD1_k127_7130173_36 hmm pf01385 K07496 - - 0.00000009573 56.0
SYD1_k127_7130173_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 2.087e-254 792.0
SYD1_k127_7130173_5 metallo-beta-lactamase K12574 - - 5.537e-244 764.0
SYD1_k127_7130173_6 NADH ubiquinone oxidoreductase subunit K00342 - 1.6.5.3 7.61e-240 752.0
SYD1_k127_7130173_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 2.47e-229 720.0
SYD1_k127_7130173_8 Peptidase m28 K01269 - - 1.643e-213 676.0
SYD1_k127_7130173_9 Aminotransferase K14261 - - 2.41e-213 666.0
SYD1_k127_7152205_0 glutamate dehydrogenase K15371 - 1.4.1.2 0.0 1735.0
SYD1_k127_7152205_1 Catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine K01761 - 4.4.1.11 4.44e-229 715.0
SYD1_k127_7152205_10 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 411.0
SYD1_k127_7152205_11 Putative S-adenosyl-L-methionine-dependent methyltransferase K18164 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006182 377.0
SYD1_k127_7152205_12 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004908 347.0
SYD1_k127_7152205_13 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 325.0
SYD1_k127_7152205_14 MobA-like NTP transferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002487 259.0
SYD1_k127_7152205_15 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000001733 188.0
SYD1_k127_7152205_16 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.0000000000000000000000000000000008779 131.0
SYD1_k127_7152205_17 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - 0.00000000000000000000000000000004528 132.0
SYD1_k127_7152205_18 ligase activity - - - 0.00000001556 60.0
SYD1_k127_7152205_19 Ribbon-helix-helix domain - - - 0.0000002392 61.0
SYD1_k127_7152205_2 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 602.0
SYD1_k127_7152205_22 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - 0.0002323 46.0
SYD1_k127_7152205_3 aerobic-type carbon monoxide dehydrogenase, large subunit CoxL K07303 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 531.0
SYD1_k127_7152205_4 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005126 460.0
SYD1_k127_7152205_5 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 465.0
SYD1_k127_7152205_6 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009401 451.0
SYD1_k127_7152205_7 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 454.0
SYD1_k127_7152205_8 Acetoacetyl-CoA reductase K00023 - 1.1.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004579 421.0
SYD1_k127_7152205_9 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 425.0
SYD1_k127_7197651_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 1.316e-267 829.0
SYD1_k127_7197651_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 2.957e-234 732.0
SYD1_k127_7197651_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000001732 114.0
SYD1_k127_7203326_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 5.668e-278 861.0
SYD1_k127_7203326_1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007691 583.0
SYD1_k127_7203326_2 Peptidase M15 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002928 254.0
SYD1_k127_7203326_3 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) - - - 0.0000000000000000000000001448 109.0
SYD1_k127_7279784_0 ERAP1-like C-terminal domain - - - 0.0 1169.0
SYD1_k127_7279784_1 NADH flavin oxidoreductase NADH oxidase K09461 - 1.14.13.40 0.0 1152.0
SYD1_k127_7279784_10 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000003186 217.0
SYD1_k127_7279784_11 AsnC-type helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000008447 174.0
SYD1_k127_7279784_12 Nickel/cobalt transporter regulator - - - 0.000000000000000000000000000001175 132.0
SYD1_k127_7279784_14 PilZ domain - - - 0.000006187 53.0
SYD1_k127_7279784_15 - - - - 0.00055 46.0
SYD1_k127_7279784_2 protein conserved in bacteria - - - 3.747e-255 801.0
SYD1_k127_7279784_3 - - - - 5.823e-222 709.0
SYD1_k127_7279784_4 PFAM L-carnitine dehydratase bile acid-inducible protein F K01796 - 5.1.99.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 383.0
SYD1_k127_7279784_5 PFAM extracellular solute-binding protein, family 3 K16254 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005394 293.0
SYD1_k127_7279784_6 NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 286.0
SYD1_k127_7279784_7 TIGRFAM 40-residue YVTN family beta-propeller repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009692 285.0
SYD1_k127_7279784_8 Serine aminopeptidase, S33 K01055 - 3.1.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000007561 268.0
SYD1_k127_7279784_9 DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000004966 270.0
SYD1_k127_7325017_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 2.225e-213 667.0
SYD1_k127_7325017_1 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 513.0
SYD1_k127_7325017_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 489.0
SYD1_k127_7325017_3 Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000332 401.0
SYD1_k127_7325017_4 CarD family transcriptional regulator K07736 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 310.0
SYD1_k127_7325017_5 Protein of unknown function (DUF1489) - - - 0.0000000000000000000000000000000000000000000000002657 179.0
SYD1_k127_7325017_6 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000000000000000000000001243 127.0
SYD1_k127_7325017_7 Putative auto-transporter adhesin, head GIN domain - - - 0.000000000000002321 87.0
SYD1_k127_7374411_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 0.0 1081.0
SYD1_k127_7374411_1 (ABC) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 462.0
SYD1_k127_7374411_2 cation diffusion facilitator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004806 386.0
SYD1_k127_7374411_3 chemotaxis K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006622 312.0
SYD1_k127_7374411_4 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.000000000000000000000000000000000000000000000000000000000009465 234.0
SYD1_k127_7374411_5 succinate dehydrogenase K00241 - - 0.00000000000000000000000000000000000000000008571 164.0
SYD1_k127_7374411_6 succinate dehydrogenase activity K00242 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000005375 147.0
SYD1_k127_7374411_7 PFAM Cupin 2 conserved barrel domain protein - - - 0.0000000000000001237 80.0
SYD1_k127_7388297_0 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 385.0
SYD1_k127_7388297_1 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007399 311.0
SYD1_k127_7388297_10 Lactoylglutathione lyase K07032 - - 0.00000000000000000000000000000001591 128.0
SYD1_k127_7388297_2 enzyme related to lactoylglutathione lyase K06996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 300.0
SYD1_k127_7388297_3 Protein of unknown function (DUF1428) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001115 274.0
SYD1_k127_7388297_4 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000005621 271.0
SYD1_k127_7388297_5 Glutathione S-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002253 263.0
SYD1_k127_7388297_6 molecular chaperone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007578 250.0
SYD1_k127_7388297_7 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001407 251.0
SYD1_k127_7388297_8 3-demethylubiquinone-9 3-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008424 259.0
SYD1_k127_7388297_9 Belongs to the BolA IbaG family K05527 - - 0.000000000000000000000000000000002099 134.0
SYD1_k127_7448333_0 protein conserved in bacteria K09800 - - 1.428e-295 946.0
SYD1_k127_7448333_1 ABC-type multidrug transport system, ATPase and permease K06147 - - 1.529e-249 782.0
SYD1_k127_7448333_10 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003034 252.0
SYD1_k127_7448333_11 synthesis repressor PhaR - - - 0.0000000000000000000000000000000000000000000000000000000000000009592 225.0
SYD1_k127_7448333_12 DJ-1/PfpI family K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000001151 218.0
SYD1_k127_7448333_13 Serine aminopeptidase, S33 K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000002725 194.0
SYD1_k127_7448333_14 MaoC like domain - - - 0.0000000000000000000000000000000000000000000000001577 199.0
SYD1_k127_7448333_15 - - - - 0.000000000000000000000000000000000000000000006226 168.0
SYD1_k127_7448333_17 - - - - 0.0000000000000000000001589 99.0
SYD1_k127_7448333_18 - - - - 0.00000000000000000008307 100.0
SYD1_k127_7448333_19 - - - - 0.0000000000000002251 83.0
SYD1_k127_7448333_2 de-polymerase K05973 - 3.1.1.75 9.57e-205 642.0
SYD1_k127_7448333_3 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 7e-201 632.0
SYD1_k127_7448333_4 COG0729 Outer membrane protein K07278 - - 2.802e-195 631.0
SYD1_k127_7448333_5 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 548.0
SYD1_k127_7448333_6 DNA topoisomerase K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004503 458.0
SYD1_k127_7448333_7 mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 347.0
SYD1_k127_7448333_8 COG0330 Membrane protease subunits, stomatin prohibitin homologs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 334.0
SYD1_k127_7448333_9 COG3243 Poly(3-hydroxyalkanoate) synthetase K03821 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 292.0
SYD1_k127_745991_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1465.0
SYD1_k127_745991_1 Prolyl oligopeptidase family - - - 2.503e-295 922.0
SYD1_k127_745991_10 Domain of unknown function (DUF4956) - - - 0.0000000000000000000000000000000000000000000000000000000002852 209.0
SYD1_k127_745991_11 Belongs to the CinA family K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000008162 197.0
SYD1_k127_745991_12 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000001654 193.0
SYD1_k127_745991_13 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000000000000000000009334 176.0
SYD1_k127_745991_14 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000008363 159.0
SYD1_k127_745991_15 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000006495 149.0
SYD1_k127_745991_16 Belongs to the Nudix hydrolase family - - - 0.000000000000000000000000000002491 125.0
SYD1_k127_745991_17 Response regulator receiver - - - 0.00000000000000000001642 103.0
SYD1_k127_745991_18 Protein involved in meta-pathway of phenol degradation - - - 0.0000000000005399 74.0
SYD1_k127_745991_2 Peptidase, M28 - - - 1.666e-223 711.0
SYD1_k127_745991_3 polyphosphate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 358.0
SYD1_k127_745991_4 Bacterial protein of unknown function (DUF899) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 350.0
SYD1_k127_745991_5 Protein phosphatase 2A homologues, catalytic domain. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008481 322.0
SYD1_k127_745991_6 Belongs to the BI1 family K06890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 316.0
SYD1_k127_745991_7 dienelactone hydrolase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 306.0
SYD1_k127_745991_8 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000001131 256.0
SYD1_k127_745991_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000367 244.0
SYD1_k127_749353_0 DNA ligase K01971 - 6.5.1.1 0.0 1180.0
SYD1_k127_749353_1 COG2366 Protein related to penicillin acylase K07116 - 3.5.1.97 1.116e-297 929.0
SYD1_k127_749353_10 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006829 384.0
SYD1_k127_749353_11 Belongs to the TrpC family K01609 - 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003578 375.0
SYD1_k127_749353_12 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002571 279.0
SYD1_k127_749353_13 CoA binding domain K06929 - - 0.000000000000000000000000000000000000000000000000000000000000000000002246 237.0
SYD1_k127_749353_14 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000003515 256.0
SYD1_k127_749353_15 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000005572 196.0
SYD1_k127_749353_16 Staphylococcal nuclease homologue - - - 0.000000000000007223 80.0
SYD1_k127_749353_2 glutamate--cysteine ligase K01919 - 6.3.2.2 2.052e-253 786.0
SYD1_k127_749353_3 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 579.0
SYD1_k127_749353_4 modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 504.0
SYD1_k127_749353_5 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 500.0
SYD1_k127_749353_6 Serine aminopeptidase, S33 K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 449.0
SYD1_k127_749353_7 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 404.0
SYD1_k127_749353_8 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 402.0
SYD1_k127_749353_9 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005456 393.0
SYD1_k127_7537848_0 DNA helicase K03657 - 3.6.4.12 0.0 1223.0
SYD1_k127_7537848_1 Domain of unknown function (DUF1330) - - - 0.0000000000000000000000000000000002659 136.0
SYD1_k127_7537848_2 Domain of unknown function (DUF1330) - - - 0.0000000001514 63.0
SYD1_k127_7537848_3 - - - - 0.000003686 51.0
SYD1_k127_7574564_0 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 459.0
SYD1_k127_7574564_1 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 452.0
SYD1_k127_7574564_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000003411 159.0
SYD1_k127_7574564_3 TIR domain - - - 0.0000000000000000000000000000001252 143.0
SYD1_k127_7595431_0 membrane K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 583.0
SYD1_k127_7595431_1 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005136 386.0
SYD1_k127_7595431_2 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000006717 250.0
SYD1_k127_7595431_3 protein-L-isoaspartate K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000002687 213.0
SYD1_k127_7595431_4 - - - - 0.000000000000000000000000000000000000000000000002763 183.0
SYD1_k127_7595431_5 protein conserved in bacteria K09991 - - 0.00000000000000000000000000000000000001846 148.0
SYD1_k127_7617773_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1812.0
SYD1_k127_7617773_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 2.03e-322 998.0
SYD1_k127_7617773_10 SelR domain K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000001479 244.0
SYD1_k127_7617773_11 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004009 244.0
SYD1_k127_7617773_12 membrane protein (homolog of Drosophila rhomboid) - - - 0.0000000000000000000000000000000000000000000000000000000000000000008711 239.0
SYD1_k127_7617773_13 Domain of unknown function (DUF1993) K09983 - - 0.00000000000000000000000000000000000000000000000000000000000000003486 229.0
SYD1_k127_7617773_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000000007273 229.0
SYD1_k127_7617773_15 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000000000000000000000000003045 214.0
SYD1_k127_7617773_16 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000000000000001734 204.0
SYD1_k127_7617773_17 - K03832 - - 0.0000000000000000000000000000000000000001462 161.0
SYD1_k127_7617773_18 Domain of unknown function (DUF4170) - - - 0.000000000000000000000000000001891 121.0
SYD1_k127_7617773_19 - - - - 0.0000000000000000000000002347 112.0
SYD1_k127_7617773_2 GvpD gas vesicle protein K08482 - - 4.171e-203 643.0
SYD1_k127_7617773_21 - - - - 0.000000000000000001244 88.0
SYD1_k127_7617773_22 - - - - 0.0000000000000005877 80.0
SYD1_k127_7617773_23 PspC domain protein - - - 0.00000000000005173 75.0
SYD1_k127_7617773_24 - - - - 0.00003588 48.0
SYD1_k127_7617773_3 Belongs to the CarA family K01956 - 6.3.5.5 3.13e-201 631.0
SYD1_k127_7617773_4 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 541.0
SYD1_k127_7617773_5 methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000379 501.0
SYD1_k127_7617773_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 455.0
SYD1_k127_7617773_7 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 451.0
SYD1_k127_7617773_8 - K18546 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 379.0
SYD1_k127_7617773_9 Trypsin-like peptidase domain K04771,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006508,GO:0006515,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0009987,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030163,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051603,GO:0061077,GO:0070011,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000001346 259.0
SYD1_k127_7759823_0 acyl-CoA dehydrogenase - - - 7.253e-267 833.0
SYD1_k127_7759823_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 1.454e-225 705.0
SYD1_k127_7759823_10 Sodium proton antiporter, NhaD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004509 462.0
SYD1_k127_7759823_11 PFAM major facilitator superfamily MFS_1 K08169 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008894 464.0
SYD1_k127_7759823_12 Na H antiporter K03316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 436.0
SYD1_k127_7759823_13 L,D-transpeptidase catalytic domain K21470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005508 405.0
SYD1_k127_7759823_14 Belongs to the 'phage' integrase family K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 410.0
SYD1_k127_7759823_15 membrane K02351 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 336.0
SYD1_k127_7759823_16 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003054 310.0
SYD1_k127_7759823_17 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000000000000000000000000007291 226.0
SYD1_k127_7759823_18 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000004263 210.0
SYD1_k127_7759823_19 Colicin V production protein K03558 - - 0.00000000000000000000000000000000000000000000000000004356 192.0
SYD1_k127_7759823_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11747 - - 1.824e-206 658.0
SYD1_k127_7759823_20 - - - - 0.0000000000000000000000000000000000000000000000000001033 196.0
SYD1_k127_7759823_21 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000001608 188.0
SYD1_k127_7759823_22 NifU homolog involved in Fe-S cluster formation - - - 0.0000000000000000000000000008972 122.0
SYD1_k127_7759823_23 YCII-related domain K09780 - - 0.000000000000000000000002608 104.0
SYD1_k127_7759823_24 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000003089 94.0
SYD1_k127_7759823_3 COG0477 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 599.0
SYD1_k127_7759823_4 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008112 604.0
SYD1_k127_7759823_5 peptidase M48, Ste24p - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 564.0
SYD1_k127_7759823_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006105 563.0
SYD1_k127_7759823_7 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 521.0
SYD1_k127_7759823_8 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 497.0
SYD1_k127_7759823_9 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 488.0
SYD1_k127_7864507_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 3.539e-318 983.0
SYD1_k127_7864507_1 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332 473.0
SYD1_k127_7864507_2 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008438 447.0
SYD1_k127_7864507_3 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000002486 230.0
SYD1_k127_7864507_4 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.0000000000000000000000000000000000000000000423 162.0
SYD1_k127_7864507_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000001 122.0
SYD1_k127_7868047_0 asparagine synthase K01953 - 6.3.5.4 6.043e-235 745.0
SYD1_k127_7868047_1 Belongs to the glycosyl hydrolase 1 family - - - 5.424e-205 653.0
SYD1_k127_7868047_2 glycosyl transferase family 8 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006653 357.0
SYD1_k127_7868047_3 Cytochrome C and Quinol oxidase polypeptide I K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 289.0
SYD1_k127_7868047_4 Mitochondrial fission ELM1 K07276 - - 0.000000000000000000000000000000000000000000000000000000001832 214.0
SYD1_k127_7868047_5 PFAM cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000002661 180.0
SYD1_k127_7868047_6 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000107 167.0
SYD1_k127_7868047_7 Sulfotransferase domain - - - 0.0000000000000000000000000000000001018 146.0
SYD1_k127_7868047_8 - - - - 0.000000000000000000000000001227 125.0
SYD1_k127_7868047_9 Cytochrome C oxidase, cbb3-type, subunit III K02277 - 1.9.3.1 0.0000000000004321 79.0
SYD1_k127_7968587_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1082.0
SYD1_k127_7968587_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 5.697e-313 978.0
SYD1_k127_7968587_10 Domain of unknown function (DUF4130 K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 301.0
SYD1_k127_7968587_11 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002153 279.0
SYD1_k127_7968587_12 cytochrome C K08738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000256 274.0
SYD1_k127_7968587_13 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001329 254.0
SYD1_k127_7968587_14 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000001095 232.0
SYD1_k127_7968587_15 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000000000000000000000002122 224.0
SYD1_k127_7968587_16 Protein of unknown function (DUF721) - - - 0.000000000000000000000000000000000000000000000000000000001722 220.0
SYD1_k127_7968587_17 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000000000000000000005873 187.0
SYD1_k127_7968587_18 Disulfide bond formation protein - - - 0.000000000000000000000000000000000000000000005162 168.0
SYD1_k127_7968587_19 Membrane-bound metallopeptidase - - - 0.0000000000000000000000000000000000000000002915 176.0
SYD1_k127_7968587_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 1.767e-208 655.0
SYD1_k127_7968587_20 - - - - 0.00000000000000000000000000000007643 130.0
SYD1_k127_7968587_3 amino acid peptide transporter K03305 - - 9.233e-201 634.0
SYD1_k127_7968587_4 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 430.0
SYD1_k127_7968587_5 amino acid peptide transporter K03305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 396.0
SYD1_k127_7968587_6 glycosylase K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 378.0
SYD1_k127_7968587_7 Protein of unknown function (DUF3667) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 329.0
SYD1_k127_7968587_8 Inner membrane protein CreD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 318.0
SYD1_k127_7968587_9 beta-lactamase K17836 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 311.0
SYD1_k127_8028781_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1780.0
SYD1_k127_8028781_1 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1459.0
SYD1_k127_8028781_10 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006831 299.0
SYD1_k127_8028781_11 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000184 292.0
SYD1_k127_8028781_12 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000001097 252.0
SYD1_k127_8028781_13 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000427 229.0
SYD1_k127_8028781_14 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000000000001943 195.0
SYD1_k127_8028781_15 Protein of unknown function (DUF2945) - - - 0.000000000000000000000000000006378 119.0
SYD1_k127_8028781_16 Flavinator of succinate dehydrogenase K09159 - - 0.0000000000000000000000000001023 129.0
SYD1_k127_8028781_17 ATPase or kinase K06925 - - 0.0000000000000000000000000001269 127.0
SYD1_k127_8028781_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1442.0
SYD1_k127_8028781_3 Belongs to the helicase family. UvrD subfamily K16898 - 3.6.4.12 0.0 1061.0
SYD1_k127_8028781_4 helicase K16899 - 3.6.4.12 0.0 1032.0
SYD1_k127_8028781_5 ATP-dependent DNA helicase RecG K03655 - 3.6.4.12 0.0 1009.0
SYD1_k127_8028781_6 Phosphotransferase K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 520.0
SYD1_k127_8028781_7 Reductase C-terminal K05297 - 1.18.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006147 522.0
SYD1_k127_8028781_8 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00992 - 2.7.7.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004779 392.0
SYD1_k127_8028781_9 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007371 362.0
SYD1_k127_8057648_0 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation K13598 - 2.7.13.3 1.189e-236 745.0
SYD1_k127_8057648_1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K13599 - - 1.474e-236 737.0
SYD1_k127_8057648_2 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 574.0
SYD1_k127_8057648_3 MazG family K04765 - 3.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 344.0
SYD1_k127_8057648_4 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000000000000000000000000000000000000000000000007807 192.0
SYD1_k127_8057648_5 gag-polyprotein putative aspartyl protease K06985 - - 0.0000000000001812 70.0
SYD1_k127_8183851_0 glutamate--cysteine ligase K01919 - 6.3.2.2 1.204e-229 718.0
SYD1_k127_8183851_1 Serine aminopeptidase, S33 K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008845 441.0
SYD1_k127_8183851_2 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 396.0
SYD1_k127_8183851_3 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 288.0
SYD1_k127_8183851_4 modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003671 281.0
SYD1_k127_8234122_0 Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2) K01484 - 3.5.3.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007335 593.0
SYD1_k127_8234122_1 arginine N-succinyltransferase K00673 - 2.3.1.109 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 496.0
SYD1_k127_8234122_2 - - - - 0.00000000000000000000002277 104.0
SYD1_k127_8321649_0 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 1.328e-297 937.0
SYD1_k127_8321649_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 590.0
SYD1_k127_8321649_10 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000007 258.0
SYD1_k127_8321649_11 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000911 228.0
SYD1_k127_8321649_12 DNA polymerase III K02339 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000003536 193.0
SYD1_k127_8321649_13 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate - - - 0.000000000000000000000000000000000000008864 154.0
SYD1_k127_8321649_15 - - - - 0.0000000001227 72.0
SYD1_k127_8321649_2 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008138 580.0
SYD1_k127_8321649_3 peptidylprolyl isomerase K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006455 559.0
SYD1_k127_8321649_4 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 529.0
SYD1_k127_8321649_5 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 506.0
SYD1_k127_8321649_6 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 388.0
SYD1_k127_8321649_7 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006215 383.0
SYD1_k127_8321649_8 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003683 374.0
SYD1_k127_8321649_9 ATPase involved in DNA replication - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003956 297.0
SYD1_k127_832885_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.0 1099.0
SYD1_k127_832885_1 Belongs to the glycosyl hydrolase 31 family - - - 0.0 1022.0
SYD1_k127_832885_10 permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007009 499.0
SYD1_k127_832885_11 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006642 501.0
SYD1_k127_832885_12 MFS/sugar transport protein K03292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 499.0
SYD1_k127_832885_13 Major facilitator superfamily K07552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009104 477.0
SYD1_k127_832885_14 helix_turn _helix lactose operon repressor K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 387.0
SYD1_k127_832885_15 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 368.0
SYD1_k127_832885_16 OST-HTH/LOTUS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007801 345.0
SYD1_k127_832885_17 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000075 329.0
SYD1_k127_832885_18 Cell Wall Hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003279 287.0
SYD1_k127_832885_19 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008899 257.0
SYD1_k127_832885_2 Carboxypeptidase regulatory-like domain - - - 2.561e-287 914.0
SYD1_k127_832885_20 3-deoxy-manno-octulosonate cytidylyltransferase K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000008413 254.0
SYD1_k127_832885_21 sugar phosphatases of the HAD superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000004685 247.0
SYD1_k127_832885_22 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000000000000000000001055 201.0
SYD1_k127_832885_23 5-formyltetrahydrofolate cyclo-ligase K01934 - 6.3.3.2 0.000000000000000000000000000000000000000001818 164.0
SYD1_k127_832885_24 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000000000000000000000001185 123.0
SYD1_k127_832885_25 Protein of unknown function (DUF805) - - - 0.00000000000000000000000000007617 128.0
SYD1_k127_832885_26 - - - - 0.00000000000000000000000973 105.0
SYD1_k127_832885_27 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000672 94.0
SYD1_k127_832885_28 - - - - 0.0000000000000000005488 89.0
SYD1_k127_832885_3 Fibronectin type 3 domain - - - 6.325e-254 796.0
SYD1_k127_832885_30 - - - - 0.0000000000000011 83.0
SYD1_k127_832885_32 COG2214 DnaJ-class molecular chaperone - - - 0.000005687 57.0
SYD1_k127_832885_4 Domain of Unknown Function with PDB structure (DUF3857) - - - 1.191e-253 823.0
SYD1_k127_832885_5 Putative glucoamylase - - - 1.761e-228 718.0
SYD1_k127_832885_6 Tryptophan halogenase K14266 - 1.14.19.9 4.402e-208 662.0
SYD1_k127_832885_7 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 8.593e-200 625.0
SYD1_k127_832885_8 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 1.973e-197 623.0
SYD1_k127_832885_9 Belongs to the peptidase M24B family K01271 - 3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 511.0
SYD1_k127_8364915_0 Belongs to the heme-copper respiratory oxidase family - - - 0.0 1169.0
SYD1_k127_8364915_1 Arabinose ABC transporter permease - - - 2.622e-216 678.0
SYD1_k127_8364915_2 ubiquinol oxidase subunit K02297 - 1.10.3.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006542 397.0
SYD1_k127_8364915_3 cytochrome o ubiquinol oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 327.0
SYD1_k127_8364915_4 SURF1-like protein K14998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007734 279.0
SYD1_k127_8364915_5 cytochrome o ubiquinol oxidase K02300 - - 0.0000000000000000000000000001604 134.0
SYD1_k127_8364915_6 Histidine kinase K15011 - 2.7.13.3 0.000000000000000000003135 95.0
SYD1_k127_8364915_7 PFAM Cupin 2 conserved barrel domain protein - - - 0.0001073 46.0
SYD1_k127_8518442_0 phosphomannomutase K01840 - 5.4.2.8 9.954e-231 728.0
SYD1_k127_8518442_1 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007159 552.0
SYD1_k127_8518442_10 Belongs to the ompA family K03640 - - 0.000000000000000000002569 109.0
SYD1_k127_8518442_11 Protein of unknown function (DUF3618) - - - 0.0000002512 58.0
SYD1_k127_8518442_2 involved in chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 401.0
SYD1_k127_8518442_3 Involved in the TonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005756 395.0
SYD1_k127_8518442_4 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 317.0
SYD1_k127_8518442_5 helicase K03724 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 306.0
SYD1_k127_8518442_6 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000001435 233.0
SYD1_k127_8518442_7 thioesterase K07107 - - 0.0000000000000000000000000000000000000000000000000000003713 199.0
SYD1_k127_8518442_8 FOG TPR repeat, SEL1 subfamily K07126 - - 0.00000000000000000000000000000000000000001797 155.0
SYD1_k127_8518442_9 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0000000000000000000007766 103.0
SYD1_k127_8535827_0 helicase K17675 - 3.6.4.13 0.0 1127.0
SYD1_k127_8535827_1 Domain of unknown function DUF87 K06915 - - 1.113e-300 929.0
SYD1_k127_8535827_2 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000001281 217.0
SYD1_k127_8535827_3 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000000000000000000002232 211.0
SYD1_k127_8583007_0 Thiol disulfide interchange protein - - - 7.127e-241 761.0
SYD1_k127_8583007_1 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 1.41e-234 735.0
SYD1_k127_8583007_10 Pseudouridine synthase K06177 - 5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 318.0
SYD1_k127_8583007_11 cation diffusion facilitator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 321.0
SYD1_k127_8583007_12 GAF domain-containing protein K08968 - 1.8.4.14 0.000000000000000000000000000000000000000000000000000000000000000000000002598 253.0
SYD1_k127_8583007_13 Sigma-70, region 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000007262 225.0
SYD1_k127_8583007_14 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000001381 220.0
SYD1_k127_8583007_15 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000001338 185.0
SYD1_k127_8583007_16 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000000000000000001386 166.0
SYD1_k127_8583007_17 acyl-CoA thioester hydrolase K10806 - - 0.000000000000000000000000000000000000000005619 157.0
SYD1_k127_8583007_18 chain release factor K15034 - - 0.000000000000000000000000000000000000000007324 158.0
SYD1_k127_8583007_19 Putative zinc-finger - - - 0.000000000000000000000000000000007756 140.0
SYD1_k127_8583007_2 Metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005847 610.0
SYD1_k127_8583007_3 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002422 594.0
SYD1_k127_8583007_4 Threonine dehydratase K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 575.0
SYD1_k127_8583007_5 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 554.0
SYD1_k127_8583007_6 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K13584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 451.0
SYD1_k127_8583007_7 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006169 447.0
SYD1_k127_8583007_8 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 412.0
SYD1_k127_8583007_9 ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004235 339.0
SYD1_k127_8614732_0 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 583.0
SYD1_k127_8614732_1 alcohol dehydrogenase K07119 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 386.0
SYD1_k127_8614732_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00019 - 1.1.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005902 385.0
SYD1_k127_8614732_3 metalloprotease K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 316.0
SYD1_k127_8614732_4 Domain of unknown function (DUF4893) - - - 0.0000000000000000000000000000000000000000000000000000000006517 209.0
SYD1_k127_8614732_5 Aldo/keto reductase family - - - 0.0004185 44.0
SYD1_k127_8674060_0 Belongs to the ClpA ClpB family K03694 - - 0.0 1264.0
SYD1_k127_8674060_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 598.0
SYD1_k127_8674060_10 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009881 310.0
SYD1_k127_8674060_11 Belongs to the GST superfamily K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003549 297.0
SYD1_k127_8674060_12 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000002771 260.0
SYD1_k127_8674060_13 N-formylglutamate amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007351 254.0
SYD1_k127_8674060_14 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides - - - 0.000000000000000000000000000000000000000000000000000000000000000000003376 240.0
SYD1_k127_8674060_15 response regulator K13589 - - 0.0000000000000000000000000000000000000000000000000000000000000000551 223.0
SYD1_k127_8674060_16 Sulfotransferase family - - - 0.00000000000000000000000000000000000000000000000000000006446 209.0
SYD1_k127_8674060_17 - - - - 0.00000000000000000000000000000000000001007 150.0
SYD1_k127_8674060_18 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000002441 149.0
SYD1_k127_8674060_19 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000000006273 140.0
SYD1_k127_8674060_2 Belongs to the DEAD box helicase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 595.0
SYD1_k127_8674060_20 - - - - 0.000000000000000000000000000000008194 137.0
SYD1_k127_8674060_21 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000000000000004221 108.0
SYD1_k127_8674060_22 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0050896,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000002692 75.0
SYD1_k127_8674060_23 Protein of unknown function (DUF1192) - - - 0.00000000001892 67.0
SYD1_k127_8674060_24 Protein involved in meta-pathway of phenol degradation - - - 0.0000000001013 64.0
SYD1_k127_8674060_25 with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis K01658,K01664,K13497 - 2.4.2.18,2.6.1.85,4.1.3.27 0.0001746 44.0
SYD1_k127_8674060_3 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008245 518.0
SYD1_k127_8674060_4 Glutathione S-transferase K11209 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007089 464.0
SYD1_k127_8674060_5 NADPH quinone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003658 457.0
SYD1_k127_8674060_6 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 413.0
SYD1_k127_8674060_7 PFAM SapC family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 381.0
SYD1_k127_8674060_8 protein conserved in bacteria K09987 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 368.0
SYD1_k127_8674060_9 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 329.0
SYD1_k127_8675128_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004364 477.0
SYD1_k127_8675128_1 Protein of unknown function (DUF3182) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 308.0
SYD1_k127_8675128_2 COG1073 Hydrolases of the alpha beta superfamily K06889 - - 0.00000000003396 69.0
SYD1_k127_8735654_0 nitrate reductase beta subunit K00371 - 1.7.5.1 1.897e-206 646.0
SYD1_k127_8735654_1 COG2041 Sulfite oxidase and related enzymes - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008128 362.0
SYD1_k127_8735654_2 nitrate reductase, gamma subunit K00374 - 1.7.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 298.0
SYD1_k127_8735654_3 peptidylprolyl isomerase K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000001506 214.0
SYD1_k127_8735654_4 nitrate reductase molybdenum cofactor assembly chaperone K00373 - - 0.0000000000000000000000000000000000000000000000000005249 193.0
SYD1_k127_8735654_5 - - - - 0.00000001649 63.0
SYD1_k127_8739702_0 Glucose dehydrogenase K00117 - 1.1.5.2 0.0 1061.0
SYD1_k127_8739702_1 TonB dependent receptor - - - 7.478e-319 998.0
SYD1_k127_8739702_10 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003386 413.0
SYD1_k127_8739702_11 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 384.0
SYD1_k127_8739702_12 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 351.0
SYD1_k127_8739702_13 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001396 271.0
SYD1_k127_8739702_14 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000001595 208.0
SYD1_k127_8739702_15 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000000000000000000000002196 220.0
SYD1_k127_8739702_16 - - - - 0.00000000000000000000000000000000000000000000000000000003404 199.0
SYD1_k127_8739702_17 Belongs to the 'phage' integrase family K03733 - - 0.000000000000000000000000000000000000000004512 155.0
SYD1_k127_8739702_18 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000000001352 139.0
SYD1_k127_8739702_19 NlpC/P60 family - - - 0.000000000000000000006787 98.0
SYD1_k127_8739702_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 1.382e-245 762.0
SYD1_k127_8739702_20 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.1.1.22 0.00000000000002992 72.0
SYD1_k127_8739702_21 - - - - 0.0001707 49.0
SYD1_k127_8739702_3 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 1.536e-226 708.0
SYD1_k127_8739702_4 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 592.0
SYD1_k127_8739702_5 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 568.0
SYD1_k127_8739702_6 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009819 546.0
SYD1_k127_8739702_7 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 541.0
SYD1_k127_8739702_8 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000904 502.0
SYD1_k127_8739702_9 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007065 469.0
SYD1_k127_8741701_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 3.236e-219 691.0
SYD1_k127_8741701_1 D-amino acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 481.0
SYD1_k127_8741701_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 477.0
SYD1_k127_8741701_3 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003982 304.0
SYD1_k127_8741701_4 Protein of unknown function (DUF2459) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008369 284.0
SYD1_k127_8741701_5 Putative member of DMT superfamily (DUF486) K09922 - - 0.00000000000000000000000000000000008283 134.0
SYD1_k127_8741701_6 Preprotein translocase subunit YajC K03210 - - 0.000000000000000000000000000004265 127.0
SYD1_k127_8761923_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004859 562.0
SYD1_k127_8761923_1 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 367.0
SYD1_k127_8761923_2 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 317.0
SYD1_k127_8761923_3 Oligopeptide transporter, OPT family - - - 0.000000000000000000000000179 106.0
SYD1_k127_8761923_4 - - - - 0.00000000000002426 82.0
SYD1_k127_8761923_5 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00002263 52.0
SYD1_k127_8793809_0 TonB-dependent Receptor Plug Domain - - - 7.347e-294 925.0
SYD1_k127_8793809_1 Sulfotransferase family - - - 8.687e-229 719.0
SYD1_k127_8793809_10 dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000004987 207.0
SYD1_k127_8793809_11 Transcriptional regulator K13771,K13772 - - 0.00000000000000000000000000000000000000000000001439 180.0
SYD1_k127_8793809_12 COG2346 Truncated hemoglobins K06886 - - 0.0000000000000000000000000000000000000001646 159.0
SYD1_k127_8793809_13 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000000000000000000000000000836 130.0
SYD1_k127_8793809_14 Domain of unknown function (DUF1971) - - - 0.00000000000000000000000000002035 119.0
SYD1_k127_8793809_15 - - - - 0.00000000000000000007748 95.0
SYD1_k127_8793809_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 2.046e-223 698.0
SYD1_k127_8793809_3 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 587.0
SYD1_k127_8793809_4 Alternative oxidase K17893 - 1.10.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009023 390.0
SYD1_k127_8793809_5 Cytochrome c1 K00413 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 385.0
SYD1_k127_8793809_6 Domain of unknown function (DUF5117) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008139 342.0
SYD1_k127_8793809_7 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006165 297.0
SYD1_k127_8793809_8 photosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009458 291.0
SYD1_k127_8793809_9 Sulfite exporter TauE/SafE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004279 289.0
SYD1_k127_8794232_0 TonB-dependent Receptor Plug Domain - - - 3.251e-320 1009.0
SYD1_k127_8794232_1 PFAM glycoside hydrolase family 3 domain protein K05349 - 3.2.1.21 1.606e-285 903.0
SYD1_k127_8794232_10 lacI family K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 309.0
SYD1_k127_8794232_11 Glycosyl hydrolases family 16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009167 311.0
SYD1_k127_8794232_12 A domain family that is part of the cupin metalloenzyme superfamily. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001708 278.0
SYD1_k127_8794232_13 Arginine repressor, DNA binding domain K03402 - - 0.000000000000000000000000000000000000002782 152.0
SYD1_k127_8794232_14 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000065 93.0
SYD1_k127_8794232_2 Tryptophan halogenase K14266 - 1.14.19.9 7.14e-241 754.0
SYD1_k127_8794232_3 Glycosyl hydrolase family 3 C-terminal domain - - - 1.455e-239 762.0
SYD1_k127_8794232_4 Belongs to the glycosyl hydrolase 30 family K01201 - 3.2.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 494.0
SYD1_k127_8794232_5 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 456.0
SYD1_k127_8794232_6 Major Facilitator Superfamily K02429 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004088 380.0
SYD1_k127_8794232_7 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003923 357.0
SYD1_k127_8794232_8 Glycosyl hydrolase family 20, domain 2 K12373 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 338.0
SYD1_k127_8794232_9 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 321.0
SYD1_k127_8865996_0 COG0145 N-methylhydantoinase A acetone carboxylase, beta subunit K01469 - 3.5.2.9 0.0 1665.0
SYD1_k127_8865996_1 Efflux pump membrane transporter K18138 - - 0.0 1470.0
SYD1_k127_8865996_10 Tryptophan halogenase K14266 - 1.14.19.9 1.303e-203 647.0
SYD1_k127_8865996_11 Belongs to the N(4) N(6)-methyltransferase family K13581 - 2.1.1.72 2.943e-194 611.0
SYD1_k127_8865996_12 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 581.0
SYD1_k127_8865996_13 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009696 595.0
SYD1_k127_8865996_14 NAD(P) transhydrogenase subunit alpha K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 536.0
SYD1_k127_8865996_15 N-carbamoylputrescine amidase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 512.0
SYD1_k127_8865996_16 RND efflux system, outer membrane lipoprotein K18139 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 503.0
SYD1_k127_8865996_17 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004724 479.0
SYD1_k127_8865996_18 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 475.0
SYD1_k127_8865996_19 epimerase dehydratase K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 468.0
SYD1_k127_8865996_2 Glycosyl hydrolases family 31 K01187 - 3.2.1.20 0.0 1043.0
SYD1_k127_8865996_20 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002323 457.0
SYD1_k127_8865996_21 dihydropteroate synthase K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 441.0
SYD1_k127_8865996_22 Protein of unknown function (DUF2891) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004496 441.0
SYD1_k127_8865996_23 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 415.0
SYD1_k127_8865996_24 COG1609 Transcriptional regulators - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 398.0
SYD1_k127_8865996_25 Belongs to the glycosyl hydrolase 2 family K01190 - 3.2.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005841 371.0
SYD1_k127_8865996_26 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 376.0
SYD1_k127_8865996_27 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 320.0
SYD1_k127_8865996_28 aspartate racemase K01779 - 5.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 316.0
SYD1_k127_8865996_29 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004271 294.0
SYD1_k127_8865996_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0 1004.0
SYD1_k127_8865996_30 FAD dependent oxidoreductase K19746 - 1.4.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007793 313.0
SYD1_k127_8865996_31 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003335 298.0
SYD1_k127_8865996_32 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 289.0
SYD1_k127_8865996_33 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases K07313 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000024 287.0
SYD1_k127_8865996_34 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001259 287.0
SYD1_k127_8865996_35 Glutathione-dependent formaldehyde-activating GFA - - - 0.000000000000000000000000000000000000000000000000000000000001386 211.0
SYD1_k127_8865996_36 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000000000000000000000000001914 207.0
SYD1_k127_8865996_37 Protein of unknown function (DUF1465) K13592 - - 0.0000000000000000000000000000000000000000000000000000000003198 207.0
SYD1_k127_8865996_38 protein affecting Mg2 Co2 transport K06195 - - 0.000000000000000000000000000000000000000000000000000003655 192.0
SYD1_k127_8865996_39 non-haem dioxygenase in morphine synthesis N-terminal - - - 0.0000000000000000000000000000000000000000000000000000124 202.0
SYD1_k127_8865996_4 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 7.077e-315 994.0
SYD1_k127_8865996_40 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000004398 190.0
SYD1_k127_8865996_41 PFAM YbaK prolyl-tRNA synthetase associated region - - - 0.00000000000000000000000000000000000000000000000005151 185.0
SYD1_k127_8865996_42 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000000006907 183.0
SYD1_k127_8865996_43 nad(P) transhydrogenase subunit alpha K00324 - 1.6.1.2 0.000000000000000000000000000000000000000004943 156.0
SYD1_k127_8865996_44 amidohydrolase - - - 0.000000000000000007257 83.0
SYD1_k127_8865996_46 Small protein - - - 0.0000000001046 63.0
SYD1_k127_8865996_5 Alpha-amylase domain - - - 3.199e-263 827.0
SYD1_k127_8865996_6 Alpha-amylase domain K01187 - 3.2.1.20 2.991e-240 753.0
SYD1_k127_8865996_7 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 8.072e-236 737.0
SYD1_k127_8865996_8 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 4.821e-216 679.0
SYD1_k127_8865996_9 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 5.101e-209 661.0
SYD1_k127_9137897_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.0 1186.0
SYD1_k127_9137897_1 Transcriptional regulator K04761 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 445.0
SYD1_k127_9137897_2 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005052 381.0
SYD1_k127_9137897_3 serine acetyltransferase K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 344.0
SYD1_k127_9137897_4 Alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 323.0
SYD1_k127_9137897_5 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 303.0
SYD1_k127_9137897_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006968 303.0
SYD1_k127_9137897_7 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003174 289.0
SYD1_k127_9137897_8 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K04756 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003609 253.0
SYD1_k127_9137897_9 Protein of unknown function (DUF2794) - - - 0.00000000000000000000000000000000000000008497 166.0
SYD1_k127_9171879_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 1.037e-194 614.0
SYD1_k127_9171879_1 Voltage gated chloride channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009244 493.0
SYD1_k127_9171879_2 Chalcone and stilbene synthases, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003977 471.0
SYD1_k127_9171879_3 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 395.0
SYD1_k127_9171879_4 glucose sorbosone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000521 392.0
SYD1_k127_9171879_5 Predicted membrane protein (DUF2231) - - - 0.000000000000000000000000000000000000000000008324 169.0
SYD1_k127_9171879_6 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000004533 79.0