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Overview

ID MAG03725
Name SYD1_bin.62
Sample SMP0094
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family Burkholderiaceae
Genus Limnobacter
Species Limnobacter litoralis
Assembly information
Completeness (%) 97.32
Contamination (%) 1.25
GC content (%) 55.0
N50 (bp) 10,976
Genome size (bp) 2,869,082

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2852

Gene name Description KEGG GOs EC E-value Score Sequence
SYD1_k127_1033402_0 Capsule biosynthesis GfcC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004392 350.0
SYD1_k127_103451_0 AI-2E family transporter - - - 0.0000000000000000654 86.0
SYD1_k127_103451_1 Protein of unknown function (DUF541) - - - 0.0000000000000003017 88.0
SYD1_k127_103451_2 protein N-acetylglucosaminyltransferase activity - - - 0.000000000000001862 87.0
SYD1_k127_103451_3 Subtilase family K14645 - - 0.0000000001082 72.0
SYD1_k127_103451_4 Protein of unknown function (DUF3135) - - - 0.000004811 54.0
SYD1_k127_1079974_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000602 498.0
SYD1_k127_1079974_1 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 407.0
SYD1_k127_1079974_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 357.0
SYD1_k127_1079974_3 Phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.00000000005797 73.0
SYD1_k127_1079974_4 - - - - 0.000000004619 57.0
SYD1_k127_1087240_0 acyl-CoA dehydrogenase K00249 - 1.3.8.7 9.984e-229 714.0
SYD1_k127_1087240_1 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006849 436.0
SYD1_k127_1087240_2 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 328.0
SYD1_k127_1087240_3 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.0000000000007607 68.0
SYD1_k127_111101_0 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 514.0
SYD1_k127_111101_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 451.0
SYD1_k127_111101_2 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 286.0
SYD1_k127_111101_3 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000006588 241.0
SYD1_k127_111101_4 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.0000000000000000000000000000000000000000000000002474 197.0
SYD1_k127_111101_5 Cold shock protein domain K03704 - - 0.000000000000000000000000000001438 123.0
SYD1_k127_115210_0 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001663 258.0
SYD1_k127_115210_1 PFAM YaeQ family protein - - - 0.0000000000000000000000000000000000000003665 156.0
SYD1_k127_1157402_0 4Fe-4S dicluster domain - - - 3.269e-240 760.0
SYD1_k127_1157402_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 455.0
SYD1_k127_1168619_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000462 225.0
SYD1_k127_1168619_1 RHS protein - - - 0.00004021 56.0
SYD1_k127_1180387_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 2271.0
SYD1_k127_1180387_1 Phage integrase, N-terminal SAM-like domain K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 333.0
SYD1_k127_1180387_2 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000008513 261.0
SYD1_k127_1180387_3 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000001812 258.0
SYD1_k127_1180387_4 Bacterial protein of unknown function (DUF898) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000003622 151.0
SYD1_k127_1180979_0 SpoIIAA-like - - - 0.00000000000000000000000000005097 119.0
SYD1_k127_1180979_1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) K13694,K13695 - 3.4.17.13 0.000000000000000000000000001058 119.0
SYD1_k127_1180979_2 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.0000000003386 60.0
SYD1_k127_1180993_0 PIN domain - - - 0.000000000000000000000000000000000000000000000000000000000008181 208.0
SYD1_k127_1180993_1 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00000000000000000000000002658 109.0
SYD1_k127_1180993_2 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.0000000003386 60.0
SYD1_k127_1180993_3 PFAM NlpC P60 family K13694,K13695 - 3.4.17.13 0.00000004114 58.0
SYD1_k127_1181316_0 Ferrous iron transport protein B C terminus - - - 3e-299 929.0
SYD1_k127_1181316_1 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 2.999e-254 791.0
SYD1_k127_1181316_2 Acyl-CoA dehydrogenase, C-terminal domain K09456 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003995,GO:0005488,GO:0005515,GO:0006355,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008470,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016491,GO:0016627,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0033554,GO:0042802,GO:0043565,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0055114,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 1.673e-238 749.0
SYD1_k127_1181316_3 Transcriptional regulator, LysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008333 309.0
SYD1_k127_1181316_4 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000001995 241.0
SYD1_k127_1181316_5 FeoA K04758 - - 0.000000000000000001005 89.0
SYD1_k127_1181316_6 PFAM OsmC family protein - - - 0.0000000009836 59.0
SYD1_k127_1190714_0 Transposase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004694 478.0
SYD1_k127_1191308_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 299.0
SYD1_k127_1191333_0 protein related to capsule biosynthesis enzymes K07154 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003475 556.0
SYD1_k127_1191333_1 Belongs to the DNA photolyase family K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000002522 238.0
SYD1_k127_1191333_2 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000001265 119.0
SYD1_k127_1192899_0 Histidine kinase K15011 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005137 541.0
SYD1_k127_1192899_1 response regulator K15012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002058 274.0
SYD1_k127_1192899_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004985 252.0
SYD1_k127_1192899_3 Transcriptional regulator K03710 - - 0.000000000000000000000000000000000000000000000000000000000002203 218.0
SYD1_k127_1192899_4 Thioesterase superfamily protein K10806 - - 0.0000000000000000000000000000000000000000000000007833 177.0
SYD1_k127_1192899_5 PFAM Surfeit locus 1 family protein K14998 - - 0.000000004847 57.0
SYD1_k127_1202797_0 Voltage gated chloride channel - - - 6.683e-215 674.0
SYD1_k127_1202797_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 527.0
SYD1_k127_1202797_2 Uncharacterized ACR, COG1993 - - - 0.0000000000000000000000001509 108.0
SYD1_k127_1210949_0 Collagenase K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009832 326.0
SYD1_k127_1211557_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 2.944e-214 670.0
SYD1_k127_1211557_1 Transcriptional regulator K13643 - - 0.0000000000000000000000000000000000000000000000000000000000002116 214.0
SYD1_k127_1211557_2 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.00000000000029 69.0
SYD1_k127_1212800_0 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 GO:0003674,GO:0003824,GO:0004416,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0016790,GO:0034641,GO:0043603,GO:0044237,GO:0051186,GO:0071704,GO:1901564 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000003378 225.0
SYD1_k127_1212800_1 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000004584 166.0
SYD1_k127_1230804_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K22015 - 1.17.1.9,1.17.99.7 0.0 1275.0
SYD1_k127_1230804_1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00122 - 1.17.1.9 9.375e-239 747.0
SYD1_k127_1230804_2 flavoprotein involved in K transport - - - 2.246e-236 740.0
SYD1_k127_1230804_3 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007124 316.0
SYD1_k127_1230804_4 Protein of unknown function (DUF1255) K09913 - 2.4.2.1,2.4.2.2 0.000000000000000000000000000000000000000000004121 166.0
SYD1_k127_1230804_5 Protein of unknown function (DUF2384) - - - 0.0004132 43.0
SYD1_k127_1230841_0 Acyclic terpene utilisation family protein AtuA - - - 8.731e-201 641.0
SYD1_k127_1231554_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001129 253.0
SYD1_k127_1231554_1 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000001438 153.0
SYD1_k127_1254337_0 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000005081 226.0
SYD1_k127_1254337_1 Protein of unknown function, DUF547 - - - 0.00000000000000000000000000000000000000000000000000000000001398 216.0
SYD1_k127_1254337_2 - - - - 0.0000000002994 67.0
SYD1_k127_1255376_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 7.587e-240 745.0
SYD1_k127_1255376_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 559.0
SYD1_k127_1255376_10 flavin reductase domain protein - - - 0.00000000000000000000000000000000000000007281 160.0
SYD1_k127_1255376_11 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000002375 153.0
SYD1_k127_1255376_12 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.000000000000000000000000000000004329 134.0
SYD1_k127_1255376_13 HD domain - - - 0.000000000000000000000000000000004503 141.0
SYD1_k127_1255376_14 sensor histidine kinase - - - 0.0000000000000000000000000000009762 134.0
SYD1_k127_1255376_15 PD-(D/E)XK nuclease superfamily K16899 - 3.6.4.12 0.000000000000000000000000002509 130.0
SYD1_k127_1255376_16 SMART Tetratricopeptide domain protein - - - 0.00000000000000000000001778 110.0
SYD1_k127_1255376_17 Protein of unknown function (DUF1232) - - - 0.0000000103 60.0
SYD1_k127_1255376_18 Polyketide cyclase / dehydrase and lipid transport - - - 0.0007059 49.0
SYD1_k127_1255376_2 CoA-transferase family III K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006886 548.0
SYD1_k127_1255376_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 476.0
SYD1_k127_1255376_4 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0004801,GO:0016740,GO:0016744 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006011 427.0
SYD1_k127_1255376_5 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 446.0
SYD1_k127_1255376_6 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000005044 240.0
SYD1_k127_1255376_7 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.000000000000000000000000000000000000000000000000000009298 190.0
SYD1_k127_1255376_8 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000000000004353 173.0
SYD1_k127_1255376_9 Type II secretion system K12511 - - 0.0000000000000000000000000000000000000000000000728 181.0
SYD1_k127_1255767_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004702 438.0
SYD1_k127_1255767_1 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 377.0
SYD1_k127_1255767_2 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935,K02169 GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.197,6.3.3.3 0.0000000000000000000000000000000000000000000000000000000183 206.0
SYD1_k127_1255767_3 Methyltransferase domain K02169 - 2.1.1.197 0.00000000000000000000000000005991 126.0
SYD1_k127_125670_0 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003809 385.0
SYD1_k127_125670_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000004283 94.0
SYD1_k127_125670_2 PFAM response regulator receiver - - - 0.000000000000004438 83.0
SYD1_k127_125670_3 Tripartite ATP-independent periplasmic transporter, DctM component K03299 - - 0.0003059 46.0
SYD1_k127_1257849_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 1.684e-233 742.0
SYD1_k127_1257849_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007161 505.0
SYD1_k127_1257849_10 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000334 164.0
SYD1_k127_1257849_11 PFAM sigma 54 modulation protein ribosomal protein S30EA K05808 - - 0.000000000000000000000000000000000000001946 149.0
SYD1_k127_1257849_12 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.0000000000000000002645 96.0
SYD1_k127_1257849_13 Prokaryotic N-terminal methylation motif - - - 0.000000000000002985 85.0
SYD1_k127_1257849_14 general secretion pathway protein K02459,K02650 - - 0.00000001128 66.0
SYD1_k127_1257849_15 lipopolysaccharide transmembrane transporter activity K02040,K11719 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015920,GO:0016020,GO:0016021,GO:0017089,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0033036,GO:0042597,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:1901264 - 0.00000001907 64.0
SYD1_k127_1257849_2 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005325 402.0
SYD1_k127_1257849_3 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007931 391.0
SYD1_k127_1257849_4 Branched-chain amino acid ATP-binding cassette transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 334.0
SYD1_k127_1257849_5 A G-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 305.0
SYD1_k127_1257849_6 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 294.0
SYD1_k127_1257849_7 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001764 267.0
SYD1_k127_1257849_8 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.0000000000000000000000000000000000000000000000000000000000001079 216.0
SYD1_k127_1257849_9 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000003264 165.0
SYD1_k127_1258115_0 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000638 419.0
SYD1_k127_1258115_1 long-chain fatty acid transport protein K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009056 411.0
SYD1_k127_1258115_2 LysR substrate binding domain K03717 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003216 262.0
SYD1_k127_1258115_3 PFAM methyltransferase small - - - 0.000000000000000000000000000000000000000000000000006524 183.0
SYD1_k127_126344_0 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003903 281.0
SYD1_k127_126344_1 long-chain fatty acid transport protein K06076 GO:0003674,GO:0005215,GO:0005319,GO:0005324,GO:0005342,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0008028,GO:0008150,GO:0008509,GO:0008514,GO:0009279,GO:0010876,GO:0015075,GO:0015245,GO:0015267,GO:0015288,GO:0015318,GO:0015483,GO:0015711,GO:0015718,GO:0015849,GO:0015908,GO:0015909,GO:0016020,GO:0019867,GO:0022803,GO:0022829,GO:0022834,GO:0022836,GO:0022857,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0034220,GO:0044462,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098656,GO:1903825,GO:1905039 - 0.0000000000004248 80.0
SYD1_k127_1271383_0 type II secretion system protein E K02283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 430.0
SYD1_k127_1271383_1 Type II secretion system K12510 - - 0.000000000000000000000000000000000000000000005856 175.0
SYD1_k127_1273022_0 DinB superfamily - - - 0.0 1177.0
SYD1_k127_1286040_0 DNA polymerase alpha chain like domain K07053 GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0097657 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 392.0
SYD1_k127_1286040_1 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 302.0
SYD1_k127_1286040_2 Protein of unknown function (DUF455) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001515 286.0
SYD1_k127_1286040_3 Belongs to the SUA5 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003773 255.0
SYD1_k127_1286040_4 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000000000000000004914 232.0
SYD1_k127_1286040_5 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.000000000000000000000001388 107.0
SYD1_k127_1286040_6 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000004756 89.0
SYD1_k127_1286040_7 Peptidase M50 - - - 0.00000000009533 63.0
SYD1_k127_1294105_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 5.838e-265 842.0
SYD1_k127_1294105_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 1.675e-264 822.0
SYD1_k127_1294105_10 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006957 293.0
SYD1_k127_1294105_11 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000003327 265.0
SYD1_k127_1294105_12 Exonuclease K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000003219 226.0
SYD1_k127_1294105_13 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.000000000000000000000000000000000000000000000000000000000001284 218.0
SYD1_k127_1294105_14 endonuclease III K01247 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000004072 209.0
SYD1_k127_1294105_15 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000259 197.0
SYD1_k127_1294105_16 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 GO:0002097,GO:0002101,GO:0002136,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016879,GO:0032267,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 6.3.4.19 0.00000000000000000000000000000000000000000000133 178.0
SYD1_k127_1294105_17 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.000000000000000000000000000000000000000000123 173.0
SYD1_k127_1294105_18 Cysteine-rich domain - - - 0.00000000000000000000000000000000000000001464 160.0
SYD1_k127_1294105_19 Glycine zipper - - - 0.000000000002109 74.0
SYD1_k127_1294105_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 5.128e-204 644.0
SYD1_k127_1294105_20 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.000007525 49.0
SYD1_k127_1294105_3 Bacterial protein of unknown function (DUF853) K06915 - - 9.23e-198 626.0
SYD1_k127_1294105_4 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 615.0
SYD1_k127_1294105_5 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 467.0
SYD1_k127_1294105_6 Nuclease-related domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007688 391.0
SYD1_k127_1294105_7 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004254 326.0
SYD1_k127_1294105_8 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 314.0
SYD1_k127_1294105_9 Domain of unknown function (DUF4440) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005437 308.0
SYD1_k127_1297960_0 dna topoisomerase III K03169 - 5.99.1.2 0.0 1225.0
SYD1_k127_1297960_1 SNARE associated Golgi protein - - - 7.539e-313 976.0
SYD1_k127_1297960_2 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 0.000000000000000000000000000000000000000002376 175.0
SYD1_k127_1297960_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000001346 127.0
SYD1_k127_12980_0 COG0642 Signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 306.0
SYD1_k127_12980_1 histidine kinase A domain protein - - - 0.0000000000000004598 89.0
SYD1_k127_1307158_0 Glutathione S-transferase K11209 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000703 497.0
SYD1_k127_1307158_1 LysR substrate binding domain - - - 0.000000000000000000000005144 104.0
SYD1_k127_1307158_2 PFAM Ornithine cyclodeaminase mu-crystallin K01750 - 4.3.1.12 0.000008596 49.0
SYD1_k127_1310409_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008391 427.0
SYD1_k127_1310409_1 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006053 332.0
SYD1_k127_1310409_2 Chemotaxis protein CheA K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000005497 251.0
SYD1_k127_1313091_0 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007769 414.0
SYD1_k127_1313091_1 PaaX-like protein C-terminal domain - - - 0.0000000000000000000000000000000005189 136.0
SYD1_k127_132351_0 Belongs to the Nudix hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004888 244.0
SYD1_k127_132351_1 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008914,GO:0016740,GO:0016746,GO:0016755,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000002038 220.0
SYD1_k127_132351_2 - - - - 0.0000000000000000009363 87.0
SYD1_k127_132351_3 (Hpt) domain K20976 - - 0.000004384 54.0
SYD1_k127_1324490_0 NADH-quinone oxidoreductase K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004178 424.0
SYD1_k127_13324_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00836 GO:0003674,GO:0003824,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0018130,GO:0019491,GO:0019752,GO:0032787,GO:0042399,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.6.1.76 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 502.0
SYD1_k127_13324_1 Flagellar motor switch K02416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003858 444.0
SYD1_k127_13324_10 COG1846 Transcriptional regulators - - - 0.00000000000000000000000000001099 125.0
SYD1_k127_13324_11 Role in flagellar biosynthesis K02420 - - 0.000000000000000000000000002673 113.0
SYD1_k127_13324_12 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000003381 115.0
SYD1_k127_13324_13 Acyltransferase - - - 0.00000000000000000000002607 102.0
SYD1_k127_13324_14 flagellar K02418 - - 0.000000000000008413 81.0
SYD1_k127_13324_15 PAS fold - - - 0.000000009912 68.0
SYD1_k127_13324_16 Flagellar hook-length control protein K02414 - - 0.000014 56.0
SYD1_k127_13324_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K11928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003019 430.0
SYD1_k127_13324_3 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006579 316.0
SYD1_k127_13324_4 ectoine hydroxylase K10674 - 1.14.11.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004142 284.0
SYD1_k127_13324_5 Role in flagellar biosynthesis K02421 - - 0.00000000000000000000000000000000000000000000000000000001667 208.0
SYD1_k127_13324_6 Catalyzes the circularization of gamma-N-acetyl- alpha,gamma-diaminobutyric acid (ADABA) to ectoine (1,4,5,6- tetrahydro-2-methyl-4-pyrimidine carboxylic acid), which is an excellent osmoprotectant K06720 - 4.2.1.108 0.00000000000000000000000000000000000000000000000000000008556 197.0
SYD1_k127_13324_7 Flagellar motor switch protein FliN K02417,K03225 - - 0.000000000000000000000000000000000000000000000000000006366 193.0
SYD1_k127_13324_8 Acetyltransferase (GNAT) family K06718 - 2.3.1.178 0.00000000000000000000000000000000000000000000006011 174.0
SYD1_k127_13324_9 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.0000000000000000000000000000002297 129.0
SYD1_k127_133309_0 Type II secretion system K12510 - - 0.0000000000000000000000000000000000000000000005801 178.0
SYD1_k127_1335030_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 4.668e-207 652.0
SYD1_k127_1335030_1 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 552.0
SYD1_k127_1335030_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 529.0
SYD1_k127_1335030_3 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004135 447.0
SYD1_k127_1335030_4 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 309.0
SYD1_k127_1335030_5 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000004253 226.0
SYD1_k127_1335030_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000001748 234.0
SYD1_k127_1335030_7 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000143 189.0
SYD1_k127_1335030_8 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.0000000000000000000000000000000002475 139.0
SYD1_k127_1335030_9 Glycoprotease family K14742 - - 0.0000000000000000002338 97.0
SYD1_k127_1335076_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 6.384e-237 744.0
SYD1_k127_1335076_1 Belongs to the ParA family K03609 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008083 463.0
SYD1_k127_1335076_2 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000009961 228.0
SYD1_k127_1335076_3 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.000000000000000000000000000000000001176 149.0
SYD1_k127_1335076_4 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000000000005392 113.0
SYD1_k127_1335076_5 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 - - 0.000000000000000000000000009582 111.0
SYD1_k127_1335076_6 - - - - 0.0003341 44.0
SYD1_k127_1349477_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1279.0
SYD1_k127_1349477_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 2.626e-275 866.0
SYD1_k127_1349477_10 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000000000000000001471 212.0
SYD1_k127_1349477_11 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids - - - 0.0000000000000000000000000000000000000000000000000000001459 202.0
SYD1_k127_1349477_12 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000019 194.0
SYD1_k127_1349477_13 SpoU rRNA Methylase family K03437 - - 0.0000000000000000000000000000000000000000001144 169.0
SYD1_k127_1349477_14 Belongs to the skp family K06142 - - 0.0000000000000000000000000000000000000000002756 164.0
SYD1_k127_1349477_15 Membrane protein implicated in regulation of membrane protease activity - - - 0.0000000000000000005288 91.0
SYD1_k127_1349477_2 Membrane protease subunits, stomatin prohibitin homologs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 448.0
SYD1_k127_1349477_3 Deoxyribodipyrimidine photo-lyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005913 451.0
SYD1_k127_1349477_4 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007448 400.0
SYD1_k127_1349477_5 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006838 384.0
SYD1_k127_1349477_6 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 372.0
SYD1_k127_1349477_7 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 351.0
SYD1_k127_1349477_8 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 330.0
SYD1_k127_1349477_9 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 320.0
SYD1_k127_1375997_0 Belongs to the ClpA ClpB family K03694 - - 0.0 1226.0
SYD1_k127_1375997_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1186.0
SYD1_k127_1375997_10 diguanylate cyclase - - - 0.000000000000000000000000000001241 136.0
SYD1_k127_1375997_11 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 3.1.11.6 0.00008729 50.0
SYD1_k127_1375997_2 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.42 1.473e-238 741.0
SYD1_k127_1375997_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 409.0
SYD1_k127_1375997_4 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K03601,K04564 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0044237,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 1.15.1.1,3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007291 353.0
SYD1_k127_1375997_5 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.000000000000000000000000000000000000000000000000000000000000000003114 229.0
SYD1_k127_1375997_6 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000001242 172.0
SYD1_k127_1375997_7 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000000000000000388 153.0
SYD1_k127_1375997_8 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000000000203 128.0
SYD1_k127_1375997_9 Cold shock protein K03704 - - 0.0000000000000000000000000000006457 123.0
SYD1_k127_1378520_0 argininosuccinate lyase K01755 - 4.3.2.1 3.962e-218 687.0
SYD1_k127_1378520_1 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 394.0
SYD1_k127_1378520_2 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009038 337.0
SYD1_k127_1378520_3 C4-dicarboxylate ABC transporter substrate-binding protein - - - 0.00000000000000000000000000000000000000000000001244 176.0
SYD1_k127_1378520_4 PFAM Uroporphyrinogen III synthase HEM4 K01719 GO:0003674,GO:0003824,GO:0004852,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.75 0.000000193 63.0
SYD1_k127_1378520_5 HemX, putative uroporphyrinogen-III C-methyltransferase K02496 - 2.1.1.107 0.0003661 53.0
SYD1_k127_1387367_0 amino acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000006466 235.0
SYD1_k127_1387367_1 HNH nucleases - - - 0.000000000000000000000000000000000000011 147.0
SYD1_k127_1387367_2 - - - - 0.000000000000000000000000000000000006618 145.0
SYD1_k127_1389395_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 GO:0003674,GO:0003824,GO:0004353,GO:0004354,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0042802,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.4 2.733e-212 667.0
SYD1_k127_1389395_1 chloride channel K03281 - - 4.375e-194 622.0
SYD1_k127_1389395_2 NADPH dehydrogenase K00355 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007084 289.0
SYD1_k127_1389395_3 Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide K01725 - 4.2.1.104 0.000000000000000000000000000000000000000000000000000000000000000000001903 238.0
SYD1_k127_1389395_4 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000008754 258.0
SYD1_k127_1389395_5 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000005274 225.0
SYD1_k127_1389395_6 WHG domain - - - 0.0000000000000000000000000000000000000000000000000000000005969 209.0
SYD1_k127_1389395_7 LuxR family transcriptional regulator - - - 0.0000000000000006139 87.0
SYD1_k127_1389395_8 Helix-turn-helix XRE-family like proteins - - - 0.0000000000008634 77.0
SYD1_k127_1389395_9 outer membrane efflux protein - - - 0.0006895 47.0
SYD1_k127_1390577_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006762 348.0
SYD1_k127_1396614_0 ABC-type branched-chain amino acid transport system, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 598.0
SYD1_k127_1396614_1 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000951 535.0
SYD1_k127_1396614_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 511.0
SYD1_k127_1396614_3 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 494.0
SYD1_k127_1396614_4 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003723 448.0
SYD1_k127_1396614_5 amino acid transport system, ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 410.0
SYD1_k127_1417159_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 348.0
SYD1_k127_1417159_1 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.00000000000000000001824 93.0
SYD1_k127_1422784_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 563.0
SYD1_k127_1422784_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 501.0
SYD1_k127_1422784_2 Esterase of the alpha-beta hydrolase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007144 263.0
SYD1_k127_1422784_3 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000004625 243.0
SYD1_k127_1422784_4 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000000000000000000000000000006516 217.0
SYD1_k127_1422784_5 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000002653 55.0
SYD1_k127_1455202_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1065.0
SYD1_k127_1455202_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 1.319e-215 676.0
SYD1_k127_1455202_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003335 594.0
SYD1_k127_1455202_3 Belongs to the short-chain dehydrogenases reductases (SDR) family K00023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 1.1.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 425.0
SYD1_k127_1455202_4 phosphoserine phosphatase K01079 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004441 297.0
SYD1_k127_1455202_5 synthesis repressor, PhaR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001504 252.0
SYD1_k127_1455202_6 Belongs to the thiolase family K00626 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.9 0.000000000000003219 75.0
SYD1_k127_1463827_0 Mur ligase, middle domain protein K03802 - 6.3.2.29,6.3.2.30 4.4e-323 1009.0
SYD1_k127_1463827_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 1.767e-246 768.0
SYD1_k127_1463827_2 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 1.165e-221 692.0
SYD1_k127_1463827_3 Belongs to the aspartokinase family K00928 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576 2.7.2.4 4.703e-206 647.0
SYD1_k127_1463827_4 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 508.0
SYD1_k127_1463827_5 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000059 414.0
SYD1_k127_1463827_6 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 348.0
SYD1_k127_1463827_7 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000005513 217.0
SYD1_k127_1463827_8 colicin V production protein K03558 - - 0.0000000000000000000000000000005628 128.0
SYD1_k127_1463827_9 Sporulation related domain K03749 - - 0.00000000000485 76.0
SYD1_k127_146874_0 PFAM phosphoesterase K01114 - 3.1.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007882 314.0
SYD1_k127_146874_1 Alkaline phosphatase homologues K01077 - 3.1.3.1 0.000000000000000000000000000000000002772 139.0
SYD1_k127_1468971_0 Capsule biosynthesis GfcC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 437.0
SYD1_k127_1480434_0 Heavy-metal-associated domain - - - 8.991e-235 740.0
SYD1_k127_1480434_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 432.0
SYD1_k127_1480434_2 Membrane transport protein K07088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 328.0
SYD1_k127_1480434_3 Uncharacterized protein family UPF0016 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 312.0
SYD1_k127_1480434_4 helix_turn_helix, mercury resistance K19591 - - 0.000000000000000000000000000000000000000000000904 175.0
SYD1_k127_1498507_0 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008024 400.0
SYD1_k127_1498507_1 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 288.0
SYD1_k127_1501172_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1045.0
SYD1_k127_1501172_1 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008748 385.0
SYD1_k127_1501172_2 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 324.0
SYD1_k127_1501172_3 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000002306 229.0
SYD1_k127_1501172_4 Belongs to the thioredoxin family K03671 - - 0.000000000000000006231 90.0
SYD1_k127_1501172_5 - - - - 0.00002382 51.0
SYD1_k127_1502539_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 7.775e-199 627.0
SYD1_k127_1502539_1 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 452.0
SYD1_k127_1502539_2 TRAP-type C4-dicarboxylate transport system, small permease component - - - 0.0000000000000000000000000000000000000000000000009688 179.0
SYD1_k127_1502539_3 Malonate decarboxylase K13929 - 2.3.1.187 0.0000001862 54.0
SYD1_k127_1502550_0 haloacid dehalogenase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 319.0
SYD1_k127_1502550_1 Malonate decarboxylase K13929 - 2.3.1.187 0.00000001132 58.0
SYD1_k127_1515130_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 513.0
SYD1_k127_1515130_1 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 381.0
SYD1_k127_1515130_2 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 362.0
SYD1_k127_1515130_3 VacJ family lipoprotein K04754 - - 0.000000000000000000000000000000000000000000000000000000000000000000489 237.0
SYD1_k127_1515130_4 MlaC protein K07323 - - 0.0000000000000000000000000000000000000000000000003422 183.0
SYD1_k127_1515130_5 Belongs to the BolA IbaG family - - - 0.00000000000000000000000000009766 117.0
SYD1_k127_1515130_6 STAS domain K07122 - - 0.00001324 50.0
SYD1_k127_151525_0 Carbohydrate-selective porin, OprB family K16080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006914 435.0
SYD1_k127_151525_1 PFAM Outer membrane efflux protein K15725 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001404 265.0
SYD1_k127_1540427_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 5.212e-297 918.0
SYD1_k127_1540427_1 Belongs to the KdsA family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006628 457.0
SYD1_k127_1540427_2 Acyl CoA acetate 3-ketoacid CoA transferase beta subunit K01029 - 2.8.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 336.0
SYD1_k127_1561166_0 Atp-dependent helicase K03578 - 3.6.4.13 0.0 1378.0
SYD1_k127_1561166_1 Orn/Lys/Arg decarboxylase, major domain K01582,K01584 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006553,GO:0006554,GO:0006807,GO:0008150,GO:0008152,GO:0008923,GO:0009056,GO:0009063,GO:0009066,GO:0009068,GO:0009987,GO:0016054,GO:0016829,GO:0016830,GO:0016831,GO:0017076,GO:0019001,GO:0019752,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0071704,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 4.1.1.18,4.1.1.19 0.0 1332.0
SYD1_k127_1561166_10 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 294.0
SYD1_k127_1561166_11 Belongs to the peptidase S11 family K07262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 291.0
SYD1_k127_1561166_12 TIGRFAM phasin family protein - - - 0.000000000000000000000000000000000000000000002006 170.0
SYD1_k127_1561166_13 Etoposide-induced protein 2.4 (EI24) - - - 0.000000000000000000000000000001072 130.0
SYD1_k127_1561166_14 Alpha/beta hydrolase family K01259 - 3.4.11.5 0.000000000001337 74.0
SYD1_k127_1561166_2 LUD domain K18929 - - 7.682e-211 665.0
SYD1_k127_1561166_3 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005273 571.0
SYD1_k127_1561166_4 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 412.0
SYD1_k127_1561166_5 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 378.0
SYD1_k127_1561166_6 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003203 370.0
SYD1_k127_1561166_7 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003626 345.0
SYD1_k127_1561166_8 cystathionine beta-lyase K01760 - 4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 353.0
SYD1_k127_1561166_9 Cysteine-rich domain K18928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 323.0
SYD1_k127_1565547_0 cellulose synthase K00694 - 2.4.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008794 539.0
SYD1_k127_1565547_1 Cellulose synthase operon protein C C-terminus (BCSC_C) K20543 - - 0.0000000000000000000000000000000000000000000000000000000009561 216.0
SYD1_k127_1565547_2 Cellulose biosynthesis protein BcsQ K03496 - - 0.00000734 56.0
SYD1_k127_1598789_0 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000681 469.0
SYD1_k127_1598789_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 458.0
SYD1_k127_1598789_2 Rhodanese Homology Domain K07146 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 414.0
SYD1_k127_1598789_3 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000008086 236.0
SYD1_k127_1598789_4 Glutathione S-transferase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002742 239.0
SYD1_k127_1598789_5 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000001529 211.0
SYD1_k127_1598789_6 FKBP-type peptidyl-prolyl cis-trans isomerase K03774 - 5.2.1.8 0.000000000000000000000000000000000000000002122 160.0
SYD1_k127_1598789_7 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000000000000000000000000008242 153.0
SYD1_k127_1598789_8 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000000000000006344 104.0
SYD1_k127_1601575_0 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001658 258.0
SYD1_k127_1601575_1 Voltage gated chloride channel - - - 0.00000000000000000000000000000000000000003675 154.0
SYD1_k127_1605812_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 8.988e-217 684.0
SYD1_k127_1609508_0 Belongs to the DEAD box helicase family - GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 437.0
SYD1_k127_1636565_0 PFAM Glycosyl transferase, family 4 K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000225 279.0
SYD1_k127_1638602_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 7.272e-224 700.0
SYD1_k127_1638602_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 576.0
SYD1_k127_1638602_2 membrane transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000134 284.0
SYD1_k127_1638602_3 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000259 273.0
SYD1_k127_1638602_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000000000000000000000157 225.0
SYD1_k127_1638602_5 helix_turn_helix ASNC type - - - 0.000000000000000000000000000000000000000000000000000000000001347 213.0
SYD1_k127_1638602_6 - - - - 0.0000000000000000000000000009478 117.0
SYD1_k127_1638602_7 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases - - - 0.0000000489 56.0
SYD1_k127_167667_0 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005835 465.0
SYD1_k127_170069_0 EamA-like transporter family K08978 - - 0.0000000000000000000000000000000000000000000000000000332 192.0
SYD1_k127_170069_1 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000000000000000000000000001282 188.0
SYD1_k127_170069_2 ChrB domain-containing protein - - - 0.000000000000000000000000000000000000000000001596 168.0
SYD1_k127_170069_3 Uncharacterized ACR, COG1993 - - - 0.0000000000000000000000000000000000000000001111 160.0
SYD1_k127_1743612_0 of the major facilitator superfamily - - - 2.73e-225 704.0
SYD1_k127_1743612_1 Fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 392.0
SYD1_k127_1743612_2 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 329.0
SYD1_k127_1743612_3 Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007292 313.0
SYD1_k127_1743612_4 Pfam:AmoA K07120 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005622 264.0
SYD1_k127_1743612_5 Metal-dependent hydrolase K07044 - - 0.00000000000000000000000000000000000000000000000000000004987 205.0
SYD1_k127_1743612_6 Belongs to the SOS response-associated peptidase family - - - 0.00000000000000000000000000000000000000000008604 165.0
SYD1_k127_1743612_7 Transcriptional regulator - - - 0.000000000000001012 79.0
SYD1_k127_1758539_0 NeuB family K01654 - 2.5.1.56 1.404e-261 819.0
SYD1_k127_1758539_1 Cytidylyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009272 252.0
SYD1_k127_1758539_2 PFAM O-Antigen - - - 0.0000000001042 70.0
SYD1_k127_1763198_0 Formate dehydrogenase, alpha subunit K00123 - 1.17.1.9 0.0 1067.0
SYD1_k127_1772882_0 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 393.0
SYD1_k127_1772882_1 Serine hydrolase involved in the detoxification of formaldehyde K01070 - 3.1.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 372.0
SYD1_k127_1799449_0 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 6.769e-202 633.0
SYD1_k127_1799449_1 3-oxoacid CoA-transferase, A subunit K01028 - 2.8.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 370.0
SYD1_k127_1799449_2 Acyl CoA acetate 3-ketoacid CoA transferase beta subunit K01029 - 2.8.3.5 0.000000000000000000001517 94.0
SYD1_k127_1805305_0 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.0000000000000000000000000000000000000000000000000000006239 201.0
SYD1_k127_1805305_1 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.000000000000000000000000000000000000000000000000008827 187.0
SYD1_k127_1805305_2 FlaG protein K06603 - - 0.00000000006828 67.0
SYD1_k127_1829690_0 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation - - - 5.572e-202 653.0
SYD1_k127_1829690_1 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007701 393.0
SYD1_k127_1829690_2 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001388 246.0
SYD1_k127_1829690_3 response regulator - - - 0.000000000000000000000000000000000000000000001417 166.0
SYD1_k127_1829690_4 signal peptide protein - - - 0.000000000000000000000000000000000000005078 153.0
SYD1_k127_1831602_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 5.534e-264 830.0
SYD1_k127_1831602_1 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000001525 165.0
SYD1_k127_1850115_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003723 300.0
SYD1_k127_185651_0 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002559 265.0
SYD1_k127_185651_1 Haem-degrading K11477 - - 0.000000000000000000000000000000000000000000000000000001629 194.0
SYD1_k127_185651_2 Transcriptional regulator K06075 - - 0.000000000001807 68.0
SYD1_k127_1897236_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005385 299.0
SYD1_k127_1897236_1 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000001056 72.0
SYD1_k127_1901425_0 Type II/IV secretion system protein - - - 0.0000000000000000000000000000000000000000000000000000000000000007795 228.0
SYD1_k127_1901425_1 protein transport across the cell outer membrane K02455,K02653,K10934 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0016020,GO:0032940,GO:0033036,GO:0042886,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098776 - 0.0000000000000000000000000000000000000000009002 171.0
SYD1_k127_1908783_0 Belongs to the FBPase class 1 family K03841 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 422.0
SYD1_k127_1908783_1 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007459 312.0
SYD1_k127_1908783_2 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000000002543 215.0
SYD1_k127_1908783_3 Domain of unknown function (DUF3458_C) ARM repeats K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000001432 207.0
SYD1_k127_1908783_4 Belongs to the N-Me-Phe pilin family K02650 - - 0.00000000000000000001156 98.0
SYD1_k127_191836_0 Histidine kinase K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 391.0
SYD1_k127_191836_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000004449 60.0
SYD1_k127_200846_0 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 7.611e-319 986.0
SYD1_k127_200846_1 Molecular chaperone. Has ATPase activity K04079 - - 2.782e-293 912.0
SYD1_k127_200846_10 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000001401 247.0
SYD1_k127_200846_11 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000000000000000000000000000000000006171 211.0
SYD1_k127_200846_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000000000000000000000001793 166.0
SYD1_k127_200846_13 Domain of unknown function (DUF1841) - - - 0.0000000000000000000000000000000000000000003892 162.0
SYD1_k127_200846_14 Cytochrome c class I - - - 0.000000000000000000000000000000000000002906 151.0
SYD1_k127_200846_15 PFAM 17 kDa surface antigen - - - 0.00000000000000000000000000001338 125.0
SYD1_k127_200846_16 Cytochrome c - - - 0.000000000000000000000006972 104.0
SYD1_k127_200846_17 Protein of unknown function (DUF2818) - - - 0.00000000000000000003473 93.0
SYD1_k127_200846_18 NADH-quinone oxidoreductase K00336 - 1.6.5.3 0.00000000000006029 77.0
SYD1_k127_200846_19 FIST_C - - - 0.0000259 56.0
SYD1_k127_200846_2 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 1.726e-239 748.0
SYD1_k127_200846_3 VWA containing CoxE family protein K09989 - - 3.888e-195 614.0
SYD1_k127_200846_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 564.0
SYD1_k127_200846_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 522.0
SYD1_k127_200846_6 AAA domain (Cdc48 subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 478.0
SYD1_k127_200846_7 PHB de-polymerase C-terminus K05973 - 3.1.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 321.0
SYD1_k127_200846_8 FES K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 305.0
SYD1_k127_200846_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 290.0
SYD1_k127_205071_0 gluconolactonase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008809 321.0
SYD1_k127_205071_1 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003582 258.0
SYD1_k127_205071_2 Domain of unknown function (DUF4394) - - - 0.00000000000000000000000000000000000000000000000000004074 201.0
SYD1_k127_205071_3 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000001994 190.0
SYD1_k127_205071_4 Anti-sigma-K factor rskA - - - 0.0000000000000000000000000000000000000002835 158.0
SYD1_k127_2081285_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1035.0
SYD1_k127_2081285_1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 2.054e-304 942.0
SYD1_k127_2081285_10 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 299.0
SYD1_k127_2081285_11 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001953 285.0
SYD1_k127_2081285_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002574 282.0
SYD1_k127_2081285_13 Acetolactate synthase, small subunit K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004164 278.0
SYD1_k127_2081285_14 COG1905 NADH ubiquinone oxidoreductase 24 kD subunit K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000001469 244.0
SYD1_k127_2081285_15 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000002043 228.0
SYD1_k127_2081285_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000205 202.0
SYD1_k127_2081285_17 Enterobacterial virulence protein IpgD K13085 - 3.1.3.78 0.00000000000000000000000000000000000003579 163.0
SYD1_k127_2081285_18 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000000001098 141.0
SYD1_k127_2081285_19 Preprotein translocase SecG subunit K03075 - - 0.000000000000000000000000002791 115.0
SYD1_k127_2081285_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 6.534e-254 786.0
SYD1_k127_2081285_20 Protein of unknown function (DUF3619) - - - 0.0000000456 61.0
SYD1_k127_2081285_3 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 9.106e-253 787.0
SYD1_k127_2081285_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 7.492e-251 776.0
SYD1_k127_2081285_5 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 1.152e-199 624.0
SYD1_k127_2081285_6 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 421.0
SYD1_k127_2081285_7 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 357.0
SYD1_k127_2081285_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006153 323.0
SYD1_k127_2081285_9 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006817 306.0
SYD1_k127_2321083_0 Protein of unknown function (DUF3604) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000606 628.0
SYD1_k127_2321083_1 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 538.0
SYD1_k127_2321083_10 PPIC-type PPIASE domain - - - 0.00000000000000000000000000001414 128.0
SYD1_k127_2321083_11 2-hydroxychromene-2-carboxylate isomerase - - - 0.00000000000000000000003205 108.0
SYD1_k127_2321083_2 Protein of unknown function (DUF1302) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 542.0
SYD1_k127_2321083_3 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 340.0
SYD1_k127_2321083_4 Glutathione S-transferase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 336.0
SYD1_k127_2321083_5 A predicted alpha-helical domain with a conserved ER motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007746 260.0
SYD1_k127_2321083_6 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001739 253.0
SYD1_k127_2321083_7 transglutaminase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000006236 220.0
SYD1_k127_2321083_8 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000005735 171.0
SYD1_k127_2321083_9 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000001514 166.0
SYD1_k127_2324626_0 Male sterility protein - - - 1.626e-304 946.0
SYD1_k127_2324626_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 7.44e-241 751.0
SYD1_k127_2324626_10 Catalyzes the formation of L-threonine from O-phospho-L-homoserine K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002714 279.0
SYD1_k127_2324626_11 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000001046 227.0
SYD1_k127_2324626_12 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000000000000000000000000000000000005886 202.0
SYD1_k127_2324626_13 binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000000000000001135 186.0
SYD1_k127_2324626_14 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000000000000000001852 153.0
SYD1_k127_2324626_15 PGAP1-like protein - - - 0.0000000000000000000000000000000000000009142 160.0
SYD1_k127_2324626_16 PFAM poly granule associated family protein - - - 0.00000000000000000000000000000000007857 139.0
SYD1_k127_2324626_17 Small Multidrug Resistance protein - - - 0.0000000000000000000000000000001044 127.0
SYD1_k127_2324626_18 PFAM acyl-coA-binding protein, ACBP - - - 0.0000000000000000000000000007778 113.0
SYD1_k127_2324626_19 - - - - 0.0000000000000000000000009253 113.0
SYD1_k127_2324626_2 ATPase related to phosphate starvation-inducible protein PhoH K07175 - - 3.844e-238 747.0
SYD1_k127_2324626_20 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000002486 92.0
SYD1_k127_2324626_21 Binds single-stranded DNA at the primosome assembly site (PAS) K02686 - - 0.00000000001112 69.0
SYD1_k127_2324626_3 PFAM aminotransferase class I and II K14260 - 2.6.1.2,2.6.1.66 9.341e-228 709.0
SYD1_k127_2324626_4 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 3.556e-226 714.0
SYD1_k127_2324626_5 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009913 573.0
SYD1_k127_2324626_6 belongs to the aldehyde dehydrogenase family K00128,K00154 - 1.2.1.3,1.2.1.68 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003376 524.0
SYD1_k127_2324626_7 Patatin-like phospholipase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 411.0
SYD1_k127_2324626_8 Bacterial transcriptional repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 314.0
SYD1_k127_2324626_9 Threonine synthase K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 307.0
SYD1_k127_232886_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 6.414e-239 749.0
SYD1_k127_232886_1 Domain of unknown function (DUF1929) - - - 2.3e-225 722.0
SYD1_k127_232886_10 Lactoylglutathione lyase K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000000000009941 200.0
SYD1_k127_232886_11 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000000000000000000000001129 203.0
SYD1_k127_232886_12 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000000000000000002154 199.0
SYD1_k127_232886_13 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000007122 183.0
SYD1_k127_232886_14 TonB C terminal K03646 - - 0.00000000000000000000000000000000000001076 156.0
SYD1_k127_232886_15 thioesterase K07107 - - 0.000000000000000000000000000000007512 131.0
SYD1_k127_232886_16 Pfam Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000000000000128 120.0
SYD1_k127_232886_17 Belongs to the transcriptional regulatory Fis family K03557 - - 0.00000000000000000000003762 102.0
SYD1_k127_232886_18 - - - - 0.0000000000000000006747 98.0
SYD1_k127_232886_19 - - - - 0.0007844 42.0
SYD1_k127_232886_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003623 546.0
SYD1_k127_232886_3 Protein of unknown function (DUF1298) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004529 493.0
SYD1_k127_232886_4 Involved in the TonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 475.0
SYD1_k127_232886_5 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005094 427.0
SYD1_k127_232886_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003456 431.0
SYD1_k127_232886_7 PFAM MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009335 306.0
SYD1_k127_232886_8 UbiA prenyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008761 292.0
SYD1_k127_232886_9 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000406 240.0
SYD1_k127_2329438_0 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000002677 252.0
SYD1_k127_2329438_1 outer membrane autotransporter K12686 - - 0.0000000000000000000000000000000000000000000000006005 188.0
SYD1_k127_2329438_2 Acetyltransferase (GNAT) domain - - - 0.000000003335 57.0
SYD1_k127_2331905_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 3.522e-255 815.0
SYD1_k127_2331905_1 modulator of DNA gyrase K03568 - - 8.024e-206 650.0
SYD1_k127_2331905_2 Protein of unknown function - - - 3.302e-195 658.0
SYD1_k127_2331905_3 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 538.0
SYD1_k127_2331905_4 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 363.0
SYD1_k127_2331905_5 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000001087 261.0
SYD1_k127_2331905_6 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004764,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046417,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0055114,GO:0061458,GO:0071704,GO:1901576,GO:1901615 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000001525 225.0
SYD1_k127_2331905_7 Peptidase family M48 - - - 0.0000000000000000000000000000000000000005318 154.0
SYD1_k127_2331905_8 Periplasmic protein TonB links inner and outer membranes K03832 - - 0.0000000000000000000000000000000000004458 146.0
SYD1_k127_2343943_0 protein conserved in bacteria K19158 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0006139,GO:0006379,GO:0006401,GO:0006402,GO:0006417,GO:0006446,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016071,GO:0016458,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0017148,GO:0019222,GO:0019439,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0034641,GO:0034655,GO:0042710,GO:0043021,GO:0043024,GO:0043170,GO:0044010,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044764,GO:0044877,GO:0045947,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051704,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0098795,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:2000112,GO:2000113 - 0.000000000000000000000000000000000000000002454 156.0
SYD1_k127_2343943_1 Antitoxin component of a toxin-antitoxin (TA) module K19159 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0015643,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0042710,GO:0043565,GO:0044010,GO:0044764,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051704,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000002088 151.0
SYD1_k127_2343943_2 Lipase (class 3) - - - 0.000000000000000000000000000000000000266 155.0
SYD1_k127_238050_0 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003555 253.0
SYD1_k127_238050_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.00000000000000000000000000000000000000003049 156.0
SYD1_k127_238050_2 Diguanylate cyclase - - - 0.00000000000000000000004447 111.0
SYD1_k127_2383771_0 Belongs to the amidase family K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006235 372.0
SYD1_k127_2393057_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 GO:0000166,GO:0003674,GO:0003824,GO:0004748,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0034654,GO:0036094,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990204 1.17.4.1 3.909e-277 857.0
SYD1_k127_2393057_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 9.824e-198 621.0
SYD1_k127_2393057_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004101 602.0
SYD1_k127_2393057_3 Uncharacterized protein family UPF0029 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001587 236.0
SYD1_k127_2393057_4 S4 domain K14761 - - 0.000000000000000000139 90.0
SYD1_k127_2403471_0 chemotaxis protein K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006388 479.0
SYD1_k127_2403471_1 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006661 482.0
SYD1_k127_2403471_2 SMART CheW domain protein K03408 - - 0.000000000000000000000000000000000000000003549 161.0
SYD1_k127_2404763_0 Soluble NSF attachment protein, SNAP - - - 0.000000002502 68.0
SYD1_k127_2408593_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 4.312e-221 691.0
SYD1_k127_2408593_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 599.0
SYD1_k127_2408593_10 protein conserved in bacteria K09931 - - 0.000000000000000000000002283 111.0
SYD1_k127_2408593_2 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005299 463.0
SYD1_k127_2408593_3 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 385.0
SYD1_k127_2408593_4 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 355.0
SYD1_k127_2408593_5 riboflavin synthase alpha K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 286.0
SYD1_k127_2408593_6 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000001014 223.0
SYD1_k127_2408593_7 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000001832 213.0
SYD1_k127_2408593_8 phosphoglycerate mutase K15634 - 5.4.2.12 0.0000000000000000000000000000000000000000000137 171.0
SYD1_k127_2408593_9 Protein of unknown function (DUF3047) - - - 0.00000000000000000000000000000901 127.0
SYD1_k127_2417223_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000001302 226.0
SYD1_k127_2417223_1 NAD dependent epimerase dehydratase family K08678 - 4.1.1.35 0.000000001578 58.0
SYD1_k127_2417609_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 608.0
SYD1_k127_2417609_1 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.00000000000000000000000000000000000000000000000000000000000000000007943 233.0
SYD1_k127_2417609_2 Cyclase dehydrase - - - 0.0000000000000000000000000000000000000000002164 162.0
SYD1_k127_2417609_3 Belongs to the UPF0125 (RnfH) family K09801 - - 0.000000007498 62.0
SYD1_k127_2424935_0 Sulfite reductase K00381 - 1.8.1.2 4.998e-246 770.0
SYD1_k127_2424935_1 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003167 503.0
SYD1_k127_2424935_10 semialdehyde reductase K00020,K00042 - 1.1.1.31,1.1.1.60 0.000000000000000000000000000000000000000000000000000000000000006813 227.0
SYD1_k127_2424935_11 conserved protein ucp030820 - - - 0.000000000000000000000000000000000000122 148.0
SYD1_k127_2424935_12 CbiX K03795 - 4.99.1.3 0.000000000000000000000000000000726 125.0
SYD1_k127_2424935_2 With CysN catalyzes the formation of adenylylsulfate from sulfate and ATP K00957 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004035 488.0
SYD1_k127_2424935_3 LysR substrate binding domain K13634 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000463 377.0
SYD1_k127_2424935_4 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001903 291.0
SYD1_k127_2424935_5 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 288.0
SYD1_k127_2424935_6 Predicted permease YjgP/YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001091 292.0
SYD1_k127_2424935_7 Permease YjgP YjgQ family K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008136 258.0
SYD1_k127_2424935_8 Belongs to the precorrin methyltransferase family K02303 - 2.1.1.107 0.0000000000000000000000000000000000000000000000000000000000000000001674 238.0
SYD1_k127_2424935_9 esterase K01432 - 3.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000009918 230.0
SYD1_k127_2430515_0 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 1.998e-295 919.0
SYD1_k127_2430515_1 ABC transporter substrate-binding protein K01999 - - 6.045e-199 625.0
SYD1_k127_2430515_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 491.0
SYD1_k127_2430515_3 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000875 414.0
SYD1_k127_24969_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 363.0
SYD1_k127_24969_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002077 292.0
SYD1_k127_24969_2 Transposase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000002238 247.0
SYD1_k127_24969_3 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000004669 231.0
SYD1_k127_24969_4 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000002623 232.0
SYD1_k127_2499802_0 Hep Hag repeat protein K09942,K21449 - - 0.0000000000000000000000006928 120.0
SYD1_k127_2506818_0 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 573.0
SYD1_k127_2506818_1 Potassium transporter peripheral membrane component K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002871 516.0
SYD1_k127_2506818_2 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 366.0
SYD1_k127_2506818_3 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005397 250.0
SYD1_k127_2506818_4 Protein of unknown function (DUF3567) - - - 0.000000000005175 69.0
SYD1_k127_2506818_5 cobalamin synthesis protein - - - 0.0000428 51.0
SYD1_k127_2509239_0 Sigma-54 interaction domain K21405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 444.0
SYD1_k127_2509239_1 Membrane - - - 0.00000000000000008317 85.0
SYD1_k127_2569133_0 Putative Na+/H+ antiporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 500.0
SYD1_k127_2569133_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 GO:0003674,GO:0003824,GO:0004362,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006091,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009055,GO:0009636,GO:0009987,GO:0015036,GO:0015037,GO:0015038,GO:0015949,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0022900,GO:0031974,GO:0033554,GO:0034599,GO:0034641,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0055114,GO:0070013,GO:0070887,GO:0071704,GO:0097237,GO:0098754,GO:0098869,GO:1901360,GO:1990748 1.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 418.0
SYD1_k127_2569133_2 PFAM Thioredoxin K00384 - 1.8.1.9 0.000000000000000000000000573 108.0
SYD1_k127_2569133_3 Belongs to the anti-sigma-factor antagonist family - - - 0.00001929 51.0
SYD1_k127_2585683_0 Catalyzes the formation of succinate from succinate semialdehyde - - - 5.23e-210 661.0
SYD1_k127_2585683_1 phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008571 571.0
SYD1_k127_2585683_2 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005366 450.0
SYD1_k127_2585683_3 Periplasmic solute binding protein K02077 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008055 432.0
SYD1_k127_2585683_4 ABC-3 protein K02075 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006364 351.0
SYD1_k127_2585683_5 SMART PAS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 321.0
SYD1_k127_2591352_0 SMART transcription factor jumonji jmjC K18850 - 1.14.11.47 0.000000000000000000000000000000000000000000000000000000000000000000000003639 259.0
SYD1_k127_2591352_1 peptidyl-prolyl K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000001081 173.0
SYD1_k127_2625971_0 Outer membrane efflux protein - - - 0.0000000000000003621 87.0
SYD1_k127_2625971_1 - - - - 0.000000008477 64.0
SYD1_k127_2629036_0 ABC-type polar amino acid transport system, ATPase component K10004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008133 422.0
SYD1_k127_2629036_1 Bacterial periplasmic substrate-binding proteins K10001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 409.0
SYD1_k127_2629036_2 Binding-protein-dependent transport system inner membrane component K10002 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 318.0
SYD1_k127_2629036_3 Binding-protein-dependent transport system inner membrane component K02029,K10003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009268 302.0
SYD1_k127_2629036_4 Glycosyl transferase family 2 K12984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003688 299.0
SYD1_k127_2629036_5 TIGRFAM lipopolysaccharide heptosyltransferase I K02841 - - 0.000000000000000000000000000000000000000000000000000000000000001171 230.0
SYD1_k127_2629036_6 transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000009259 221.0
SYD1_k127_2629036_7 Fumarase C C-terminus K01744 - 4.3.1.1 0.0001011 44.0
SYD1_k127_263077_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 GO:0000166,GO:0003674,GO:0003824,GO:0004748,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0034654,GO:0036094,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990204 1.17.4.1 2.194e-242 758.0
SYD1_k127_263077_1 Negative regulator of K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043167,GO:0043169,GO:0043170,GO:0046872,GO:0046914,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 0.000000000000000000000000000000000000000000000000000522 191.0
SYD1_k127_263077_2 Cytochrome c assembly protein - - - 0.000000000000000000000000000000002146 132.0
SYD1_k127_263077_3 - K06950 - - 0.0000000184 59.0
SYD1_k127_2635145_0 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008554 325.0
SYD1_k127_2635145_1 PFAM YCII-related - - - 0.0000000000000000000002008 99.0
SYD1_k127_264327_0 Cytochrome c K02198 - - 6.907e-202 650.0
SYD1_k127_264327_1 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000004634 231.0
SYD1_k127_264327_2 TIGRFAM periplasmic protein thiol K02199 - - 0.00000000000000000000000000000000000000000008788 165.0
SYD1_k127_264327_3 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000005073 146.0
SYD1_k127_264327_4 subunit of a heme lyase K02200 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015035,GO:0015036,GO:0016020,GO:0016043,GO:0016491,GO:0016667,GO:0017004,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0065003,GO:0071840,GO:0071944,GO:0098552,GO:0098567 - 0.000000000000000000000000008027 114.0
SYD1_k127_264327_5 Tetratricopeptide repeat K02200 - - 0.00000000000000000000000005001 122.0
SYD1_k127_264327_6 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.0000000000000000000857 103.0
SYD1_k127_264327_7 - - - - 0.000000000009785 66.0
SYD1_k127_2655782_0 chemotaxis, protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000164 227.0
SYD1_k127_2673980_0 Glycosyl transferase family 21 K11936 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001037 285.0
SYD1_k127_2673980_1 Cellulose biosynthesis protein BcsG - - - 0.000000002789 64.0
SYD1_k127_2690778_0 Adenylate cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000002247 244.0
SYD1_k127_269786_0 PFAM binding-protein-dependent transport systems inner membrane component K02042 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002905 378.0
SYD1_k127_269786_1 Binding-protein-dependent transport system inner membrane component K02042 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 341.0
SYD1_k127_269786_2 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000007786 261.0
SYD1_k127_269786_3 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002922 250.0
SYD1_k127_2738779_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 1.104e-234 732.0
SYD1_k127_2738779_1 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 8.17e-204 647.0
SYD1_k127_2738779_10 PFAM Sulphur oxidation protein SoxZ K17227 - - 0.00000000000000000000000000000002458 128.0
SYD1_k127_2738779_11 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000005518 72.0
SYD1_k127_2738779_12 Metallo-beta-lactamase superfamily - - - 0.0000003811 61.0
SYD1_k127_2738779_2 cytochrome C peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 514.0
SYD1_k127_2738779_3 Phosphate-selective porin O and P - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 496.0
SYD1_k127_2738779_4 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008823 343.0
SYD1_k127_2738779_5 Metallo-beta-lactamase superfamily K01138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004682 311.0
SYD1_k127_2738779_6 Sulphur oxidation protein SoxZ K17226 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003888 284.0
SYD1_k127_2738779_7 Cytochrome c K17223 - - 0.000000000000000000000000000000000000000000000000000000000000000007669 231.0
SYD1_k127_2738779_8 PFAM FMN-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000113 199.0
SYD1_k127_2738779_9 Sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000116 152.0
SYD1_k127_2765615_0 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic - - - 0.000000000000000000000000000000000000000000004414 174.0
SYD1_k127_2765615_1 Major facilitator superfamily K08224 - - 0.00000000000000000000000000000001435 130.0
SYD1_k127_2782866_0 extracellular solute-binding protein - - - 1.789e-271 855.0
SYD1_k127_2782866_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.283e-198 629.0
SYD1_k127_2782866_2 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000334 540.0
SYD1_k127_2782866_3 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004537 454.0
SYD1_k127_2782866_4 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 451.0
SYD1_k127_2782866_5 isochorismatase hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000716 241.0
SYD1_k127_2782866_6 Bacterial protein of unknown function (DUF882) - - - 0.000000000000000000000000000000000000000000000000000000000000000001933 233.0
SYD1_k127_2782866_7 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.0000000000000000000000000000000000000000000000000003434 189.0
SYD1_k127_2782866_8 Domain in histone-like proteins of HNS family K03746 - - 0.0000000000001002 76.0
SYD1_k127_2801947_0 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.0000000000000000000000000000000000000000000000000000000000000000000005531 246.0
SYD1_k127_2801947_1 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases - - - 0.000000000000000000000000000000000000000000000000000000000000006221 225.0
SYD1_k127_2801947_2 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000001354 184.0
SYD1_k127_282386_0 Acetyl propionyl-CoA carboxylase alpha subunit K01968 - 6.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004455 352.0
SYD1_k127_2840668_0 Ligand-gated ion channel K02030,K10036 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007994 378.0
SYD1_k127_2840668_1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005506 282.0
SYD1_k127_2840668_2 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) - - - 0.0000000000000002369 81.0
SYD1_k127_2840668_3 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0000008791 58.0
SYD1_k127_2857260_0 LVIVD repeat - - - 0.0 1758.0
SYD1_k127_2857260_1 - - - - 2.702e-222 711.0
SYD1_k127_2857260_2 Haem-degrading - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005708 465.0
SYD1_k127_2857260_3 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005567 385.0
SYD1_k127_2857260_4 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.0002425 44.0
SYD1_k127_2858953_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 GO:0000003,GO:0001655,GO:0001822,GO:0001889,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004457,GO:0004611,GO:0004613,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006066,GO:0006071,GO:0006082,GO:0006089,GO:0006090,GO:0006091,GO:0006094,GO:0006109,GO:0006111,GO:0006113,GO:0006139,GO:0006163,GO:0006464,GO:0006629,GO:0006631,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007028,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007296,GO:0007610,GO:0008150,GO:0008152,GO:0008906,GO:0009056,GO:0009058,GO:0009062,GO:0009117,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009179,GO:0009185,GO:0009199,GO:0009205,GO:0009259,GO:0009410,GO:0009605,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010646,GO:0010647,GO:0010675,GO:0010906,GO:0014070,GO:0014074,GO:0015036,GO:0015980,GO:0016042,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016054,GO:0016301,GO:0016310,GO:0016491,GO:0016614,GO:0016651,GO:0016667,GO:0016668,GO:0016740,GO:0016772,GO:0016773,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017001,GO:0017144,GO:0018130,GO:0018991,GO:0019098,GO:0019222,GO:0019249,GO:0019318,GO:0019319,GO:0019320,GO:0019362,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019516,GO:0019538,GO:0019541,GO:0019543,GO:0019563,GO:0019626,GO:0019637,GO:0019659,GO:0019660,GO:0019661,GO:0019666,GO:0019674,GO:0019693,GO:0019751,GO:0019752,GO:0019953,GO:0022412,GO:0022414,GO:0023051,GO:0023056,GO:0030145,GO:0030154,GO:0030703,GO:0030855,GO:0031323,GO:0031667,GO:0031960,GO:0031974,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032868,GO:0032869,GO:0032870,GO:0033993,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035690,GO:0036211,GO:0042221,GO:0042493,GO:0042594,GO:0042737,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043412,GO:0043434,GO:0043436,GO:0043687,GO:0043900,GO:0043903,GO:0043949,GO:0043950,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044267,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045471,GO:0046031,GO:0046034,GO:0046164,GO:0046174,GO:0046364,GO:0046365,GO:0046394,GO:0046395,GO:0046434,GO:0046459,GO:0046483,GO:0046496,GO:0046677,GO:0046683,GO:0046700,GO:0046872,GO:0046914,GO:0047134,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048545,GO:0048562,GO:0048568,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048646,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051186,GO:0051384,GO:0051591,GO:0051704,GO:0051716,GO:0055086,GO:0055114,GO:0060429,GO:0061005,GO:0061008,GO:0062012,GO:0065007,GO:0070013,GO:0070365,GO:0070887,GO:0071236,GO:0071310,GO:0071361,GO:0071375,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071466,GO:0071495,GO:0071548,GO:0071549,GO:0071704,GO:0071840,GO:0072001,GO:0072071,GO:0072329,GO:0072330,GO:0072521,GO:0072524,GO:0080090,GO:0097159,GO:0097237,GO:0097305,GO:0097306,GO:0097327,GO:1901135,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1901617,GO:1901652,GO:1901653,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902531,GO:1902533 4.1.1.32 0.0 1071.0
SYD1_k127_2858953_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 2.55e-321 992.0
SYD1_k127_2858953_2 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 387.0
SYD1_k127_2858953_3 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003696 354.0
SYD1_k127_2858953_4 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003333 272.0
SYD1_k127_2858953_5 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000000000000000001395 194.0
SYD1_k127_2858953_6 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000006759 104.0
SYD1_k127_2858953_7 ATP synthase I chain K02116 - - 0.000001142 56.0
SYD1_k127_285960_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 609.0
SYD1_k127_286194_0 Aminoglycoside phosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000731 481.0
SYD1_k127_286194_1 Phosphoglycerate mutase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005972 249.0
SYD1_k127_286194_2 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000009299 222.0
SYD1_k127_286194_3 Transcriptional regulator, LysR family - - - 0.000000000000000000000000000000000000000007927 156.0
SYD1_k127_286194_4 Transcriptional regulator, LysR family - - - 0.00000000000000001715 83.0
SYD1_k127_2909623_0 Four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate K01955 - 6.3.5.5 0.0 1814.0
SYD1_k127_2909623_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0 1020.0
SYD1_k127_2909623_10 Membrane - - - 0.0000000000000000000000000009599 117.0
SYD1_k127_2909623_11 Proteolipid membrane potential modulator - - - 0.00000000000000000000000000575 111.0
SYD1_k127_2909623_12 Domain of unknown function (DUF4149) - - - 0.00000006879 60.0
SYD1_k127_2909623_2 acyl-CoA dehydrogenase K20035 - - 1.005e-268 839.0
SYD1_k127_2909623_3 Carbamoyl-phosphate synthetase glutamine chain K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008642 547.0
SYD1_k127_2909623_4 Electron transfer flavoprotein K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 471.0
SYD1_k127_2909623_5 membrane protein, TerC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 297.0
SYD1_k127_2909623_6 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 292.0
SYD1_k127_2909623_7 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002476 276.0
SYD1_k127_2909623_8 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001541 252.0
SYD1_k127_2909623_9 CRS1_YhbY K07574 - - 0.00000000000000000000000000000001968 129.0
SYD1_k127_2920587_0 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000005653 209.0
SYD1_k127_293739_0 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 301.0
SYD1_k127_293739_1 Photosynthesis system II assembly factor YCF48 - - - 0.00000000000000000000000000000000000000000000000000134 198.0
SYD1_k127_2981445_0 FMN binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 573.0
SYD1_k127_2981445_1 KR domain K13775 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 363.0
SYD1_k127_2981445_2 Protein of Unknown function (DUF2784) - - - 0.000000000000000000000000000000006647 131.0
SYD1_k127_299333_0 Major facilitator superfamily K08224 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 423.0
SYD1_k127_299333_1 LysR substrate binding domain - - - 0.000000000000004942 77.0
SYD1_k127_300825_0 Oligopeptide/dipeptide transporter, C-terminal region K02031,K02032 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000946 284.0
SYD1_k127_300825_1 Lytic transglycosylase K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003238 273.0
SYD1_k127_303497_0 RNA binding K06959 - - 2.467e-299 933.0
SYD1_k127_303497_1 helicase K03722 - 3.6.4.12 5.558e-202 648.0
SYD1_k127_303497_2 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus K03821 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 6.692e-200 639.0
SYD1_k127_303497_3 Belongs to the thiolase family K00626 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.9 2.288e-196 617.0
SYD1_k127_303497_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004105 267.0
SYD1_k127_303497_5 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000153 268.0
SYD1_k127_303497_6 Belongs to the multicopper oxidase YfiH RL5 family K05810 GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016679,GO:0016682,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0046983,GO:0055114 - 0.0000000000000000000000000000000000000000000000001973 186.0
SYD1_k127_303497_7 Protein of unknown function (DUF465) - - - 0.00000000000000000001063 93.0
SYD1_k127_303497_8 - - - - 0.000000000001044 76.0
SYD1_k127_303577_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 2.408e-206 677.0
SYD1_k127_303577_1 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 552.0
SYD1_k127_303577_10 Putative phosphatase (DUF442) K17218 - 1.8.5.4 0.000000000000000000000003576 106.0
SYD1_k127_303577_2 Phosphotransferase K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004551 366.0
SYD1_k127_303577_3 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 344.0
SYD1_k127_303577_4 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009961 332.0
SYD1_k127_303577_5 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001187 277.0
SYD1_k127_303577_6 Sugar (and other) transporter K07552 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002531 278.0
SYD1_k127_303577_7 PFAM Nucleotidyl transferase K00992 - 2.7.7.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000004673 261.0
SYD1_k127_303577_8 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000005689 240.0
SYD1_k127_303577_9 Domain of unknown function (DUF1857) - - - 0.000000000000000000000000000256 122.0
SYD1_k127_3041020_0 Bestrophin, RFP-TM, chloride channel K08994 - - 0.00001098 48.0
SYD1_k127_304201_0 protein transport across the cell outer membrane K02455,K02653,K10934 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0016020,GO:0032940,GO:0033036,GO:0042886,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098776 - 0.0000000000000000002261 93.0
SYD1_k127_3050039_0 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 378.0
SYD1_k127_3050039_1 TIGRFAM type I secretion membrane fusion protein, HlyD family K12542,K16300 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 346.0
SYD1_k127_3050039_2 TIGRFAM type I secretion system ATPase K12541 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002095 264.0
SYD1_k127_3050039_3 Outer membrane efflux protein K12543 - - 0.000000000000000000000000000000000000000000001576 181.0
SYD1_k127_3050039_4 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.00000009933 64.0
SYD1_k127_3134530_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 3.119e-263 822.0
SYD1_k127_3134530_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 1.192e-196 625.0
SYD1_k127_3134530_10 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007933 266.0
SYD1_k127_3134530_11 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000000000001147 202.0
SYD1_k127_3134530_12 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.000000000000000000000000000000000000000000000000000008941 197.0
SYD1_k127_3134530_13 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000000000000001665 171.0
SYD1_k127_3134530_14 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000000000000000000000000000000000000006594 158.0
SYD1_k127_3134530_15 Domain of unknown function (DUF1967) - - - 0.000000000000000000000000000000000000009416 145.0
SYD1_k127_3134530_16 Cytochrome c assembly protein - - - 0.00000000000000000001524 99.0
SYD1_k127_3134530_2 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway K02454,K02504,K02652,K12276 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009059 542.0
SYD1_k127_3134530_3 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 520.0
SYD1_k127_3134530_4 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006289 510.0
SYD1_k127_3134530_5 CBS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 417.0
SYD1_k127_3134530_6 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005527 376.0
SYD1_k127_3134530_7 Type II secretion system (T2SS), protein F K02653 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008150,GO:0009297,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0016020,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0032940,GO:0033036,GO:0042886,GO:0043711,GO:0044085,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0098776 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000412 317.0
SYD1_k127_3134530_8 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000429 301.0
SYD1_k127_3134530_9 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02464,K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000002115 272.0
SYD1_k127_3151054_0 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 375.0
SYD1_k127_3151054_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000001548 70.0
SYD1_k127_3197461_0 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000000000000000000000008201 181.0
SYD1_k127_3197461_1 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.0000000000000000000000000000000000000000000003086 167.0
SYD1_k127_3197461_2 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 - - 0.0000000000000000000000000000000000000001449 156.0
SYD1_k127_3197461_3 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 - - 0.000000000000000000000000002702 112.0
SYD1_k127_320388_0 TonB dependent receptor K02014 - - 9.427e-244 764.0
SYD1_k127_3210686_0 Acyltransferase ws dgat mgat K00635 - 2.3.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 306.0
SYD1_k127_3210686_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000005937 223.0
SYD1_k127_3210686_2 PAP2 superfamily K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000006981 199.0
SYD1_k127_326556_0 Protein of unknown function (DUF1298) K00635 - 2.3.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005626 542.0
SYD1_k127_326556_1 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002668 308.0
SYD1_k127_326556_2 cellulose synthase - - - 0.000000000000000000000000000000000000000000000000003729 188.0
SYD1_k127_3329628_0 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 291.0
SYD1_k127_3329628_1 PFAM HAMP domain, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, His Kinase A (phosphoacceptor) domain, Two-component sensor kinase N-terminal K07649 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000003152 238.0
SYD1_k127_3329628_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0000000000000000000000000000001481 125.0
SYD1_k127_3456110_0 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001371 276.0
SYD1_k127_3456110_1 peptidyl-tyrosine sulfation - - - 0.000249 53.0
SYD1_k127_3466210_0 Catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time K02337 - 2.7.7.7 1.467e-272 849.0
SYD1_k127_3477159_0 ABC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 496.0
SYD1_k127_3477159_1 COG1960 Acyl-CoA dehydrogenases K00255 - 1.3.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002931 439.0
SYD1_k127_3477159_10 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000008655 202.0
SYD1_k127_3477159_11 protein, possibly involved in aromatic compounds catabolism K19222 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016289,GO:0016787,GO:0016788,GO:0016790,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0061522,GO:0071704,GO:1901576,GO:1901661,GO:1901663 3.1.2.28 0.0000000000000000000000000000000000000000000000000002048 188.0
SYD1_k127_3477159_12 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.0000000000000000000000000000000000000006388 152.0
SYD1_k127_3477159_13 negative regulation of translational initiation - - - 0.00000000000000000000008167 103.0
SYD1_k127_3477159_14 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000006427 73.0
SYD1_k127_3477159_15 - - - - 0.0000000007297 64.0
SYD1_k127_3477159_2 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 427.0
SYD1_k127_3477159_3 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 426.0
SYD1_k127_3477159_4 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 348.0
SYD1_k127_3477159_5 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009753 338.0
SYD1_k127_3477159_6 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005658 293.0
SYD1_k127_3477159_7 Histidine kinase K20971,K20974 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000005893 268.0
SYD1_k127_3477159_8 Spermidine synthase K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000003616 228.0
SYD1_k127_3477159_9 Leucine carboxyl methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000009672 229.0
SYD1_k127_3491371_0 Transport of potassium into the cell K03549 - - 1.569e-264 828.0
SYD1_k127_3491371_1 AMP-binding enzyme C-terminal domain K00666,K20034 - 6.2.1.44 4.555e-239 750.0
SYD1_k127_3491371_10 Psort location CytoplasmicMembrane, score 10.00 K03975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006224 269.0
SYD1_k127_3491371_11 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007519 275.0
SYD1_k127_3491371_12 peptidylprolyl isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000003671 244.0
SYD1_k127_3491371_13 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000826 223.0
SYD1_k127_3491371_14 Histidine kinase K02484,K07645 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000001225 209.0
SYD1_k127_3491371_15 probably involved in intracellular septation K06190 - - 0.00000000000000000000000000000000000000000000000000000003947 202.0
SYD1_k127_3491371_16 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000008949 193.0
SYD1_k127_3491371_17 Transport and Golgi organisation 2 - - - 0.0000000000000000000000000000000000000000000000003077 186.0
SYD1_k127_3491371_18 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000003283 181.0
SYD1_k127_3491371_19 DNA polymerase III K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000001162 184.0
SYD1_k127_3491371_2 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007624 584.0
SYD1_k127_3491371_20 Belongs to the GcvT family K06980 - - 0.000000000000000000000000000000000000000001272 168.0
SYD1_k127_3491371_21 PFAM Ankyrin K06867 - - 0.000000000000000000000000000000000000003739 154.0
SYD1_k127_3491371_22 Stress responsive A/B Barrel Domain - - - 0.000000000000000000000000000000008676 129.0
SYD1_k127_3491371_23 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000002068 109.0
SYD1_k127_3491371_24 Pilus assembly protein PilZ K02676 - - 0.00000000000000000000004018 102.0
SYD1_k127_3491371_25 Belongs to the BolA IbaG family K05527 - - 0.0000000000000000001198 92.0
SYD1_k127_3491371_3 Chemotaxis sensory transducer K03776 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 440.0
SYD1_k127_3491371_4 Belongs to the UPF0061 (SELO) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 434.0
SYD1_k127_3491371_5 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 367.0
SYD1_k127_3491371_6 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 346.0
SYD1_k127_3491371_7 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 342.0
SYD1_k127_3491371_8 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K00997,K01207 - 2.7.8.7,3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004166 343.0
SYD1_k127_3491371_9 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 298.0
SYD1_k127_3493438_0 haemagglutination activity domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005286 315.0
SYD1_k127_3493438_1 Hemolysin activation secretion protein - - - 0.000000000000000000000000003098 120.0
SYD1_k127_3500495_0 biosynthesis protein E K06139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004931 507.0
SYD1_k127_3500495_1 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137 - 1.3.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000551 368.0
SYD1_k127_3500495_2 May be involved in the transport of PQQ or its precursor to the periplasm K06136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004109 366.0
SYD1_k127_3500495_3 Transport Permease Protein K01992 - - 0.000000000000000000000000000000000000000000000000001303 193.0
SYD1_k127_3500495_4 ATPases associated with a variety of cellular activities K01990,K09695,K11050 - - 0.000000000000000000000000000000000000000000000002791 182.0
SYD1_k127_3500495_5 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000002432 115.0
SYD1_k127_3500495_6 PFAM coenzyme PQQ synthesis D K06138 - - 0.0000000000000000000000001525 110.0
SYD1_k127_3500495_7 Required for coenzyme pyrroloquinoline quinone (PQQ) biosynthesis. PQQ is probably formed by cross-linking a specific glutamate to a specific tyrosine residue and excising these residues from the peptide K06135 - - 0.000000382 52.0
SYD1_k127_35009_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11745,K11747 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006885,GO:0008150,GO:0008324,GO:0009636,GO:0009987,GO:0010033,GO:0015075,GO:0015077,GO:0015079,GO:0015291,GO:0015318,GO:0015503,GO:0015643,GO:0015672,GO:0016020,GO:0016021,GO:0019899,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042592,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0048878,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051595,GO:0055067,GO:0055080,GO:0055085,GO:0065007,GO:0065008,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:1901654,GO:1901700 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 323.0
SYD1_k127_35009_1 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000452 306.0
SYD1_k127_35009_2 PFAM MscS Mechanosensitive ion channel - - - 0.000000004033 67.0
SYD1_k127_3507669_0 Dehydrogenase K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 5.646e-231 722.0
SYD1_k127_3507669_1 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 1.598e-197 623.0
SYD1_k127_3507669_2 PFAM AFG1-family ATPase K06916 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004697 528.0
SYD1_k127_3507669_3 Dehydrogenase E1 component K00164 - 1.2.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 443.0
SYD1_k127_3511818_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 7.537e-209 653.0
SYD1_k127_3511818_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007488 576.0
SYD1_k127_3511818_10 Modulates RecA activity K03565 - - 0.0000000000003856 76.0
SYD1_k127_3511818_11 general secretion pathway protein K02650 - - 0.00000000007246 66.0
SYD1_k127_3511818_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0016874,GO:0016877,GO:0016878,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000782 521.0
SYD1_k127_3511818_3 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 513.0
SYD1_k127_3511818_4 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000001774 231.0
SYD1_k127_3511818_5 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000000000003045 192.0
SYD1_k127_3511818_6 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000000000000000000249 181.0
SYD1_k127_3511818_7 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.0000000000000000000000000000000000000000000000006601 180.0
SYD1_k127_3511818_8 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000162 170.0
SYD1_k127_3511818_9 Belongs to the CinA family K03743 - 3.5.1.42 0.00000000000000000000000000000000000000003048 158.0
SYD1_k127_3513165_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 5.241e-208 656.0
SYD1_k127_3513165_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.000004207 49.0
SYD1_k127_3537769_0 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 364.0
SYD1_k127_3537769_1 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 348.0
SYD1_k127_3537769_2 type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005764 274.0
SYD1_k127_3537769_3 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.00000000000000000000000000000000000000000000000000000000001593 209.0
SYD1_k127_3537769_4 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 0.0000000000000000000000000001558 122.0
SYD1_k127_3538097_0 PrkA AAA domain K07180 - - 0.0 1015.0
SYD1_k127_3538097_1 acyl-CoA dehydrogenase K00249,K06445 - 1.3.8.7 1.351e-319 998.0
SYD1_k127_3538097_10 decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin K00817,K02225 - 2.6.1.9 0.00000000000000000000000001136 119.0
SYD1_k127_3538097_11 Tetratricopeptide repeat - - - 0.00000000000000000002431 101.0
SYD1_k127_3538097_2 abc transporter K06020 - 3.6.3.25 1.871e-308 950.0
SYD1_k127_3538097_3 SpoVR like protein - - - 9.194e-200 633.0
SYD1_k127_3538097_4 Belongs to the UPF0229 family K09786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 431.0
SYD1_k127_3538097_5 Saccharopine dehydrogenase NADP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007374 423.0
SYD1_k127_3538097_6 Pyridine nucleotide-disulphide oxidoreductase K05297,K12265 - 1.18.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005179 362.0
SYD1_k127_3538097_7 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 331.0
SYD1_k127_3538097_8 protein conserved in bacteria K09922 - - 0.0000000000000000000000000000000000000000000000000000000002673 203.0
SYD1_k127_3538097_9 negative regulation of translational initiation - - - 0.0000000000000000000000000000002043 129.0
SYD1_k127_3546622_0 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007153 279.0
SYD1_k127_3546622_1 Electron transport protein SCO1 SenC K07152 - - 0.000000000000000000000000000000000000000000000000000000001372 205.0
SYD1_k127_3546622_3 RNA polymerase sigma factor RpoH K03089 - - 0.000000007071 57.0
SYD1_k127_3552367_0 PFAM Ornithine cyclodeaminase mu-crystallin K01750 - 4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035 335.0
SYD1_k127_3552367_1 Belongs to the arginase family K01476,K01480,K12255,K18459 - 3.5.3.1,3.5.3.11,3.5.3.17,3.5.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005044 297.0
SYD1_k127_3552367_2 Acetoacetate decarboxylase (ADC) - - - 0.000000000000000000000000000000000000000002318 163.0
SYD1_k127_3552367_3 flavoprotein involved in K transport - - - 0.00000000000000000000000001596 109.0
SYD1_k127_3554401_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00646,K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0016740,GO:0016746,GO:0016747,GO:0033817 2.3.1.179 8.068e-206 646.0
SYD1_k127_3554401_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009117 561.0
SYD1_k127_3554401_10 Uroporphyrin-iii c tetrapyrrole (Corrin porphyrin) methyltransferase K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000001675 209.0
SYD1_k127_3554401_11 PFAM MucB RseB family protein K03598 - - 0.0000000000000000000000000000000000000000000004457 179.0
SYD1_k127_3554401_12 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000000000006257 131.0
SYD1_k127_3554401_13 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000000005414 102.0
SYD1_k127_3554401_14 Uncharacterized ACR, COG1399 K07040 - - 0.00000000001926 72.0
SYD1_k127_3554401_15 An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E K03597 GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0010556,GO:0016989,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 - 0.00003753 54.0
SYD1_k127_3554401_2 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 476.0
SYD1_k127_3554401_3 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003745 439.0
SYD1_k127_3554401_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007963 410.0
SYD1_k127_3554401_5 Malonyl CoA-acyl carrier protein transacylase K00645,K15355 GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008509 368.0
SYD1_k127_3554401_6 peptidase, S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004524 335.0
SYD1_k127_3554401_7 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005885 324.0
SYD1_k127_3554401_8 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001563 256.0
SYD1_k127_3554401_9 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000000000002806 241.0
SYD1_k127_3583861_0 PFAM PhoH family protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006625 434.0
SYD1_k127_3583861_1 PFAM HAMP domain, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, His Kinase A (phosphoacceptor) domain, Two-component sensor kinase N-terminal K07649 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007232 325.0
SYD1_k127_3583861_2 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000000000001292 143.0
SYD1_k127_3584827_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000572 395.0
SYD1_k127_3584827_1 PFAM Amidase K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003201 272.0
SYD1_k127_3584827_2 peptidyl-tyrosine sulfation - - - 0.0000000000000006288 91.0
SYD1_k127_3606942_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007558 596.0
SYD1_k127_3617813_0 Acetyl-coenzyme A transporter 1 K08218 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004703 415.0
SYD1_k127_3617813_1 KR domain - - - 0.0000000000000000000000000000000000000000000000000000603 196.0
SYD1_k127_3617813_2 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.000000000000000000000000000000000000000000000007297 172.0
SYD1_k127_3617813_3 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000001978 81.0
SYD1_k127_3626625_0 PFAM Glycosyl transferase, family 4 K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000000000000000002426 259.0
SYD1_k127_3641467_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005151 539.0
SYD1_k127_3641467_1 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008854 440.0
SYD1_k127_3641467_2 hydroxypyruvate reductase K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 358.0
SYD1_k127_3641467_3 Glutamine amidotransferases class-II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 347.0
SYD1_k127_3641467_4 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 341.0
SYD1_k127_3641467_5 Putative aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005996 321.0
SYD1_k127_3641467_6 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000000000000000000000000000000000000000000002878 235.0
SYD1_k127_3641467_7 Protein of unknown function (DUF3025) - - - 0.000000000000000000000000000000000001491 148.0
SYD1_k127_3641467_8 peptidase dimerisation domain protein - - - 0.00000000000001113 78.0
SYD1_k127_3641467_9 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.0000000000002729 74.0
SYD1_k127_3653679_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 480.0
SYD1_k127_3653679_1 Belongs to the mannose-6-phosphate isomerase type 2 family K16011 - 2.7.7.13,5.3.1.8 0.00000000000001667 73.0
SYD1_k127_3661585_0 Sigma-54 interaction domain K21405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008828 334.0
SYD1_k127_3661585_1 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000006744 181.0
SYD1_k127_3663586_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 552.0
SYD1_k127_3663586_1 Belongs to the DegT DnrJ EryC1 family K20429 - 2.6.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003147 532.0
SYD1_k127_3663586_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006037 404.0
SYD1_k127_3663586_3 Lipopolysaccharide heptosyltransferase III K02849 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0071704,GO:0071967,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006086 313.0
SYD1_k127_3663586_4 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 299.0
SYD1_k127_3663586_5 Bacterial DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000003346 248.0
SYD1_k127_3663586_6 O-linked N-acetylglucosamine transferase, SPINDLY family - - - 0.00000000000000000000000000000000000000000000000000000005732 218.0
SYD1_k127_3670464_0 Required for chromosome condensation and partitioning K03529 - - 5.032e-315 1002.0
SYD1_k127_3670464_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 3.397e-228 726.0
SYD1_k127_3670464_10 Purine nucleoside phosphorylase involved in purine salvage K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 316.0
SYD1_k127_3670464_11 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004179 298.0
SYD1_k127_3670464_12 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016651,GO:0016657,GO:0018130,GO:0019438,GO:0033739,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000000000003906 229.0
SYD1_k127_3670464_13 NYN domain - - - 0.00000000000000000000000000000000000000000000000001173 188.0
SYD1_k127_3670464_14 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins - - - 0.000000000000000000000000000001464 134.0
SYD1_k127_3670464_15 Belongs to the ArsC family - - - 0.000000000000000000000000001638 115.0
SYD1_k127_3670464_16 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004828,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006434,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0010467,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.1.1.11 0.00000000000000000001138 91.0
SYD1_k127_3670464_17 GIY-YIG type nucleases (URI domain) K07461 - - 0.000000000000009413 79.0
SYD1_k127_3670464_2 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 603.0
SYD1_k127_3670464_3 Amp-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006489 582.0
SYD1_k127_3670464_4 ABC transporter, ATP-binding protein K06158 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 527.0
SYD1_k127_3670464_5 PFAM aminotransferase, class I K14267 - 2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002912 491.0
SYD1_k127_3670464_6 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 464.0
SYD1_k127_3670464_7 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004458 466.0
SYD1_k127_3670464_8 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 436.0
SYD1_k127_3670464_9 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008487 337.0
SYD1_k127_3672836_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 564.0
SYD1_k127_3672836_1 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000001103 230.0
SYD1_k127_3672836_2 Protein of unknown function (DUF2804) - - - 0.000000000000000000000000000000000000000000000000000000000003711 221.0
SYD1_k127_3672836_3 Serine aminopeptidase, S33 K01259 - 3.4.11.5 0.0000000000000000000000000003416 126.0
SYD1_k127_3672836_4 Rubredoxin - - - 0.00000000000000000000000002631 108.0
SYD1_k127_3708401_0 Belongs to the enoyl-CoA hydratase isomerase family K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 5.471e-312 970.0
SYD1_k127_3708401_1 converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA - - - 1.054e-274 865.0
SYD1_k127_3708401_10 Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA - - - 0.00001482 58.0
SYD1_k127_3708401_2 Ammonium Transporter K03320,K06580 - - 6.978e-205 642.0
SYD1_k127_3708401_3 Thiolase, C-terminal domain - - - 4.925e-202 636.0
SYD1_k127_3708401_4 PFAM Cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 589.0
SYD1_k127_3708401_5 NAD dependent epimerase/dehydratase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008489 274.0
SYD1_k127_3708401_6 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005576 260.0
SYD1_k127_3708401_7 Glycosyltransferase (GlcNAc) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003197 275.0
SYD1_k127_3708401_8 Protein of unknown function, DUF599 - - - 0.0000000000000000000000000000000000000000000000000000000000000000004007 236.0
SYD1_k127_3708401_9 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000001113 222.0
SYD1_k127_3716689_0 Belongs to the GSP D family K02280 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 306.0
SYD1_k127_3716689_1 Pilus assembly protein K02282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002834 256.0
SYD1_k127_3716689_2 TIGRFAM Flp pilus assembly protein CpaB K02279 - - 0.0000000009616 64.0
SYD1_k127_3716689_3 type II secretion system protein E K02283 - - 0.0000001456 57.0
SYD1_k127_3723506_0 ATPase components of ABC transporters with duplicated ATPase domains - - - 1.195e-251 786.0
SYD1_k127_3723506_1 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 425.0
SYD1_k127_3723506_2 PFAM peptidase U61, LD-carboxypeptidase A K01297 - 3.4.17.13 0.00000000000000000000000000000000000000000000000000000000007019 216.0
SYD1_k127_3729243_0 Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA K01638 - 2.3.3.9 0.0 1195.0
SYD1_k127_3729243_1 LysE type translocator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004851 274.0
SYD1_k127_3729243_2 Low affinity iron permease - - - 0.0000000000000000000000000000000000000000000000000000000000007711 219.0
SYD1_k127_3729243_3 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000008623 190.0
SYD1_k127_3733248_0 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 519.0
SYD1_k127_3733248_1 Periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 382.0
SYD1_k127_3733248_2 PFAM oxidoreductase, molybdopterin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004778 381.0
SYD1_k127_3733248_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006258 342.0
SYD1_k127_3733248_4 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008843 345.0
SYD1_k127_3733248_5 C-terminal domain of 1-Cys peroxiredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 294.0
SYD1_k127_3733248_6 Cytochrome b/b6/petB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001741 244.0
SYD1_k127_3733248_7 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001188 231.0
SYD1_k127_3733248_8 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000001919 102.0
SYD1_k127_3733248_9 DNA photolyase K01669 - 4.1.99.3 0.000000000000000007451 85.0
SYD1_k127_3737797_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 1.755e-294 907.0
SYD1_k127_3737797_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 296.0
SYD1_k127_375607_0 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 494.0
SYD1_k127_375607_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 449.0
SYD1_k127_375607_2 Alpha/beta hydrolase family K03821 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003956 424.0
SYD1_k127_375607_3 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006148 404.0
SYD1_k127_375607_4 PaaX-like protein C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001167 249.0
SYD1_k127_380099_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1267.0
SYD1_k127_380099_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 588.0
SYD1_k127_380099_10 MOSC domain - - - 0.000000000000000000000000000000000000000000002025 173.0
SYD1_k127_380099_11 Protein of unknown function (DUF1499) - - - 0.00000000000000000000000000000002652 132.0
SYD1_k127_380099_12 Protein of unknown function (DUF2805) - - - 0.00000000000000000000000000006268 117.0
SYD1_k127_380099_13 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000000003392 114.0
SYD1_k127_380099_14 protein conserved in bacteria K09796 - - 0.00000000000000000000001374 107.0
SYD1_k127_380099_15 Ribosomal protein L34 K02914 - - 0.00000000000001992 75.0
SYD1_k127_380099_16 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 GO:0000003,GO:0001655,GO:0001822,GO:0001889,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004457,GO:0004611,GO:0004613,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006066,GO:0006071,GO:0006082,GO:0006089,GO:0006090,GO:0006091,GO:0006094,GO:0006109,GO:0006111,GO:0006113,GO:0006139,GO:0006163,GO:0006464,GO:0006629,GO:0006631,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007028,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007296,GO:0007610,GO:0008150,GO:0008152,GO:0008906,GO:0009056,GO:0009058,GO:0009062,GO:0009117,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009179,GO:0009185,GO:0009199,GO:0009205,GO:0009259,GO:0009410,GO:0009605,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010646,GO:0010647,GO:0010675,GO:0010906,GO:0014070,GO:0014074,GO:0015036,GO:0015980,GO:0016042,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016054,GO:0016301,GO:0016310,GO:0016491,GO:0016614,GO:0016651,GO:0016667,GO:0016668,GO:0016740,GO:0016772,GO:0016773,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017001,GO:0017144,GO:0018130,GO:0018991,GO:0019098,GO:0019222,GO:0019249,GO:0019318,GO:0019319,GO:0019320,GO:0019362,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019516,GO:0019538,GO:0019541,GO:0019543,GO:0019563,GO:0019626,GO:0019637,GO:0019659,GO:0019660,GO:0019661,GO:0019666,GO:0019674,GO:0019693,GO:0019751,GO:0019752,GO:0019953,GO:0022412,GO:0022414,GO:0023051,GO:0023056,GO:0030145,GO:0030154,GO:0030703,GO:0030855,GO:0031323,GO:0031667,GO:0031960,GO:0031974,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032868,GO:0032869,GO:0032870,GO:0033993,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035690,GO:0036211,GO:0042221,GO:0042493,GO:0042594,GO:0042737,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043412,GO:0043434,GO:0043436,GO:0043687,GO:0043900,GO:0043903,GO:0043949,GO:0043950,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044267,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045471,GO:0046031,GO:0046034,GO:0046164,GO:0046174,GO:0046364,GO:0046365,GO:0046394,GO:0046395,GO:0046434,GO:0046459,GO:0046483,GO:0046496,GO:0046677,GO:0046683,GO:0046700,GO:0046872,GO:0046914,GO:0047134,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048545,GO:0048562,GO:0048568,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048646,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051186,GO:0051384,GO:0051591,GO:0051704,GO:0051716,GO:0055086,GO:0055114,GO:0060429,GO:0061005,GO:0061008,GO:0062012,GO:0065007,GO:0070013,GO:0070365,GO:0070887,GO:0071236,GO:0071310,GO:0071361,GO:0071375,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071466,GO:0071495,GO:0071548,GO:0071549,GO:0071704,GO:0071840,GO:0072001,GO:0072071,GO:0072329,GO:0072330,GO:0072521,GO:0072524,GO:0080090,GO:0097159,GO:0097237,GO:0097305,GO:0097306,GO:0097327,GO:1901135,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1901617,GO:1901652,GO:1901653,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902531,GO:1902533 4.1.1.32 0.0000000002805 62.0
SYD1_k127_380099_17 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00005647 50.0
SYD1_k127_380099_2 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 571.0
SYD1_k127_380099_3 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 468.0
SYD1_k127_380099_4 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004066 462.0
SYD1_k127_380099_5 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 349.0
SYD1_k127_380099_6 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008715 328.0
SYD1_k127_380099_7 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 325.0
SYD1_k127_380099_8 PhoD-like phosphatase, N-terminal domain K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000007386 232.0
SYD1_k127_380099_9 Protein of unknown function (DUF4197) - - - 0.000000000000000000000000000000000000000000000000009251 188.0
SYD1_k127_3821473_0 Lactonase, 7-bladed beta-propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006973 305.0
SYD1_k127_3821473_1 extracellular solute-binding protein, family 3 - - - 0.000000000005028 68.0
SYD1_k127_3851224_0 aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 432.0
SYD1_k127_3851224_1 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000445 252.0
SYD1_k127_387081_0 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002521 249.0
SYD1_k127_387081_1 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016866,GO:0017076,GO:0017111,GO:0019001,GO:0019637,GO:0019693,GO:0019842,GO:0031419,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034784,GO:0035383,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043603,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046872,GO:0046906,GO:0047727,GO:0048037,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564 5.4.99.13 0.000000000000000000000000000000000000000000000000000000000006233 211.0
SYD1_k127_3875160_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006734 588.0
SYD1_k127_3875160_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000001305 228.0
SYD1_k127_3875160_2 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.000000006571 56.0
SYD1_k127_3876458_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000273 360.0
SYD1_k127_3876458_1 Thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000007517 181.0
SYD1_k127_3876458_2 - - - - 0.000000000004151 68.0
SYD1_k127_3877945_0 protein conserved in bacteria K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002919 286.0
SYD1_k127_3882716_0 Fusaric acid resistance protein - - - 1.85e-198 638.0
SYD1_k127_3882716_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005763 305.0
SYD1_k127_3882716_2 Protein of unknown function (DUF1656) - - - 0.000000000000000006769 85.0
SYD1_k127_3882716_3 Transcriptional regulator K06075 - - 0.0000000005776 61.0
SYD1_k127_3896222_0 COG0474 Cation transport ATPase K01531 - 3.6.3.2 0.0 1074.0
SYD1_k127_3906733_0 Cytochrome c3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004228 336.0
SYD1_k127_3906733_1 - - - - 0.000000000000000009393 89.0
SYD1_k127_3907039_0 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000003159 228.0
SYD1_k127_3907039_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08234 - - 0.00000000000000000000000000000000000000000000000000000000000002025 217.0
SYD1_k127_3907039_2 - - - - 0.00000000000000000000000000000000000000000000000000001341 190.0
SYD1_k127_3927127_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 473.0
SYD1_k127_3927127_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009607 443.0
SYD1_k127_3927127_10 SurA N-terminal domain K03769,K07533 - 5.2.1.8 0.00002971 55.0
SYD1_k127_3927127_2 TIGRFAM general secretory pathway protein E K02454,K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009981 352.0
SYD1_k127_3927127_3 Bacterial type II and III secretion system protein K02453,K12282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000446 298.0
SYD1_k127_3927127_4 LrgB-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001039 278.0
SYD1_k127_3927127_5 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059,K07124 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000004412 222.0
SYD1_k127_3927127_6 Type II secretion system (T2SS), protein F - - - 0.000000000000000000000000000000000000000000000000005696 196.0
SYD1_k127_3927127_7 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000000002535 152.0
SYD1_k127_3927127_8 - - - - 0.0000000000000000000000000000001467 134.0
SYD1_k127_3927127_9 PFAM LrgA family protein K06518 - - 0.000000000000000000002493 99.0
SYD1_k127_3952967_0 Belongs to the amidase family K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000003908 243.0
SYD1_k127_3952967_1 Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02402 - - 0.0000000000000000000000000000000000000000000000000000000000000003137 228.0
SYD1_k127_3952967_2 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000001384 190.0
SYD1_k127_3952967_3 Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02403 - - 0.0000000000000000000000001035 114.0
SYD1_k127_3952967_4 - - - - 0.00000000000396 74.0
SYD1_k127_3958769_0 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002552 283.0
SYD1_k127_3958769_1 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor - - - 0.0000000000000000000000000003443 132.0
SYD1_k127_3958769_2 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.0000000000000000000002997 101.0
SYD1_k127_3966987_0 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 385.0
SYD1_k127_3992807_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 567.0
SYD1_k127_3992807_1 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.000000000000000000000000000000000000000000000000000000008789 201.0
SYD1_k127_3992807_2 PFAM phosphoryl transfer system HPr K11189 - - 0.000000000000000000000000000000003206 130.0
SYD1_k127_3992807_3 PFAM PTS system fructose subfamily IIA component K02821 - 2.7.1.194 0.000000000000000000006406 99.0
SYD1_k127_3992807_4 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 0.0000004035 52.0
SYD1_k127_4012839_0 AcrB/AcrD/AcrF family K03296 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008086 287.0
SYD1_k127_4012839_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.0000000000007706 76.0
SYD1_k127_4015587_0 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 GO:0003674,GO:0003824,GO:0004416,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0016790,GO:0034641,GO:0043603,GO:0044237,GO:0051186,GO:0071704,GO:1901564 3.1.2.6 0.000000000000000000000000000000000000002258 150.0
SYD1_k127_4015587_1 LysM domain K08307 - - 0.000000000000000001897 92.0
SYD1_k127_4018477_0 cysteine dioxygenase type I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001138 248.0
SYD1_k127_4018477_1 sulfurtransferase - - - 0.0000000000000000000000000000000000000000000000000000000002837 207.0
SYD1_k127_4018477_2 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.000000007352 56.0
SYD1_k127_402182_0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006807 417.0
SYD1_k127_402182_1 NADPH quinone K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005488 408.0
SYD1_k127_402182_2 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 341.0
SYD1_k127_402182_3 of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000004457 246.0
SYD1_k127_402182_4 EthD domain - - - 0.0000000000000000000000000000000000000000000000001059 179.0
SYD1_k127_402182_5 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog - - - 0.00000000000002162 78.0
SYD1_k127_402182_6 Hemerythrin HHE cation binding domain - - - 0.0000000000001949 75.0
SYD1_k127_405662_0 EcsC protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005375 295.0
SYD1_k127_405662_1 - - - - 0.00000000000659 67.0
SYD1_k127_4096399_0 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 0.0 1143.0
SYD1_k127_4096399_1 Putative Na+/H+ antiporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 585.0
SYD1_k127_4096399_2 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008796 473.0
SYD1_k127_4096399_3 TIGRFAM para-aminobenzoate synthase, subunit I K01665,K03342 - 2.6.1.85,4.1.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008494 407.0
SYD1_k127_4096399_4 Aminotransferase - - - 0.00000000002939 65.0
SYD1_k127_4101960_0 Methyl-accepting chemotaxis sensory transducer with Pas Pac sensor K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001186 250.0
SYD1_k127_4102612_0 Bacterial transcriptional activator domain - - - 0.00000000000000004648 94.0
SYD1_k127_4125204_0 Alkane 1-monooxygenase K00496 GO:0003674,GO:0003824,GO:0004497,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016491,GO:0016705,GO:0016713,GO:0018685,GO:0043446,GO:0043448,GO:0044237,GO:0044248,GO:0055114,GO:0071704,GO:1901575 1.14.15.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 424.0
SYD1_k127_4125204_1 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000001259 247.0
SYD1_k127_4153748_0 AcrB/AcrD/AcrF family K03296,K18138 - - 0.0 1424.0
SYD1_k127_4153748_1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 1.315e-271 842.0
SYD1_k127_4153748_2 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006752 475.0
SYD1_k127_4153748_3 Tat pathway signal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 469.0
SYD1_k127_4153748_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000259 279.0
SYD1_k127_4153748_5 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family K18139 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001154 281.0
SYD1_k127_4153748_6 dioxygenase of extradiol dioxygenase family K06991 - - 0.00000000000000000000000000000000000000000000000000000000002176 207.0
SYD1_k127_4153748_7 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000005778 211.0
SYD1_k127_4153748_8 Tetracycline transcriptional repressor MAATS-type K03577 - - 0.0000000000000000000000000000000000000000000000000000000006332 207.0
SYD1_k127_4155542_0 FAD linked oxidases, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 336.0
SYD1_k127_4155542_1 Belongs to the WrbA family K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001585 278.0
SYD1_k127_4155542_2 Predicted membrane protein (DUF2069) - - - 0.00000000000000000000000000384 115.0
SYD1_k127_428123_0 Enhances distal genes transcription elongation in a specialized subset of operons that encode extracytoplasmic components K05785 - - 0.0000000000000000000000000000008088 127.0
SYD1_k127_4288652_0 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003897 344.0
SYD1_k127_4288652_1 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 291.0
SYD1_k127_4288652_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000001428 250.0
SYD1_k127_4339787_0 helix_turn_helix, Lux Regulon K03556 - - 0.0000000000000000000000000000000000000000000000000000001155 207.0
SYD1_k127_4339787_1 LysR substrate binding domain - GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000006942 190.0
SYD1_k127_4342478_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1026.0
SYD1_k127_4342478_1 Catalyzes the reversible formation of glyoxylate and succinate from isocitrate K01637 - 4.1.3.1 9.216e-245 760.0
SYD1_k127_4342478_2 Predicted metal-dependent hydrolase K07044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 374.0
SYD1_k127_4342478_3 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000006355 249.0
SYD1_k127_4342478_4 Belongs to the MIP aquaporin (TC 1.A.8) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001961 244.0
SYD1_k127_4342478_5 Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions K02553 - - 0.000000000000000000000000000000000000000000000000000000000000000001736 230.0
SYD1_k127_4342478_6 CHASE3 domain K03406 - - 0.000000000000000000000000000000000000000000000000000000000000448 226.0
SYD1_k127_4342478_7 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.00000000000000000000000000000000000000000000000000000004192 209.0
SYD1_k127_4342478_8 Transcriptional regulator K03892 - - 0.00000000000000000000000000000000834 130.0
SYD1_k127_4342478_9 - - - - 0.0008813 49.0
SYD1_k127_4364604_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006999 538.0
SYD1_k127_4364604_1 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000001771 113.0
SYD1_k127_4373758_0 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000003531 244.0
SYD1_k127_4373758_1 Asp Glu Hydantoin racemase - - - 0.0000000000000000000000000000000001044 135.0
SYD1_k127_4386937_0 Phosphoesterase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 291.0
SYD1_k127_441264_0 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000002845 251.0
SYD1_k127_441264_1 PFAM regulatory protein TetR K22105 - - 0.00000000000000000000000000000000000000000000000000000000000000000000481 241.0
SYD1_k127_441264_2 UbiA prenyltransferase family - - - 0.0000000000000000000000000001119 122.0
SYD1_k127_441264_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000006857 101.0
SYD1_k127_441264_4 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K02479,K07692 - - 0.000000000000000001235 94.0
SYD1_k127_441918_0 glutamate--cysteine ligase K01919 - 6.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002926 276.0
SYD1_k127_441918_1 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000002235 233.0
SYD1_k127_4425631_0 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 394.0
SYD1_k127_4425631_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 320.0
SYD1_k127_4425631_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000001159 197.0
SYD1_k127_4425631_3 SecretomeP prediction - - - 0.0000000000000000000000000000000000003081 146.0
SYD1_k127_4425631_4 - - - - 0.00012 49.0
SYD1_k127_442938_0 NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 553.0
SYD1_k127_442938_1 Uncharacterized protein conserved in bacteria (DUF2309) K09822 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 506.0
SYD1_k127_442938_10 Phosphoglycolate phosphatase K22292 - 3.1.3.105 0.0000000000000000000000000000000000000000000000000000000003509 209.0
SYD1_k127_442938_11 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000000000000000000000001105 190.0
SYD1_k127_442938_12 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.00000000000004554 74.0
SYD1_k127_442938_13 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.000000002566 59.0
SYD1_k127_442938_2 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 459.0
SYD1_k127_442938_3 Short-chain dehydrogenase reductase sdr - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 378.0
SYD1_k127_442938_4 Bacterial regulatory helix-turn-helix protein, lysR family K03717 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009863 374.0
SYD1_k127_442938_5 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000603 351.0
SYD1_k127_442938_6 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007417 349.0
SYD1_k127_442938_7 Proton-conducting membrane transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004733 308.0
SYD1_k127_442938_8 Chemotaxis signal transduction protein K03415 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007835 264.0
SYD1_k127_442938_9 2OG-Fe(II) oxygenase K07394 - - 0.0000000000000000000000000000000000000000000000000000000000000005301 227.0
SYD1_k127_4546907_0 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004329 550.0
SYD1_k127_4546907_1 Uncharacterised MFS-type transporter YbfB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004049 372.0
SYD1_k127_4546907_2 flavoprotein involved in K transport - - - 0.00000000000000000000000000000000000000000000000000000000000000001272 236.0
SYD1_k127_4546907_3 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030955,GO:0031004,GO:0031224,GO:0031226,GO:0031420,GO:0032991,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090533,GO:0090662,GO:0098533,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.12 0.00000000000000000000000000000000000000000000007796 172.0
SYD1_k127_4546907_4 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000001205 160.0
SYD1_k127_4581640_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07239,K15726 - - 8.946e-238 751.0
SYD1_k127_4592952_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1261.0
SYD1_k127_4592952_1 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 344.0
SYD1_k127_4592952_2 Transcriptional regulator, LysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000009973 224.0
SYD1_k127_4599356_0 Heat shock 70 kDa protein K04043 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 0.0 1053.0
SYD1_k127_4599356_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 6.558e-308 956.0
SYD1_k127_4599356_10 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 412.0
SYD1_k127_4599356_11 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007359 414.0
SYD1_k127_4599356_12 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007867 376.0
SYD1_k127_4599356_13 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 356.0
SYD1_k127_4599356_14 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 351.0
SYD1_k127_4599356_15 abc transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 352.0
SYD1_k127_4599356_16 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006182 349.0
SYD1_k127_4599356_17 ABC-type branched-chain amino acid transport systems, ATPase component K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007171 307.0
SYD1_k127_4599356_18 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000002922 269.0
SYD1_k127_4599356_19 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000000000000000000000001188 229.0
SYD1_k127_4599356_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000991 610.0
SYD1_k127_4599356_20 NAD dependent epimerase/dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000000003096 228.0
SYD1_k127_4599356_21 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000000000000000000000000000006836 196.0
SYD1_k127_4599356_22 LUD domain K00782 - - 0.0000000000000000000000000000000000000000000000000000001017 202.0
SYD1_k127_4599356_23 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000000000004706 170.0
SYD1_k127_4599356_24 RNA polymerase sigma factor K03088 - - 0.000000000000000000000000000000000000007102 153.0
SYD1_k127_4599356_25 PFAM Cytochrome c, class I K08738 - - 0.0000000000000000000000000000000008632 132.0
SYD1_k127_4599356_26 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.00000000000000000000000001546 115.0
SYD1_k127_4599356_27 TIGRFAM TonB family protein K03832 - - 0.00000000000000000007605 98.0
SYD1_k127_4599356_28 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000000004702 90.0
SYD1_k127_4599356_29 Oxidoreductase FAD-binding domain K00528 - 1.18.1.2,1.19.1.1 0.000000000000000001035 88.0
SYD1_k127_4599356_3 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 501.0
SYD1_k127_4599356_30 polyhydroxyalkanoic acid system protein - - - 0.0000000000000006895 81.0
SYD1_k127_4599356_31 Protein of unknown function (DUF3460) - - - 0.000000000000057 74.0
SYD1_k127_4599356_33 response regulator K14979 - - 0.000000000385 69.0
SYD1_k127_4599356_34 Anti-sigma-K factor rskA - - - 0.0000002657 57.0
SYD1_k127_4599356_35 - - - - 0.000002731 53.0
SYD1_k127_4599356_4 oxidoreductase FAD NAD(P)-binding domain protein K00523,K18248 - 1.17.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 490.0
SYD1_k127_4599356_5 PFAM ABC transporter related K12541 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 490.0
SYD1_k127_4599356_6 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006456 467.0
SYD1_k127_4599356_7 ABC-type branched-chain amino acid transport system, periplasmic component K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007862 460.0
SYD1_k127_4599356_8 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 435.0
SYD1_k127_4599356_9 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 425.0
SYD1_k127_4601921_0 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004777 564.0
SYD1_k127_4616030_0 protein pa0830 SWALL Q9I5A9 (EMBL AE004517) (277 aa) fasta scores E() K07044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006944 323.0
SYD1_k127_4616030_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000004219 211.0
SYD1_k127_4616030_2 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000306 130.0
SYD1_k127_4616030_3 nuclease - - - 0.000000000000000005249 85.0
SYD1_k127_4616376_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00394 - 1.8.99.2 1.408e-306 948.0
SYD1_k127_4616376_1 cell division protein K03466 - - 9.551e-291 913.0
SYD1_k127_4616376_10 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000715 335.0
SYD1_k127_4616376_11 PBS lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008748 317.0
SYD1_k127_4616376_12 GntR family transcriptional regulator K03486,K03710 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008631 297.0
SYD1_k127_4616376_13 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 291.0
SYD1_k127_4616376_14 Protein of unknown function (DUF1275) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 289.0
SYD1_k127_4616376_15 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000675 260.0
SYD1_k127_4616376_16 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000006343 245.0
SYD1_k127_4616376_17 Small MutS-related domain - - - 0.000000000000000000000000000000000000000000000000000000000007707 217.0
SYD1_k127_4616376_18 Belongs to the P(II) protein family K04751,K04752 - - 0.000000000000000000000000000000000000000000000000000002948 192.0
SYD1_k127_4616376_19 Belongs to the UPF0324 family - - - 0.000000000000000000000000000000000000000000000000002835 195.0
SYD1_k127_4616376_2 PFAM AAA ATPase central domain protein K07478 - - 1.72e-243 757.0
SYD1_k127_4616376_20 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000000000000000000002109 173.0
SYD1_k127_4616376_21 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000000000000000000000000000000003722 171.0
SYD1_k127_4616376_22 4fe-4S ferredoxin - - - 0.000000000000000000000000000000000009951 137.0
SYD1_k127_4616376_23 HemX, putative uroporphyrinogen-III C-methyltransferase K02496,K13543 - 2.1.1.107,4.2.1.75 0.000000000000000000000000000000004924 137.0
SYD1_k127_4616376_24 Protein of unknown function (DUF971) - - - 0.0000000000000001126 83.0
SYD1_k127_4616376_25 enzyme of heme biosynthesis K02498 - - 0.000000000000007102 87.0
SYD1_k127_4616376_3 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 2.288e-202 637.0
SYD1_k127_4616376_4 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 5.311e-202 642.0
SYD1_k127_4616376_5 NMT1-like family K15553 - - 2.841e-194 616.0
SYD1_k127_4616376_6 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757 529.0
SYD1_k127_4616376_7 ferredoxin--nadp reductase K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 415.0
SYD1_k127_4616376_8 ATPases associated with a variety of cellular activities K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 385.0
SYD1_k127_4616376_9 protein conserved in bacteria K09919 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004803 362.0
SYD1_k127_4617450_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 2.287e-226 709.0
SYD1_k127_4617450_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0000226,GO:0001817,GO:0001819,GO:0001906,GO:0001907,GO:0002376,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0004365,GO:0004857,GO:0004866,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005811,GO:0005829,GO:0005856,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006417,GO:0006464,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007010,GO:0007017,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009435,GO:0009605,GO:0009607,GO:0009620,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009987,GO:0010033,GO:0010466,GO:0010468,GO:0010506,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010941,GO:0010942,GO:0010951,GO:0012501,GO:0012505,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016241,GO:0016310,GO:0016491,GO:0016620,GO:0016740,GO:0016769,GO:0016903,GO:0017014,GO:0017144,GO:0017148,GO:0018119,GO:0018130,GO:0018193,GO:0018198,GO:0019222,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019730,GO:0019752,GO:0019828,GO:0019904,GO:0030162,GO:0030234,GO:0030414,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031341,GO:0031343,GO:0031640,GO:0031647,GO:0031965,GO:0031967,GO:0031975,GO:0032268,GO:0032269,GO:0032787,GO:0032879,GO:0032880,GO:0032991,GO:0034097,GO:0034248,GO:0034249,GO:0034341,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035605,GO:0035606,GO:0035821,GO:0036094,GO:0036211,GO:0042221,GO:0042802,GO:0042866,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043436,GO:0043891,GO:0043900,GO:0043902,GO:0043903,GO:0044003,GO:0044004,GO:0044068,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044364,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044531,GO:0044532,GO:0044533,GO:0045087,GO:0045861,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050662,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050832,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051287,GO:0051336,GO:0051346,GO:0051402,GO:0051701,GO:0051702,GO:0051704,GO:0051707,GO:0051709,GO:0051712,GO:0051716,GO:0051817,GO:0051818,GO:0051851,GO:0051852,GO:0051873,GO:0051883,GO:0052040,GO:0052042,GO:0052248,GO:0052330,GO:0052433,GO:0052501,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060255,GO:0061134,GO:0061135,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0061844,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070887,GO:0070997,GO:0071310,GO:0071345,GO:0071346,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090087,GO:0090407,GO:0097159,GO:0097452,GO:0097718,GO:0098542,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903530,GO:1903532,GO:1904951,GO:1990904,GO:2000112,GO:2000113 1.2.1.12 4.969e-209 651.0
SYD1_k127_4617450_10 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 447.0
SYD1_k127_4617450_11 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008615 435.0
SYD1_k127_4617450_12 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005447 417.0
SYD1_k127_4617450_13 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 407.0
SYD1_k127_4617450_14 NADPH-dependent FMN reductase K11811 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 381.0
SYD1_k127_4617450_15 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 380.0
SYD1_k127_4617450_16 CBS domain containing protein K06189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002674 370.0
SYD1_k127_4617450_17 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 352.0
SYD1_k127_4617450_18 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005012 341.0
SYD1_k127_4617450_19 Subtilase family K14645 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005425 339.0
SYD1_k127_4617450_2 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 2.268e-208 650.0
SYD1_k127_4617450_20 Deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 297.0
SYD1_k127_4617450_21 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001525 272.0
SYD1_k127_4617450_22 TIGRFAM HAD-superfamily subfamily IB hydrolase, TIGR01490 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002222 273.0
SYD1_k127_4617450_23 Belongs to the transketolase family K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000001579 255.0
SYD1_k127_4617450_24 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000006634 249.0
SYD1_k127_4617450_25 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000007409 247.0
SYD1_k127_4617450_26 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.0000000000000000000000000000000000000000000000000000000000000000003108 235.0
SYD1_k127_4617450_27 regulator of disulfide bond formation K07397 - - 0.0000000000000000000000000000000000000000000000000000000000000001047 225.0
SYD1_k127_4617450_28 Required for insertion of 4Fe-4S clusters K15724 - - 0.000000000000000000000000000000000000000000000000000000000000004717 218.0
SYD1_k127_4617450_29 Membrane transport protein K07088 - - 0.00000000000000000000000000000000000000000000000000000000000002727 224.0
SYD1_k127_4617450_3 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 7.01e-205 648.0
SYD1_k127_4617450_30 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000000000000007273 214.0
SYD1_k127_4617450_31 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000000000001165 172.0
SYD1_k127_4617450_32 atpase or kinase K06925 - - 0.000000000000000000000000000000000000000000006392 167.0
SYD1_k127_4617450_33 TIGRFAM DnaA regulatory inactivator Hda K10763 - - 0.00000000000000000000000000000000000000009727 160.0
SYD1_k127_4617450_34 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.000000000000000000000000000000000001189 143.0
SYD1_k127_4617450_35 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000000000000000000000000000002562 138.0
SYD1_k127_4617450_36 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000127 113.0
SYD1_k127_4617450_37 - - - - 0.00000000000000000002609 100.0
SYD1_k127_4617450_38 - - - - 0.00000000003685 76.0
SYD1_k127_4617450_39 Rhomboid family - - - 0.000006674 55.0
SYD1_k127_4617450_4 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004341 579.0
SYD1_k127_4617450_5 Belongs to the phosphoglycerate kinase family K00927 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 556.0
SYD1_k127_4617450_6 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004569 526.0
SYD1_k127_4617450_7 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005458 515.0
SYD1_k127_4617450_8 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002955 496.0
SYD1_k127_4617450_9 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005387 472.0
SYD1_k127_4623749_0 Protein involved in meta-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 304.0
SYD1_k127_4623749_1 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000003238 162.0
SYD1_k127_4627449_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 GO:0000287,GO:0003674,GO:0003824,GO:0004738,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0019842,GO:0030976,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0055114,GO:0097159,GO:1901363,GO:1901681 1.2.4.1 0.0 1529.0
SYD1_k127_4627449_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1015.0
SYD1_k127_4627449_10 PFAM metallophosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 411.0
SYD1_k127_4627449_11 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 399.0
SYD1_k127_4627449_12 PFAM ATP-binding region, ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005124 356.0
SYD1_k127_4627449_13 Lipocalin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 304.0
SYD1_k127_4627449_14 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001616 270.0
SYD1_k127_4627449_15 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001099 269.0
SYD1_k127_4627449_16 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008487 260.0
SYD1_k127_4627449_17 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000000000000000000000001436 198.0
SYD1_k127_4627449_18 ABC transporter, ATP-binding protein K02003 - - 0.00000000000000000000000000000000000000000000000001371 187.0
SYD1_k127_4627449_19 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.00000000000000000000000000000000000000000006687 161.0
SYD1_k127_4627449_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 5.574e-276 859.0
SYD1_k127_4627449_20 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000000000000001055 160.0
SYD1_k127_4627449_21 PFAM regulatory protein, MerR - - - 0.000000000000000000000000000000000000000002082 159.0
SYD1_k127_4627449_22 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.000000000000000000000000000000000000000008406 160.0
SYD1_k127_4627449_23 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000009484 114.0
SYD1_k127_4627449_24 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000000000000403 104.0
SYD1_k127_4627449_25 - - - - 0.0000000005531 64.0
SYD1_k127_4627449_26 - - - - 0.0000001922 56.0
SYD1_k127_4627449_27 dehydrogenase - - - 0.00001434 48.0
SYD1_k127_4627449_3 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 6.498e-265 839.0
SYD1_k127_4627449_4 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00382,K00627 - 1.8.1.4,2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003381 591.0
SYD1_k127_4627449_5 ABC transporter transmembrane region K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 545.0
SYD1_k127_4627449_6 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 528.0
SYD1_k127_4627449_7 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007238 488.0
SYD1_k127_4627449_8 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003445 474.0
SYD1_k127_4627449_9 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006769 415.0
SYD1_k127_4639167_0 Aminotransferase K01845 - 5.4.3.8 1.713e-204 643.0
SYD1_k127_4639167_1 PFAM DNA photolyase, FAD-binding K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003013 610.0
SYD1_k127_4639167_10 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000000000000008088 138.0
SYD1_k127_4639167_11 Rubredoxin - - - 0.000000000000000000000000000006981 118.0
SYD1_k127_4639167_2 Amidohydrolase family K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005816 572.0
SYD1_k127_4639167_3 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 512.0
SYD1_k127_4639167_4 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000000000000000000000000000000000000000003826 224.0
SYD1_k127_4639167_5 Phosphomethylpyrimidine kinase K00941,K14153 - 2.5.1.3,2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000007151 221.0
SYD1_k127_4639167_6 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000003758 183.0
SYD1_k127_4639167_7 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000005176 175.0
SYD1_k127_4639167_8 - - - - 0.000000000000000000000000000000000000395 147.0
SYD1_k127_4639167_9 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000001111 144.0
SYD1_k127_4649314_0 Domain of unknown function (DUF4915) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001228 258.0
SYD1_k127_4649314_1 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.00000000000000000000000000000000002427 139.0
SYD1_k127_4649314_2 Collagen triple helix repeat (20 copies) - - - 0.000000000000000000000000000001003 139.0
SYD1_k127_4649389_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0 1628.0
SYD1_k127_4649389_1 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005249 496.0
SYD1_k127_4649389_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 468.0
SYD1_k127_4649389_3 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 341.0
SYD1_k127_4649389_4 COG0437 Fe-S-cluster-containing hydrogenase components 1 K00124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005773 275.0
SYD1_k127_4649389_5 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000001556 194.0
SYD1_k127_4649389_6 Nitrate reductase delta subunit - - - 0.000000000000000000000000000000000000000000000009528 178.0
SYD1_k127_4649389_7 Protein of unknown function (DUF3305) - - - 0.0000000000000000000000006002 109.0
SYD1_k127_4649389_8 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.00000000000000004404 83.0
SYD1_k127_4652592_0 Malonate decarboxylase K13929 - 2.3.1.187 1.859e-219 684.0
SYD1_k127_4652592_1 beta subunit K13932 - 4.1.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004658 341.0
SYD1_k127_4652592_2 Malonate decarboxylase gamma subunit (MdcE) K13933 - 4.1.1.87 0.00000000000000000000000000000000000000000000000000000000000004573 222.0
SYD1_k127_4652592_3 Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase K13930 - 2.4.2.52 0.0000000000000000000000000000000000000000000000000000001512 203.0
SYD1_k127_4652592_4 Malonate decarboxylase delta subunit (MdcD) K13931 - - 0.00000000000000000000000308 106.0
SYD1_k127_4652592_5 Phosphoribosyl-dephospho-CoA transferase MdcG K13934 - 2.7.7.66 0.00000000000000004785 91.0
SYD1_k127_4656277_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 2.731e-306 943.0
SYD1_k127_4656277_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003643 527.0
SYD1_k127_4656277_10 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.000000000000000000000000000000000000000000001869 177.0
SYD1_k127_4656277_11 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000000000000000000836 139.0
SYD1_k127_4656277_12 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000003446 125.0
SYD1_k127_4656277_13 Integral membrane protein (DUF2244) - - - 0.000000000000000000000000022 114.0
SYD1_k127_4656277_14 Competence protein - GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000000000000009725 114.0
SYD1_k127_4656277_15 Protein of unknown function (DUF2970) - - - 0.0000000000000000005242 89.0
SYD1_k127_4656277_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 512.0
SYD1_k127_4656277_3 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007024 410.0
SYD1_k127_4656277_4 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 363.0
SYD1_k127_4656277_5 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.000000000000000000000000000000000000000000000000000000000000000000006849 241.0
SYD1_k127_4656277_6 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000006327 222.0
SYD1_k127_4656277_7 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000001076 234.0
SYD1_k127_4656277_8 Cytochrome C oxidase assembly protein ctag K02258 - - 0.0000000000000000000000000000000000000000000000000000000000006757 215.0
SYD1_k127_4656277_9 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.000000000000000000000000000000000000000000000000000000000003968 211.0
SYD1_k127_4657413_0 response regulator K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006127 298.0
SYD1_k127_4657413_1 cellulose synthase K20541 - - 0.000000000000000000117 96.0
SYD1_k127_4657413_2 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000008497 64.0
SYD1_k127_4683131_0 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 515.0
SYD1_k127_4683131_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006039 312.0
SYD1_k127_4683131_2 long-chain fatty acid transport protein K06076 GO:0003674,GO:0005215,GO:0005319,GO:0005324,GO:0005342,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0008028,GO:0008150,GO:0008509,GO:0008514,GO:0009279,GO:0010876,GO:0015075,GO:0015245,GO:0015267,GO:0015288,GO:0015318,GO:0015483,GO:0015711,GO:0015718,GO:0015849,GO:0015908,GO:0015909,GO:0016020,GO:0019867,GO:0022803,GO:0022829,GO:0022834,GO:0022836,GO:0022857,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0034220,GO:0044462,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098656,GO:1903825,GO:1905039 - 0.0000007293 59.0
SYD1_k127_4689240_0 Belongs to the heme-copper respiratory oxidase family K02298 - 1.10.3.10 0.0 1184.0
SYD1_k127_4689240_1 Sugar (and other) transporter - - - 1.115e-206 652.0
SYD1_k127_4689240_10 enoyl-CoA hydratase - - - 0.000000000000000000000000000000000008709 139.0
SYD1_k127_4689240_11 Transcriptional regulator K02508,K07506,K07720 - - 0.00000000000000000000000000000005742 136.0
SYD1_k127_4689240_2 Ubiquinol oxidase subunit 2 K02297 - 1.10.3.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006215 468.0
SYD1_k127_4689240_3 Cytochrome c oxidase subunit III K02276,K02299 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 346.0
SYD1_k127_4689240_4 Thioesterase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 319.0
SYD1_k127_4689240_5 PFAM Surfeit locus 1 family protein K14998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006556 281.0
SYD1_k127_4689240_6 NADPH-dependent FMN reductase K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000002002 243.0
SYD1_k127_4689240_7 TspO/MBR family K05770 - - 0.00000000000000000000000000000000000000000000000009552 182.0
SYD1_k127_4689240_8 Prokaryotic Cytochrome C oxidase subunit IV K02300 - - 0.00000000000000000000000000000000000000000000005892 173.0
SYD1_k127_4689240_9 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000001326 178.0
SYD1_k127_4689303_0 Lipase (class 3) - - - 0.00000000000000000000000000000000000000002499 166.0
SYD1_k127_4689303_1 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 GO:0000271,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005975,GO:0005976,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0033692,GO:0034637,GO:0034645,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0046377,GO:0071704,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 3.1.3.48 0.0000000003779 60.0
SYD1_k127_4689303_2 - - - - 0.00000001822 63.0
SYD1_k127_4693861_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta K13778 - 6.4.1.5 1.086e-222 702.0
SYD1_k127_4693861_1 acyl-CoA dehydrogenase K11731 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003158 591.0
SYD1_k127_4693861_2 Biotin carboxylase C-terminal domain K13777 - 6.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 562.0
SYD1_k127_4693861_3 PFAM Acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005676 449.0
SYD1_k127_4693861_4 KR domain K13774 - - 0.000000000000000000000000000000000000000000000000000005546 194.0
SYD1_k127_4693861_5 - - - - 0.000003069 60.0
SYD1_k127_4699605_0 Tripartite ATP-independent periplasmic transporter, DctM component K11690 - - 1.905e-216 676.0
SYD1_k127_4699605_1 Tripartite ATP-independent periplasmic transporters, DctQ component K11689 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 320.0
SYD1_k127_4699605_2 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.0000000000000000000000000000004202 124.0
SYD1_k127_4715047_0 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002322 269.0
SYD1_k127_4715047_1 Biotin-lipoyl like - - - 0.000000000000000000000000000009659 125.0
SYD1_k127_4722063_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1349.0
SYD1_k127_4722063_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1090.0
SYD1_k127_4722063_10 UbiA prenyltransferase family K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008969 350.0
SYD1_k127_4722063_11 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 332.0
SYD1_k127_4722063_12 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 330.0
SYD1_k127_4722063_13 Belongs to the methyltransferase superfamily K07444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008348 314.0
SYD1_k127_4722063_14 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000003551 268.0
SYD1_k127_4722063_15 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002444 259.0
SYD1_k127_4722063_16 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000003976 242.0
SYD1_k127_4722063_17 TIGRFAM rfaE bifunctional protein K03272,K21344 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000009791 241.0
SYD1_k127_4722063_18 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000002532 222.0
SYD1_k127_4722063_19 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000000000000000000000002884 209.0
SYD1_k127_4722063_2 DNA helicase K03657 - 3.6.4.12 1.568e-290 909.0
SYD1_k127_4722063_20 PFAM conserved K08973 - - 0.0000000000000000000000000000000000000000000000000000000005371 204.0
SYD1_k127_4722063_21 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000005943 203.0
SYD1_k127_4722063_22 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000001519 166.0
SYD1_k127_4722063_23 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000005059 161.0
SYD1_k127_4722063_24 endoribonuclease K09022 - 3.5.99.10 0.0000000000000000000000000000000000000001055 163.0
SYD1_k127_4722063_25 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.00000000000000000000000000000000001044 137.0
SYD1_k127_4722063_26 - - - - 0.00000000000000000000000003088 119.0
SYD1_k127_4722063_27 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.00000000000000003541 87.0
SYD1_k127_4722063_28 TM2 domain - - - 0.00000284 54.0
SYD1_k127_4722063_3 Isocitrate/isopropylmalate dehydrogenase K07246 - 1.1.1.83,1.1.1.93,4.1.1.73 3.279e-206 646.0
SYD1_k127_4722063_4 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 593.0
SYD1_k127_4722063_5 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 591.0
SYD1_k127_4722063_6 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 450.0
SYD1_k127_4722063_7 PFAM type II secretion system protein E K02669 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004729 443.0
SYD1_k127_4722063_8 Transcriptional regulator K04761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 436.0
SYD1_k127_4722063_9 LysR substrate binding domain K16135 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 360.0
SYD1_k127_4732048_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 2.316e-265 822.0
SYD1_k127_4732048_1 Domain of unknown function (DUF3458_C) ARM repeats K01256 - 3.4.11.2 1.795e-264 835.0
SYD1_k127_4732048_10 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 301.0
SYD1_k127_4732048_11 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.0000000000000000000000000000000000000000000000000000000000000000000000000005889 264.0
SYD1_k127_4732048_12 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000136 237.0
SYD1_k127_4732048_13 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000000000411 222.0
SYD1_k127_4732048_14 Hemolysin K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000006223 213.0
SYD1_k127_4732048_15 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000001242 97.0
SYD1_k127_4732048_16 Protein of unknown function, DUF484 K09921 - - 0.00000000000000006208 89.0
SYD1_k127_4732048_17 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.00005581 52.0
SYD1_k127_4732048_2 Belongs to the argininosuccinate synthase family. Type K01940 - 6.3.4.5 3.588e-243 754.0
SYD1_k127_4732048_3 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 3.116e-215 674.0
SYD1_k127_4732048_4 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000461 503.0
SYD1_k127_4732048_5 acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008703 484.0
SYD1_k127_4732048_6 Methylenetetrahydrofolate reductase K00297 GO:0000166,GO:0003674,GO:0003824,GO:0004489,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0022607,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 379.0
SYD1_k127_4732048_7 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 398.0
SYD1_k127_4732048_8 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 306.0
SYD1_k127_4732048_9 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 300.0
SYD1_k127_4733244_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0 1125.0
SYD1_k127_4733244_1 glutaminyl-tRNA K01886 - 6.1.1.18 6.346e-268 838.0
SYD1_k127_4733244_10 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 391.0
SYD1_k127_4733244_11 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009019 369.0
SYD1_k127_4733244_12 transcriptional regulatory protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006659 361.0
SYD1_k127_4733244_13 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006813 344.0
SYD1_k127_4733244_14 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 332.0
SYD1_k127_4733244_15 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009327 302.0
SYD1_k127_4733244_16 GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 309.0
SYD1_k127_4733244_17 Curli production assembly/transport component CsgG K06214,K13586 - - 0.0000000000000000000000000000000000000000000000000000000000000000001561 246.0
SYD1_k127_4733244_18 Cobalamin adenosyltransferase K00798 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005525,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016043,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019003,GO:0019438,GO:0019538,GO:0022607,GO:0030091,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033013,GO:0033014,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000008942 217.0
SYD1_k127_4733244_19 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.00000000000000000000000000000000000000000000000000000262 197.0
SYD1_k127_4733244_2 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.574e-246 771.0
SYD1_k127_4733244_20 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000000000000000000007155 183.0
SYD1_k127_4733244_21 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000000001918 177.0
SYD1_k127_4733244_22 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000004927 168.0
SYD1_k127_4733244_23 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0040007,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.0000000000000000000000000000000717 133.0
SYD1_k127_4733244_24 ThiS family K03154 - - 0.0000000000000007195 81.0
SYD1_k127_4733244_3 Ribonuclease E/G family K08301 - - 1.033e-220 693.0
SYD1_k127_4733244_4 Oxidative deamination of D-amino acids K00285 - 1.4.5.1 1.065e-206 649.0
SYD1_k127_4733244_5 Belongs to the GARS family K01945 - 6.3.4.13 1.202e-200 632.0
SYD1_k127_4733244_6 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004366 538.0
SYD1_k127_4733244_7 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 490.0
SYD1_k127_4733244_8 Site-specific recombinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006923 453.0
SYD1_k127_4733244_9 Protein of unknown function (DUF3641) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006221 413.0
SYD1_k127_4755354_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000006897 269.0
SYD1_k127_4755354_1 CoA-transferase family III - - - 0.000000000000000000000000000000000000002066 150.0
SYD1_k127_4759724_0 ABC transporter, transmembrane region K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005243 293.0
SYD1_k127_4759724_1 Domain of unknown function (DUF1854) - - - 0.0000000000000000000000000000000000002261 145.0
SYD1_k127_4761732_0 Histidine Phosphotransfer domain - - - 0.000000000000000000004778 96.0
SYD1_k127_4761732_1 helix_turn_helix, Lux Regulon - - - 0.000000000004283 75.0
SYD1_k127_4761732_2 Histidine kinase K02030 - - 0.0008789 47.0
SYD1_k127_4763280_0 PFAM aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 501.0
SYD1_k127_4763280_1 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000001609 162.0
SYD1_k127_4763280_2 Fatty acid desaturase K00507 - 1.14.19.1 0.000000008757 61.0
SYD1_k127_4768860_0 Transcriptional regulatory protein, C terminal K02483,K07666,K07774 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 367.0
SYD1_k127_4768860_1 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 336.0
SYD1_k127_4773699_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 2.408e-211 668.0
SYD1_k127_4773699_1 Peptidase M61 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 523.0
SYD1_k127_4773699_10 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000001724 239.0
SYD1_k127_4773699_11 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000002384 201.0
SYD1_k127_4773699_12 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000003362 199.0
SYD1_k127_4773699_13 protein affecting Mg2 Co2 transport K06195 - - 0.000000000000000000000000000000000000000000000122 171.0
SYD1_k127_4773699_14 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family - - - 0.0000000000000000000000000000000000000000000002533 176.0
SYD1_k127_4773699_15 Protein of unknown function (DUF3429) - - - 0.000000000000000006448 89.0
SYD1_k127_4773699_2 alcohol dehydrogenase K19745 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000952 436.0
SYD1_k127_4773699_3 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 413.0
SYD1_k127_4773699_4 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 386.0
SYD1_k127_4773699_5 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 355.0
SYD1_k127_4773699_6 Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and or cell division K08304 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006616 331.0
SYD1_k127_4773699_7 FAD binding domain of DNA photolyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 318.0
SYD1_k127_4773699_8 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 310.0
SYD1_k127_4773699_9 anthranilate K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005517 305.0
SYD1_k127_4774606_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006561 601.0
SYD1_k127_4774606_1 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000003521 154.0
SYD1_k127_4775426_0 repeat protein - - - 0.0 1239.0
SYD1_k127_4775426_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 3.048e-275 865.0
SYD1_k127_4775426_10 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000009331 214.0
SYD1_k127_4775426_11 Response regulator, receiver K03413 - - 0.000000000000000000000000000000000000000000000000000002184 192.0
SYD1_k127_4775426_13 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000002046 174.0
SYD1_k127_4775426_14 signal transduction histidine kinase K03407 - 2.7.13.3 0.00000000000000000000000001979 111.0
SYD1_k127_4775426_15 Family of unknown function (DUF5329) - - - 0.00000000000000000000002799 104.0
SYD1_k127_4775426_16 5-carboxymethyl-2-hydroxymuconate isomerase - - - 0.0000000000000001468 83.0
SYD1_k127_4775426_17 PGAP1-like protein - - - 0.00000000000007042 81.0
SYD1_k127_4775426_19 STAS domain - - - 0.00003613 50.0
SYD1_k127_4775426_2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K16872 - 2.3.1.207 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006085 547.0
SYD1_k127_4775426_20 - - - - 0.0009869 44.0
SYD1_k127_4775426_3 NADH:flavin oxidoreductase / NADH oxidase family K10680 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 416.0
SYD1_k127_4775426_4 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002975 383.0
SYD1_k127_4775426_5 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 357.0
SYD1_k127_4775426_6 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008435 346.0
SYD1_k127_4775426_7 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 327.0
SYD1_k127_4775426_8 Glutathione S-transferase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 301.0
SYD1_k127_4775426_9 Acts as a magnesium transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000001755 235.0
SYD1_k127_4782209_0 AAA domain K07133 - - 5.136e-259 803.0
SYD1_k127_4782209_1 COG3209 Rhs family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 291.0
SYD1_k127_4782209_2 Fic/DOC family N-terminal - - - 0.000000048 55.0
SYD1_k127_4787247_0 PFAM AMP-dependent synthetase and ligase K00666,K01897 - 6.2.1.3 2.206e-245 773.0
SYD1_k127_4787247_1 FAD binding domain K05712 - 1.14.13.127 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009246 508.0
SYD1_k127_4787247_10 Fatty acid K06076 - - 0.000000000000000000000000000000000001387 155.0
SYD1_k127_4787247_11 Bacterial inner membrane protein - - - 0.0001693 51.0
SYD1_k127_4787247_2 COG0346 Lactoylglutathione lyase and related lyases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009668 479.0
SYD1_k127_4787247_3 fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 416.0
SYD1_k127_4787247_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K01607 - 4.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007353 339.0
SYD1_k127_4787247_5 Diacylglycerol acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000009614 222.0
SYD1_k127_4787247_6 - - - - 0.000000000000000000000000000000000000000000001093 183.0
SYD1_k127_4787247_7 Methyl-accepting chemotaxis sensory transducer with Pas Pac sensor K03406 - - 0.000000000000000000000000000000000000000001736 165.0
SYD1_k127_4787247_8 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000003998 155.0
SYD1_k127_4787247_9 Protein of unknown function, DUF393 - - - 0.000000000000000000000000000000000000005568 149.0
SYD1_k127_4804735_0 AIR synthase related protein, N-terminal domain K01008 - 2.7.9.3 0.0 1015.0
SYD1_k127_4804735_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000244 269.0
SYD1_k127_4807026_0 2,4-dienoyl-coA reductase K00219 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0008670,GO:0009056,GO:0009062,GO:0009987,GO:0010181,GO:0016042,GO:0016054,GO:0016491,GO:0016627,GO:0016628,GO:0019395,GO:0019752,GO:0030258,GO:0032553,GO:0032787,GO:0033542,GO:0033543,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0071949,GO:0072329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901575 1.3.1.34 0.0 1037.0
SYD1_k127_4807026_1 N,N-dimethylaniline monooxygenase activity K07222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 563.0
SYD1_k127_4807026_10 PFAM Cold-shock protein, DNA-binding K03704 - - 0.00000000000000000000000001282 110.0
SYD1_k127_4807026_11 flavoprotein involved in K transport - - - 0.000000000000000000001718 101.0
SYD1_k127_4807026_12 Sel1-like repeats. K07126 - - 0.0000000000000003845 86.0
SYD1_k127_4807026_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 512.0
SYD1_k127_4807026_3 Carbon-nitrogen hydrolase K01502 - 3.5.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006051 488.0
SYD1_k127_4807026_4 helix_turn_helix gluconate operon transcriptional repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 413.0
SYD1_k127_4807026_5 AIR synthase related protein, C-terminal domain K07123 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 359.0
SYD1_k127_4807026_6 PFAM DsrE DsrF-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 291.0
SYD1_k127_4807026_7 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000001597 176.0
SYD1_k127_4807026_8 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000002286 147.0
SYD1_k127_4807026_9 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000000001573 138.0
SYD1_k127_4808707_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 9.892e-298 925.0
SYD1_k127_4808707_1 rieske 2fe-2s K00499 - 1.14.15.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 527.0
SYD1_k127_4808707_10 Protein of unknown function (DUF3579) - - - 0.0000000000000000000000000000000000000000009522 158.0
SYD1_k127_4808707_11 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000007801 144.0
SYD1_k127_4808707_12 PFAM MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000005104 125.0
SYD1_k127_4808707_13 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000000001796 104.0
SYD1_k127_4808707_14 Biopolymer K03559 - - 0.0000000000000000002476 93.0
SYD1_k127_4808707_15 Belongs to the UPF0434 family K09791 - - 0.0000000004463 62.0
SYD1_k127_4808707_16 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000587 60.0
SYD1_k127_4808707_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000849 522.0
SYD1_k127_4808707_3 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 377.0
SYD1_k127_4808707_4 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 323.0
SYD1_k127_4808707_5 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 301.0
SYD1_k127_4808707_6 divalent heavy-metal cations transporter K16267 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009332 259.0
SYD1_k127_4808707_7 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000169 255.0
SYD1_k127_4808707_8 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002055 229.0
SYD1_k127_4808707_9 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000005595 186.0
SYD1_k127_4812144_0 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.0000000000000000000000000000000000000000000000000000000000004184 223.0
SYD1_k127_4812144_1 flagellar protein FliS K02422 - - 0.000000000000000000006238 94.0
SYD1_k127_4818294_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K07788,K07789 - - 0.0 1254.0
SYD1_k127_4818294_1 domain protein K01421 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 475.0
SYD1_k127_4818294_2 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 439.0
SYD1_k127_4818294_3 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K07788 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004492 322.0
SYD1_k127_4818294_4 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000002991 246.0
SYD1_k127_4818294_5 chitinase - - - 0.000000000000000000000000000000000001369 144.0
SYD1_k127_4818294_7 Heavy-metal-associated domain K07213 - - 0.00000000000003169 75.0
SYD1_k127_4818294_8 transcriptional regulator, LuxR family - GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.000000000001371 76.0
SYD1_k127_4818294_9 Histidine kinase - - - 0.00007388 50.0
SYD1_k127_4837140_0 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006993 388.0
SYD1_k127_4837530_0 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006823 384.0
SYD1_k127_4837530_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 364.0
SYD1_k127_4837530_2 cytochrome - - - 0.000000000000000000000000000000000000000000000000000000000000000000001368 259.0
SYD1_k127_4837530_3 PFAM response regulator receiver K07667 - - 0.000000000000000000000000000000000000000000000000000000002 210.0
SYD1_k127_4837530_4 Glutathione peroxidase K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000004843 189.0
SYD1_k127_4837530_5 Osmosensitive K channel His kinase sensor K07646 - 2.7.13.3 0.0000000000000000000000000000000004584 145.0
SYD1_k127_4837530_6 Protein of unknown function (DUF2845) - - - 0.0000000003247 66.0
SYD1_k127_4839825_0 Large exoproteins involved in heme utilization or adhesion - - - 0.00000000000000000000000000000000002545 150.0
SYD1_k127_4860685_0 Penicillin-binding protein OB-like domain K05366 - 2.4.1.129,3.4.16.4 1.944e-266 844.0
SYD1_k127_4860685_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 2.814e-214 672.0
SYD1_k127_4860685_10 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 409.0
SYD1_k127_4860685_11 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 345.0
SYD1_k127_4860685_12 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 315.0
SYD1_k127_4860685_13 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 311.0
SYD1_k127_4860685_14 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 305.0
SYD1_k127_4860685_15 AAA domain, putative AbiEii toxin, Type IV TA system K09695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 304.0
SYD1_k127_4860685_16 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002277 259.0
SYD1_k127_4860685_17 PFAM cytochrome c, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008401 259.0
SYD1_k127_4860685_18 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001131 249.0
SYD1_k127_4860685_19 Transport permease protein K09694 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002008 255.0
SYD1_k127_4860685_2 ResB-like family K07399 - - 5.527e-207 666.0
SYD1_k127_4860685_20 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.0000000000000000000000000000000000000000000000000000000000000000002639 229.0
SYD1_k127_4860685_21 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000000000000000000005341 224.0
SYD1_k127_4860685_22 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000000000000000000000000000000002471 222.0
SYD1_k127_4860685_23 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000000000000000000000000000000000000000000000000000003447 222.0
SYD1_k127_4860685_24 Ribosomal protein L17 K02879 - - 0.0000000000000000000000000000000000000000000000000000000000009099 211.0
SYD1_k127_4860685_25 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000008514 220.0
SYD1_k127_4860685_26 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000000000000000000000000000000000003443 206.0
SYD1_k127_4860685_27 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000000000000000008109 202.0
SYD1_k127_4860685_28 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000000000000000000000000000242 194.0
SYD1_k127_4860685_29 Binds to the 23S rRNA K02876 - - 0.0000000000000000000000000000000000000000000000000000005099 196.0
SYD1_k127_4860685_3 cytochrome C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 578.0
SYD1_k127_4860685_30 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.00000000000000000000000000000000000000000000000002661 186.0
SYD1_k127_4860685_31 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000000000000000000002768 180.0
SYD1_k127_4860685_32 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.000000000000000000000000000000000000000000000002823 180.0
SYD1_k127_4860685_33 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.00000000000000000000000000000000000000000009626 160.0
SYD1_k127_4860685_34 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000000000000002682 146.0
SYD1_k127_4860685_35 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000000000000002247 146.0
SYD1_k127_4860685_36 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000003239 140.0
SYD1_k127_4860685_37 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000000000000000000000000000000306 130.0
SYD1_k127_4860685_38 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000000000000007164 120.0
SYD1_k127_4860685_39 Belongs to the frataxin family K06202 - - 0.0000000000000000000008271 99.0
SYD1_k127_4860685_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 554.0
SYD1_k127_4860685_40 L30 binds domain II of the 23S rRNA and the 5S rRNA K02907 - - 0.00000000000000000002984 92.0
SYD1_k127_4860685_41 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.000000000000000000278 89.0
SYD1_k127_4860685_42 translation elongation factor activity K02358 - - 0.000000000000004425 74.0
SYD1_k127_4860685_43 Ribosomal protein L36 K02919 - - 0.000000000001055 69.0
SYD1_k127_4860685_44 PFAM Fimbrial assembly family protein K02663 - - 0.0000105 55.0
SYD1_k127_4860685_45 Pilus assembly protein, PilO K02664 - - 0.000184 51.0
SYD1_k127_4860685_46 Type II and III secretion system protein K02507,K02666 - - 0.0003313 51.0
SYD1_k127_4860685_5 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 488.0
SYD1_k127_4860685_6 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 479.0
SYD1_k127_4860685_7 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008939 480.0
SYD1_k127_4860685_8 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 434.0
SYD1_k127_4860685_9 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 393.0
SYD1_k127_486581_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 5e-324 1006.0
SYD1_k127_486581_1 XdhC Rossmann domain K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000862 267.0
SYD1_k127_486581_2 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000005976 248.0
SYD1_k127_486581_3 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000004971 165.0
SYD1_k127_4869603_0 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 0.0 1461.0
SYD1_k127_4869603_1 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1316.0
SYD1_k127_4869603_10 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000005151 225.0
SYD1_k127_4869603_11 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor - - - 0.00000000000000000000000000000000000000000000000000000000001919 231.0
SYD1_k127_4869603_12 sigma factor antagonist activity K20977 - - 0.000000000000000000000000000000000000000000000000000000004907 210.0
SYD1_k127_4869603_2 AcnD-accessory protein PrpF K09788 - - 6.732e-217 677.0
SYD1_k127_4869603_3 Belongs to the amidase family K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003874 443.0
SYD1_k127_4869603_4 COG0642 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004557 429.0
SYD1_k127_4869603_5 Fatty acid hydroxylase superfamily K00227 - 1.14.19.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005224 357.0
SYD1_k127_4869603_6 Protein of unknown function (DUF2863) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006032 343.0
SYD1_k127_4869603_7 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008964,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044444,GO:0044464 4.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 343.0
SYD1_k127_4869603_8 Aconitase C-terminal domain K01681,K20455 GO:0003674,GO:0003824,GO:0003994,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009060,GO:0009062,GO:0009987,GO:0015980,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017001,GO:0017144,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019752,GO:0032787,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0045333,GO:0046395,GO:0046459,GO:0055114,GO:0071704,GO:0072329,GO:0072350,GO:1901575 4.2.1.117,4.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002204 266.0
SYD1_k127_4869603_9 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003051 250.0
SYD1_k127_4872146_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016866,GO:0017076,GO:0017111,GO:0019001,GO:0019637,GO:0019693,GO:0019842,GO:0031419,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034784,GO:0035383,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043603,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046872,GO:0046906,GO:0047727,GO:0048037,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564 5.4.99.13 0.0 1379.0
SYD1_k127_4872146_1 TIGRFAM type VI secretion protein IcmF K11891 - - 6.508e-196 657.0
SYD1_k127_4872146_10 Haemolysin secretion/activation protein ShlB/FhaC/HecB - GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000001352 248.0
SYD1_k127_4872146_11 TIGRFAM type IV VI secretion system protein, DotU family K11892 - - 0.0000000000000000000000000000000000000000000000000000000000000002373 237.0
SYD1_k127_4872146_12 ChrR Cupin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000002976 224.0
SYD1_k127_4872146_13 haemagglutination activity domain - - - 0.0000000000000000000000000000000000000000000000000004406 211.0
SYD1_k127_4872146_14 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000004924 181.0
SYD1_k127_4872146_15 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000006424 168.0
SYD1_k127_4872146_16 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.0000000000000000000000000000000000008903 149.0
SYD1_k127_4872146_17 Cupredoxin-like domain - - - 0.000000000000000000000000000000000005529 139.0
SYD1_k127_4872146_18 Type VI secretion system K07169,K11894,K11913 - - 0.000000000000000000000000000001897 134.0
SYD1_k127_4872146_19 Uncharacterized protein conserved in bacteria (DUF2094) K11890 - - 0.00000000000000069 88.0
SYD1_k127_4872146_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005171 574.0
SYD1_k127_4872146_20 PFAM OmpA MotB domain protein - - - 0.00000002596 62.0
SYD1_k127_4872146_3 Gp5 C-terminal repeat (3 copies) K11904 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004173 390.0
SYD1_k127_4872146_4 Serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 383.0
SYD1_k127_4872146_5 TIGRFAM type VI secretion protein, VC_A0114 family K11893 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 319.0
SYD1_k127_4872146_6 Psort location CytoplasmicMembrane, score K07243 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 289.0
SYD1_k127_4872146_7 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007339 276.0
SYD1_k127_4872146_8 VIT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002881 268.0
SYD1_k127_4872146_9 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000006211 251.0
SYD1_k127_4895928_0 SMART Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002882 278.0
SYD1_k127_4899836_0 DinB superfamily - - - 3.7e-322 992.0
SYD1_k127_4899836_1 2-hydroxychromene-2-carboxylate isomerase - - - 0.0000000000000000000000000000000000000000000000003259 183.0
SYD1_k127_4899836_2 PFAM DinB family - - - 0.00000000000000000000000000000000003916 140.0
SYD1_k127_4902037_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 508.0
SYD1_k127_4902037_1 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 282.0
SYD1_k127_4902037_2 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005818 272.0
SYD1_k127_4902037_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009598 257.0
SYD1_k127_4902037_4 Aminotransferase class-III K01845 - 5.4.3.8 0.000729 44.0
SYD1_k127_4905068_0 Tripartite ATP-independent periplasmic transporter, DctM component K11690 - - 1.058e-225 704.0
SYD1_k127_4905068_1 Bacterial extracellular solute-binding protein, family 7 K11688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009486 492.0
SYD1_k127_4905068_2 Tripartite ATP-independent periplasmic transporters, DctQ component K11689 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 321.0
SYD1_k127_4905068_3 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 0.00000000000000000000005259 103.0
SYD1_k127_4931077_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1087.0
SYD1_k127_4931077_1 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 574.0
SYD1_k127_4931077_2 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 GO:0000271,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005975,GO:0005976,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0033692,GO:0034637,GO:0034645,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0046377,GO:0071704,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 3.1.3.48 0.000000000000000000000000000000000000000000000000000000000000000000004716 237.0
SYD1_k127_4931077_3 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000000000000000000000000000000000005877 155.0
SYD1_k127_4931077_4 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.00000000000000000000000003384 111.0
SYD1_k127_4955601_0 XdhC Rossmann domain K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000003697 226.0
SYD1_k127_4955601_1 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.00000000000000000000000000000000000000008597 159.0
SYD1_k127_4976583_0 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 295.0
SYD1_k127_4976583_1 Putative Tad-like Flp pilus-assembly - - - 0.00000000000000000001305 106.0
SYD1_k127_505164_0 COG0725 ABC-type molybdate transport system, periplasmic component K02020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001121 276.0
SYD1_k127_505164_1 COG4149 ABC-type molybdate transport system, permease component K02018 - - 0.000000000000000000000000000000000000000000000000000005816 193.0
SYD1_k127_505164_2 PAP2 (Acid phosphatase) superfamily protein - - - 0.000000000000000000000000000009617 127.0
SYD1_k127_5051667_0 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000004011 205.0
SYD1_k127_505529_0 Belongs to the transketolase family K00615 - 2.2.1.1 1.888e-253 792.0
SYD1_k127_505529_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 3.504e-246 778.0
SYD1_k127_505529_2 Belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 5.172e-208 658.0
SYD1_k127_505529_3 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006513 551.0
SYD1_k127_505529_4 Acyl-transferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000001208 259.0
SYD1_k127_505529_5 Polynucleotide kinase 3 phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000000000000000000000000000000000000002232 245.0
SYD1_k127_505529_6 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000004502 164.0
SYD1_k127_505529_7 Protein of unknown function DUF45 K07043 - - 0.000000000000000000000000000000000000001109 157.0
SYD1_k127_505529_8 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000004872 143.0
SYD1_k127_5065703_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 2.718e-281 871.0
SYD1_k127_5065703_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.000000000000000000000000000000000000003097 149.0
SYD1_k127_5088195_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000006365 241.0
SYD1_k127_5090617_0 surface antigen (D15) K07278 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000626 391.0
SYD1_k127_5090617_1 TPR repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009801 341.0
SYD1_k127_5090617_2 protein conserved in bacteria K09800 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032940,GO:0032991,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0097347 - 0.00000002243 65.0
SYD1_k127_509384_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 3.666e-285 880.0
SYD1_k127_509384_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 6.36e-280 863.0
SYD1_k127_509384_10 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000000000000008709 180.0
SYD1_k127_509384_11 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000000000000000000000001323 145.0
SYD1_k127_509384_12 CoA binding domain K06929 - - 0.00000000000000000000000000000000994 133.0
SYD1_k127_509384_2 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 2.293e-266 835.0
SYD1_k127_509384_3 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 5.368e-198 638.0
SYD1_k127_509384_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 492.0
SYD1_k127_509384_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007578 422.0
SYD1_k127_509384_6 Belongs to the hyi family K01816,K22131 - 5.3.1.22,5.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005062 272.0
SYD1_k127_509384_7 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000001576 215.0
SYD1_k127_509384_8 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000000000000000000000000000000000008006 196.0
SYD1_k127_509384_9 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.0000000000000000000000000000000000000000000000000003322 189.0
SYD1_k127_5123913_0 PFAM glucose-methanol-choline oxidoreductase K00108 - 1.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006737 572.0
SYD1_k127_5123913_1 Predicted metal-dependent hydrolase K07044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 425.0
SYD1_k127_5123913_2 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000002701 135.0
SYD1_k127_5123913_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000004451 135.0
SYD1_k127_5123913_4 - - - - 0.00000000000000001034 86.0
SYD1_k127_5123913_5 Anti-sigma-K factor rskA - - - 0.0000000000003406 78.0
SYD1_k127_5123913_6 isochorismatase hydrolase - - - 0.00000000003495 65.0
SYD1_k127_5134152_0 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family - - - 0.0000000000000000000000000000004539 129.0
SYD1_k127_5134152_1 - - - - 0.000000000000199 74.0
SYD1_k127_5140723_0 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000119 239.0
SYD1_k127_5140723_1 flagellar hook-associated protein K02396 - - 0.00000000000000000000000000003677 126.0
SYD1_k127_5140723_2 Belongs to the bacterial flagellin family K02397 GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.0000000000000000000000001187 118.0
SYD1_k127_5160989_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1301.0
SYD1_k127_5160989_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 4.202e-225 706.0
SYD1_k127_5160989_10 Redoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000003903 258.0
SYD1_k127_5160989_11 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000001748 234.0
SYD1_k127_5160989_12 Peptidase family M23 K08259 - 3.4.24.75 0.00000000000000000000000000000000000000000000000000000000000008499 225.0
SYD1_k127_5160989_13 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.00000000000000000000000000000000000000000000000000008985 195.0
SYD1_k127_5160989_14 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.0000000000003259 71.0
SYD1_k127_5160989_15 Protein of unknown function (DUF721) - - - 0.0001179 51.0
SYD1_k127_5160989_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 3.196e-213 667.0
SYD1_k127_5160989_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 551.0
SYD1_k127_5160989_4 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 527.0
SYD1_k127_5160989_5 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 454.0
SYD1_k127_5160989_6 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 436.0
SYD1_k127_5160989_7 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003205 404.0
SYD1_k127_5160989_8 Cell wall formation K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 395.0
SYD1_k127_5160989_9 SMART AAA ATPase K06923 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002625 331.0
SYD1_k127_5186102_0 amino acid activation for nonribosomal peptide biosynthetic process K17713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 527.0
SYD1_k127_5186102_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003578 420.0
SYD1_k127_5186102_2 Acyltransferase ws dgat mgat K00635 - 2.3.1.20 0.00000000000000006889 81.0
SYD1_k127_5186102_3 Bacterial regulatory proteins, tetR family - - - 0.00000000001208 73.0
SYD1_k127_5186102_4 Adenylate and Guanylate cyclase catalytic domain - - - 0.00000348 53.0
SYD1_k127_5210189_0 cellulase activity - - - 0.0000000000000000000000000000000172 138.0
SYD1_k127_5210189_1 Subtilase family K14645 - - 0.00000002824 62.0
SYD1_k127_5220284_0 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003035 286.0
SYD1_k127_5220284_1 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.00000000000000000000000000000000001255 139.0
SYD1_k127_5221514_0 oxidoreductase K04090 - 1.2.7.8 2.801e-214 683.0
SYD1_k127_5223737_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008152 576.0
SYD1_k127_5223737_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000003813 214.0
SYD1_k127_5231844_0 Iron-containing alcohol dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 428.0
SYD1_k127_52323_0 oxidase, subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005752 442.0
SYD1_k127_52323_1 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 288.0
SYD1_k127_5232703_0 FecR protein - - - 0.0000000000000000000000000781 117.0
SYD1_k127_5232703_1 Passenger-associated-transport-repeat - - - 0.00001602 57.0
SYD1_k127_527595_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 7.286e-216 680.0
SYD1_k127_527595_1 Actin K03569 - - 6.023e-200 626.0
SYD1_k127_527595_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006679 297.0
SYD1_k127_527595_3 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000013 277.0
SYD1_k127_527595_4 Rod shape-determining protein mreD K03571 - - 0.0000000000000000000000000000000000000000000000016 179.0
SYD1_k127_527595_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000003406 113.0
SYD1_k127_527595_6 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.00002135 48.0
SYD1_k127_5332765_0 peptidase U62, modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000061 530.0
SYD1_k127_5332765_1 Probable molybdopterin binding domain K03831 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019538,GO:0019637,GO:0019693,GO:0032324,GO:0034641,GO:0042278,GO:0042802,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061598,GO:0070566,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.7.7.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006989 297.0
SYD1_k127_5332765_2 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001229 277.0
SYD1_k127_5332765_3 Serine hydrolase (FSH1) K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000005755 227.0
SYD1_k127_5332765_4 Protein of unknown function (DUF615) K09889 - - 0.000000000000000000000000000008649 125.0
SYD1_k127_5332765_5 Protein of unknown function (DUF3717) - - - 0.00000000009717 64.0
SYD1_k127_5332765_6 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000001806 60.0
SYD1_k127_5333541_0 2-methylisocitrate dehydratase, Fe S-dependent K20455 - 4.2.1.117 0.0 1380.0
SYD1_k127_5333541_1 Belongs to the citrate synthase family K01659 - 2.3.3.5 3.326e-242 750.0
SYD1_k127_5333541_10 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 - - 0.000000000000000000000000000000000000000000003279 166.0
SYD1_k127_5333541_11 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 GO:0000104,GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 0.0000000000000000000004725 95.0
SYD1_k127_5333541_12 DsrE/DsrF-like family K09004 - - 0.0000000000000000002 94.0
SYD1_k127_5333541_13 - - - - 0.00000000000000233 77.0
SYD1_k127_5333541_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000489 556.0
SYD1_k127_5333541_3 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006113,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0015980,GO:0016042,GO:0016054,GO:0016829,GO:0016830,GO:0016833,GO:0016999,GO:0017001,GO:0017144,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019752,GO:0032787,GO:0042737,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0046421,GO:0046459,GO:0046872,GO:0055114,GO:0071704,GO:0072329,GO:1901575 4.1.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006454 498.0
SYD1_k127_5333541_4 propionate catabolism operon regulatory protein K02688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 381.0
SYD1_k127_5333541_5 GntR family K03710 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 301.0
SYD1_k127_5333541_6 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 299.0
SYD1_k127_5333541_7 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000003253 231.0
SYD1_k127_5333541_8 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.0000000000000000000000000000000000000000000000000005252 186.0
SYD1_k127_5333541_9 Pfam:UPF0118 - - - 0.000000000000000000000000000000000000000000000001164 188.0
SYD1_k127_5355611_0 Chemotaxis protein CheA K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009381 443.0
SYD1_k127_5355611_1 MotA/TolQ/ExbB proton channel family K02556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008725 393.0
SYD1_k127_5355611_2 Response regulator receiver K03415 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 356.0
SYD1_k127_5355611_3 PFAM OmpA MotB domain protein K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 348.0
SYD1_k127_5355611_4 Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001936 243.0
SYD1_k127_5355611_5 Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) K03414 - - 0.000000000000000000000000000000000000000000000000000000000000005115 226.0
SYD1_k127_5355611_6 Response regulator receiver K03413 - - 0.00000000000000000000000000000000000000000000000000000001585 200.0
SYD1_k127_5355611_7 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.000000000000000000000000000000006364 130.0
SYD1_k127_5355611_8 Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02403 - - 0.00000000000000000000000000000002822 128.0
SYD1_k127_5360725_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K07788,K07789 - - 0.0 1017.0
SYD1_k127_5360725_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007848 364.0
SYD1_k127_5360725_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006461 304.0
SYD1_k127_5360725_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 310.0
SYD1_k127_5360725_4 - - - - 0.0000000161 61.0
SYD1_k127_5368405_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000002589 159.0
SYD1_k127_5368405_1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00122 - 1.17.1.9 0.000000000000000000000000009943 111.0
SYD1_k127_5397596_0 COG0642 Signal transduction histidine kinase - - - 0.0 1457.0
SYD1_k127_5397596_1 PFAM Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II, Phosphoglucomutase phosphomannomutase, alpha beta alpha domain III, Phosphoglucomutase phosphomannomutase, C-terminal domain, Phosphoglucomutase phosphomannomutase, alpha beta alpha domain I K01835,K01840,K15778 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005488,GO:0005975,GO:0005976,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009244,GO:0009311,GO:0009312,GO:0009405,GO:0009987,GO:0016051,GO:0016053,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0042120,GO:0042121,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044419,GO:0046394,GO:0046401,GO:0046402,GO:0046872,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.4.2.2,5.4.2.8 2.863e-206 651.0
SYD1_k127_5397596_10 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 294.0
SYD1_k127_5397596_11 PFAM HPP family protein K07168 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000372 253.0
SYD1_k127_5397596_13 Endoribonuclease L-PSP - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000438 123.0
SYD1_k127_5397596_14 PAAR motif - - - 0.00000000000000000000000006321 113.0
SYD1_k127_5397596_15 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000001556 93.0
SYD1_k127_5397596_2 Zinc-binding dehydrogenase K12957,K13979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006911 566.0
SYD1_k127_5397596_3 LuxR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003053 384.0
SYD1_k127_5397596_4 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003447 375.0
SYD1_k127_5397596_5 PFAM EAL domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004756 376.0
SYD1_k127_5397596_6 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005592 332.0
SYD1_k127_5397596_7 Regulator K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 310.0
SYD1_k127_5397596_8 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0008144,GO:0016829,GO:0016840,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:1901681,GO:1904047 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 309.0
SYD1_k127_5397596_9 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B K15777 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 307.0
SYD1_k127_5410083_0 D-alanine [D-alanyl carrier protein] ligase activity - - - 0.00000000000000000000000000000000000000000008664 172.0
SYD1_k127_5410083_1 Putative zinc- or iron-chelating domain - - - 0.00000000000000000000000000003093 122.0
SYD1_k127_5432428_0 PFAM Acetamidase Formamidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 295.0
SYD1_k127_5432428_1 - - - - 0.0000000000000000000000001178 108.0
SYD1_k127_5436325_0 chemotaxis sensory transducer K03406 - - 2.464e-234 744.0
SYD1_k127_5436325_1 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000008336 168.0
SYD1_k127_5436325_2 - - - - 0.0000000000000000000008665 100.0
SYD1_k127_5436325_3 Peptidase_C39 like family - - - 0.000000000000000000002044 98.0
SYD1_k127_5440258_0 COG1073 hydrolases of the alpha beta superfamily K06889 - - 0.0000000000000000000000000000000000000000001323 168.0
SYD1_k127_5440258_1 iron--sulfur cluster insertion protein erpA K15724 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0019538,GO:0022607,GO:0031163,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0071704,GO:0071840,GO:1901564 - 0.00000000000000000000000003343 111.0
SYD1_k127_5440258_2 Domain of unknown function (DUF4864) - - - 0.00000000000000008951 87.0
SYD1_k127_5440258_3 Helix-turn-helix domain K15773 - - 0.0000000004533 64.0
SYD1_k127_5440258_4 Belongs to the peptidase S8 family K14645 - - 0.00009933 52.0
SYD1_k127_5474065_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005256 411.0
SYD1_k127_5474065_1 protein required for cytochrome oxidase assembly K02259 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 346.0
SYD1_k127_5474065_2 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003308 301.0
SYD1_k127_5474065_3 signal sequence binding - - - 0.0000000000000000000000000000000000002225 149.0
SYD1_k127_5474065_4 Electron transport protein SCO1 SenC K07152 - - 0.000000000000000000000000002727 116.0
SYD1_k127_5474065_5 Protein of unknown function (DUF2909) - - - 0.0000000000000000000001808 98.0
SYD1_k127_5474065_6 SURF1-like protein - - - 0.0000000000000000003181 98.0
SYD1_k127_5499983_0 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor region - - - 6.192e-214 711.0
SYD1_k127_5499983_1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 GO:0000156,GO:0000160,GO:0003674,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0023052,GO:0035556,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007 - 0.000000000000000000000002956 106.0
SYD1_k127_5499983_2 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.000000000000000006264 91.0
SYD1_k127_5499983_3 response regulator - - - 0.000004038 52.0
SYD1_k127_5499983_4 response regulator, receiver K20973 - 2.7.13.3 0.0001122 49.0
SYD1_k127_5501043_0 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004677 422.0
SYD1_k127_5501043_1 Histidine kinase - - - 0.000000000000000000000000000000001189 136.0
SYD1_k127_5593345_0 osmosensitive K channel K07646 - 2.7.13.3 1.883e-272 865.0
SYD1_k127_5593345_1 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 1.648e-235 739.0
SYD1_k127_5593345_2 regulator K07667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007883 281.0
SYD1_k127_5593345_3 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 0.00000000000000000000000000000000000000000000000003368 184.0
SYD1_k127_5627828_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01531,K12955 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0015399,GO:0015405,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0099131,GO:0099132 3.6.3.2 6.487e-232 722.0
SYD1_k127_5627828_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003589 308.0
SYD1_k127_5640037_0 Type III secretion K03230 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006982 446.0
SYD1_k127_5640037_1 PFAM ATP synthase alpha beta family, beta-barrel domain, ATP synthase alpha beta family, nucleotide-binding domain K03224 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006408 408.0
SYD1_k127_5640037_2 Methionine synthase K00548 - 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 344.0
SYD1_k127_5640037_3 Part of a set of proteins involved in the infection of eukaryotic cells K03226 - - 0.000000000000000000000000000000000000000000000000000003021 197.0
SYD1_k127_5640037_4 yop proteins translocation protein U K03229 - - 0.000000000000000000000000000000000000000000000001471 187.0
SYD1_k127_5640037_5 Type III secretion K03228 - - 0.00000000000004674 82.0
SYD1_k127_5640037_6 type iii secretion K22508 - - 0.0000000000003344 72.0
SYD1_k127_5640037_7 Type III secretion K03220 - - 0.0000001084 63.0
SYD1_k127_5689693_0 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002729 613.0
SYD1_k127_5689693_1 MacB-like periplasmic core domain K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 393.0
SYD1_k127_5689693_2 Membrane K08984 - - 0.00000000000000000000000000000000000000001991 159.0
SYD1_k127_5689693_3 Protein conserved in bacteria - - - 0.00000000000141 79.0
SYD1_k127_5711695_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 541.0
SYD1_k127_5711695_1 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K15578 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 470.0
SYD1_k127_5711695_2 FAD binding domain K11472 - - 0.0000000000000000000000000000000000000000000000000366 184.0
SYD1_k127_5711695_3 ABC-type nitrate sulfonate bicarbonate transport system, permease component K15577 - - 0.0000005415 51.0
SYD1_k127_5742903_0 transport system fused permease components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001349 266.0
SYD1_k127_5742903_1 Domain of unknown function (DUF1850) - - - 0.000000000000000000000002343 110.0
SYD1_k127_5742903_2 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) - - - 0.0000001632 53.0
SYD1_k127_5755789_0 Neisseria PilC beta-propeller domain K02674 - - 0.0 1298.0
SYD1_k127_5755789_1 Penicillin amidase K01434 - 3.5.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 523.0
SYD1_k127_5755789_2 Cobyrinic acid ac-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008825 378.0
SYD1_k127_5755789_3 Prokaryotic N-terminal methylation motif K02672 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 314.0
SYD1_k127_5755789_4 PilX N-terminal - - - 0.000000000000000000000000000000000000000006191 161.0
SYD1_k127_5755789_5 pilus modification protein PilV K02671 - - 0.0000000000000000000000000000000002479 138.0
SYD1_k127_5755789_6 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.000000000000000000000000000002831 126.0
SYD1_k127_5755789_7 Type II transport protein GspH K08084 - - 0.000000000000000000000002603 109.0
SYD1_k127_5755789_8 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000005958 95.0
SYD1_k127_5755789_9 peptidase, s15 - - - 0.000000000000003202 77.0
SYD1_k127_5758833_0 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000001329 175.0
SYD1_k127_5768976_0 Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress K05916 - 1.14.12.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005409 370.0
SYD1_k127_5768976_1 PFAM TatD-related deoxyribonuclease K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006993 284.0
SYD1_k127_5768976_2 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.0000000000000000000000000000000000000000001131 167.0
SYD1_k127_5768976_3 Nitric oxide-sensitive repressor of genes involved in protecting the cell against nitrosative stress. May require iron for activity K13771 - - 0.0000000000000000000000000000000000002123 146.0
SYD1_k127_5768976_4 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.000000000000000000009509 93.0
SYD1_k127_5769164_0 Pfam Homocysteine S-methyltransferase K00548 - 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 391.0
SYD1_k127_5769164_1 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000001832 136.0
SYD1_k127_5773931_0 Acetyl-coenzyme A synthetase N-terminus K01908 - 6.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 326.0
SYD1_k127_5773931_1 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 0.00000000002754 63.0
SYD1_k127_5774162_0 peptidase U32 K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006175 305.0
SYD1_k127_5774162_1 Auxin Efflux Carrier K07088 - - 0.00000000000000000000000000000006063 127.0
SYD1_k127_5784936_0 Saccharopine dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 512.0
SYD1_k127_5784936_1 Diguanylate cyclase - - - 0.000000000000000000000000003951 120.0
SYD1_k127_5786380_0 NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005977 555.0
SYD1_k127_5786380_1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 384.0
SYD1_k127_5786380_2 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K19745 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 313.0
SYD1_k127_5786380_3 COG0695 Glutaredoxin and related proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 290.0
SYD1_k127_5786380_4 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007148 267.0
SYD1_k127_5786380_5 EamA-like transporter family - - - 0.000000000000000000000002551 106.0
SYD1_k127_58333_0 GXGXG motif K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.0 2586.0
SYD1_k127_58333_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 6.005e-256 796.0
SYD1_k127_58333_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 6.599e-228 712.0
SYD1_k127_58333_3 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009403 537.0
SYD1_k127_58333_4 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009333 467.0
SYD1_k127_58333_5 PFAM type II and III secretion system protein K02666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 368.0
SYD1_k127_58333_6 mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006628 283.0
SYD1_k127_58333_7 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000000000000006717 192.0
SYD1_k127_58333_8 transposase K07491 - - 0.000000000000000000000000000000000005158 145.0
SYD1_k127_58333_9 - - - - 0.000000000000000000000000000001382 130.0
SYD1_k127_5864404_0 PFAM peptidase M3A and M3B, thimet oligopeptidase F K01414 - 3.4.24.70 3.98e-273 857.0
SYD1_k127_5864404_1 glutamine synthetase K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 4.027e-268 829.0
SYD1_k127_5864404_10 PFAM molybdopterin biosynthesis MoaE K03635 - 2.8.1.12 0.0000000000000000000000000000000000000000000000000000000000001761 214.0
SYD1_k127_5864404_11 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.00000000000000000000000000000000000000000000000000000004459 199.0
SYD1_k127_5864404_12 - - - - 0.0000000000000000000005414 103.0
SYD1_k127_5864404_13 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.00000000000000003362 84.0
SYD1_k127_5864404_2 TIGRFAM nitrogen regulation protein NR(I) K07712 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0043565,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 5.763e-212 669.0
SYD1_k127_5864404_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 421.0
SYD1_k127_5864404_4 Signal transduction histidine kinase, nitrogen specific K07708 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 417.0
SYD1_k127_5864404_5 Molybdenum cofactor synthesis K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 383.0
SYD1_k127_5864404_6 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 342.0
SYD1_k127_5864404_7 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 331.0
SYD1_k127_5864404_8 chemotaxis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 308.0
SYD1_k127_5864404_9 Regulator K13041 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000008285 235.0
SYD1_k127_5865206_0 Phosphoesterase family - - - 0.00000000000000000000000000000000000000000000000000000000004458 212.0
SYD1_k127_5893824_0 GDP-mannose 4,6 dehydratase K01711 - 4.2.1.47 1.745e-208 651.0
SYD1_k127_5893824_1 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000009104 69.0
SYD1_k127_5897777_0 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 483.0
SYD1_k127_5897777_1 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 376.0
SYD1_k127_5897777_2 alpha/beta hydrolase fold K01432 - 3.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 310.0
SYD1_k127_5897777_3 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000001322 214.0
SYD1_k127_5897777_4 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.00000000000000000000000000000000002956 139.0
SYD1_k127_590324_0 transglutaminase domain protein - - - 2.34e-248 781.0
SYD1_k127_590324_1 Pyridoxamine 5'-phosphate oxidase K00275 - 1.4.3.5 0.000000000001948 70.0
SYD1_k127_5903363_0 Sulfate tungstate uptake family ABC transporter, periplasmic substrate-binding protein K05772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004633 365.0
SYD1_k127_5903363_1 ABC-type polar amino acid transport system ATPase component K06857 - 3.6.3.55 0.00000000000000000000000000000000000000000000000000000000000001656 222.0
SYD1_k127_5903363_2 COG1910, Periplasmic molybdate-binding protein domain - - - 0.0000000000000000000000000007976 116.0
SYD1_k127_5907271_0 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 481.0
SYD1_k127_5907271_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 430.0
SYD1_k127_5907271_2 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 398.0
SYD1_k127_5907271_3 HflC and HflK could regulate a protease K04087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 381.0
SYD1_k127_5907271_4 UPF0761 membrane protein K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003686 290.0
SYD1_k127_5907271_5 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000000000000000000000008839 142.0
SYD1_k127_5907271_6 protein conserved in bacteria K09937 - - 0.000000000001725 71.0
SYD1_k127_5916271_0 Belongs to the IlvD Edd family K01690 - 4.2.1.12 6.575e-202 645.0
SYD1_k127_5916271_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007375 399.0
SYD1_k127_5916271_10 COG4149 ABC-type molybdate transport system, permease component K02018 - - 0.00000000000000000000000000000001949 128.0
SYD1_k127_5916271_11 Membrane - - - 0.0000000000001855 71.0
SYD1_k127_5916271_12 BFD-like [2Fe-2S] binding domain K02192 - - 0.0001075 47.0
SYD1_k127_5916271_2 ATPases associated with a variety of cellular activities K02010,K02017,K11072 - 3.6.3.29,3.6.3.30,3.6.3.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 386.0
SYD1_k127_5916271_3 Belongs to the GPI family K01810 - 5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 332.0
SYD1_k127_5916271_4 PFAM helix-turn-helix protein RpiR K19337 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006814 267.0
SYD1_k127_5916271_5 Iron-storage protein K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000002001 235.0
SYD1_k127_5916271_6 PFAM Carbohydrate-selective porin OprB - - - 0.000000000000000000000000000000000000000000000000000000000000000000171 244.0
SYD1_k127_5916271_7 Aldolase K01625 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 4.1.2.14,4.1.3.42 0.000000000000000000000000000000000000000000168 168.0
SYD1_k127_5916271_8 SMP-30 Gluconolaconase K13874,K14274 - 3.1.1.15 0.000000000000000000000000000000000000001784 159.0
SYD1_k127_5916271_9 Imelysin K07338 - - 0.000000000000000000000000000000007876 141.0
SYD1_k127_5920455_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 0.0 1668.0
SYD1_k127_5920455_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1257.0
SYD1_k127_5920455_10 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 437.0
SYD1_k127_5920455_11 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 445.0
SYD1_k127_5920455_12 peptidylprolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 401.0
SYD1_k127_5920455_13 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 345.0
SYD1_k127_5920455_14 Protein of unknown function (DUF3422) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008539 344.0
SYD1_k127_5920455_15 secretion protein HlyD family K03543 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 339.0
SYD1_k127_5920455_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003993 312.0
SYD1_k127_5920455_17 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758 - 4.2.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411 313.0
SYD1_k127_5920455_18 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000000000000002471 257.0
SYD1_k127_5920455_19 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000003218 244.0
SYD1_k127_5920455_2 Multicopper oxidase K22348 - 1.16.3.3 3.231e-257 799.0
SYD1_k127_5920455_20 GDSL-like Lipase/Acylhydrolase K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000006361 217.0
SYD1_k127_5920455_21 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000001136 222.0
SYD1_k127_5920455_22 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000125 179.0
SYD1_k127_5920455_23 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000003596 183.0
SYD1_k127_5920455_24 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000000000000000000000000000336 151.0
SYD1_k127_5920455_25 COG0642 Signal transduction histidine kinase - - - 0.00000000000000000000000000001097 121.0
SYD1_k127_5920455_26 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.00000000000000000000005738 104.0
SYD1_k127_5920455_27 Domain of unknown function (DUF305) - - - 0.00000000000000000001608 100.0
SYD1_k127_5920455_28 Copper binding periplasmic protein CusF - - - 0.000000000007406 69.0
SYD1_k127_5920455_29 - - - - 0.00000000004236 63.0
SYD1_k127_5920455_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 3.205e-252 793.0
SYD1_k127_5920455_30 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.000000008059 60.0
SYD1_k127_5920455_31 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000001036 60.0
SYD1_k127_5920455_32 PFAM lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.0001071 44.0
SYD1_k127_5920455_34 - - - - 0.0005206 47.0
SYD1_k127_5920455_4 acetyl-coa hydrolase - - - 2.086e-227 726.0
SYD1_k127_5920455_5 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 3.974e-222 694.0
SYD1_k127_5920455_6 heavy metal translocating P-type ATPase K01534 - 3.6.3.3,3.6.3.5 9.83e-200 645.0
SYD1_k127_5920455_7 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008942 518.0
SYD1_k127_5920455_8 Major facilitator superfamily K03446 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 504.0
SYD1_k127_5920455_9 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 487.0
SYD1_k127_5934645_0 Belongs to the thiolase family K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 593.0
SYD1_k127_5934645_1 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.00000000000000000000000000000005234 125.0
SYD1_k127_5963615_0 FAD linked oxidase domain protein - - - 0.0 1892.0
SYD1_k127_5963615_1 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 8.243e-205 651.0
SYD1_k127_5963615_10 Tim44 - - - 0.00000000000000000000000000000000000009549 154.0
SYD1_k127_5963615_11 SCP-2 sterol transfer family K03690 - - 0.00000000000000000000002187 108.0
SYD1_k127_5963615_2 COG0038 Chloride channel protein EriC - - - 2.466e-200 643.0
SYD1_k127_5963615_3 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 599.0
SYD1_k127_5963615_4 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 GO:0000003,GO:0000096,GO:0000097,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005777,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0007568,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009507,GO:0009532,GO:0009536,GO:0009566,GO:0009567,GO:0009570,GO:0009653,GO:0009826,GO:0009856,GO:0009860,GO:0009932,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016043,GO:0016049,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0019953,GO:0022414,GO:0030154,GO:0030170,GO:0031090,GO:0032501,GO:0032502,GO:0032989,GO:0036094,GO:0040007,GO:0042221,GO:0042579,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0046394,GO:0046686,GO:0048037,GO:0048046,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050662,GO:0050896,GO:0051704,GO:0060560,GO:0070279,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002302 499.0
SYD1_k127_5963615_5 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657,K07664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 380.0
SYD1_k127_5963615_6 TIGRFAM phosphate regulon sensor kinase PhoR K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 378.0
SYD1_k127_5963615_7 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005461 356.0
SYD1_k127_5963615_8 Protein of unknown function (DUF971) - - - 0.00000000000000000000000000000000000000000000000000006339 190.0
SYD1_k127_5963615_9 HIT domain - - - 0.00000000000000000000000000000000000001356 151.0
SYD1_k127_5969997_0 Vitamin B12 dependent methionine synthase activation region K00548 - 2.1.1.13 0.0 1079.0
SYD1_k127_5994118_0 - - - - 0.000000000000000000000000000000000003766 142.0
SYD1_k127_5994118_1 amino acid - - - 0.000000000000000000000000004803 112.0
SYD1_k127_5994118_2 Carbohydrate-selective porin, OprB family K16080 - - 0.00000000003415 66.0
SYD1_k127_5994259_0 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 6.128e-216 674.0
SYD1_k127_5994259_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 418.0
SYD1_k127_5994259_2 Peptidase M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006949 263.0
SYD1_k127_5994259_3 Nlpbdapx family lipoprotein K07287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002307 269.0
SYD1_k127_5994259_4 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002706 258.0
SYD1_k127_5994259_5 tellurite resistance protein - - - 0.00000000000000000000000000000000000803 143.0
SYD1_k127_6002102_0 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000024 81.0
SYD1_k127_6013578_0 Glycolate oxidase subunit K00102,K00104,K03777 - 1.1.2.4,1.1.3.15,1.1.5.12 8.439e-236 737.0
SYD1_k127_6013578_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004365 419.0
SYD1_k127_6013578_2 dipeptidyl-peptidase activity K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 314.0
SYD1_k127_6013578_3 FAD binding K11472 - - 0.00000000000000000000000000000000000000000000000005734 181.0
SYD1_k127_6013578_4 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00362,K05297 - 1.18.1.1,1.7.1.15 0.000000000000000000000000000000000000000000000003173 176.0
SYD1_k127_6013578_5 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000007046 153.0
SYD1_k127_6018217_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.0 1057.0
SYD1_k127_6018217_1 Sulfite exporter TauE/SafE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 293.0
SYD1_k127_6018217_2 Protein of unknown function (DUF1348) K09958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000664 265.0
SYD1_k127_6018217_3 Belongs to the UPF0178 family K09768 - - 0.00000000000000000000000000000000000000000000000000000000000001188 219.0
SYD1_k127_6018217_4 sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000000000000000000002545 200.0
SYD1_k127_6018217_5 Acyl transferase domain K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000003329 180.0
SYD1_k127_6018217_6 Protein of unknown function (DUF1109) - - - 0.00000000000000000000000000000000000000001784 160.0
SYD1_k127_6018217_7 - - - - 0.00000000000000000001301 96.0
SYD1_k127_603923_0 TRAP transporter, 4TM 12TM fusion protein - - - 5.262e-295 920.0
SYD1_k127_603923_1 TRAP transporter solute receptor TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007469 452.0
SYD1_k127_603923_2 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.0000000000000000000000000000000006199 135.0
SYD1_k127_6047542_0 Belongs to the amidase family K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000002895 199.0
SYD1_k127_6047542_1 Hsp20/alpha crystallin family - - - 0.0000000000000000000000000000000000000000000000000414 183.0
SYD1_k127_6047542_2 Belongs to the UPF0225 family K09858 - - 0.0000000000000000000000000000000000000004055 153.0
SYD1_k127_6047542_3 5-oxoprolinase (ATP-hydrolyzing) activity K01457,K06351,K07160 - 3.5.1.54 0.0000000000000000000000000000000000000004979 158.0
SYD1_k127_6048574_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 9.243e-233 729.0
SYD1_k127_6048574_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.632e-219 694.0
SYD1_k127_6048574_10 FIST_C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 299.0
SYD1_k127_6048574_11 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001245 283.0
SYD1_k127_6048574_12 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004552 274.0
SYD1_k127_6048574_13 Alpha beta K07018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003373 250.0
SYD1_k127_6048574_14 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002175 252.0
SYD1_k127_6048574_15 cyclopropane-fatty-acyl-phospholipid synthase K00574 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000683 251.0
SYD1_k127_6048574_16 Thiol disulfide interchange protein K03673 - - 0.0000000000000000000000000000000000000000000000004316 183.0
SYD1_k127_6048574_17 Ferredoxin - - - 0.0000000000000000000000000000000000000000002654 160.0
SYD1_k127_6048574_18 VanZ like family - - - 0.0000000000000000000000000000000000003112 156.0
SYD1_k127_6048574_19 dihydroneopterin aldolase K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000000000000001089 136.0
SYD1_k127_6048574_2 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 1.613e-199 629.0
SYD1_k127_6048574_20 - - - - 0.000000000000000000000000000000006329 136.0
SYD1_k127_6048574_21 Biotin protein ligase C terminal domain K03524 - 6.3.4.15 0.0000000000000000000000000007397 123.0
SYD1_k127_6048574_22 Belongs to the UPF0250 family K09158 - - 0.00000000000000000000000001365 111.0
SYD1_k127_6048574_23 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K01947,K03525 - 2.7.1.33,6.3.4.15 0.0000000000000000000107 102.0
SYD1_k127_6048574_24 Sporulation related domain - - - 0.0000000000000000003192 95.0
SYD1_k127_6048574_25 Copper chaperone PCu(A)C K09796 - - 0.000001215 57.0
SYD1_k127_6048574_26 Sporulation related domain - - - 0.0002384 51.0
SYD1_k127_6048574_3 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 567.0
SYD1_k127_6048574_4 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007318 492.0
SYD1_k127_6048574_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006764 483.0
SYD1_k127_6048574_6 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006951 440.0
SYD1_k127_6048574_7 Belongs to the peptidase S11 family K01286,K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008577 431.0
SYD1_k127_6048574_8 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000453 353.0
SYD1_k127_6048574_9 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004036 309.0
SYD1_k127_6055004_0 COG3243 Poly(3-hydroxyalkanoate) synthetase K03821 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 375.0
SYD1_k127_6055004_1 PFAM HAMP domain, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, His Kinase A (phosphoacceptor) domain K02484,K07640,K07642 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000001523 280.0
SYD1_k127_6055004_10 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000000000000000000001171 125.0
SYD1_k127_6055004_11 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.000000000000000006325 85.0
SYD1_k127_6055004_12 - - - - 0.0000000000003405 79.0
SYD1_k127_6055004_13 Heavy-metal resistance K06006 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0008150,GO:0009987,GO:0010033,GO:0014070,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0044464,GO:0050896,GO:0051082,GO:0061077,GO:1990507 - 0.000000002547 65.0
SYD1_k127_6055004_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000009003 257.0
SYD1_k127_6055004_3 Type III secretion protein K03219 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000783 268.0
SYD1_k127_6055004_4 Membrane MotB of proton-channel complex MotA/MotB - - - 0.000000000000000000000000000000000000000000000000000000000000000000001083 244.0
SYD1_k127_6055004_5 response regulator K02483,K07662 - - 0.000000000000000000000000000000000000000000000000000000000000000000003576 241.0
SYD1_k127_6055004_6 NAD(P)H-binding - - - 0.0000000000000000000000000000000000000000000000000000000005436 209.0
SYD1_k127_6055004_7 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000004471 190.0
SYD1_k127_6055004_8 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000003273 192.0
SYD1_k127_6055004_9 Secretory protein of YscJ/FliF family K03222 - - 0.00000000000000000000000000000000000000000000001206 183.0
SYD1_k127_6081639_0 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 522.0
SYD1_k127_6081639_1 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K21345 - 2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000006752 234.0
SYD1_k127_6081639_2 SnoaL-like domain K01822 - 5.3.3.1 0.000000000000000000000000000000000000000003566 158.0
SYD1_k127_6088522_0 PFAM glycoside hydrolase family 8 K01179,K20542 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004869 304.0
SYD1_k127_6088522_1 cellulose synthase K20541 - - 0.00000000000000000000000000000000000000000000000000000498 200.0
SYD1_k127_6088522_2 Cellulose synthase K20543 - - 0.00000001998 66.0
SYD1_k127_6088522_3 PFAM Cellulose synthase operon K20543 - - 0.0000001883 63.0
SYD1_k127_6093071_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1060.0
SYD1_k127_6093071_1 GTP-binding protein K06207 - - 1.913e-269 838.0
SYD1_k127_6093071_2 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007749 283.0
SYD1_k127_6093071_3 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000003447 178.0
SYD1_k127_6093071_4 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000000000000000001054 154.0
SYD1_k127_611505_0 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0010467,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0050896,GO:0051604,GO:0051716,GO:0070417,GO:0071704,GO:0097159,GO:0097367,GO:0097428,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1990230,GO:1990234 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 303.0
SYD1_k127_611505_1 Ferredoxin, 2Fe-2S type, ISC system K04755 - - 0.0000000000000000000000000000000000000000000000000335 180.0
SYD1_k127_611505_2 Fe-S assembly protein IscX - - - 0.0000000000000000000000000002086 115.0
SYD1_k127_6159433_0 Belongs to the mannose-6-phosphate isomerase type 2 family K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 311.0
SYD1_k127_6175325_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K04090 - 1.2.7.8 2.265e-198 627.0
SYD1_k127_6175325_1 - - - - 0.00000000000000000000000001576 119.0
SYD1_k127_6180192_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000957 409.0
SYD1_k127_6180192_1 KR domain K00019 - 1.1.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006633 372.0
SYD1_k127_6180192_2 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 350.0
SYD1_k127_6180192_3 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 325.0
SYD1_k127_6180192_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000000006201 208.0
SYD1_k127_6180192_5 - - - - 0.00000000000000000000000000000000009142 138.0
SYD1_k127_6214738_0 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 484.0
SYD1_k127_6214738_1 Flagellar basal body rod FlgEFG protein C-terminal K02392 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000827 386.0
SYD1_k127_6214738_10 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.000000000000000000000000000008172 124.0
SYD1_k127_6214738_11 Flagella basal body p-ring formation protein K02386 - - 0.000000000000006863 84.0
SYD1_k127_6214738_12 Flagellar rod assembly protein muramidase FlgJ K02395 - - 0.00000000000002666 79.0
SYD1_k127_6214738_13 bacterial-type flagellum organization K02398 GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0009892,GO:0010556,GO:0010605,GO:0016989,GO:0019219,GO:0019222,GO:0030162,GO:0031323,GO:0031324,GO:0031326,GO:0032268,GO:0032269,GO:0045861,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 - 0.0001569 48.0
SYD1_k127_6214738_14 PFAM FlgN family protein K02399 - - 0.0001758 50.0
SYD1_k127_6214738_2 Flagellar basal body rod K02390 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 337.0
SYD1_k127_6214738_3 Flagellar basal-body rod protein FlgF K02391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002443 248.0
SYD1_k127_6214738_4 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000926 234.0
SYD1_k127_6214738_5 Belongs to the flagella basal body rod proteins family K02396 - - 0.000000000000000000000000000000000000000000000000000000000003711 221.0
SYD1_k127_6214738_6 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.0000000000000000000000000000000000000000000000004496 183.0
SYD1_k127_6214738_7 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.00000000000000000000000000000000000000001105 161.0
SYD1_k127_6214738_8 Belongs to the flagella basal body rod proteins family K02388 - - 0.00000000000000000000000000000000000000002074 156.0
SYD1_k127_6214738_9 PFAM response regulator receiver - - - 0.00000000000000000000000000000001389 132.0
SYD1_k127_6223705_0 Aspartate ammonia-lyase K01744 - 4.3.1.1 1.78e-196 623.0
SYD1_k127_6223705_1 PFAM regulatory protein, LysR K21645 - - 0.0000000000003039 74.0
SYD1_k127_6252473_0 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 428.0
SYD1_k127_6252473_1 NAD-dependent epimerase dehydratase K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 375.0
SYD1_k127_6252473_2 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.000000000000000000000001316 106.0
SYD1_k127_6252989_0 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 422.0
SYD1_k127_6252989_1 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009853 284.0
SYD1_k127_6266912_0 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog - - - 5.555e-243 767.0
SYD1_k127_6266912_1 domain, Protein - - - 0.0000000000000000000009446 102.0
SYD1_k127_6266912_2 - - - - 0.0000002583 58.0
SYD1_k127_6275473_0 beta-keto acid cleavage enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 559.0
SYD1_k127_6275473_1 regulatory protein LuxR K03556,K21748 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 533.0
SYD1_k127_6275473_2 Taurine catabolism dioxygenase TauD, TfdA family K03119 - 1.14.11.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 482.0
SYD1_k127_628516_0 TIGRFAM PQQ-dependent dehydrogenase, methanol ethanol family - - - 8.247e-256 802.0
SYD1_k127_628516_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K22209 - 4.2.1.81 7.212e-243 752.0
SYD1_k127_628516_2 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007974 411.0
SYD1_k127_628516_3 Nitronate monooxygenase K00459,K02371 - 1.13.12.16,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 346.0
SYD1_k127_628516_4 His Kinase A phosphoacceptor domain-containing protein 13 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003316 301.0
SYD1_k127_628516_5 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000149 254.0
SYD1_k127_628516_6 methionine sulfoxide reductase K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000001347 213.0
SYD1_k127_628516_7 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000001058 206.0
SYD1_k127_628516_8 Protein of unknown function (DUF1223) - - - 0.000000000000000000000000000000000000000000000001633 184.0
SYD1_k127_628516_9 FecR protein - - - 0.00000000000000000000000000000000000000155 164.0
SYD1_k127_6291797_0 Membrane - - - 0.00000000000000000000000000000000000000007209 165.0
SYD1_k127_6291797_1 O-Antigen ligase - - - 0.0000000000000000000000004477 118.0
SYD1_k127_6340122_0 COG1403 Restriction endonuclease - - - 0.000000000000000000000000000000000000004264 149.0
SYD1_k127_6340122_1 PFAM HAMP domain, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, His Kinase A (phosphoacceptor) domain, Two-component sensor kinase N-terminal K07649 - 2.7.13.3 0.0000000000000000000000000000000004998 135.0
SYD1_k127_6340122_2 protein conserved in bacteria K09824 - - 0.000000000000000000000000169 118.0
SYD1_k127_6341275_0 Bestrophin, RFP-TM, chloride channel K08994 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003457 306.0
SYD1_k127_6341275_1 permeases of the major facilitator superfamily K08217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004401 261.0
SYD1_k127_6343926_0 Beta-eliminating lyase K12452 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000614 576.0
SYD1_k127_6343926_1 Male sterility protein K12454 - 5.1.3.10 0.0000000000000000000000000000000000000000000000000000000000000000004091 231.0
SYD1_k127_6343926_2 NAD-dependent epimerase dehydratase K19180 - 1.1.1.339 0.00000000000000000000000000000000000000000000000000003423 198.0
SYD1_k127_6343926_3 Belongs to the DegT DnrJ EryC1 family K12452,K13328 - 1.17.1.1,4.2.1.164 0.000000000000000000000000000000000000000001366 156.0
SYD1_k127_6345250_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000007368 238.0
SYD1_k127_6345250_1 - - - - 0.000000000000000000000000000002703 127.0
SYD1_k127_6345250_2 HDOD domain - - - 0.00000002196 64.0
SYD1_k127_6349391_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 475.0
SYD1_k127_6349391_1 overlaps another CDS with the same product name K19713 - 1.8.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 430.0
SYD1_k127_6349391_2 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 329.0
SYD1_k127_6349391_3 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000001112 269.0
SYD1_k127_6349391_4 Chemotaxis signal transduction protein K03408 - - 0.0000000000000000000000000000000000000000000000713 174.0
SYD1_k127_6349391_5 MMPL family K07003 - - 0.0000000000000000000000006204 105.0
SYD1_k127_6349391_6 DSBA-like thioredoxin domain - - - 0.0000000000000167 75.0
SYD1_k127_6351257_0 cyanophycin synthetase K03802 - 6.3.2.29,6.3.2.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008875 453.0
SYD1_k127_6351257_1 ATP-grasp domain K03802 - 6.3.2.29,6.3.2.30 0.00000006804 55.0
SYD1_k127_6390591_0 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004013 420.0
SYD1_k127_6390591_1 Histidine-specific methyltransferase, SAM-dependent - - - 0.00000000000000000000000000000000000002697 149.0
SYD1_k127_6390591_2 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.0000000000000000005972 88.0
SYD1_k127_6455286_0 Fic/DOC family N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004456 499.0
SYD1_k127_6455286_1 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 350.0
SYD1_k127_6499390_0 AcrB/AcrD/AcrF family K15726 - - 0.0 1069.0
SYD1_k127_6499390_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.0000000000000000000000000000000000000005751 153.0
SYD1_k127_651334_0 flavoprotein involved in K transport - - - 8.619e-230 720.0
SYD1_k127_651334_1 Chromate K07240 - - 2.398e-218 686.0
SYD1_k127_651334_10 - - - - 0.00000000000232 67.0
SYD1_k127_651334_11 ABC-type polar amino acid transport system ATPase component K06857 - 3.6.3.55 0.00000000007996 66.0
SYD1_k127_651334_2 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 517.0
SYD1_k127_651334_3 Isochorismatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 375.0
SYD1_k127_651334_4 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004812 337.0
SYD1_k127_651334_5 Binding-protein-dependent transport system inner membrane component K05773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003758 274.0
SYD1_k127_651334_6 Uncharacterised MFS-type transporter YbfB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001802 272.0
SYD1_k127_651334_7 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004252 247.0
SYD1_k127_651334_8 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.00000000000000000000000000000000000000000000000000000000000001405 231.0
SYD1_k127_651334_9 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000002529 206.0
SYD1_k127_6563653_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 513.0
SYD1_k127_6611811_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07239,K15726 - - 2.311e-210 668.0
SYD1_k127_6611811_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000001903 55.0
SYD1_k127_6622623_0 Elongator protein 3, MiaB family, Radical SAM - - - 1.17e-204 645.0
SYD1_k127_6622623_1 Domain of unknown function (DUF305) - - - 0.0000000000000000000000000000000003959 140.0
SYD1_k127_6653434_0 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 529.0
SYD1_k127_6653434_1 Mo-co oxidoreductase dimerisation domain K17225 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006543 462.0
SYD1_k127_669687_0 Peroxidase K03782 - 1.11.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 441.0
SYD1_k127_669687_1 Cytochrome B561 K12262 - - 0.0000000000000000000000000000000000003033 145.0
SYD1_k127_6712257_0 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 - 3.6.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 592.0
SYD1_k127_6712257_1 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 0.000000000000000000000000000000000000000000000000000000000000001063 226.0
SYD1_k127_6752942_0 Rhodanese Homology Domain - - - 0.000000000000000000008116 97.0
SYD1_k127_6752942_1 Pyrroloquinoline quinone biosynthesis protein E K06139,K06937 - - 0.00000000000000000002854 94.0
SYD1_k127_6759771_0 COG1613 ABC-type sulfate transport system, periplasmic component K02048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 497.0
SYD1_k127_6759771_1 Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system K02045 - 3.6.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 430.0
SYD1_k127_6759771_2 Transcriptional regulator K13635 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 423.0
SYD1_k127_6759771_3 sulfate ABC transporter K02047 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007781 399.0
SYD1_k127_6759771_4 PFAM binding-protein-dependent transport systems inner membrane component K02046 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000768 385.0
SYD1_k127_6759771_5 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01531,K12955 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0015399,GO:0015405,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0099131,GO:0099132 3.6.3.2 0.000000000000000000000000000000000000000000000000000002384 191.0
SYD1_k127_6777290_0 COG0845 Membrane-fusion protein K12542 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 372.0
SYD1_k127_6777290_1 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.000000000000001944 88.0
SYD1_k127_6832503_0 ABC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000001736 226.0
SYD1_k127_6832503_1 Tetratricopeptide repeat - - - 0.000000000000000000005414 96.0
SYD1_k127_68720_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1200.0
SYD1_k127_68720_1 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 0.0 1024.0
SYD1_k127_68720_10 gluconolactonase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005036 279.0
SYD1_k127_68720_11 Transcriptional regulator K07734 - - 0.0000000000000000000000000000000000000000000000000000000000000007658 227.0
SYD1_k127_68720_12 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.00000000000000000000000000000000000000000000000000000000000003825 220.0
SYD1_k127_68720_13 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03188 - - 0.000000000000000000000000000000000000000000000000000000000001223 219.0
SYD1_k127_68720_14 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.0000000000000000000000000000000000000000000000000000000000262 210.0
SYD1_k127_68720_15 Belongs to the urease gamma subunit family K01430 - 3.5.1.5 0.0000000000000000000000000000000000000000000000000372 179.0
SYD1_k127_68720_16 Belongs to the urease beta subunit family K01429 - 3.5.1.5 0.000000000000000000000000000000000000000000007654 165.0
SYD1_k127_68720_17 PFAM HupE UreJ protein K03192 - - 0.000000000000000000000000002056 118.0
SYD1_k127_68720_18 Biotin-lipoyl like - - - 0.000000000000000000000001833 111.0
SYD1_k127_68720_19 helix_turn_helix multiple antibiotic resistance protein K06075 - - 0.0000000000006652 74.0
SYD1_k127_68720_2 branched-chain amino acid K11959 - - 1.732e-235 732.0
SYD1_k127_68720_20 PFAM cytochrome c class I K08738 - - 0.00001955 52.0
SYD1_k127_68720_3 Belongs to the binding-protein-dependent transport system permease family K11960 - - 3.956e-198 632.0
SYD1_k127_68720_4 Belongs to the binding-protein-dependent transport system permease family K01998,K11961 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008685 599.0
SYD1_k127_68720_5 ABC-type transport system, ATPase component K11962 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 411.0
SYD1_k127_68720_6 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component K11963 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006679 386.0
SYD1_k127_68720_7 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007176 373.0
SYD1_k127_68720_8 Haemolysin-III related K11068 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 293.0
SYD1_k127_68720_9 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000258 285.0
SYD1_k127_6893616_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 390.0
SYD1_k127_6893616_1 Bacterial transglutaminase-like N-terminal region - - - 0.000000000000000000000000000000000000223 141.0
SYD1_k127_6902038_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 7.617e-205 644.0
SYD1_k127_6902038_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.00000000000000000000000000000000000000000000000000000000000008489 218.0
SYD1_k127_6902038_2 Protein of unknown function, DUF481 - - - 0.0000000000000000000000000000000000000000000000000000000125 211.0
SYD1_k127_6902038_3 Phosphoribosyl transferase domain K07101 - - 0.00000000000000000000000000000004087 131.0
SYD1_k127_6905159_0 PFAM Carbamoyl-phosphate synthase L chain, ATP binding domain, Biotin carboxylase C-terminal domain, Carbamoyl-phosphate synthase L chain, N-terminal domain K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 1.9e-255 791.0
SYD1_k127_6905159_1 RNB K01147 - 3.1.13.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 603.0
SYD1_k127_6905159_2 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 578.0
SYD1_k127_6905159_3 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000000001964 192.0
SYD1_k127_6905159_4 Uncharacterised protein family (UPF0227) K07000 - - 0.0000000000000000000000000000000000000000055 164.0
SYD1_k127_6905159_5 Redoxin domain protein - - - 0.00000000000000000000000000000000000000001781 158.0
SYD1_k127_6905159_6 mRNA catabolic process - - - 0.00000000000000000000000000000000009111 143.0
SYD1_k127_6905159_7 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 - 4.1.3.40 0.0000000000000000000006047 102.0
SYD1_k127_6905159_8 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000004393 96.0
SYD1_k127_6906466_0 Penicillin amidase - - - 2.512e-262 835.0
SYD1_k127_6906466_1 Bacterial periplasmic substrate-binding proteins K09969 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 429.0
SYD1_k127_6906466_10 PFAM CreA family protein K05805 - - 0.000000000000000000000000000000000000000000000000000000003559 203.0
SYD1_k127_6906466_11 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000505 205.0
SYD1_k127_6906466_12 Cytochrome b561 K12262 - - 0.000000000000000000000000000000000000000000000000009765 186.0
SYD1_k127_6906466_13 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000002411 153.0
SYD1_k127_6906466_14 transcriptional regulator - - - 0.00000000000000000000000000000000000002271 152.0
SYD1_k127_6906466_15 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000002567 139.0
SYD1_k127_6906466_16 DUF218 domain - - - 0.000000000000000000000000000000004216 139.0
SYD1_k127_6906466_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 350.0
SYD1_k127_6906466_3 PGAP1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003026 288.0
SYD1_k127_6906466_4 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K09971 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001721 276.0
SYD1_k127_6906466_5 Binding-protein-dependent transport system inner membrane component K09970 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003702 249.0
SYD1_k127_6906466_6 Thioesterase superfamily protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009314 242.0
SYD1_k127_6906466_7 YceI-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001081 228.0
SYD1_k127_6906466_8 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000001336 230.0
SYD1_k127_6906466_9 Steryl acetyl hydrolase K14731 - 3.1.1.83 0.0000000000000000000000000000000000000000000000000000000000000003012 230.0
SYD1_k127_6918012_0 Acetyl-coenzyme A synthetase N-terminus K01908 - 6.2.1.17 2.48e-231 724.0
SYD1_k127_6918012_1 PFAM Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000003023 116.0
SYD1_k127_6923840_0 Bacterial type II/III secretion system short domain K02453 - - 2.373e-204 661.0
SYD1_k127_6923840_1 type II secretion system protein E K02454 - - 4.76e-204 646.0
SYD1_k127_6923840_10 General Secretory Pathway K02463 - - 0.00000000000000000000000001158 119.0
SYD1_k127_6923840_11 Peptidase M15 - - - 0.0000000000000000000000001064 112.0
SYD1_k127_6923840_12 General secretion pathway protein I K02458 - - 0.00000000000000000002197 98.0
SYD1_k127_6923840_13 general secretion pathway protein K02459 - - 0.00000000000000679 84.0
SYD1_k127_6923840_14 Protein of unknown function (DUF3108) - - - 0.000000004719 66.0
SYD1_k127_6923840_15 general secretion pathway protein h K02457 - - 0.000001036 57.0
SYD1_k127_6923840_16 general secretion pathway protein K02452 - - 0.00000161 56.0
SYD1_k127_6923840_17 PFAM General secretion pathway, M protein K02462 - - 0.000002163 57.0
SYD1_k127_6923840_18 General secretion pathway protein L K02461 - - 0.0006904 51.0
SYD1_k127_6923840_2 carboxylase K01968 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 436.0
SYD1_k127_6923840_3 Hydroxymethylglutaryl-CoA lyase K01640 GO:0000287,GO:0003674,GO:0003824,GO:0004419,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005777,GO:0005782,GO:0005829,GO:0006082,GO:0006091,GO:0006520,GO:0006551,GO:0006552,GO:0006605,GO:0006625,GO:0006629,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009063,GO:0009081,GO:0009083,GO:0009987,GO:0015031,GO:0015833,GO:0016043,GO:0016054,GO:0016829,GO:0016830,GO:0016833,GO:0017144,GO:0019752,GO:0022607,GO:0030145,GO:0031907,GO:0031974,GO:0033036,GO:0033365,GO:0034613,GO:0042579,GO:0042802,GO:0042803,GO:0042886,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043574,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046395,GO:0046872,GO:0046907,GO:0046914,GO:0046950,GO:0046951,GO:0046983,GO:0051179,GO:0051234,GO:0051259,GO:0051262,GO:0051641,GO:0051649,GO:0065003,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072662,GO:0072663,GO:1901564,GO:1901565,GO:1901568,GO:1901570,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1902224 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 392.0
SYD1_k127_6923840_4 General secretion pathway protein F K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 390.0
SYD1_k127_6923840_5 Molybdopterin biosynthesis protein MoeB K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 326.0
SYD1_k127_6923840_6 general secretion pathway protein G K02456 - - 0.00000000000000000000000000000000000000000000000000000000000001526 220.0
SYD1_k127_6923840_7 Haloacid dehalogenase-like hydrolase K07025 - - 0.0000000000000000000000000000000000000000000001268 176.0
SYD1_k127_6923840_8 PFAM General secretion pathway protein K K02460 - - 0.00000000000000000000000000000000000000004514 168.0
SYD1_k127_6923840_9 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000002589 117.0
SYD1_k127_6924956_0 C-terminal, D2-small domain, of ClpB protein K11907 - - 0.0 1017.0
SYD1_k127_6924956_1 carboxylase K01969 - 6.4.1.4 1.357e-271 844.0
SYD1_k127_6924956_10 carboxylase K01968 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000006631 257.0
SYD1_k127_6924956_11 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000002415 253.0
SYD1_k127_6924956_12 Enoyl-CoA hydratase/isomerase K13766,K15312 - 4.2.1.18 0.0000000000000000000000000000000000000000000000000000000000000000003887 238.0
SYD1_k127_6924956_13 This family consists of several bacterial proteins of K11903 - - 0.0000000000000000000000000000000000000000000000000000000000000007956 222.0
SYD1_k127_6924956_14 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000000000000000000000000000000008161 221.0
SYD1_k127_6924956_15 Pfam:T6SS_VasB K11895 - - 0.0000000000000000000000000000000000000000000000000000000000004747 222.0
SYD1_k127_6924956_16 signal transduction protein - - - 0.0000000000000000000000000000000000000000000000000003005 195.0
SYD1_k127_6924956_17 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000006523 185.0
SYD1_k127_6924956_18 SMART Transport-associated and nodulation region - - - 0.00000000000000000000000000000000000000000000639 175.0
SYD1_k127_6924956_19 2-hydroxychromene-2-carboxylate isomerase - - - 0.000000000000000000000000000000000000000002611 162.0
SYD1_k127_6924956_2 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 - 2.7.11.5 2.793e-217 690.0
SYD1_k127_6924956_20 type VI secretion protein K11900 - - 0.00000000000000000000000000000000000005388 142.0
SYD1_k127_6924956_21 heat shock protein K04762 - - 0.000000000000000000000000000000000001808 143.0
SYD1_k127_6924956_22 Gene 25-like lysozyme K11897 - - 0.0000000000000000000000000000004334 130.0
SYD1_k127_6924956_23 Type VI secretion system effector, Hcp K11903 - - 0.000000000000000000000000003919 116.0
SYD1_k127_6924956_24 Belongs to the UPF0102 family K07460 - - 0.000000000000000000001441 101.0
SYD1_k127_6924956_25 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000006122 97.0
SYD1_k127_6924956_3 Acyl-CoA dehydrogenase, C-terminal domain K00253 - 1.3.8.4 1.712e-215 672.0
SYD1_k127_6924956_4 flavoprotein involved in K transport - - - 7.828e-215 677.0
SYD1_k127_6924956_5 Cobalamin synthesis protein cobW C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 459.0
SYD1_k127_6924956_6 Type VI secretion protein K11896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 470.0
SYD1_k127_6924956_7 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 317.0
SYD1_k127_6924956_8 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003703 291.0
SYD1_k127_6924956_9 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001217 282.0
SYD1_k127_6930139_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1009.0
SYD1_k127_6930139_1 DEAD DEAH box helicase K03724 - - 3.84e-311 976.0
SYD1_k127_6930139_10 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001188 248.0
SYD1_k127_6930139_11 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000000000000002551 225.0
SYD1_k127_6930139_12 PFAM metallophosphoesterase K06953 - - 0.000000000000000000000000000000000000000000000000000000002564 207.0
SYD1_k127_6930139_13 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.000000000000000000000000000000000000000000000000000002379 204.0
SYD1_k127_6930139_14 PFAM NUDIX hydrolase K08310 - 3.6.1.67 0.00000000000000000000000000000000000000000001672 167.0
SYD1_k127_6930139_15 Regulatory protein, FmdB family - - - 0.000000000000000000000000000000004703 129.0
SYD1_k127_6930139_16 PFAM DoxX family protein K15977 - - 0.00000000000000000000000000000004427 130.0
SYD1_k127_6930139_17 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000002259 98.0
SYD1_k127_6930139_18 - - - - 0.00000002141 57.0
SYD1_k127_6930139_2 DNA ligase N terminus K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 8.797e-206 664.0
SYD1_k127_6930139_3 Acyl-CoA dehydrogenase N terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007198 584.0
SYD1_k127_6930139_4 Exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000631 503.0
SYD1_k127_6930139_5 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 390.0
SYD1_k127_6930139_6 fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009013 368.0
SYD1_k127_6930139_7 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 347.0
SYD1_k127_6930139_8 Protein of unknown function (DUF429) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 291.0
SYD1_k127_6930139_9 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004043 255.0
SYD1_k127_69314_0 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000725 392.0
SYD1_k127_69314_1 PFAM Amidase K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 340.0
SYD1_k127_6934971_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 2.493e-257 807.0
SYD1_k127_6934971_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 1.514e-253 788.0
SYD1_k127_6934971_10 DNA polymerase K02337 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 372.0
SYD1_k127_6934971_11 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004059 377.0
SYD1_k127_6934971_12 Trypsin K08070 - 1.3.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 370.0
SYD1_k127_6934971_13 alpha/beta hydrolase fold K07019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008078 327.0
SYD1_k127_6934971_14 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009919 308.0
SYD1_k127_6934971_15 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 289.0
SYD1_k127_6934971_16 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 286.0
SYD1_k127_6934971_17 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002536 286.0
SYD1_k127_6934971_18 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00018 - 1.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006793 274.0
SYD1_k127_6934971_19 heptosyltransferase II K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003159 261.0
SYD1_k127_6934971_2 Belongs to the glutamate synthase family - - - 6.91e-219 692.0
SYD1_k127_6934971_20 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000007237 246.0
SYD1_k127_6934971_21 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006345 251.0
SYD1_k127_6934971_22 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000001186 243.0
SYD1_k127_6934971_23 ThiF family K22132 - - 0.0000000000000000000000000000000000000000000000000000000000000001055 231.0
SYD1_k127_6934971_24 flavodoxin nitric oxide synthase K03809 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000004415 219.0
SYD1_k127_6934971_25 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.0000000000000000000000000000000000000000000000000000000003429 206.0
SYD1_k127_6934971_26 Bacterial transcriptional repressor C-terminal K09017 - - 0.00000000000000000000000000000000000000000000000000004845 195.0
SYD1_k127_6934971_27 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000005315 188.0
SYD1_k127_6934971_28 ATPases associated with a variety of cellular activities K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000002898 181.0
SYD1_k127_6934971_29 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000001022 164.0
SYD1_k127_6934971_3 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 2.426e-205 649.0
SYD1_k127_6934971_30 Preprotein translocase subunit YajC K03210 - - 0.0000000000000000000000000000000000000003716 151.0
SYD1_k127_6934971_31 PAS fold - - - 0.00000000000000000000000000000000000003405 162.0
SYD1_k127_6934971_32 Domain of unknown function (DUF4440) - - - 0.00000000000000000000000000000000000008932 146.0
SYD1_k127_6934971_33 Protein of unknown function (DUF2946) - - - 0.00000000000000000000000000000000002216 142.0
SYD1_k127_6934971_34 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000000000000000000000002289 117.0
SYD1_k127_6934971_35 Zinc-finger domain - - - 0.00000000000000000000189 95.0
SYD1_k127_6934971_36 Flagellar protein YcgR - - - 0.0000000000000000002646 99.0
SYD1_k127_6934971_37 Site-specific recombinase, DNA invertase Pin - - - 0.00001383 49.0
SYD1_k127_6934971_38 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.0001992 49.0
SYD1_k127_6934971_4 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003395 569.0
SYD1_k127_6934971_5 Alanine dehydrogenase/PNT, C-terminal domain K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004444 544.0
SYD1_k127_6934971_6 Belongs to the DEAD box helicase family K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 541.0
SYD1_k127_6934971_7 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004546 516.0
SYD1_k127_6934971_8 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 405.0
SYD1_k127_6934971_9 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 379.0
SYD1_k127_6967227_0 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001284 282.0
SYD1_k127_6967227_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000001326 176.0
SYD1_k127_6967227_2 - - - - 0.00000000000000000000000000000000000001187 150.0
SYD1_k127_6973951_0 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family K00219 - 1.3.1.34 3.91e-282 884.0
SYD1_k127_6973951_1 Putative nucleotidyltransferase substrate binding domain K07182 - - 2.406e-206 660.0
SYD1_k127_6973951_10 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000001901 113.0
SYD1_k127_6973951_11 TIGRFAM type I secretion outer membrane protein, TolC family K12543 - - 0.0000695 46.0
SYD1_k127_6973951_2 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 549.0
SYD1_k127_6973951_3 RmuC family K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 466.0
SYD1_k127_6973951_4 Iron-containing alcohol dehydrogenase K00001 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007366 402.0
SYD1_k127_6973951_5 Exonuclease K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000003682 196.0
SYD1_k127_6973951_6 Thioesterase K07107 - - 0.0000000000000000000000000000000000000000000000000002233 188.0
SYD1_k127_6973951_7 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000000000000000000000000000005157 179.0
SYD1_k127_6973951_8 PFAM globin K06886 - - 0.0000000000000000000000000000000000000002116 156.0
SYD1_k127_6973951_9 COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D K01424 - 3.5.1.1 0.000000000000000000000000000006431 133.0
SYD1_k127_6988093_0 Glycosyl transferase family group 2 - - - 0.0 1096.0
SYD1_k127_6988093_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000001327 137.0
SYD1_k127_6988093_2 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 K01802 - 5.2.1.8 0.0000000000000000000000000000007053 128.0
SYD1_k127_6988093_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.00000000000000000000000000008061 128.0
SYD1_k127_6993066_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 8.759e-295 912.0
SYD1_k127_6993066_1 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 379.0
SYD1_k127_6993066_2 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000000000000003635 245.0
SYD1_k127_6993066_3 pfkB family carbohydrate kinase K03272,K21344 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000009368 177.0
SYD1_k127_6993066_4 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.00000000000000000000000000000000000004988 144.0
SYD1_k127_6993066_5 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000001036 75.0
SYD1_k127_6993066_6 Lipopolysaccharide assembly protein A domain K08992 - - 0.00001308 52.0
SYD1_k127_6994730_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1791.0
SYD1_k127_6994730_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 366.0
SYD1_k127_6994730_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 320.0
SYD1_k127_6994730_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002423 266.0
SYD1_k127_6994730_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002186 259.0
SYD1_k127_6994730_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000000002417 181.0
SYD1_k127_6994730_6 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000000000000000000000000000002532 131.0
SYD1_k127_6994730_7 translation elongation factor activity K02358 - - 0.000000000000004425 74.0
SYD1_k127_7022750_0 Belongs to the SOS response-associated peptidase family - - - 0.00000000000000000000000000000000000000000000000000001554 197.0
SYD1_k127_7022750_1 Domain of unknown function (DUF4149) - - - 0.000000000000000000000000000000000000000000008542 168.0
SYD1_k127_7022750_2 Oxidoreductase - - - 0.00000000000000000000000000003432 118.0
SYD1_k127_7039650_0 dehydrogenase, E1 component K00164 - 1.2.4.2 0.0 1444.0
SYD1_k127_7039650_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.968e-244 759.0
SYD1_k127_7039650_2 SdhA B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC D which are the membrane components and form cytochrome b556 K00240 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0022900,GO:0022904,GO:0044237,GO:0044464,GO:0045333,GO:0048037,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0071944 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000329 459.0
SYD1_k127_7039650_3 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 GO:0000104,GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 324.0
SYD1_k127_7039650_4 Flavinator of succinate dehydrogenase K09159 - - 0.00000000000000000000000001626 110.0
SYD1_k127_7070048_0 Cation efflux family K16264 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 415.0
SYD1_k127_7070048_1 Repeat of Unknown Function (DUF347) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008537 341.0
SYD1_k127_7070048_2 Repeat of Unknown Function (DUF347) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 332.0
SYD1_k127_7070048_3 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001513 247.0
SYD1_k127_7070048_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000006172 222.0
SYD1_k127_7070048_5 Regulatory protein ArsR K03892 - - 0.00000000000000000001124 94.0
SYD1_k127_7070048_6 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000000000001001 83.0
SYD1_k127_7087918_0 Putative exonuclease, RdgC K03554 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 342.0
SYD1_k127_7087918_1 Belongs to the amidase family K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000006559 244.0
SYD1_k127_7087918_2 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01895 - 6.2.1.1 0.000000000000000000000003774 103.0
SYD1_k127_7099092_0 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005051 422.0
SYD1_k127_7099092_1 histone deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004879 316.0
SYD1_k127_7099092_2 lytic murein transglycosylase B K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004493 297.0
SYD1_k127_7099092_3 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 GO:0000003,GO:0000096,GO:0000097,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005777,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0007568,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009507,GO:0009532,GO:0009536,GO:0009566,GO:0009567,GO:0009570,GO:0009653,GO:0009826,GO:0009856,GO:0009860,GO:0009932,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016043,GO:0016049,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0019953,GO:0022414,GO:0030154,GO:0030170,GO:0031090,GO:0032501,GO:0032502,GO:0032989,GO:0036094,GO:0040007,GO:0042221,GO:0042579,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0046394,GO:0046686,GO:0048037,GO:0048046,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050662,GO:0050896,GO:0051704,GO:0060560,GO:0070279,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.00000000000000001236 82.0
SYD1_k127_7111294_0 PFAM RDD domain containing protein - - - 0.0000000000000000000000000000000000009348 147.0
SYD1_k127_7111294_1 Pfam Aminotransferase class I and II K02225 - - 0.00000000000000000000000004737 116.0
SYD1_k127_7111294_2 Protein of unknown function (DUF3106) - - - 0.000000000000003535 83.0
SYD1_k127_7111294_3 Protein of unknown function (DUF3619) - - - 0.000002892 55.0
SYD1_k127_7113945_0 outer membrane autotransporter K12686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002982 279.0
SYD1_k127_7113945_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000001263 91.0
SYD1_k127_7113945_2 Phospholipase lecithinase hemolysin - - - 0.000005695 58.0
SYD1_k127_7124556_0 mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth K15738 - - 8.284e-210 669.0
SYD1_k127_7124556_1 phospholipase K01058 - 3.1.1.32,3.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 388.0
SYD1_k127_7124556_2 regulatory protein (MerR) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 311.0
SYD1_k127_7124556_3 NUDIX domain - - - 0.000000000000000000000000000000000768 141.0
SYD1_k127_7162095_0 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.00000000000000000000000000000000000000000000000000000000000000000000000009625 256.0
SYD1_k127_7162095_1 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 0.000000000000000000000000000000000000000000001035 178.0
SYD1_k127_7162095_2 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000007998 128.0
SYD1_k127_7174403_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1425.0
SYD1_k127_7174403_1 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007168 391.0
SYD1_k127_7179230_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005115 287.0
SYD1_k127_7179230_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000003905 229.0
SYD1_k127_7179230_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000008083 169.0
SYD1_k127_7179230_3 PFAM cyclic nucleotide-binding K07001 - - 0.00000000000000000000000000000000001187 151.0
SYD1_k127_7219067_0 ABC-type multidrug transport system, ATPase and permease K06147 - - 3.601e-195 624.0
SYD1_k127_7219067_1 RimK-like ATP-grasp domain K03802 - 6.3.2.29,6.3.2.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 359.0
SYD1_k127_7229292_0 Predicted metal-dependent hydrolase K07044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007293 293.0
SYD1_k127_7229292_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000005114 175.0
SYD1_k127_7229292_2 COGs COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.0000000000000000000002899 113.0
SYD1_k127_7229292_3 Phosphoesterase family - - - 0.00000000000000000002134 91.0
SYD1_k127_7240485_0 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 461.0
SYD1_k127_7240485_1 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003006 415.0
SYD1_k127_7240485_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006732 402.0
SYD1_k127_7240485_3 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005376 395.0
SYD1_k127_7240485_4 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005474 334.0
SYD1_k127_7240485_5 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 297.0
SYD1_k127_7240485_6 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 285.0
SYD1_k127_7240485_7 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000002601 125.0
SYD1_k127_7264187_0 Transglutaminase-like superfamily - - - 7.927e-209 655.0
SYD1_k127_7264187_1 A predicted alpha-helical domain with a conserved ER motif. - - - 3.068e-202 655.0
SYD1_k127_7269862_0 Polysaccharide biosynthesis protein CapD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 599.0
SYD1_k127_7269862_1 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 543.0
SYD1_k127_7269862_2 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002391 269.0
SYD1_k127_7269862_3 Sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002586 254.0
SYD1_k127_7269862_4 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001281 252.0
SYD1_k127_7269862_5 acetyltransferase - - - 0.00000000000000000000000000000000005305 143.0
SYD1_k127_7269862_6 O-Antigen ligase - - - 0.000000007211 60.0
SYD1_k127_7292425_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.191e-276 859.0
SYD1_k127_7292425_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.0000000000000000000000000000000000000000000000000000000000000000000000001345 248.0
SYD1_k127_7292425_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000001118 213.0
SYD1_k127_7304262_0 PQQ-like domain K00114 - 1.1.2.8 6.194e-310 956.0
SYD1_k127_7304262_1 Aldehyde dehydrogenase family K00138 - - 6.285e-284 878.0
SYD1_k127_7304262_2 Protein of unknown function (DUF779) K09959 - - 0.000000000000000000000000000000000000000000000000003656 184.0
SYD1_k127_7304262_3 PBP superfamily domain K07219 - - 0.00000000000000000000000000000000000000006499 165.0
SYD1_k127_7304262_4 PaaX-like protein C-terminal domain K02616 - - 0.00001476 48.0
SYD1_k127_7311169_0 type IVB pilus formation outer membrane protein, R64 PilN family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009051 353.0
SYD1_k127_7311169_1 Type II/IV secretion system protein - - - 0.000000000000000000000000000000000000000000566 170.0
SYD1_k127_7311169_2 Pilin accessory protein (PilO) - - - 0.000000000000004025 88.0
SYD1_k127_7325474_0 Histidine kinase - - - 0.000000000000000000000000000000000001954 143.0
SYD1_k127_7325474_1 chemotaxis, protein K03406 - - 0.00000000000000000000000000000000003673 146.0
SYD1_k127_7342458_0 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K05796 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 310.0
SYD1_k127_7342458_1 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000001612 50.0
SYD1_k127_7347166_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1112.0
SYD1_k127_7347166_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 1.24e-322 998.0
SYD1_k127_7347166_10 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007078 499.0
SYD1_k127_7347166_11 Belongs to the UPF0246 family K09861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008464 331.0
SYD1_k127_7347166_12 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 327.0
SYD1_k127_7347166_13 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 316.0
SYD1_k127_7347166_14 Zn-dependent protease with chaperone function - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495 316.0
SYD1_k127_7347166_15 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007329 297.0
SYD1_k127_7347166_16 Inhibitor of apoptosis-promoting Bax1 K19416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001406 263.0
SYD1_k127_7347166_17 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001427 273.0
SYD1_k127_7347166_18 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000001009 252.0
SYD1_k127_7347166_19 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000000003487 242.0
SYD1_k127_7347166_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 6.532e-246 765.0
SYD1_k127_7347166_20 FAD dependent oxidoreductase K06955 - - 0.000000000000000000000000000000000000000000000000000000000000000002517 239.0
SYD1_k127_7347166_21 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000004203 227.0
SYD1_k127_7347166_22 peptidase K06194 - - 0.000000000000000000000000000000000000000000000000000000000000001103 228.0
SYD1_k127_7347166_23 Nucleoside H+ symporter K05820 - - 0.00000000000000000000000000000000000000000000000000000000005025 219.0
SYD1_k127_7347166_24 CBS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000002811 201.0
SYD1_k127_7347166_25 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K13053,K14160 - - 0.00000000000000000000000000000000000000000000002317 179.0
SYD1_k127_7347166_26 Tetratricopeptide repeat-like domain - - - 0.000000000000000000000000000000000000000001818 164.0
SYD1_k127_7347166_27 Protein of unknown function (DUF962) - - - 0.000000000000000000000000000000000000000002667 157.0
SYD1_k127_7347166_28 LysM domain K08086 - - 0.0000000000000000000000000000000000000000115 172.0
SYD1_k127_7347166_29 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000001419 131.0
SYD1_k127_7347166_3 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 6.604e-196 619.0
SYD1_k127_7347166_30 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.00000000000000000000000001593 117.0
SYD1_k127_7347166_31 Domain of unknown function (DUF4115) K15539 - - 0.0000000000000000000000000548 121.0
SYD1_k127_7347166_32 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.000000000000000000009792 106.0
SYD1_k127_7347166_33 Domain of unknown function (DUF4440) - - - 0.000000000000000006112 93.0
SYD1_k127_7347166_34 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000008282 93.0
SYD1_k127_7347166_35 Entericidin EcnA/B family - - - 0.00001098 48.0
SYD1_k127_7347166_4 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009347 608.0
SYD1_k127_7347166_5 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009375 606.0
SYD1_k127_7347166_6 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 582.0
SYD1_k127_7347166_7 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 584.0
SYD1_k127_7347166_8 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003348 538.0
SYD1_k127_7347166_9 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 537.0
SYD1_k127_7372287_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 5.342e-308 961.0
SYD1_k127_7372287_1 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000001018 223.0
SYD1_k127_7408196_1 - - - - 0.0000000000000002991 86.0
SYD1_k127_7408196_2 - - - - 0.000000000008611 77.0
SYD1_k127_7414033_0 Serine threonine protein phosphatase K01090,K20074 - 3.1.3.16 2.572e-216 686.0
SYD1_k127_7414033_1 OsmC-like protein - - - 0.000000000000000000000000000000000000000000001669 168.0
SYD1_k127_7414033_2 COG2116 Formate nitrite family of transporters K06212,K21993 - - 0.0000000000000000000000000000179 117.0
SYD1_k127_7422629_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01929,K15792 - 6.3.2.10,6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008267 361.0
SYD1_k127_74237_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 4.233e-210 657.0
SYD1_k127_74237_1 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 449.0
SYD1_k127_74237_2 transcriptional K03719 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000462 257.0
SYD1_k127_74237_3 redox protein, regulator of disulfide bond formation - - - 0.0000000000000000000000000000000000000000000000000000000000008535 213.0
SYD1_k127_74237_4 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000003961 176.0
SYD1_k127_74237_5 Transcriptional regulator - - - 0.0000000000000000000000000000000000000002254 153.0
SYD1_k127_7428704_0 Glycine-zipper domain - - - 0.0000000000000000000000000000000002383 138.0
SYD1_k127_7428704_1 - - - - 0.0000000000001949 71.0
SYD1_k127_7428704_2 CHASE3 domain K03406 - - 0.000000000005438 77.0
SYD1_k127_7447423_0 Formate/nitrite transporter K06212,K21993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008478 432.0
SYD1_k127_7447423_1 ROK family K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008147 329.0
SYD1_k127_7447423_2 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.00000000000000000000000000000000000000002247 159.0
SYD1_k127_7447423_3 Mo-co oxidoreductase dimerisation domain K17225 - - 0.00000000000000000000000000000466 120.0
SYD1_k127_7474328_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 3.542e-197 623.0
SYD1_k127_7474328_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005537 366.0
SYD1_k127_7474328_2 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 328.0
SYD1_k127_7474328_3 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000006582 137.0
SYD1_k127_7474328_4 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000004462 90.0
SYD1_k127_7480625_0 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006109 322.0
SYD1_k127_7480625_1 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002942 252.0
SYD1_k127_7480625_2 S4 RNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000001069 211.0
SYD1_k127_7480625_3 Uncharacterized protein conserved in bacteria (DUF2331) - - - 0.00000000000000000000000000000000000006461 155.0
SYD1_k127_7480625_4 Diguanylate cyclase - - - 0.00005131 46.0
SYD1_k127_7481493_0 PFAM GTP-binding signal recognition particle SRP54 G- domain K02404 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006531 328.0
SYD1_k127_7481493_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.000000000000000000000000000000000000000000000000000000000001409 215.0
SYD1_k127_7481493_2 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.00000000000000000004646 91.0
SYD1_k127_7481493_3 Belongs to the ParA family K04562 - - 0.00000004051 63.0
SYD1_k127_7524789_0 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005067 523.0
SYD1_k127_7524789_1 FAD binding domain K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002332 259.0
SYD1_k127_7524789_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000002532 251.0
SYD1_k127_7524789_3 PFAM NUDIX hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002047 244.0
SYD1_k127_7524789_4 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000002365 68.0
SYD1_k127_7524789_5 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.00000001246 66.0
SYD1_k127_7545959_0 Fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 458.0
SYD1_k127_7545959_1 Fatty acid desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 404.0
SYD1_k127_7545959_2 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001198 249.0
SYD1_k127_7545959_3 Protein of unknown function (DUF4197) - - - 0.0000000000000000000000000000000000000000000000000000000000001127 221.0
SYD1_k127_7545959_5 - - - - 0.0000000000000000001776 91.0
SYD1_k127_7571819_0 Acyltransferase ws dgat mgat K00635 - 2.3.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 307.0
SYD1_k127_7571819_1 PAP2 superfamily K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000131 198.0
SYD1_k127_7571819_2 Major Facilitator Superfamily - - - 0.000001171 51.0
SYD1_k127_7572481_0 Mycolic acid cyclopropane synthetase K00574 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008168,GO:0008610,GO:0008757,GO:0009058,GO:0009059,GO:0009273,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0030312,GO:0032259,GO:0032787,GO:0034645,GO:0042546,GO:0043170,GO:0043436,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070589,GO:0071554,GO:0071704,GO:0071766,GO:0071767,GO:0071768,GO:0071840,GO:0071944,GO:0072330,GO:1901576 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 457.0
SYD1_k127_7572481_1 MFS/sugar transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004514 280.0
SYD1_k127_7572481_2 Protein of unknown function (DUF3833) - - - 0.0000000000000000000000000000000000000000000000000000000000000000007016 232.0
SYD1_k127_7572481_3 Protein of unknown function (DUF1365) K09701 - - 0.0000000000000000000000000000000000000000000001495 180.0
SYD1_k127_7572481_4 Flavin containing amine oxidoreductase K06954 - - 0.000000000000000000000000000001047 124.0
SYD1_k127_7572481_5 Chalcone isomerase-like - - - 0.00000000000000000000000000004626 125.0
SYD1_k127_7572481_6 Dehydrogenase - - - 0.000000000000009297 77.0
SYD1_k127_7644210_0 COG0655 Multimeric flavodoxin WrbA - - - 0.000000000000000000000000000000000000000000000000000000000000000002849 229.0
SYD1_k127_7644210_1 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.0000000000000000009032 90.0
SYD1_k127_7644210_2 PFAM Filamentation induced by cAMP death on - - - 0.000000000000004927 75.0
SYD1_k127_7647595_0 Pfam:HipA_N K07154 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000009827 228.0
SYD1_k127_7647595_1 HipA domain protein K07154 - 2.7.11.1 0.00000000000000000000000000000006841 128.0
SYD1_k127_7650559_0 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006111 550.0
SYD1_k127_7677591_0 PFAM polysaccharide export protein K01991 - - 0.000000000000000000000000000000000000000000000000000001039 198.0
SYD1_k127_7677591_1 protein involved in exopolysaccharide biosynthesis K16692 GO:0000271,GO:0003674,GO:0003824,GO:0004672,GO:0004713,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0005975,GO:0005976,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016020,GO:0016021,GO:0016051,GO:0016301,GO:0016310,GO:0016462,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0018108,GO:0018193,GO:0018212,GO:0019538,GO:0031224,GO:0031226,GO:0033692,GO:0034637,GO:0034645,GO:0036211,GO:0038083,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046377,GO:0046777,GO:0071704,GO:0071944,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 - 0.00000000000000000000000000000000000000003844 161.0
SYD1_k127_7708488_0 Arylsulfatase - - - 1.449e-312 975.0
SYD1_k127_7708488_1 MMPL family K07003 - - 9.821e-295 924.0
SYD1_k127_7708488_2 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007636 290.0
SYD1_k127_7708488_3 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 290.0
SYD1_k127_7739573_0 PFAM AMP-dependent synthetase and ligase K20034 - 6.2.1.44 6.784e-270 839.0
SYD1_k127_7739573_1 Protein of unknown function (DUF1302) - - - 4.92e-238 749.0
SYD1_k127_7739573_10 beta-keto acid cleavage enzyme - - - 0.00000000000000000000000000000001802 127.0
SYD1_k127_7739573_2 MMPL family K07003 - - 6.259e-233 734.0
SYD1_k127_7739573_3 Protein of unknown function (DUF1329) - - - 5.57e-212 667.0
SYD1_k127_7739573_4 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 542.0
SYD1_k127_7739573_5 alcohol dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004958 516.0
SYD1_k127_7739573_6 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 465.0
SYD1_k127_7739573_7 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000000000000000000000000000000001464 234.0
SYD1_k127_7739573_8 esterase of the alpha beta hydrolase fold K07002 - - 0.0000000000000000000000000000000000000000000002785 176.0
SYD1_k127_7739573_9 Carboxymuconolactone decarboxylase family - - - 0.000000000000000000000000000000000000000000451 163.0
SYD1_k127_7763128_0 phosphatase (DUF442) - - - 0.0000000000000000000000000000000000000000002206 163.0
SYD1_k127_7763128_1 Protein of unknown function (DUF1304) K08987 - - 0.0000000000000000000000000000000000000001551 152.0
SYD1_k127_7763128_2 Protein of unknown function (DUF3465) - - - 0.0000000000000000000000000000000000000003788 149.0
SYD1_k127_7763128_3 Domain of unknown function (DUF296) K06934 - - 0.000000000000000000000000000000000000004341 150.0
SYD1_k127_7784190_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007096 545.0
SYD1_k127_7784190_1 Cobalamin-independent synthase, Catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005553 521.0
SYD1_k127_7784190_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11745,K11747 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006885,GO:0008150,GO:0008324,GO:0009636,GO:0009987,GO:0010033,GO:0015075,GO:0015077,GO:0015079,GO:0015291,GO:0015318,GO:0015503,GO:0015643,GO:0015672,GO:0016020,GO:0016021,GO:0019899,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042592,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0048878,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051595,GO:0055067,GO:0055080,GO:0055085,GO:0065007,GO:0065008,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:1901654,GO:1901700 - 0.00000000000000000000000000000000000000000000000000000002201 204.0
SYD1_k127_7791636_0 Allophanate hydrolase subunit 2 - - - 0.0000000000000000000000000000000000000000000000000000000001528 214.0
SYD1_k127_7791636_1 Belongs to the UPF0271 (lamB) family K07160 - - 0.0000000000000000000000000000000000000000000000000000002149 203.0
SYD1_k127_7791636_2 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000003986 97.0
SYD1_k127_781324_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009886 570.0
SYD1_k127_781324_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 463.0
SYD1_k127_781324_2 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 403.0
SYD1_k127_781324_3 TIGRFAM chorismate mutase domain of proteobacterial P-protein, clade 2 K01713,K14170 - 4.2.1.51,4.2.1.91,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 400.0
SYD1_k127_781324_4 PFAM Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000329 219.0
SYD1_k127_781324_5 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0000000000000000004065 87.0
SYD1_k127_787095_0 Cysteine-rich domain - - - 1.303e-223 700.0
SYD1_k127_787095_1 ammonium transporter K03320 - - 2.001e-196 623.0
SYD1_k127_787095_10 Bacterial protein of unknown function (Gcw_chp) - - - 0.00000000000000000000000000001172 128.0
SYD1_k127_787095_11 Domain of unknown function (DUF4394) - - - 0.0000000000000000000000000002316 120.0
SYD1_k127_787095_12 - - - - 0.0000000000000009291 84.0
SYD1_k127_787095_13 Domain of unknown function (DUF1840) - - - 0.000000000000199 74.0
SYD1_k127_787095_14 protein conserved in bacteria K09806 - - 0.000001267 53.0
SYD1_k127_787095_2 glutamate--cysteine ligase K01919 - 6.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000366 470.0
SYD1_k127_787095_3 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 456.0
SYD1_k127_787095_4 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004808 315.0
SYD1_k127_787095_5 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001394 266.0
SYD1_k127_787095_6 Protein of unknown function (DUF3501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003966 245.0
SYD1_k127_787095_7 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.000000000000000000000000000000000000000000000000000000000000004463 224.0
SYD1_k127_787095_8 Protein of unknown function (DUF962) - - - 0.0000000000000000000000000000000000000000000000000000000000002026 216.0
SYD1_k127_787095_9 Belongs to the P(II) protein family K04752 - - 0.00000000000000000000000000000000000000000000000000000002585 199.0
SYD1_k127_7927008_0 Acetamidase/Formamidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009292 431.0
SYD1_k127_7927008_1 Belongs to the bacterial solute-binding protein 9 family K02077,K09815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005708 293.0
SYD1_k127_796215_0 COG0524 Sugar kinases, ribokinase family K00856 - 2.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007209 269.0
SYD1_k127_796215_1 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002754 262.0
SYD1_k127_796215_2 zinc-ribbon domain - - - 0.0000000000000009033 88.0
SYD1_k127_7976619_0 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15576 - - 1.546e-241 752.0
SYD1_k127_7976619_1 ABC-type nitrate sulfonate bicarbonate transport system, permease component K15577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 286.0
SYD1_k127_7976619_2 response regulator K07183 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004786 244.0
SYD1_k127_7976619_3 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K22067 - - 0.00000000000000000000000000000000000000000000000000000002712 210.0
SYD1_k127_7996018_0 AcrB/AcrD/AcrF family K18138 - - 0.0 1345.0
SYD1_k127_7996018_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 404.0
SYD1_k127_7996018_2 RND efflux system, outer membrane lipoprotein K18139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 380.0
SYD1_k127_7996018_3 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.000000000000000000000000000000000000000000000006345 177.0
SYD1_k127_7996018_4 - - - - 0.00000000000000002337 90.0
SYD1_k127_802649_0 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.000000000000000533 89.0
SYD1_k127_802649_1 Glycosyl transferase family group 2 - - - 0.0007647 44.0
SYD1_k127_8027463_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000915 434.0
SYD1_k127_8027463_1 Integral membrane protein CcmA involved in cell shape determination - - - 0.000003942 55.0
SYD1_k127_8027463_2 - - - - 0.00001369 49.0
SYD1_k127_805018_0 protein conserved in bacteria K09800 - - 0.000000000000000000000000000000000000002116 153.0
SYD1_k127_8089023_0 PFAM transposase, IS4 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004928 413.0
SYD1_k127_8089023_1 PFAM von Willebrand factor type A K01337 - 3.4.21.50 0.0000007005 54.0
SYD1_k127_8107057_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 1.254e-292 927.0
SYD1_k127_8107057_1 Major Facilitator Superfamily K03446 - - 1.018e-217 686.0
SYD1_k127_8107057_2 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 379.0
SYD1_k127_8107057_3 formate dehydrogenase K00127 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 353.0
SYD1_k127_8107057_4 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 308.0
SYD1_k127_8107057_5 4Fe-4S ferredoxin, iron-sulfur binding K00124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 280.0
SYD1_k127_8107057_6 HAD-superfamily hydrolase K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000006497 246.0
SYD1_k127_8107057_7 Transcriptional regulator, MarR K06075 - - 0.00000000000000000000000000000000001602 139.0
SYD1_k127_8107057_8 rieske 2fe-2s - - - 0.00000000000000000000000000000000003095 138.0
SYD1_k127_8107057_9 - - - - 0.00000008713 57.0
SYD1_k127_8112044_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 464.0
SYD1_k127_8112044_1 Transcriptional regulator, LysR family K03576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004807 367.0
SYD1_k127_8112044_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005761 323.0
SYD1_k127_8112044_3 COG1960 Acyl-CoA dehydrogenases K00255 - 1.3.8.8 0.00000000000000000000000000000000000000000002395 164.0
SYD1_k127_8129215_0 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001591 280.0
SYD1_k127_8129215_1 Methyltransferase K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000001114 173.0
SYD1_k127_8129215_2 Ferredoxin - - - 0.0000000000000000000000000000000000000006069 152.0
SYD1_k127_8129215_3 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000004565 124.0
SYD1_k127_8129215_4 Peptidase M16 K07263 - - 0.0000000000000000000000000000009434 123.0
SYD1_k127_8131075_0 nitrite sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein K00362,K05297 - 1.18.1.1,1.7.1.15 1.29e-315 973.0
SYD1_k127_8131075_1 Molybdopterin oxidoreductase Fe4S4 domain K00372 - - 2.084e-306 967.0
SYD1_k127_8131075_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005976 514.0
SYD1_k127_8131075_3 fumarate reductase succinate dehydrogenase flavoprotein domain protein K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 459.0
SYD1_k127_8131075_4 PFAM Glycosyl transferase, family K00766 - 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000005298 216.0
SYD1_k127_8131075_5 TIGRFAM nitrite reductase NAD(P)H , small subunit K00363 - 1.7.1.15 0.00000000000000000000000000000000000000000000008442 171.0
SYD1_k127_8131075_6 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000004114 167.0
SYD1_k127_8131075_7 Ribosomal protein S21 K02970 - - 0.000000000000000000000000000000006952 128.0
SYD1_k127_8135492_0 Beta-ketoacyl synthase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 572.0
SYD1_k127_8135492_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009077 519.0
SYD1_k127_8135492_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 460.0
SYD1_k127_8135492_3 Coenzyme A transferase K01031 - 2.8.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007773 364.0
SYD1_k127_8135492_4 Coenzyme A transferase K01032 - 2.8.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 347.0
SYD1_k127_8135492_5 alcohol dehydrogenase K00217 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016627,GO:0016628,GO:0018506,GO:0055114 1.3.1.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 303.0
SYD1_k127_8135492_6 TIGRFAM beta-ketoadipate pathway transcriptional regulators, PcaR PcaU PobR family K02624 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003907 280.0
SYD1_k127_8135492_7 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000001836 135.0
SYD1_k127_8135492_8 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.0000000000000000418 85.0
SYD1_k127_8135492_9 Cytochrome B561 K12262 - - 0.0002152 45.0
SYD1_k127_8148522_0 TonB-dependent Receptor Plug K02014 - - 4.427e-243 773.0
SYD1_k127_8148522_1 PFAM sulfatase K03760 - 2.7.8.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 574.0
SYD1_k127_8148522_10 - - - - 0.000000008468 60.0
SYD1_k127_8148522_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 359.0
SYD1_k127_8148522_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 289.0
SYD1_k127_8148522_4 PFAM Response regulator receiver domain K07689 - - 0.000000000000000000000000000000000000000008812 161.0
SYD1_k127_8148522_5 - - - - 0.000000000000000000000000000000000000000009528 160.0
SYD1_k127_8148522_6 MotA/TolQ/ExbB proton channel family - - - 0.00000000000000000000000000000000000000001075 162.0
SYD1_k127_8148522_7 - - - - 0.0000000000000000000000000000000006853 137.0
SYD1_k127_8148522_8 Histidine kinase K07675 - 2.7.13.3 0.00000000000000000000001158 114.0
SYD1_k127_8148522_9 ThiS family - - - 0.00000000000000000002988 95.0
SYD1_k127_8153706_0 Belongs to the DEAD box helicase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089 462.0
SYD1_k127_8173755_0 Cytochrome c - - - 0.0 1139.0
SYD1_k127_8173755_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 591.0
SYD1_k127_8173755_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 320.0
SYD1_k127_8173755_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 316.0
SYD1_k127_8173755_4 MAPEG family - - - 0.000000000000000000000000000000003408 133.0
SYD1_k127_8182861_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1275.0
SYD1_k127_8182861_1 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000000000000004073 123.0
SYD1_k127_8182861_2 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000001289 118.0
SYD1_k127_8182861_3 PIN domain - - - 0.00000000004822 71.0
SYD1_k127_8183719_0 AcrB/AcrD/AcrF family K03296 - - 1.428e-253 805.0
SYD1_k127_8183719_1 TIGRFAM type I secretion outer membrane protein, TolC family K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004442 307.0
SYD1_k127_8183719_2 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000001984 201.0
SYD1_k127_8183719_3 transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000001992 150.0
SYD1_k127_8183719_4 rhodanese-related sulfurtransferase - - - 0.00000000000000000000000000000002829 128.0
SYD1_k127_8185150_0 PFAM FAD dependent oxidoreductase K07137 - - 6.351e-276 856.0
SYD1_k127_8185150_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 3.681e-221 694.0
SYD1_k127_8185150_10 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.00000000000000000000000000000000000000000000001361 177.0
SYD1_k127_8185150_2 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 605.0
SYD1_k127_8185150_3 Alkyl hydroperoxide reductase K03387 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 583.0
SYD1_k127_8185150_4 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 582.0
SYD1_k127_8185150_5 flavoprotein, PP_4765 family K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 522.0
SYD1_k127_8185150_6 PFAM Pyruvate carboxyltransferase K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 409.0
SYD1_k127_8185150_7 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 319.0
SYD1_k127_8185150_8 Redoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000811 302.0
SYD1_k127_8185150_9 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 297.0
SYD1_k127_8205324_0 Putative phosphatase (DUF442) K17218 - 1.8.5.4 8.153e-203 644.0
SYD1_k127_8205324_1 Sigma-54 interaction domain K06714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 542.0
SYD1_k127_8205324_2 cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006409 432.0
SYD1_k127_8205324_3 PFAM beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 406.0
SYD1_k127_8205324_4 Fatty acid desaturase K00496 - 1.14.15.3 0.00000000000000000000000000000000000000000000000000000000000000003196 225.0
SYD1_k127_8205324_5 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 0.00000000000000000000000000000692 122.0
SYD1_k127_82059_0 Belongs to the DegT DnrJ EryC1 family K02805 - 2.6.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005526 581.0
SYD1_k127_82059_1 NAD(P)H-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008409 570.0
SYD1_k127_82059_2 Fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009747 559.0
SYD1_k127_82059_3 Glycosyltransferase like family 2 K10012 - 2.4.2.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 504.0
SYD1_k127_82059_4 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006605 427.0
SYD1_k127_82059_5 Formyl transferase, C-terminal domain K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009176 342.0
SYD1_k127_82059_6 Ferric reductase NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 307.0
SYD1_k127_8210642_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1430.0
SYD1_k127_8210642_1 dna polymerase III (Chi subunit) K02339 - 2.7.7.7 0.00000000000000000000000000000000000003621 147.0
SYD1_k127_8210642_2 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 0.000000000000000000000000000000000004769 137.0
SYD1_k127_8210642_3 Sensors of blue-light using FAD - - - 0.0000000000000001317 85.0
SYD1_k127_8236800_0 COG1257 Hydroxymethylglutaryl-CoA reductase K00021 - 1.1.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006851 556.0
SYD1_k127_8236800_1 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009446 539.0
SYD1_k127_8236800_2 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 514.0
SYD1_k127_8236800_3 signal peptide protein - - - 0.0000000000000000000000000000002716 132.0
SYD1_k127_8236800_4 Psort location Cytoplasmic, score 8.87 K02477,K07705 - - 0.0000663 50.0
SYD1_k127_8239934_0 ATP synthase alpha/beta family, nucleotide-binding domain K02412 - 3.6.3.14 1.146e-202 641.0
SYD1_k127_8239934_1 The M ring may be actively involved in energy transduction K02409 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 462.0
SYD1_k127_8239934_2 Flagellar motor switch K02410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 424.0
SYD1_k127_8239934_3 FlhB HrpN YscU SpaS Family K04061 - - 0.000000000000000000000000000002059 123.0
SYD1_k127_8239934_4 Flagellar hook-length control protein FliK - - - 0.00000000000002071 83.0
SYD1_k127_8239934_5 flagellar assembly protein FliH K02411 - - 0.00000000000002652 82.0
SYD1_k127_8239934_6 Flagellar hook-basal body complex protein FliE K02408 - - 0.00000000001709 69.0
SYD1_k127_8239934_7 flagellar K02413 - - 0.00000000001801 70.0
SYD1_k127_8239934_8 Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility - - - 0.0000000001594 72.0
SYD1_k127_8248037_0 mechanosensitive ion channel K16052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004165 437.0
SYD1_k127_8248037_1 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000004797 171.0
SYD1_k127_8325463_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 1.759e-232 723.0
SYD1_k127_8325463_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 509.0
SYD1_k127_8325463_10 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 310.0
SYD1_k127_8325463_11 Oxidoreductase FAD-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008687 313.0
SYD1_k127_8325463_12 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 304.0
SYD1_k127_8325463_13 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002186 283.0
SYD1_k127_8325463_14 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001027 271.0
SYD1_k127_8325463_15 NIF3 (NGG1p interacting factor 3) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002492 248.0
SYD1_k127_8325463_16 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000001033 233.0
SYD1_k127_8325463_17 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000129 231.0
SYD1_k127_8325463_18 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.000000000000000000000000000000000000000000000000004714 186.0
SYD1_k127_8325463_19 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.000000000000000000000000000000000000000000000005788 173.0
SYD1_k127_8325463_2 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009734 494.0
SYD1_k127_8325463_20 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.000000000000000000000000000000000000000000002373 166.0
SYD1_k127_8325463_21 Stringent starvation protein B K03600 - - 0.0000000000000000000000000000000000000002233 154.0
SYD1_k127_8325463_22 phosphoribosyl-ATP pyrophosphohydrolase K01523 GO:0000105,GO:0003674,GO:0003824,GO:0004636,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.6.1.31 0.00000000000000000000000000000000000009498 144.0
SYD1_k127_8325463_23 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.000000000000000000000000000009913 122.0
SYD1_k127_8325463_24 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000142 123.0
SYD1_k127_8325463_25 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000000000001025 102.0
SYD1_k127_8325463_3 Belongs to the peptidase S1C family K04691,K04772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914 439.0
SYD1_k127_8325463_4 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 405.0
SYD1_k127_8325463_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 405.0
SYD1_k127_8325463_6 Cytochrome C1 K00413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 359.0
SYD1_k127_8325463_7 Glutathione S-transferase K03599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 355.0
SYD1_k127_8325463_8 Alkane 1-monooxygenase K00496,K10616,K15757 - 1.14.15.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 365.0
SYD1_k127_8325463_9 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008995 324.0
SYD1_k127_8332462_0 Polysaccharide biosynthesis protein - - - 1.926e-224 711.0
SYD1_k127_8332462_1 Capsule polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004622 415.0
SYD1_k127_8332462_2 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 308.0
SYD1_k127_8332462_3 Bacterial sugar transferase K13012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 297.0
SYD1_k127_8332462_4 PFAM NAD dependent epimerase dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000001871 223.0
SYD1_k127_8332462_5 polysaccharide biosynthetic process - - - 0.00000000000000000000004637 110.0
SYD1_k127_8383730_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 3.914e-250 788.0
SYD1_k127_8383730_1 glycosyl transferase - - - 0.00000000001923 64.0
SYD1_k127_8450166_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 4.225e-258 807.0
SYD1_k127_8450166_1 Deoxyribodipyrimidine photo-lyase-related protein K06876 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007054 614.0
SYD1_k127_8450166_2 B12 binding domain K22491 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 303.0
SYD1_k127_8450166_3 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005141 278.0
SYD1_k127_8450166_4 FAD linked oxidase domain protein - - - 0.000000000000000000000000000000000000000000000001208 176.0
SYD1_k127_8450166_5 protein conserved in bacteria - - - 0.00000000000000000000172 94.0
SYD1_k127_8459672_0 Flavin-binding monooxygenase-like K03379 GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0043446,GO:0043448,GO:0044237,GO:0044248,GO:0071704,GO:1901575 1.14.13.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 586.0
SYD1_k127_8459672_1 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000252 61.0
SYD1_k127_8476393_0 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003035 288.0
SYD1_k127_8515596_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 4.376e-309 960.0
SYD1_k127_8524869_0 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 1.604e-251 784.0
SYD1_k127_8524869_1 aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004676 282.0
SYD1_k127_8524869_2 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000001827 265.0
SYD1_k127_8524869_3 Alkyl hydroperoxide reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002387 246.0
SYD1_k127_8524869_4 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000123 152.0
SYD1_k127_8524869_5 Bacterial protein of unknown function (DUF883) - - - 0.0000000000000000000000000000001495 126.0
SYD1_k127_8524869_6 - - - - 0.0000000000000000000001796 104.0
SYD1_k127_8524869_7 membrane - - - 0.000000005748 63.0
SYD1_k127_8560304_0 Belongs to the DNA photolyase family K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004432 333.0
SYD1_k127_8612921_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007744 397.0
SYD1_k127_8622377_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 6.393e-286 889.0
SYD1_k127_8622377_1 Acyl-CoA dehydrogenase N terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 491.0
SYD1_k127_8623004_0 COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000691 236.0
SYD1_k127_8623004_1 PFAM Bacterial regulatory proteins, gntR family, FCD domain - - - 0.00000000000000000000000000000000000000000001112 165.0
SYD1_k127_8623004_2 His Kinase A (phospho-acceptor) domain - - - 0.000000000000002014 77.0
SYD1_k127_8636986_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 4.365e-225 708.0
SYD1_k127_8672893_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2354.0
SYD1_k127_8672893_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1238.0
SYD1_k127_8672893_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 535.0
SYD1_k127_8672893_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000106 276.0
SYD1_k127_8672893_4 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005385 239.0
SYD1_k127_8672893_5 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000003761 81.0
SYD1_k127_8698939_0 Outer membrane efflux protein - - - 1.243e-247 769.0
SYD1_k127_8898057_0 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006292 438.0
SYD1_k127_8898057_1 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 355.0
SYD1_k127_8898057_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000001189 242.0
SYD1_k127_8898057_3 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000000000000000000002504 155.0
SYD1_k127_8898057_4 Required for maturation of 30S ribosomal subunits K09748 - - 0.000000000000000000000000000000000000003847 151.0
SYD1_k127_8898057_5 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.000000000000000004582 85.0
SYD1_k127_8898057_6 Protein of unknown function (DUF1289) K06938 - - 0.000000000000002824 77.0
SYD1_k127_8898057_7 - - - - 0.00000000002146 64.0
SYD1_k127_8899926_0 Pfam:DUF2424 K03379,K18371,K21730 - 1.14.13.160,1.14.13.22,1.14.13.226 1.497e-298 936.0
SYD1_k127_8899926_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 2.233e-298 921.0
SYD1_k127_8899926_10 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006033 274.0
SYD1_k127_8899926_11 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000001338 197.0
SYD1_k127_8899926_12 response regulator, receiver K11712 - - 0.00000000000000000000000000000000000000000000003499 177.0
SYD1_k127_8899926_13 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000000000000006325 168.0
SYD1_k127_8899926_14 Ribosomal protein L31 K02909 - - 0.000000000000000000000000000000002128 131.0
SYD1_k127_8899926_15 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.00000007062 60.0
SYD1_k127_8899926_2 Belongs to the GMC oxidoreductase family - - - 9.336e-250 781.0
SYD1_k127_8899926_3 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004244 507.0
SYD1_k127_8899926_4 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 490.0
SYD1_k127_8899926_5 periplasmic K11688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008991 389.0
SYD1_k127_8899926_6 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K11711 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008115 388.0
SYD1_k127_8899926_7 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 322.0
SYD1_k127_8899926_8 Chloride channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 305.0
SYD1_k127_8899926_9 PFAM helix-turn-helix- domain containing protein AraC type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000276 288.0
SYD1_k127_8906117_0 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 451.0
SYD1_k127_8906117_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007563 376.0
SYD1_k127_8906117_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000733 322.0
SYD1_k127_8906117_3 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000008633 263.0
SYD1_k127_8906117_4 Domain of unknown function (DUF1732) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005307 259.0
SYD1_k127_8906117_5 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000005387 178.0
SYD1_k127_8906117_6 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family K18139 - - 0.0000000000000000000000000000000000000000132 156.0
SYD1_k127_8906117_7 Two component signalling adaptor domain K03408 - - 0.00000000000000000002963 97.0
SYD1_k127_9037099_0 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 525.0
SYD1_k127_9037099_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 378.0
SYD1_k127_9037099_2 Peptidase M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000004881 204.0
SYD1_k127_9037099_3 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.000000000000000000000000000000000000000000000000000001422 200.0
SYD1_k127_9037099_4 Protein of unknown function (DUF1778) - - - 0.000000000000000000000000000001434 123.0
SYD1_k127_9037099_5 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000003923 121.0
SYD1_k127_912857_0 Subtilase family K14645 - - 0.00000000000000000000000000000000000000000001195 175.0
SYD1_k127_9166834_0 COG0500 SAM-dependent methyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005913 342.0
SYD1_k127_9166834_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 335.0
SYD1_k127_9166834_2 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0000000000000000000000000001055 116.0
SYD1_k127_91965_0 Histidine kinase K07675 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 342.0
SYD1_k127_91965_1 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006756 338.0
SYD1_k127_91965_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006482,GO:0006807,GO:0006935,GO:0008150,GO:0008152,GO:0008214,GO:0008984,GO:0009605,GO:0009987,GO:0016020,GO:0016787,GO:0016788,GO:0018277,GO:0019538,GO:0019899,GO:0036211,GO:0040011,GO:0042221,GO:0042330,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051723,GO:0052689,GO:0070988,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1990827 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000001389 204.0
SYD1_k127_91965_3 CheD chemotactic sensory transduction - - - 0.000000000000000000000000000000000000000000007172 171.0
SYD1_k127_91965_4 response regulator - - - 0.000000000000000000000000000000000002143 141.0
SYD1_k127_97326_0 This family consists of a number of uncharacterised bacterial proteins. The function of this family is K11900 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003493 578.0
SYD1_k127_97326_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 GO:0003674,GO:0003824,GO:0004362,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006091,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009055,GO:0009636,GO:0009987,GO:0015036,GO:0015037,GO:0015038,GO:0015949,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0022900,GO:0031974,GO:0033554,GO:0034599,GO:0034641,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0055114,GO:0070013,GO:0070887,GO:0071704,GO:0097237,GO:0098754,GO:0098869,GO:1901360,GO:1990748 1.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 384.0
SYD1_k127_97326_2 TIGRFAM type VI secretion protein, VC_A0107 family K11901 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000742 263.0
SYD1_k127_97326_3 ImpA, N-terminal, type VI secretion system K11902 - - 0.0000000000000000000000000000000000000000005172 171.0
SYD1_k127_98211_0 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 9.392e-208 652.0
SYD1_k127_98211_1 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004244 443.0
SYD1_k127_98211_2 LysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001833 267.0
SYD1_k127_98211_3 MaoC like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000434 224.0
SYD1_k127_98211_4 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000001616 118.0
SYD1_k127_99523_0 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005278 281.0
SYD1_k127_99523_1 Oxidoreductase - - - 0.0000000000000000000000000003305 115.0
SYD1_k127_99523_2 Domain of unknown function (DUF4149) - - - 0.0000000000000000001601 91.0
SYD1_k127_996943_0 Domain of unknown function (DUF4394) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005621 271.0
SYD1_k127_996943_1 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 - - 0.000000008726 57.0
SYD1_k127_99889_0 Domain of Unknown Function (DUF748) - - - 3.615e-198 655.0
SYD1_k127_99889_1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006626 551.0
SYD1_k127_99889_2 Hexapeptide repeat of succinyl-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001762 263.0
SYD1_k127_99889_3 lipid A biosynthetic process K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000009979 243.0
SYD1_k127_99889_4 protein possibly involved in aromatic compounds catabolism - - - 0.00000000000000000000000000000000000000000000004026 174.0
SYD1_k127_99889_5 membrane K08972 - - 0.00000000000000000000000000000007862 126.0