Overview

ID MAG03787
Name SYD3_bin.12
Sample SMP0096
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Polarisedimenticolia
Order Polarisedimenticolales
Family DASRJG01
Genus
Species
Assembly information
Completeness (%) 100.0
Contamination (%) 6.2
GC content (%) 72.0
N50 (bp) 27,104
Genome size (bp) 4,033,553

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3284

Gene name Description KEGG GOs EC E-value Score Sequence
SYD3_k127_10011924_0 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000591 234.0
SYD3_k127_10011924_1 - - - - 0.000000000000000000000000000000000000000004963 167.0
SYD3_k127_10011924_2 Belongs to the sulfur carrier protein TusA family K04085 - - 0.00000000000000001957 84.0
SYD3_k127_10011924_3 PFAM Rieske 2Fe-2S K02636 - 1.10.9.1 0.00000000000005535 83.0
SYD3_k127_10011924_4 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000002332 72.0
SYD3_k127_10034915_0 hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 317.0
SYD3_k127_10034915_1 Hydrogenase formation hypA family K04654 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006723 255.0
SYD3_k127_10109250_0 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000004045 154.0
SYD3_k127_10109250_1 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000007501 122.0
SYD3_k127_10109250_2 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00006763 47.0
SYD3_k127_10145650_0 2-oxoglutarate dehydrogenase N-terminus K00164 - 1.2.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 421.0
SYD3_k127_10145650_1 Methyltransferase FkbM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003038 282.0
SYD3_k127_10145650_2 PFAM Cation transporter K03498 - - 0.000000000000000000000000000000000000000000000000000000000000004381 250.0
SYD3_k127_10145650_3 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000003361 169.0
SYD3_k127_10145650_4 Mechanosensitive ion channel - - - 0.00000002235 66.0
SYD3_k127_10162301_0 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007194 474.0
SYD3_k127_10162301_1 CAAX prenyl protease N-terminal, five membrane helices - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 448.0
SYD3_k127_10162301_10 BON domain - - - 0.000000000001308 78.0
SYD3_k127_10162301_11 - - - - 0.000000000001428 73.0
SYD3_k127_10162301_12 Peptide-N-glycosidase F, C terminal - - - 0.00004134 57.0
SYD3_k127_10162301_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 332.0
SYD3_k127_10162301_3 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 301.0
SYD3_k127_10162301_4 Trypsin-like peptidase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007242 258.0
SYD3_k127_10162301_5 Protein of unknown function (DUF423) - - - 0.000000000000000000000000000000000000000002075 158.0
SYD3_k127_10162301_6 COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K21563 - - 0.000000000000000000000000000001797 129.0
SYD3_k127_10162301_7 PA14 domain - - - 0.00000000000000001361 98.0
SYD3_k127_10162301_8 oxygen carrier activity K07216 - - 0.0000000000000233 79.0
SYD3_k127_10183564_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 9.554e-240 757.0
SYD3_k127_10183564_1 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006508 604.0
SYD3_k127_10183564_10 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 302.0
SYD3_k127_10183564_11 Amidinotransferase K01482 - 3.5.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 298.0
SYD3_k127_10183564_12 Deoxynucleoside kinase K15518 - 2.7.1.113 0.000000000000000000000000000000000000000000000000000000000000000179 238.0
SYD3_k127_10183564_13 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000000000000000000000000000000000000000000006605 207.0
SYD3_k127_10183564_14 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.00000000000000000000000000000000000000000000000000000002465 201.0
SYD3_k127_10183564_15 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000000000000000002501 218.0
SYD3_k127_10183564_16 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000000001629 191.0
SYD3_k127_10183564_17 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000002219 198.0
SYD3_k127_10183564_18 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.00000000000000000000000000000000000000000000007362 176.0
SYD3_k127_10183564_19 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000001975 164.0
SYD3_k127_10183564_2 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 562.0
SYD3_k127_10183564_20 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000006279 169.0
SYD3_k127_10183564_21 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000000000000003344 150.0
SYD3_k127_10183564_22 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.000000000000000000000000000000000006184 143.0
SYD3_k127_10183564_23 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000008038 137.0
SYD3_k127_10183564_24 Uncharacterized conserved protein (DUF2277) - - - 0.00000000000000000000000000008307 117.0
SYD3_k127_10183564_25 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000001156 129.0
SYD3_k127_10183564_26 FR47-like protein - - - 0.000000000000000004823 95.0
SYD3_k127_10183564_27 - - - - 0.00000000000000002255 84.0
SYD3_k127_10183564_28 - - - - 0.0000000000001908 75.0
SYD3_k127_10183564_29 Tetratricopeptide repeat - - - 0.000000008078 66.0
SYD3_k127_10183564_3 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006001 537.0
SYD3_k127_10183564_4 O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 529.0
SYD3_k127_10183564_5 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 431.0
SYD3_k127_10183564_6 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity K06188 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 402.0
SYD3_k127_10183564_7 Phosphoenolpyruvate phosphomutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002562 344.0
SYD3_k127_10183564_8 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 321.0
SYD3_k127_10183564_9 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009962 316.0
SYD3_k127_10234444_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 6.44e-302 938.0
SYD3_k127_10234444_1 Periplasmic copper-binding protein (NosD) K07218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008692 608.0
SYD3_k127_10234444_10 RNA recognition motif - - - 0.0000000000000000000000000001231 128.0
SYD3_k127_10234444_11 Ferredoxin K02230 - 6.6.1.2 0.00000000000000000000006211 114.0
SYD3_k127_10234444_12 lipoprotein involved in nitrous oxide reduction - - - 0.00006045 46.0
SYD3_k127_10234444_2 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001838 579.0
SYD3_k127_10234444_3 Tfp pilus assembly protein FimV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 387.0
SYD3_k127_10234444_4 ABC transporter K01990,K19340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 360.0
SYD3_k127_10234444_5 ABC-2 family transporter protein K19341 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 318.0
SYD3_k127_10234444_6 Zinc-uptake complex component A periplasmic K09815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000108 273.0
SYD3_k127_10234444_7 ABC 3 transport family K02075 - - 0.00000000000000000000000000000000000000000000000000000000000000006541 232.0
SYD3_k127_10234444_8 TPR repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000004618 248.0
SYD3_k127_10234444_9 lipoprotein involved in nitrous oxide reduction K19342 - - 0.00000000000000000000000000000000000000001786 173.0
SYD3_k127_10272459_0 C-terminal binding-module, SLH-like, of glucodextranase - - - 0.0000000000000000000000000000000000000000000000000000000000001121 230.0
SYD3_k127_10272459_1 - - - - 0.0000000000000000000000000000000000000000000000000000001579 198.0
SYD3_k127_10275553_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008017 404.0
SYD3_k127_10275553_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000009001 168.0
SYD3_k127_10275553_2 TIGRFAM TonB family protein K03832 - - 0.000000000000002371 86.0
SYD3_k127_10300081_0 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000005336 160.0
SYD3_k127_10300081_1 Thrombospondin 4 K04659,K16857 GO:0000902,GO:0001932,GO:0001934,GO:0001936,GO:0001938,GO:0001968,GO:0002682,GO:0002684,GO:0002685,GO:0002687,GO:0002688,GO:0002690,GO:0003674,GO:0005102,GO:0005178,GO:0005488,GO:0005509,GO:0005515,GO:0005518,GO:0005539,GO:0005575,GO:0005576,GO:0005604,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005912,GO:0005924,GO:0005927,GO:0006928,GO:0006950,GO:0007155,GO:0007275,GO:0007399,GO:0007517,GO:0007610,GO:0008150,GO:0008201,GO:0008284,GO:0009653,GO:0009888,GO:0009893,GO:0009987,GO:0010562,GO:0010604,GO:0012505,GO:0014812,GO:0016043,GO:0016203,GO:0016477,GO:0016525,GO:0016528,GO:0016529,GO:0019220,GO:0019222,GO:0022008,GO:0022603,GO:0022607,GO:0022610,GO:0030030,GO:0030054,GO:0030055,GO:0030154,GO:0030182,GO:0030334,GO:0030335,GO:0031012,GO:0031175,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031594,GO:0032101,GO:0032103,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032879,GO:0032989,GO:0032990,GO:0032991,GO:0033554,GO:0033555,GO:0033627,GO:0034103,GO:0034976,GO:0035989,GO:0040011,GO:0040012,GO:0040017,GO:0042127,GO:0042325,GO:0042327,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043236,GO:0043237,GO:0043933,GO:0044085,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045202,GO:0045765,GO:0045937,GO:0046872,GO:0048265,GO:0048266,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048666,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050678,GO:0050679,GO:0050730,GO:0050731,GO:0050789,GO:0050793,GO:0050794,GO:0050839,GO:0050840,GO:0050896,GO:0050920,GO:0050921,GO:0051093,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051270,GO:0051272,GO:0051451,GO:0051674,GO:0051716,GO:0060255,GO:0060538,GO:0061061,GO:0061448,GO:0062023,GO:0065003,GO:0065007,GO:0070161,GO:0071603,GO:0071622,GO:0071624,GO:0071840,GO:0080090,GO:0090022,GO:0090023,GO:0090136,GO:0097367,GO:0098609,GO:0120036,GO:0120039,GO:1901342,GO:1901343,GO:1901681,GO:1902622,GO:1902624,GO:2000026,GO:2000145,GO:2000147,GO:2000181 - 0.0000000000000000000000000000000007305 143.0
SYD3_k127_10300081_2 helix_turn_helix, arabinose operon control protein - - - 0.000000000001218 77.0
SYD3_k127_10300081_3 PBS lyase HEAT-like repeat - - - 0.0000000000205 78.0
SYD3_k127_10300081_4 Cupin 2, conserved barrel domain protein - - - 0.0001883 53.0
SYD3_k127_10300081_5 acid phosphatase activity - - - 0.0008264 52.0
SYD3_k127_10509316_0 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 1.928e-218 716.0
SYD3_k127_10509316_1 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007891 522.0
SYD3_k127_10509316_10 FAD binding domain K21401 - 1.3.99.38 0.000000000000000000000000000000000000000000000001638 196.0
SYD3_k127_10509316_11 Methyltransferase domain - - - 0.000000000000000000000000000000000000000712 161.0
SYD3_k127_10509316_12 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000002998 147.0
SYD3_k127_10509316_13 cheY-homologous receiver domain - - - 0.000000000000000000000000000007689 136.0
SYD3_k127_10509316_14 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000005496 96.0
SYD3_k127_10509316_2 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008048 478.0
SYD3_k127_10509316_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 468.0
SYD3_k127_10509316_4 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384,K03671 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005818 409.0
SYD3_k127_10509316_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 397.0
SYD3_k127_10509316_6 phosphoglycerate mutase activity K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003472 405.0
SYD3_k127_10509316_7 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008467 274.0
SYD3_k127_10509316_8 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000007657 209.0
SYD3_k127_10509316_9 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.0000000000000000000000000000000000000000000000000000004448 197.0
SYD3_k127_10514835_0 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000002567 228.0
SYD3_k127_10514835_1 IMG reference gene - - - 0.0000000000000000000000000005514 131.0
SYD3_k127_10595994_0 Nitrogenase molybdenum-iron protein alpha chain K02586 - 1.18.6.1 2.093e-312 958.0
SYD3_k127_10595994_1 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 1.267e-310 953.0
SYD3_k127_10595994_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.021e-214 669.0
SYD3_k127_10595994_3 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588 - 1.18.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 537.0
SYD3_k127_10595994_4 Belongs to the NifD NifK NifE NifN family K02587 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 524.0
SYD3_k127_10595994_5 TIGRFAM ADP-ribosyl- dinitrogen reductase hydrolase K05521 - 3.2.2.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005502 413.0
SYD3_k127_10595994_6 transcription factor binding K02584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008689 408.0
SYD3_k127_10595994_7 PFAM Dinitrogenase reductase ADP-ribosyltransferase K05951 - 2.4.2.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 378.0
SYD3_k127_10595994_8 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000001632 192.0
SYD3_k127_10599401_0 xanthine dehydrogenase activity K04108 - 1.3.7.9 5.17e-273 872.0
SYD3_k127_10599401_1 Glycogen debranching enzyme - - - 4.748e-220 704.0
SYD3_k127_10599401_10 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005969 300.0
SYD3_k127_10599401_11 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004178 302.0
SYD3_k127_10599401_12 MatE K03327 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002908 277.0
SYD3_k127_10599401_13 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002422 270.0
SYD3_k127_10599401_14 esterase - - - 0.0000000000000000000000000000000000000000000000000000000000007535 222.0
SYD3_k127_10599401_15 [2Fe-2S] binding domain K03518,K13483 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000004695 200.0
SYD3_k127_10599401_16 positive regulation of proteasomal protein catabolic process - - - 0.0000000000000000000000000000000000000002212 169.0
SYD3_k127_10599401_17 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000007622 160.0
SYD3_k127_10599401_18 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) K07259 - 3.4.16.4 0.00000000000000000000000000000000003957 152.0
SYD3_k127_10599401_19 translation initiation factor activity K06996 - - 0.00000000000000000000000000000000007242 139.0
SYD3_k127_10599401_2 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 466.0
SYD3_k127_10599401_20 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07025 - - 0.000000000000000000000000000002504 134.0
SYD3_k127_10599401_21 Smr domain - - - 0.00000000000000000000000000008032 120.0
SYD3_k127_10599401_22 Belongs to the ArsC family - - - 0.00000000000000000000003767 101.0
SYD3_k127_10599401_23 Peptidase family M1 domain - - - 0.0000000000000000000003393 111.0
SYD3_k127_10599401_24 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000006006 89.0
SYD3_k127_10599401_26 PFAM CBS domain containing protein - - - 0.00000000000000001312 88.0
SYD3_k127_10599401_27 PFAM Tetratricopeptide repeat - - - 0.000000005265 68.0
SYD3_k127_10599401_28 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000008257 58.0
SYD3_k127_10599401_29 Aspartyl protease - - - 0.0000006803 62.0
SYD3_k127_10599401_3 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008266 457.0
SYD3_k127_10599401_30 Aerotolerance regulator N-terminal - - - 0.00001176 59.0
SYD3_k127_10599401_32 - - - - 0.000996 52.0
SYD3_k127_10599401_4 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000656 456.0
SYD3_k127_10599401_5 ligase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004123 394.0
SYD3_k127_10599401_6 aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003804 389.0
SYD3_k127_10599401_7 Transglycosylase K05365,K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 364.0
SYD3_k127_10599401_8 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 351.0
SYD3_k127_10599401_9 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 328.0
SYD3_k127_10754707_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.132e-256 806.0
SYD3_k127_10754707_1 Carbamoyltransferase C-terminus K00612 - - 2.851e-255 800.0
SYD3_k127_10754707_10 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.0000000000000000000000000000000000000000000000000000007803 206.0
SYD3_k127_10754707_11 HlyD family secretion protein - - - 0.00000000000000000000000000000000000000000000000001342 205.0
SYD3_k127_10754707_12 major facilitator superfamily - - - 0.00000000000000000000000000000000000000000002671 177.0
SYD3_k127_10754707_13 HlyD family secretion protein K02005 - - 0.00000000000000000000000000000000000009927 164.0
SYD3_k127_10754707_14 COG1566 Multidrug resistance efflux pump - - - 0.000000000000000000000000000000000008471 151.0
SYD3_k127_10754707_15 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000007251 147.0
SYD3_k127_10754707_16 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K00760,K04075 GO:0008150,GO:0040007 2.4.2.8,6.3.4.19 0.00000000000000000000000000003286 129.0
SYD3_k127_10754707_17 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000009568 116.0
SYD3_k127_10754707_18 YbbR-like protein - - - 0.000000000000000001182 98.0
SYD3_k127_10754707_19 - - - - 0.000000000011 67.0
SYD3_k127_10754707_2 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 397.0
SYD3_k127_10754707_20 - - - - 0.000000002665 65.0
SYD3_k127_10754707_21 TilS substrate binding domain K04075 - 6.3.4.19 0.000007399 59.0
SYD3_k127_10754707_22 O-linked N-acetylglucosamine transferase SPINDLY family - - - 0.00003978 56.0
SYD3_k127_10754707_23 COG0457 FOG TPR repeat - - - 0.0002567 53.0
SYD3_k127_10754707_3 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004484 360.0
SYD3_k127_10754707_4 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005956 365.0
SYD3_k127_10754707_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007011 338.0
SYD3_k127_10754707_6 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007139 342.0
SYD3_k127_10754707_7 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002062 292.0
SYD3_k127_10754707_8 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000003683 258.0
SYD3_k127_10754707_9 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002772 277.0
SYD3_k127_1081360_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 1.976e-211 676.0
SYD3_k127_1081360_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 422.0
SYD3_k127_1081360_10 FeoA K04758 - - 0.000006804 59.0
SYD3_k127_1081360_2 Ribonuclease E/G family K08300,K08301 GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008996,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692 370.0
SYD3_k127_1081360_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001007 274.0
SYD3_k127_1081360_4 Thioesterase superfamily - - - 0.000000000000000000000000000000000565 137.0
SYD3_k127_1081360_5 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000003565 145.0
SYD3_k127_1081360_6 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000006907 114.0
SYD3_k127_1081360_7 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.000000000000000003093 89.0
SYD3_k127_1081360_8 Tetratricopeptide repeat - - - 0.000000000001574 79.0
SYD3_k127_1081360_9 PFAM iron dependent repressor K03709 - - 0.000000006202 64.0
SYD3_k127_1189004_0 Acyl-CoA dehydrogenase, N-terminal domain - - - 1.338e-242 766.0
SYD3_k127_1189004_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 7.756e-225 710.0
SYD3_k127_1189004_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000771 559.0
SYD3_k127_1189004_3 Protein of unknown function (DUF1684) K09164 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 346.0
SYD3_k127_1189004_4 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009153 316.0
SYD3_k127_1189004_5 Alkaline phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000001184 227.0
SYD3_k127_1189004_6 Protein of unknown function (DUF1648) - - - 0.000000000000000000000001423 118.0
SYD3_k127_1189004_7 Outer membrane receptor - - - 0.000000000000000000000001561 123.0
SYD3_k127_1189004_8 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.0000000000000000000001033 115.0
SYD3_k127_1189004_9 Transcriptional regulator, GntR family - - - 0.000000000000000000386 92.0
SYD3_k127_1194749_0 4Fe-4S dicluster domain - - - 9.192e-196 637.0
SYD3_k127_1194749_1 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 444.0
SYD3_k127_1194749_10 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000002591 181.0
SYD3_k127_1194749_11 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000001487 169.0
SYD3_k127_1194749_12 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000001832 172.0
SYD3_k127_1194749_13 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000001595 140.0
SYD3_k127_1194749_14 nitrite reductase [NAD(P)H] activity K00363,K05710 - 1.7.1.15 0.00000000000000002093 97.0
SYD3_k127_1194749_15 - - - - 0.0000000009505 67.0
SYD3_k127_1194749_2 C-methyltransferase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009307 441.0
SYD3_k127_1194749_3 Polysaccharide biosynthesis protein K01709 - 4.2.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007201 372.0
SYD3_k127_1194749_4 TIGRFAM Glucose-1-phosphate cytidylyltransferase K00978 - 2.7.7.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000776 323.0
SYD3_k127_1194749_5 Cephalosporin hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004644 298.0
SYD3_k127_1194749_6 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K01147 GO:0000175,GO:0000178,GO:0000932,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0019439,GO:0022613,GO:0032991,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0035770,GO:0036464,GO:0042254,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1902494,GO:1905354,GO:1990904 3.1.13.1 0.0000000000000000000000000000000000000000000000000000000000000000000000003186 269.0
SYD3_k127_1194749_7 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000002429 213.0
SYD3_k127_1194749_8 Hexapeptide repeat of succinyl-transferase - - - 0.0000000000000000000000000000000000000000000000000002747 206.0
SYD3_k127_1194749_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000009868 189.0
SYD3_k127_1226173_0 COG3666 Transposase and inactivated derivatives - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007161 398.0
SYD3_k127_1226173_1 endonuclease activity K07451 - - 0.00000000000000000000000000000000000003623 157.0
SYD3_k127_1327068_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 448.0
SYD3_k127_1327068_1 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 328.0
SYD3_k127_1327068_2 exo-alpha-(2->6)-sialidase activity K01406 - 3.4.24.40 0.0000000000000000000000000000000000000004265 170.0
SYD3_k127_1327068_3 PFAM CoA-binding domain protein K06929 - - 0.00000000000000000002456 95.0
SYD3_k127_1327068_4 Putative restriction endonuclease - - - 0.00001306 51.0
SYD3_k127_1387413_0 Belongs to the peptidase S1B family - - - 7.84e-224 722.0
SYD3_k127_1387413_1 Metallopeptidase family M24 K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 357.0
SYD3_k127_1387413_2 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 360.0
SYD3_k127_1387413_3 synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007751 283.0
SYD3_k127_1387413_4 Transcriptional regulator - - - 0.000000000000000000000008711 116.0
SYD3_k127_1387413_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 GO:0001101,GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009410,GO:0009415,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010035,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042221,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1901700,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.00000000000009136 79.0
SYD3_k127_1403399_1 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.00000000000002679 72.0
SYD3_k127_1403399_2 Thrombospondin 2 K04659,K16857 GO:0003674,GO:0005488,GO:0005539,GO:0005575,GO:0005576,GO:0005604,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008201,GO:0012505,GO:0016525,GO:0022603,GO:0030141,GO:0031012,GO:0031091,GO:0031410,GO:0031982,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0044087,GO:0044089,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0045765,GO:0048518,GO:0048519,GO:0048522,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051239,GO:0051240,GO:0051241,GO:0051960,GO:0051962,GO:0051963,GO:0051965,GO:0062023,GO:0065007,GO:0065008,GO:0097367,GO:0097708,GO:0099503,GO:1901342,GO:1901343,GO:1901681,GO:2000026,GO:2000181 - 0.0000000001426 75.0
SYD3_k127_1410689_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 595.0
SYD3_k127_1410689_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 306.0
SYD3_k127_1410689_2 TIGRFAM mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K00971 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000001363 267.0
SYD3_k127_1410689_3 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000002075 153.0
SYD3_k127_1410689_4 Calcineurin-like phosphoesterase K03269 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0019897,GO:0019898,GO:0030145,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.54 0.000000000000000000000000000000000001889 158.0
SYD3_k127_1410689_5 Sporulation related domain - - - 0.000832 52.0
SYD3_k127_1429355_0 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004289 571.0
SYD3_k127_1433437_0 Di-haem oxidoreductase, putative peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003878 253.0
SYD3_k127_1433437_1 oligosaccharyl transferase activity - - - 0.00000000000000000000000000007378 133.0
SYD3_k127_1433437_2 Membrane - - - 0.00003763 52.0
SYD3_k127_1433437_3 - - - - 0.00003847 54.0
SYD3_k127_1441587_0 Protein conserved in bacteria - - - 0.00000000000002027 88.0
SYD3_k127_1455728_0 CoA binding domain K09181 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 543.0
SYD3_k127_1498357_0 Protein of unknown function, DUF255 K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 630.0
SYD3_k127_1498357_1 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002903 608.0
SYD3_k127_1498357_10 Acyl-transferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000004837 175.0
SYD3_k127_1498357_11 metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000007887 141.0
SYD3_k127_1498357_12 tRNA (adenine(22)-N(1))-methyltransferase K06967 - 2.1.1.217 0.00000000000000000000000001263 119.0
SYD3_k127_1498357_13 - - - - 0.000000000002497 81.0
SYD3_k127_1498357_14 - - - - 0.00000000005759 69.0
SYD3_k127_1498357_15 oxidoreductase activity - - - 0.0002231 54.0
SYD3_k127_1498357_2 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003883 475.0
SYD3_k127_1498357_3 Belongs to the short-chain dehydrogenases reductases (SDR) family K05886 - 1.1.1.276 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008659 324.0
SYD3_k127_1498357_4 Integral membrane protein TerC family K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 322.0
SYD3_k127_1498357_5 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 317.0
SYD3_k127_1498357_6 Peptidase family M50 K06212,K06402 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002762 289.0
SYD3_k127_1498357_7 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001318 269.0
SYD3_k127_1498357_8 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000001071 188.0
SYD3_k127_1498357_9 hydrolase of the alpha beta-hydrolase fold K07019 GO:0003674,GO:0003824,GO:0006629,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0044237,GO:0044238,GO:0044255,GO:0050526,GO:0052689,GO:0071704 - 0.000000000000000000000000000000000000000000000374 193.0
SYD3_k127_1511963_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005868 507.0
SYD3_k127_1511963_1 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K01761,K10764 - 2.5.1.48,4.4.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000004531 264.0
SYD3_k127_1511963_2 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000001371 231.0
SYD3_k127_1511963_4 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.00000000000003565 83.0
SYD3_k127_1511963_5 ATPase-coupled phosphate ion transmembrane transporter activity - - - 0.000004661 55.0
SYD3_k127_1522097_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 1.261e-291 910.0
SYD3_k127_1522097_1 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 5.427e-239 760.0
SYD3_k127_1522097_10 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000006432 260.0
SYD3_k127_1522097_11 PFAM response regulator receiver K07665 - - 0.00000000000000000000000000000000000000000000000000000000000000000004932 238.0
SYD3_k127_1522097_12 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000005528 202.0
SYD3_k127_1522097_13 Histidine kinase K07644 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000268 202.0
SYD3_k127_1522097_14 MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000006453 202.0
SYD3_k127_1522097_15 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000000003626 199.0
SYD3_k127_1522097_16 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.000000000000000000000000000000000000000000008994 172.0
SYD3_k127_1522097_17 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000008852 147.0
SYD3_k127_1522097_18 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.000000000000000000000003237 116.0
SYD3_k127_1522097_19 ligase activity, forming carbon-carbon bonds K00627,K00645,K01572,K02160 - 2.3.1.12,2.3.1.39,4.1.1.3 0.000000000000000000004557 102.0
SYD3_k127_1522097_2 Putative methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004782 552.0
SYD3_k127_1522097_20 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016020,GO:0016740,GO:0016741,GO:0032259,GO:0040007,GO:0044424,GO:0044464,GO:0071944 2.1.1.163,2.1.1.201 0.00000000001566 77.0
SYD3_k127_1522097_21 COG1520 FOG WD40-like repeat - - - 0.000008368 57.0
SYD3_k127_1522097_22 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.0002626 45.0
SYD3_k127_1522097_3 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008697 543.0
SYD3_k127_1522097_4 AraC family transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 519.0
SYD3_k127_1522097_5 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 475.0
SYD3_k127_1522097_6 Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003454 438.0
SYD3_k127_1522097_7 Cytochrome C oxidase, mono-heme subunit/FixO K00405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003508 327.0
SYD3_k127_1522097_8 Threonyl and Alanyl tRNA synthetase second additional domain K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003161 287.0
SYD3_k127_1522097_9 Uncharacterized conserved protein (COG2071) K09166 - - 0.000000000000000000000000000000000000000000000000000000000000000000001768 248.0
SYD3_k127_1543973_0 Berberine and berberine like - - - 6.902e-196 619.0
SYD3_k127_1549688_0 Enoyl-CoA hydratase/isomerase K15513 - 4.1.2.44 1.805e-220 698.0
SYD3_k127_1549688_1 benzoyl-CoA oxygenase K15512 - 1.14.13.208 6.255e-202 642.0
SYD3_k127_1549688_10 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0000000000000000009891 101.0
SYD3_k127_1549688_11 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0001905 54.0
SYD3_k127_1549688_2 daunorubicin resistance ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008346 329.0
SYD3_k127_1549688_3 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 321.0
SYD3_k127_1549688_4 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001279 272.0
SYD3_k127_1549688_5 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000002982 264.0
SYD3_k127_1549688_6 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891,K15546 - 2.7.1.71 0.0000000000000000000000000000000000000000000000000001313 196.0
SYD3_k127_1549688_7 Memo-like protein - - - 0.000000000000000000000000000000000000000000000000001353 202.0
SYD3_k127_1549688_8 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.00000000000000000000000000000000000000005514 176.0
SYD3_k127_1549688_9 AMMECR1 K09141 - - 0.00000000000000000000000000000157 138.0
SYD3_k127_166521_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006351 532.0
SYD3_k127_166521_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 387.0
SYD3_k127_166521_10 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000007543 83.0
SYD3_k127_166521_11 peptidyl-tyrosine sulfation - - - 0.00000000004388 75.0
SYD3_k127_166521_12 Domain of unknown function (DUF4388) - - - 0.0000000009959 73.0
SYD3_k127_166521_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006528 391.0
SYD3_k127_166521_3 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000137 299.0
SYD3_k127_166521_4 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0030497,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0048037,GO:0050661,GO:0050662,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000001616 272.0
SYD3_k127_166521_5 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000489 225.0
SYD3_k127_166521_6 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.00000000000000000000000000000000000001298 154.0
SYD3_k127_166521_7 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0050896,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.00000000000000000000000001057 110.0
SYD3_k127_166521_8 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000000002206 106.0
SYD3_k127_166521_9 metal-binding, possibly nucleic acid-binding protein K07040 - - 0.00000000000000000004643 99.0
SYD3_k127_1676808_0 aconitate hydratase K01681 - 4.2.1.3 2.313e-309 976.0
SYD3_k127_1676808_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 2.208e-267 859.0
SYD3_k127_1676808_10 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000000007313 164.0
SYD3_k127_1676808_11 protein involved in formation of curli polymers - - - 0.00000000000000000000000000000000000000004708 166.0
SYD3_k127_1676808_2 Insulinase (Peptidase family M16) K07263 - - 4.233e-218 716.0
SYD3_k127_1676808_3 NapC/NirT cytochrome c family, N-terminal region - GO:0003674,GO:0003824,GO:0005575,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0044237,GO:0044425,GO:0045333,GO:0055114 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008416 536.0
SYD3_k127_1676808_4 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 430.0
SYD3_k127_1676808_5 Trypsin K08070 - 1.3.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 378.0
SYD3_k127_1676808_6 formate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004569 312.0
SYD3_k127_1676808_7 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002617 264.0
SYD3_k127_1676808_8 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 - 1.7.1.13 0.00000000000000000000000000000000000000000000000004323 192.0
SYD3_k127_1676808_9 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000009585 188.0
SYD3_k127_1698457_0 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 574.0
SYD3_k127_1698457_1 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005542 556.0
SYD3_k127_1698457_10 Histidine kinase A domain protein K03407 - 2.7.13.3 0.0000000000000000000000000000291 137.0
SYD3_k127_1698457_12 ATP synthase F(0) sector subunit b K02109 - - 0.000000000000000000002144 101.0
SYD3_k127_1698457_13 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000682 94.0
SYD3_k127_1698457_14 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.00000000004445 66.0
SYD3_k127_1698457_15 His Kinase A (phosphoacceptor) domain K10942 - 2.7.13.3 0.00000028 64.0
SYD3_k127_1698457_16 NHL repeat - - - 0.000006483 59.0
SYD3_k127_1698457_17 STAS domain - - - 0.0000253 57.0
SYD3_k127_1698457_2 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001124 269.0
SYD3_k127_1698457_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000001561 255.0
SYD3_k127_1698457_4 PFAM peptidase T2 asparaginase 2 K13051 - 3.4.19.5 0.0000000000000000000000000000000000000000000000000000000000000000000001585 259.0
SYD3_k127_1698457_5 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000002246 270.0
SYD3_k127_1698457_6 Small GTP-binding protein K06883 - - 0.000000000000000000000000000000000000000002049 180.0
SYD3_k127_1698457_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000004799 136.0
SYD3_k127_1698457_8 cheY-homologous receiver domain - - - 0.000000000000000000000000000003366 138.0
SYD3_k127_1698457_9 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000000001854 133.0
SYD3_k127_1735904_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 549.0
SYD3_k127_1735904_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000002466 143.0
SYD3_k127_1735904_2 Activates the tRNA-splicing ligase complex by facilitating the enzymatic turnover of catalytic subunit RtcB. Acts by promoting the guanylylation of RtcB, a key intermediate step in tRNA ligation. Can also alter the NTP specificity of RtcB such that ATP, dGTP or ITP is used efficiently - GO:0000394,GO:0003674,GO:0005488,GO:0005509,GO:0006139,GO:0006388,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:1901360 - 0.00000001135 62.0
SYD3_k127_1737776_1 amino acid activation for nonribosomal peptide biosynthetic process K17713 - - 0.0000000000000000000000000000000000000000000000001071 193.0
SYD3_k127_1755238_0 CobW/HypB/UreG, nucleotide-binding domain - - - 1.19e-199 633.0
SYD3_k127_1755238_1 Saccharopine dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009809 382.0
SYD3_k127_1755238_2 TonB C terminal K03832 - - 0.0000000000000002503 90.0
SYD3_k127_1756927_0 Carbon starvation protein K06200 - - 2.389e-203 655.0
SYD3_k127_1756927_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535 574.0
SYD3_k127_1756927_10 Predicted membrane protein (DUF2231) - - - 0.0000000696 59.0
SYD3_k127_1756927_2 Beta-Casp domain K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009087 477.0
SYD3_k127_1756927_3 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 447.0
SYD3_k127_1756927_4 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 329.0
SYD3_k127_1756927_5 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001103 255.0
SYD3_k127_1756927_6 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000002212 246.0
SYD3_k127_1756927_7 Universal stress protein - - - 0.0000000000000000007235 93.0
SYD3_k127_1756927_8 PFAM cyclic nucleotide-binding - - - 0.0000000000001624 78.0
SYD3_k127_1756927_9 Contains selenocysteine K07401 - - 0.0000000000009565 69.0
SYD3_k127_1765909_0 ATPase associated with various cellular activities, AAA_5 K02584 - - 4.552e-261 826.0
SYD3_k127_1765909_1 L-lysine 6-monooxygenase (NADPH-requiring) K07222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 576.0
SYD3_k127_1765909_10 PFAM NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000005752 250.0
SYD3_k127_1765909_11 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000002978 247.0
SYD3_k127_1765909_12 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000001227 214.0
SYD3_k127_1765909_13 ankyrin 3, node of Ranvier (ankyrin G) - - - 0.00000000000000000000000000000000000000000000002189 194.0
SYD3_k127_1765909_14 FR47-like protein - - - 0.00000000000000000000000000000000000000003419 161.0
SYD3_k127_1765909_15 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000023 145.0
SYD3_k127_1765909_16 oligosaccharyl transferase activity - - - 0.00000000000000000001518 106.0
SYD3_k127_1765909_18 cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.00000004451 64.0
SYD3_k127_1765909_19 Periplasmic copper-binding protein (NosD) - - - 0.0000005128 62.0
SYD3_k127_1765909_2 cystathionine gamma-synthase activity K01758,K01760,K01761 - 4.4.1.1,4.4.1.11,4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 437.0
SYD3_k127_1765909_20 PFAM Hemolysin-type calcium-binding repeat (2 copies) - - - 0.0000005128 62.0
SYD3_k127_1765909_21 Thioredoxin-like - - - 0.000001064 52.0
SYD3_k127_1765909_3 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 431.0
SYD3_k127_1765909_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004074 377.0
SYD3_k127_1765909_5 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003912 370.0
SYD3_k127_1765909_6 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 353.0
SYD3_k127_1765909_7 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005812 350.0
SYD3_k127_1765909_8 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007002 293.0
SYD3_k127_1765909_9 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007316 307.0
SYD3_k127_1770372_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1242.0
SYD3_k127_1770372_1 Heparinase II/III N-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004428 429.0
SYD3_k127_1770372_10 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000002095 168.0
SYD3_k127_1770372_11 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000000003375 157.0
SYD3_k127_1770372_12 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000003358 132.0
SYD3_k127_1770372_13 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000002341 125.0
SYD3_k127_1770372_15 PilZ domain - - - 0.00000000000003012 85.0
SYD3_k127_1770372_16 Exonuclease VII small subunit K03602 - 3.1.11.6 0.00000000004232 64.0
SYD3_k127_1770372_17 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.00000001249 57.0
SYD3_k127_1770372_18 Response regulator receiver - - - 0.00000001588 63.0
SYD3_k127_1770372_19 Serine aminopeptidase, S33 - - - 0.000003204 58.0
SYD3_k127_1770372_2 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007228 421.0
SYD3_k127_1770372_3 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 385.0
SYD3_k127_1770372_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007399 306.0
SYD3_k127_1770372_5 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 306.0
SYD3_k127_1770372_6 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001311 284.0
SYD3_k127_1770372_7 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002913 273.0
SYD3_k127_1770372_8 Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs K05544 - 1.3.1.89 0.00000000000000000000000000000000000000000000000000000000000000000000001188 257.0
SYD3_k127_1770372_9 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K15396 - 2.1.1.200 0.000000000000000000000000000000000000000005525 172.0
SYD3_k127_1813814_0 PFAM Conserved region in glutamate synthase K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.0 1255.0
SYD3_k127_1813814_1 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 6.061e-262 860.0
SYD3_k127_1813814_10 cellulase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 429.0
SYD3_k127_1813814_11 Fatty acid desaturase K00508 - 1.14.19.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 363.0
SYD3_k127_1813814_12 Endonuclease exonuclease phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005535 282.0
SYD3_k127_1813814_13 FAD dependent oxidoreductase K00303 - 1.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000553 274.0
SYD3_k127_1813814_14 PFAM DAHP synthetase I K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000002701 269.0
SYD3_k127_1813814_15 PFAM Transposase IS200 like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009148 252.0
SYD3_k127_1813814_16 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000000000000000000000000000000386 227.0
SYD3_k127_1813814_17 Aminoacyl-tRNA editing domain K19055 - - 0.000000000000000000000000000000000000000000000000000004685 202.0
SYD3_k127_1813814_18 SMART Tetratricopeptide - - - 0.000000000000000000000000000000000000000000000000000005041 214.0
SYD3_k127_1813814_19 exo-alpha-(2->6)-sialidase activity K01406 - 3.4.24.40 0.000000000000000000000000000000000000000000000000001131 211.0
SYD3_k127_1813814_2 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004207 574.0
SYD3_k127_1813814_20 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000001213 150.0
SYD3_k127_1813814_21 Peptidase family M28 - - - 0.0000000000000000000000000000000003049 153.0
SYD3_k127_1813814_22 COG0451 Nucleoside-diphosphate-sugar epimerases - - - 0.0000000000000000000000000000002003 140.0
SYD3_k127_1813814_23 Subtilase family - - - 0.00000000000000000000000000003529 136.0
SYD3_k127_1813814_24 Cartilage oligomeric matrix protein K04659 GO:0000902,GO:0001501,GO:0001503,GO:0001932,GO:0001934,GO:0001936,GO:0001938,GO:0001968,GO:0002020,GO:0002682,GO:0002684,GO:0002685,GO:0002687,GO:0002688,GO:0002690,GO:0003416,GO:0003417,GO:0003674,GO:0005102,GO:0005178,GO:0005198,GO:0005201,GO:0005488,GO:0005496,GO:0005499,GO:0005509,GO:0005515,GO:0005518,GO:0005539,GO:0005575,GO:0005576,GO:0005604,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005912,GO:0005924,GO:0005927,GO:0006928,GO:0006950,GO:0007155,GO:0007160,GO:0007275,GO:0007399,GO:0007517,GO:0007610,GO:0008150,GO:0008201,GO:0008284,GO:0008289,GO:0009653,GO:0009790,GO:0009887,GO:0009888,GO:0009893,GO:0009987,GO:0010562,GO:0010604,GO:0010941,GO:0012505,GO:0014812,GO:0016043,GO:0016203,GO:0016477,GO:0016525,GO:0016528,GO:0016529,GO:0019220,GO:0019222,GO:0019842,GO:0019899,GO:0021700,GO:0022008,GO:0022603,GO:0022607,GO:0022610,GO:0030030,GO:0030054,GO:0030055,GO:0030154,GO:0030182,GO:0030198,GO:0030334,GO:0030335,GO:0030855,GO:0031012,GO:0031175,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031589,GO:0031594,GO:0032101,GO:0032103,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032879,GO:0032989,GO:0032990,GO:0032991,GO:0033554,GO:0033555,GO:0033627,GO:0034103,GO:0034976,GO:0035265,GO:0035989,GO:0036094,GO:0040007,GO:0040011,GO:0040012,GO:0040017,GO:0042127,GO:0042325,GO:0042327,GO:0042981,GO:0043062,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043236,GO:0043237,GO:0043394,GO:0043395,GO:0043931,GO:0043933,GO:0044085,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045202,GO:0045765,GO:0045937,GO:0046872,GO:0048265,GO:0048266,GO:0048468,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048589,GO:0048646,GO:0048666,GO:0048699,GO:0048705,GO:0048731,GO:0048736,GO:0048799,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050678,GO:0050679,GO:0050730,GO:0050731,GO:0050789,GO:0050793,GO:0050794,GO:0050839,GO:0050840,GO:0050896,GO:0050920,GO:0050921,GO:0051093,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051216,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051270,GO:0051272,GO:0051451,GO:0051674,GO:0051716,GO:0060173,GO:0060231,GO:0060255,GO:0060343,GO:0060346,GO:0060348,GO:0060349,GO:0060350,GO:0060351,GO:0060429,GO:0060538,GO:0060548,GO:0061053,GO:0061061,GO:0061383,GO:0061430,GO:0061448,GO:0062023,GO:0065003,GO:0065007,GO:0070161,GO:0070977,GO:0071603,GO:0071622,GO:0071624,GO:0071695,GO:0071840,GO:0080090,GO:0090022,GO:0090023,GO:0090136,GO:0097159,GO:0097367,GO:0098609,GO:0098868,GO:0120036,GO:0120039,GO:1901342,GO:1901343,GO:1901681,GO:1902622,GO:1902624,GO:2000026,GO:2000145,GO:2000147,GO:2000181 - 0.00000000000000000000000000004807 136.0
SYD3_k127_1813814_25 - - - - 0.000000000000000000000000003753 128.0
SYD3_k127_1813814_26 Peptidase family M1 domain K01256 - 3.4.11.2 0.0000000000000000000000004026 123.0
SYD3_k127_1813814_27 4'-phosphopantetheinyl transferase superfamily K00997 - 2.7.8.7 0.000000000000000000000003807 107.0
SYD3_k127_1813814_29 Multicopper oxidase - - - 0.00000000000000002038 98.0
SYD3_k127_1813814_3 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000043 485.0
SYD3_k127_1813814_30 Subtilase family - - - 0.0000000000000003435 94.0
SYD3_k127_1813814_31 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.00000000000008561 79.0
SYD3_k127_1813814_32 Fibronectin type 3 domain - - - 0.0000000005378 74.0
SYD3_k127_1813814_33 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.000000002916 70.0
SYD3_k127_1813814_34 acyl carrier protein - - - 0.000000006133 63.0
SYD3_k127_1813814_35 - - - - 0.000000009261 61.0
SYD3_k127_1813814_36 Protein of unknown function (DUF1571) - - - 0.000005767 57.0
SYD3_k127_1813814_38 Domain of unknown function (DUF4082) - - - 0.0003823 55.0
SYD3_k127_1813814_39 Belongs to the glycosyl hydrolase 43 family K20276 - - 0.0005614 53.0
SYD3_k127_1813814_4 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002931 511.0
SYD3_k127_1813814_5 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 445.0
SYD3_k127_1813814_6 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003658 424.0
SYD3_k127_1813814_7 cellulase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005524 464.0
SYD3_k127_1813814_8 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004144 446.0
SYD3_k127_1813814_9 geranylgeranyl reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004837 419.0
SYD3_k127_196284_0 - - - - 0.000000000000000000000000000000000000000000000000000000000008167 210.0
SYD3_k127_196284_1 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000009793 76.0
SYD3_k127_2065663_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1007.0
SYD3_k127_2065663_1 Membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 353.0
SYD3_k127_2065663_2 asparaginyl-tRNA synthetase K01893 - 6.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000526 320.0
SYD3_k127_2077983_0 Cys/Met metabolism PLP-dependent enzyme K01760,K17217 - 4.4.1.1,4.4.1.2,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 458.0
SYD3_k127_2077983_1 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 340.0
SYD3_k127_2104725_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000001741 146.0
SYD3_k127_2108469_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004941 434.0
SYD3_k127_2289936_0 Belongs to the ClpA ClpB family K03694 - - 3.972e-261 824.0
SYD3_k127_2289936_1 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 9.636e-237 743.0
SYD3_k127_2289936_2 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01885,K01894 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 307.0
SYD3_k127_2289936_3 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000003157 180.0
SYD3_k127_2289936_4 EamA-like transporter family - - - 0.0000000000000000000000000000000000002089 154.0
SYD3_k127_2289936_5 ATP-dependent Clp protease adaptor protein ClpS K06891 - - 0.000000000000000000000000000001045 123.0
SYD3_k127_2289936_6 Cysteine-rich secretory protein family - - - 0.000000000000000000000000004612 122.0
SYD3_k127_2301347_0 nitrite transmembrane transporter activity - - - 1.143e-311 984.0
SYD3_k127_2301347_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 3.681e-286 900.0
SYD3_k127_2301347_2 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003101 284.0
SYD3_k127_2301347_3 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000000000000000000000002035 209.0
SYD3_k127_2301347_4 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.000000000000000000000000000000000003158 160.0
SYD3_k127_2301347_5 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000003073 139.0
SYD3_k127_2301347_6 HD domain - - - 0.00000000000000000000000000001118 125.0
SYD3_k127_2301347_7 PFAM 4Fe-4S ferredoxin iron-sulfur binding - - - 0.000000002064 63.0
SYD3_k127_230540_0 PFAM Na-Ca exchanger integrin-beta4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000718 385.0
SYD3_k127_230540_1 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000000000000000000000000000000000000000000000000000001761 250.0
SYD3_k127_230540_2 Glyoxalase-like domain K07032 - - 0.000000000000000000000000000000000000000000000000000002672 196.0
SYD3_k127_230540_3 regulation of DNA-templated transcription, elongation - - - 0.00000000000000000000000000000000000000000001035 177.0
SYD3_k127_230540_4 Multicopper oxidase K04753 - - 0.00000000000000000000000000000003009 147.0
SYD3_k127_230540_5 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000000005958 96.0
SYD3_k127_230540_6 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K05970 - 3.1.1.53 0.0000000004111 74.0
SYD3_k127_230540_7 Putative metal-binding motif - - - 0.0005504 52.0
SYD3_k127_2353573_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 1.543e-253 803.0
SYD3_k127_2353573_1 Alpha/beta hydrolase family - - - 6.62e-230 730.0
SYD3_k127_2353573_2 Uncharacterised conserved protein (DUF2156) K07027,K14205 - 2.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009963 387.0
SYD3_k127_2353573_3 PFAM virulence factor family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009477 308.0
SYD3_k127_2353573_4 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000003154 208.0
SYD3_k127_2353573_5 Putative esterase K07214 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0008150,GO:0008152,GO:0008849,GO:0009056,GO:0009237,GO:0009238,GO:0009712,GO:0009987,GO:0016787,GO:0016788,GO:0018958,GO:0019336,GO:0019439,GO:0019614,GO:0019748,GO:0044237,GO:0044248,GO:0044424,GO:0044464,GO:0046214,GO:0046215,GO:0046483,GO:0046700,GO:0051186,GO:0051187,GO:0071704,GO:0090487,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616 - 0.00000000000000000000000000000000000000000000000000000154 218.0
SYD3_k127_2353573_6 - - - - 0.00000000000000000000003905 106.0
SYD3_k127_2353573_7 PFAM virulence factor family protein - - - 0.000000000000006727 84.0
SYD3_k127_2353573_9 Glucose / Sorbosone dehydrogenase - - - 0.000006483 55.0
SYD3_k127_2393050_0 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 396.0
SYD3_k127_2393050_1 Phage integrase, N-terminal SAM-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006294 395.0
SYD3_k127_2393050_2 Protein-disulfide isomerase - - - 0.000000000000000000000000000000000000000002699 159.0
SYD3_k127_2399551_0 cellulose binding - - - 8.924e-299 947.0
SYD3_k127_2399551_1 Insulinase (Peptidase family M16) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 559.0
SYD3_k127_2399551_10 Domain of unknown function (DUF4129) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001366 286.0
SYD3_k127_2399551_11 ATPase activity K01990,K13926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001664 299.0
SYD3_k127_2399551_12 Phosphoglycerate mutase family K02226 - 3.1.3.73 0.00000000000000000000000000000000000000000000000000000000000000000000000001647 257.0
SYD3_k127_2399551_13 PFAM von Willebrand factor type A K01337 - 3.4.21.50 0.00000000000000000000000000000000000000000000000000000000000000000000000007912 278.0
SYD3_k127_2399551_14 Membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003978 263.0
SYD3_k127_2399551_15 membrane protein domain - - - 0.000000000000000000000000000000000000000000000000000000009797 211.0
SYD3_k127_2399551_16 PFAM secretion protein HlyD family protein K01993 - - 0.000000000000000000000000000000000000000000000001073 186.0
SYD3_k127_2399551_17 Lysin motif K06194 - - 0.0000000000000000000000000000000000000001162 162.0
SYD3_k127_2399551_18 phosphatase activity K07025 - - 0.000000000000000000000000000000398 133.0
SYD3_k127_2399551_19 Outer membrane efflux protein - - - 0.000000000000000000000000000007623 136.0
SYD3_k127_2399551_2 Peptidase M16 inactive domain K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 557.0
SYD3_k127_2399551_20 Membrane - - - 0.00000000000000000000000000004876 136.0
SYD3_k127_2399551_21 transcriptional regulator K09017 - - 0.000000000000000001503 94.0
SYD3_k127_2399551_22 - - - - 0.0000000000000006589 88.0
SYD3_k127_2399551_23 - - - - 0.00000000000001971 85.0
SYD3_k127_2399551_24 COG0518 GMP synthase - Glutamine amidotransferase domain K01951 - 6.3.5.2 0.0000000000001449 83.0
SYD3_k127_2399551_25 PhoR family transcriptional regulator - - - 0.000002614 59.0
SYD3_k127_2399551_26 Belongs to the UPF0637 family - - - 0.00005279 54.0
SYD3_k127_2399551_27 Thioredoxin-like - - - 0.00008441 56.0
SYD3_k127_2399551_28 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0003618 51.0
SYD3_k127_2399551_29 - - - - 0.0007329 49.0
SYD3_k127_2399551_3 Sodium/calcium exchanger protein K07300 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007552 475.0
SYD3_k127_2399551_4 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 393.0
SYD3_k127_2399551_5 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007862 357.0
SYD3_k127_2399551_6 PFAM ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 331.0
SYD3_k127_2399551_7 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002847 322.0
SYD3_k127_2399551_8 PFAM ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006236 318.0
SYD3_k127_2399551_9 transport, permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 313.0
SYD3_k127_2456945_0 AlkA N-terminal domain K13529,K13530 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 549.0
SYD3_k127_2456945_1 Peptidase M64 N-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 513.0
SYD3_k127_2456945_10 Esterase of the alpha-beta hydrolase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000001482 220.0
SYD3_k127_2456945_11 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.0000000000000000000000000000000000000000000000000000000004147 231.0
SYD3_k127_2456945_13 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.000000000000000000000000000000000000000000005792 185.0
SYD3_k127_2456945_14 Cupin domain - - - 0.0000000000000000000000000000000000000000006578 165.0
SYD3_k127_2456945_15 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.00000000000000000000000000000000000000001386 161.0
SYD3_k127_2456945_16 Yqey-like protein K09117 - - 0.000000000000000000000000000000000003058 142.0
SYD3_k127_2456945_17 PFAM Transposase IS200 like - - - 0.00000000000000000000000000000005938 137.0
SYD3_k127_2456945_18 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000005512 128.0
SYD3_k127_2456945_19 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000005965 124.0
SYD3_k127_2456945_2 FAD dependent oxidoreductase K00285 - 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 429.0
SYD3_k127_2456945_20 Involved in the tonB-independent uptake of proteins K03641 - - 0.0000000000000000000000000004977 132.0
SYD3_k127_2456945_21 - - - - 0.0000000000000000000000000006323 124.0
SYD3_k127_2456945_22 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000000000007301 103.0
SYD3_k127_2456945_24 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.000000000009172 66.0
SYD3_k127_2456945_25 - - - - 0.0000000001246 74.0
SYD3_k127_2456945_26 Glycosyl transferase family 41 - - - 0.0000000006109 71.0
SYD3_k127_2456945_27 Gram-negative bacterial TonB protein C-terminal - - - 0.0000000008705 71.0
SYD3_k127_2456945_28 Sigma-70, region 4 K03088 - - 0.000000004261 65.0
SYD3_k127_2456945_29 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source - - - 0.000000004871 61.0
SYD3_k127_2456945_3 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 452.0
SYD3_k127_2456945_30 - - - - 0.00000006368 64.0
SYD3_k127_2456945_31 - - - - 0.000000264 61.0
SYD3_k127_2456945_32 Plasmid stability protein K21495 - - 0.00005842 50.0
SYD3_k127_2456945_4 PFAM RNA binding S1 domain protein K02945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 350.0
SYD3_k127_2456945_5 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 329.0
SYD3_k127_2456945_6 PFAM peptidase S1 and S6 chymotrypsin Hap - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008062 338.0
SYD3_k127_2456945_7 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 324.0
SYD3_k127_2456945_8 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009005 323.0
SYD3_k127_2456945_9 molybdenum ion binding K07140 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007044 256.0
SYD3_k127_2562333_0 Belongs to the thiolase family K00626 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.9 0.0000000000000000000000000000000000000000000000000000009585 195.0
SYD3_k127_2562333_1 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000004316 206.0
SYD3_k127_2562333_2 Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation K07130 GO:0003674,GO:0003824,GO:0004061,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.00000000000000000000000000000000005879 144.0
SYD3_k127_2576_0 Amidohydrolase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 484.0
SYD3_k127_2576_1 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0003824,GO:0004109,GO:0005488,GO:0005515,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0016634,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042802,GO:0042803,GO:0044237,GO:0044249,GO:0044271,GO:0046483,GO:0046983,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 478.0
SYD3_k127_2576_10 - - - - 0.00000000000000000005047 102.0
SYD3_k127_2576_11 membrane K08988 - - 0.00000001251 64.0
SYD3_k127_2576_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 334.0
SYD3_k127_2576_3 L-threonylcarbamoyladenylate synthase K07566 GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001297 290.0
SYD3_k127_2576_4 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008329 267.0
SYD3_k127_2576_5 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.0000000000000000000000000000000000000000000000000000000000000005074 233.0
SYD3_k127_2576_6 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000005098 230.0
SYD3_k127_2576_7 Tim44 K15539 - - 0.000000000000000000000000000000000000000000000000000000005396 223.0
SYD3_k127_2576_8 PFAM Calcineurin-like phosphoesterase K07098 - - 0.0000000000000000000000000000000002081 144.0
SYD3_k127_2576_9 phosphohistidine phosphatase, SixA K08296 - - 0.000000000000000000000000000002628 126.0
SYD3_k127_2693056_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007826 559.0
SYD3_k127_2693056_1 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 420.0
SYD3_k127_2693056_10 - - - - 0.0001222 46.0
SYD3_k127_2693056_2 PFAM Aldo keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 354.0
SYD3_k127_2693056_3 Arsenical pump membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001682 283.0
SYD3_k127_2693056_4 GHMP kinases C terminal K07031 - 2.7.1.168 0.0000000000000000000000000000000000000000000000000003119 203.0
SYD3_k127_2693056_5 NUDIX domain - - - 0.00000000000000000000000000000000000000002955 173.0
SYD3_k127_2693056_6 Belongs to the UPF0200 family - - - 0.000000000000000000002581 107.0
SYD3_k127_2693056_7 BAAT / Acyl-CoA thioester hydrolase C terminal - - - 0.000000000000000007402 95.0
SYD3_k127_2693056_8 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000002462 64.0
SYD3_k127_2719_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 2.448e-221 722.0
SYD3_k127_2719_1 SMART PDZ DHR GLGF domain protein - - - 3.154e-207 662.0
SYD3_k127_2719_10 PFAM filamentation induced by cAMP protein Fic - - - 0.000000000000000000000000000000000000000000000000000000000249 216.0
SYD3_k127_2719_11 MotA TolQ ExbB proton channel K03561,K03562 - - 0.0000000000000000000000000000000000000000000000000004554 202.0
SYD3_k127_2719_12 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000006221 209.0
SYD3_k127_2719_13 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.00000000000000000000000000000000000000004755 156.0
SYD3_k127_2719_14 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000000000000000000004672 143.0
SYD3_k127_2719_15 Tetratricopeptide repeat - - - 0.00000000000000000000004637 110.0
SYD3_k127_2719_16 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.000000000000000000001735 98.0
SYD3_k127_2719_17 energy transducer activity K03646,K03832 - - 0.00000000001283 74.0
SYD3_k127_2719_18 BlaR1 peptidase M56 - - - 0.00000000712 68.0
SYD3_k127_2719_19 signal transduction histidine kinase - - - 0.0000001177 61.0
SYD3_k127_2719_2 Response regulator receiver modulated diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 612.0
SYD3_k127_2719_20 PilZ domain - - - 0.0001138 53.0
SYD3_k127_2719_21 Belongs to the peptidase M10A family - - - 0.0004221 50.0
SYD3_k127_2719_3 Acetyl-coenzyme A transporter 1 K08218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005641 595.0
SYD3_k127_2719_4 Formiminotransferase-cyclodeaminase K00603,K13990 - 2.1.2.5,4.3.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 597.0
SYD3_k127_2719_5 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 467.0
SYD3_k127_2719_6 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 437.0
SYD3_k127_2719_7 Protein of unknown function (DUF1015) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000891 424.0
SYD3_k127_2719_8 asparaginase K01424,K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.1,3.5.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004547 417.0
SYD3_k127_2719_9 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01885,K01894 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 354.0
SYD3_k127_2762741_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 394.0
SYD3_k127_2762741_1 Pkd domain containing protein - - - 0.000000006452 66.0
SYD3_k127_2764233_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 5.546e-205 679.0
SYD3_k127_2764233_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 541.0
SYD3_k127_2764233_10 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 312.0
SYD3_k127_2764233_11 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002309 296.0
SYD3_k127_2764233_12 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001869 277.0
SYD3_k127_2764233_13 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000276 266.0
SYD3_k127_2764233_14 PFAM cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000002627 269.0
SYD3_k127_2764233_15 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002878 240.0
SYD3_k127_2764233_16 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000001554 237.0
SYD3_k127_2764233_17 ABC transporter K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000002052 217.0
SYD3_k127_2764233_18 phosphotransferase related to Ser Thr protein kinases K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000001286 193.0
SYD3_k127_2764233_19 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000001843 176.0
SYD3_k127_2764233_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0030554,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 492.0
SYD3_k127_2764233_20 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000002062 165.0
SYD3_k127_2764233_21 creatininase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000289 161.0
SYD3_k127_2764233_22 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000000000000000003611 158.0
SYD3_k127_2764233_23 PFAM Mur ligase family, glutamate ligase domain K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000129 172.0
SYD3_k127_2764233_24 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000001577 167.0
SYD3_k127_2764233_25 Peptidase U62 modulator of DNA gyrase K03568 - - 0.00000000000000000000000000000000000002518 167.0
SYD3_k127_2764233_26 Nucleotidyl transferase K00966,K16881 - 2.7.7.13,5.4.2.8 0.00000000000000000000000000000000007613 156.0
SYD3_k127_2764233_27 TonB dependent receptor K02014 - - 0.000000000000000000000000000002331 139.0
SYD3_k127_2764233_28 CYTH K05873 - 4.6.1.1 0.00000000000000000000000000005335 125.0
SYD3_k127_2764233_29 COGs COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family - - - 0.00000000000000000000000002567 126.0
SYD3_k127_2764233_3 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 410.0
SYD3_k127_2764233_30 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.00000000000000000003489 107.0
SYD3_k127_2764233_31 Response regulator receiver - - - 0.0000000000002735 80.0
SYD3_k127_2764233_32 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000005027 70.0
SYD3_k127_2764233_33 POTRA domain, FtsQ-type K03589 - - 0.00000005943 66.0
SYD3_k127_2764233_34 transcriptional regulator, SARP family - - - 0.0000002837 63.0
SYD3_k127_2764233_4 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004565 404.0
SYD3_k127_2764233_5 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007473 424.0
SYD3_k127_2764233_6 Penicillin-binding protein, transpeptidase domain protein K03587,K08384 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003333 400.0
SYD3_k127_2764233_7 to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004658 405.0
SYD3_k127_2764233_8 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 353.0
SYD3_k127_2764233_9 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 352.0
SYD3_k127_2766664_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 1.205e-248 783.0
SYD3_k127_2766664_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 452.0
SYD3_k127_2766664_10 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000005772 248.0
SYD3_k127_2766664_11 rRNA methylase K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000001399 237.0
SYD3_k127_2766664_12 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000369 141.0
SYD3_k127_2766664_13 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.00000000000000004249 96.0
SYD3_k127_2766664_14 - - - - 0.0000000006673 72.0
SYD3_k127_2766664_15 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000297 62.0
SYD3_k127_2766664_2 TIGRFAM carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000637 434.0
SYD3_k127_2766664_3 NeuB family K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009123 420.0
SYD3_k127_2766664_4 Endoribonuclease that initiates mRNA decay K18682 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006127 380.0
SYD3_k127_2766664_5 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 366.0
SYD3_k127_2766664_6 metallophosphoesterase K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009868 295.0
SYD3_k127_2766664_7 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006286 277.0
SYD3_k127_2766664_8 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000002453 266.0
SYD3_k127_2766664_9 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000048 264.0
SYD3_k127_2769444_0 Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008267 582.0
SYD3_k127_2769444_1 cell shape determining protein MreB K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 541.0
SYD3_k127_2769444_10 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.000000000000000000000000000000000000000000008176 168.0
SYD3_k127_2769444_11 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000001059 131.0
SYD3_k127_2769444_12 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000001757 135.0
SYD3_k127_2769444_13 Protein of unknown function (DUF3467) - - - 0.0000000000000000001623 91.0
SYD3_k127_2769444_14 peptidyl-tyrosine sulfation - - - 0.0000000000000025 83.0
SYD3_k127_2769444_15 response regulator, receiver - - - 0.00000000000006813 79.0
SYD3_k127_2769444_16 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.0000000000004127 83.0
SYD3_k127_2769444_17 FecR protein - - - 0.000000247 63.0
SYD3_k127_2769444_18 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00001034 56.0
SYD3_k127_2769444_2 Belongs to the aldehyde dehydrogenase family K00128,K09472 - 1.2.1.3,1.2.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 511.0
SYD3_k127_2769444_3 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 468.0
SYD3_k127_2769444_4 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 415.0
SYD3_k127_2769444_5 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 365.0
SYD3_k127_2769444_6 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 365.0
SYD3_k127_2769444_7 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 299.0
SYD3_k127_2769444_8 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005399 290.0
SYD3_k127_2769444_9 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000002488 224.0
SYD3_k127_2796118_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 5e-324 1004.0
SYD3_k127_2796118_1 FAD linked oxidases, C-terminal domain K18930 - - 1.62e-321 1012.0
SYD3_k127_2796118_10 Acyl-transferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000005192 157.0
SYD3_k127_2796118_11 AAA domain - - - 0.00000000000000000000000000000000003646 139.0
SYD3_k127_2796118_13 guanyl-nucleotide exchange factor activity - - - 0.000000000000000000695 102.0
SYD3_k127_2796118_14 Bacterial Ig-like domain (group 1) - - - 0.0000000000000003763 96.0
SYD3_k127_2796118_15 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000001533 91.0
SYD3_k127_2796118_2 Malate synthase K01638 - 2.3.3.9 6.607e-238 746.0
SYD3_k127_2796118_3 Phosphoenolpyruvate phosphomutase K01637 - 4.1.3.1 1.348e-208 656.0
SYD3_k127_2796118_4 IrrE N-terminal-like domain K07110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009319 465.0
SYD3_k127_2796118_5 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 429.0
SYD3_k127_2796118_6 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 361.0
SYD3_k127_2796118_7 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000006596 248.0
SYD3_k127_2796118_8 Glutamine synthetase type III K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000003425 211.0
SYD3_k127_2796118_9 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000000002779 165.0
SYD3_k127_2801132_0 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 1.642e-210 699.0
SYD3_k127_2801132_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009523 580.0
SYD3_k127_2801132_2 SMART Tetratricopeptide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 407.0
SYD3_k127_2801132_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000007465 228.0
SYD3_k127_2801132_4 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000000000000000000000000000000000246 195.0
SYD3_k127_2801132_5 Iron-storage protein K02217 - 1.16.3.2 0.000000000000000000000000000000000000004025 154.0
SYD3_k127_2801132_6 Di-iron-containing protein involved in the repair of iron-sulfur clusters - - - 0.000000000000000000000000000000000005711 143.0
SYD3_k127_2801132_7 - - - - 0.0000000000000000000006421 104.0
SYD3_k127_2801132_8 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source K10778 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040008,GO:0044464,GO:0045927,GO:0048518,GO:0050789,GO:0065007,GO:0071944 2.1.1.63 0.00000000000001223 76.0
SYD3_k127_2809398_0 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004375 532.0
SYD3_k127_2809398_1 PFAM lipopolysaccharide biosynthesis protein K16692 - - 0.0000000000000001584 89.0
SYD3_k127_2845355_0 Insulinase (Peptidase family M16) K07263 - - 0.0 1135.0
SYD3_k127_2845355_1 Belongs to the peptidase S16 family K01338,K04076,K04770 - 3.4.21.53 1.218e-219 711.0
SYD3_k127_2845355_10 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000001113 108.0
SYD3_k127_2845355_11 Bacterial membrane protein YfhO - - - 0.000002873 61.0
SYD3_k127_2845355_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 570.0
SYD3_k127_2845355_3 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008657 475.0
SYD3_k127_2845355_4 ROK family K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007659 411.0
SYD3_k127_2845355_5 Aldo/keto reductase family K05882 - 1.1.1.91 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 411.0
SYD3_k127_2845355_6 PFAM Integral membrane protein TerC K05794 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 391.0
SYD3_k127_2845355_7 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009364 370.0
SYD3_k127_2845355_8 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000005096 259.0
SYD3_k127_2845355_9 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000003966 234.0
SYD3_k127_287804_0 pilus assembly protein K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 491.0
SYD3_k127_287804_1 type IV pilus secretin PilQ K02666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003306 294.0
SYD3_k127_287804_2 Type II secretion system (T2SS), protein M subtype b K02664 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 282.0
SYD3_k127_287804_3 Fimbrial assembly protein (PilN) K02663 - - 0.000000000000000000000000000000000000000000000000000000000003892 226.0
SYD3_k127_287804_4 Pilus assembly protein, PilP K02665 - - 0.0000000000000000000000000000000000000000000000000000000002927 224.0
SYD3_k127_2894710_0 coagulation factor 5 8 type - - - 5.85e-289 932.0
SYD3_k127_2894710_1 Putative glucoamylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009875 578.0
SYD3_k127_2894710_10 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 302.0
SYD3_k127_2894710_11 Penicillin binding protein transpeptidase domain K17838 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000002473 221.0
SYD3_k127_2894710_12 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000004315 171.0
SYD3_k127_2894710_14 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000005588 74.0
SYD3_k127_2894710_15 toxin-antitoxin pair type II binding - - - 0.0000000003948 70.0
SYD3_k127_2894710_16 COG0457 FOG TPR repeat - - - 0.0002197 54.0
SYD3_k127_2894710_2 ABC transporter substrate-binding protein K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 455.0
SYD3_k127_2894710_3 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 408.0
SYD3_k127_2894710_4 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006849 411.0
SYD3_k127_2894710_5 NAD dependent epimerase/dehydratase family K05281 - 1.3.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 408.0
SYD3_k127_2894710_6 ABC-type sugar transport systems, permease components K02025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005613 392.0
SYD3_k127_2894710_7 DeoC/LacD family aldolase K08321 - 2.3.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 363.0
SYD3_k127_2894710_8 ATP ADP translocase K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 344.0
SYD3_k127_2894710_9 Binding-protein-dependent transport system inner membrane component K05815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005145 342.0
SYD3_k127_2909433_0 Prolyl oligopeptidase family - - - 7.627e-313 977.0
SYD3_k127_2909433_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.498e-238 771.0
SYD3_k127_2909433_10 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 307.0
SYD3_k127_2909433_11 ATPases associated with a variety of cellular activities K02003,K02004 - - 0.000000000000000000000000000000000000000000000000000000000009882 235.0
SYD3_k127_2909433_12 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000003511 201.0
SYD3_k127_2909433_13 Domain of unknown function (DUF4010) - - - 0.0000000000000000000000000000000000000000000000000000001049 219.0
SYD3_k127_2909433_14 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000007455 206.0
SYD3_k127_2909433_15 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000003939 190.0
SYD3_k127_2909433_16 NUDIX domain K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000008418 169.0
SYD3_k127_2909433_17 Methylpurine-DNA glycosylase (MPG) K03652 - 3.2.2.21 0.000000000000000000000000000000000000000001125 172.0
SYD3_k127_2909433_18 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000001688 183.0
SYD3_k127_2909433_19 exonuclease activity K16899 - 3.6.4.12 0.0000000000000000000000000000000003045 153.0
SYD3_k127_2909433_2 OB-fold nucleic acid binding domain K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 591.0
SYD3_k127_2909433_20 glycosyl transferase family K07151 - 2.4.99.18 0.00000000000000000000000002331 124.0
SYD3_k127_2909433_21 Protein of unknown function (DUF1571) - - - 0.0000000000000000001329 101.0
SYD3_k127_2909433_22 Exonuclease VII small subunit K03602 - 3.1.11.6 0.0000000000000000001357 101.0
SYD3_k127_2909433_23 phosphoserine phosphatase K01079 GO:0003674,GO:0003824,GO:0004647,GO:0004721,GO:0004722,GO:0005488,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016597,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0031406,GO:0036094,GO:0036211,GO:0040007,GO:0042578,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564 3.1.3.3 0.000000000001944 77.0
SYD3_k127_2909433_24 FecR protein - - - 0.00001923 57.0
SYD3_k127_2909433_3 Mismatch repair ATPase (MutS family) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 532.0
SYD3_k127_2909433_4 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 516.0
SYD3_k127_2909433_5 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004992 486.0
SYD3_k127_2909433_6 Domain of unknown function (DUF4301) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 444.0
SYD3_k127_2909433_7 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 347.0
SYD3_k127_2909433_8 Predicted membrane protein (DUF2238) K08984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007757 314.0
SYD3_k127_2909433_9 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005169 338.0
SYD3_k127_2931883_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.162e-276 865.0
SYD3_k127_2931883_1 Penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009095 589.0
SYD3_k127_2931883_2 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 360.0
SYD3_k127_2931883_3 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000005978 258.0
SYD3_k127_2931883_4 Biotin/lipoate A/B protein ligase family K03800 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 6.3.1.20 0.000000000000000000000000001496 119.0
SYD3_k127_2931883_6 PA14 domain - - - 0.0000000006977 72.0
SYD3_k127_2931883_7 Putative metal-binding motif - - - 0.0000001453 64.0
SYD3_k127_2931883_8 Methyltransferase domain - - - 0.0000233 58.0
SYD3_k127_2932434_0 Belongs to the aldehyde dehydrogenase family K00128,K00130,K10217 - 1.2.1.3,1.2.1.32,1.2.1.8,1.2.1.85 1.957e-198 642.0
SYD3_k127_2932434_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000029 286.0
SYD3_k127_2932434_2 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006987 297.0
SYD3_k127_2932434_3 Endoribonuclease L-PSP K15067 - 3.5.99.5 0.0000000000000000000000000000000000000000000000000000006926 197.0
SYD3_k127_2932434_4 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000000000000000000000002396 206.0
SYD3_k127_2932434_5 Zn peptidase - - - 0.000000000000000000000000000000000009347 153.0
SYD3_k127_2932434_6 O-methyltransferase - - - 0.000004041 59.0
SYD3_k127_2940275_0 Outer membrane receptor - - - 2.856e-218 726.0
SYD3_k127_2940275_1 glycosyltransferase 36 associated - - - 1.239e-211 683.0
SYD3_k127_2940275_10 PFAM Cellulose synthase operon K20543 - - 0.000000456 63.0
SYD3_k127_2940275_2 COG2723 Beta-glucosidase 6-phospho-beta-glucosidase beta- galactosidase K05350 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006527 603.0
SYD3_k127_2940275_3 Glycosyl transferase family group 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 486.0
SYD3_k127_2940275_4 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009011,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 408.0
SYD3_k127_2940275_5 LacI family K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 344.0
SYD3_k127_2940275_6 TPR repeat - - - 0.000000000000000000000000000000000000000000000000001084 196.0
SYD3_k127_2940275_7 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.000000000000000000000000001651 117.0
SYD3_k127_2940275_8 HEAT repeat - - - 0.000000000000000000009892 107.0
SYD3_k127_2940275_9 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000002795 68.0
SYD3_k127_2956043_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 1.322e-237 752.0
SYD3_k127_2956043_1 Elongator protein 3, MiaB family, Radical SAM K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005149 359.0
SYD3_k127_2956043_10 ADA regulatory protein K00567,K10778 GO:0001130,GO:0003674,GO:0003700,GO:0003824,GO:0003908,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006355,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016740,GO:0016741,GO:0018125,GO:0018193,GO:0018198,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032259,GO:0033554,GO:0034641,GO:0035510,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044728,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0046872,GO:0046914,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070988,GO:0071704,GO:0080090,GO:0080111,GO:0090304,GO:0140110,GO:1901360,GO:1901564,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 2.1.1.63 0.000000000008746 65.0
SYD3_k127_2956043_11 phosphorelay signal transduction system K19622 - - 0.000000001576 69.0
SYD3_k127_2956043_12 dipeptidyl-peptidase K01281 - 3.4.14.11 0.000004022 61.0
SYD3_k127_2956043_13 - - - - 0.00008301 57.0
SYD3_k127_2956043_2 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 372.0
SYD3_k127_2956043_3 Y_Y_Y domain K11527 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002372 309.0
SYD3_k127_2956043_4 Ketopantoate reductase PanE/ApbA C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001162 276.0
SYD3_k127_2956043_5 Memo-like protein K06990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002575 284.0
SYD3_k127_2956043_6 Globin - - - 0.00000000000000000000000000000000000000000005811 164.0
SYD3_k127_2956043_7 Cupin domain - - - 0.0000000000000000000000000000000000000000001689 183.0
SYD3_k127_2956043_8 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000005695 176.0
SYD3_k127_2956043_9 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000006391 116.0
SYD3_k127_2979219_0 MgsA AAA+ ATPase C terminal K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003123 486.0
SYD3_k127_2979219_1 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.000000000000000000000000000000005684 137.0
SYD3_k127_2979219_2 - - - - 0.0000000004093 63.0
SYD3_k127_2979219_3 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00002068 59.0
SYD3_k127_2979219_4 TonB dependent receptor K02014 - - 0.0003683 53.0
SYD3_k127_2996577_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 1.629e-262 837.0
SYD3_k127_2996577_1 Heat shock 70 kDa protein K04043 - - 7.245e-235 742.0
SYD3_k127_2996577_10 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009582 328.0
SYD3_k127_2996577_11 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000059 317.0
SYD3_k127_2996577_12 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 295.0
SYD3_k127_2996577_13 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007666 304.0
SYD3_k127_2996577_14 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004821 277.0
SYD3_k127_2996577_15 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003646 297.0
SYD3_k127_2996577_16 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000329 213.0
SYD3_k127_2996577_17 PFAM MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000002858 178.0
SYD3_k127_2996577_18 Ribosomal protein L11 methyltransferase K02687 - - 0.00000000000000000000000000000000000001331 165.0
SYD3_k127_2996577_19 diguanylate cyclase - - - 0.000000000000000000000000000000000003542 151.0
SYD3_k127_2996577_2 Belongs to the RtcB family K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008805 600.0
SYD3_k127_2996577_20 PFAM OmpA MotB domain protein K03640 - - 0.000000000000000000000000000000000007215 144.0
SYD3_k127_2996577_21 Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000002142 154.0
SYD3_k127_2996577_22 RNA methyltransferase K09761 - 2.1.1.193 0.0000000000000000000000000000000002399 153.0
SYD3_k127_2996577_23 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.00000000000000000000000000000006881 143.0
SYD3_k127_2996577_24 Biopolymer transport protein K03559,K03560 - - 0.0000000000000000000000003879 109.0
SYD3_k127_2996577_25 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000003087 109.0
SYD3_k127_2996577_26 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000001176 115.0
SYD3_k127_2996577_27 IMP dehydrogenase activity K04767,K07182 - - 0.00000000000000000003491 98.0
SYD3_k127_2996577_28 Rhodanese Homology Domain - - - 0.000000000000000000896 96.0
SYD3_k127_2996577_29 Methylamine utilisation protein MauE - - - 0.0000000000000004893 91.0
SYD3_k127_2996577_3 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 527.0
SYD3_k127_2996577_30 Archease protein family (MTH1598/TM1083) - - - 0.00000000001164 79.0
SYD3_k127_2996577_31 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000003584 64.0
SYD3_k127_2996577_32 regulation of DNA repair K03565 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000783 64.0
SYD3_k127_2996577_33 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00001842 54.0
SYD3_k127_2996577_35 TIGRFAM TonB K03832 - - 0.00003207 54.0
SYD3_k127_2996577_4 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 534.0
SYD3_k127_2996577_5 DnaJ central domain K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007565 387.0
SYD3_k127_2996577_6 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 382.0
SYD3_k127_2996577_7 PFAM Band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009828 333.0
SYD3_k127_2996577_8 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004818 341.0
SYD3_k127_2996577_9 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily K01002 - 2.7.8.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007116 353.0
SYD3_k127_3026713_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000639 621.0
SYD3_k127_3026713_1 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 535.0
SYD3_k127_3026713_10 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000001653 247.0
SYD3_k127_3026713_11 transferase activity, transferring glycosyl groups K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000002963 234.0
SYD3_k127_3026713_12 TIGRFAM exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000002334 233.0
SYD3_k127_3026713_13 PFAM Response regulator receiver domain - - - 0.000000000000000000000000000000000000000000000000000003997 206.0
SYD3_k127_3026713_14 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000497 206.0
SYD3_k127_3026713_15 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000002807 198.0
SYD3_k127_3026713_16 Protein involved in cellulose biosynthesis - - - 0.000000000000000000000000000000000000000000000002861 192.0
SYD3_k127_3026713_17 OsmC-like protein K04063 - - 0.000000000000000000000000000000000000000000000008815 192.0
SYD3_k127_3026713_18 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000000000000000000000000002732 182.0
SYD3_k127_3026713_19 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000003606 182.0
SYD3_k127_3026713_2 PFAM asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 511.0
SYD3_k127_3026713_20 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000001137 186.0
SYD3_k127_3026713_21 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000003918 170.0
SYD3_k127_3026713_22 Histidine kinase-like ATPases K17752 - 2.7.11.1 0.00000000000000000000000000000000000001299 151.0
SYD3_k127_3026713_23 extracellular polysaccharide biosynthetic process K07011 - - 0.00000000000000000000000000000000000116 160.0
SYD3_k127_3026713_24 Acyltransferase family - - - 0.00000000000000000000000000000000003503 152.0
SYD3_k127_3026713_25 Histidine kinase - - - 0.0000000000000000000000000000000001092 151.0
SYD3_k127_3026713_26 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K17762 - - 0.00000000000000000000000000000001102 144.0
SYD3_k127_3026713_27 Two component transcriptional regulator, winged helix family K07658,K07668 - - 0.00000000000000000000000000000001127 143.0
SYD3_k127_3026713_28 Transcription termination factor nusG - - - 0.000000000000000000000000000004438 127.0
SYD3_k127_3026713_29 Metallo-peptidase family M12B Reprolysin-like - - - 0.00000000000000000000000001529 128.0
SYD3_k127_3026713_3 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K17763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001878 419.0
SYD3_k127_3026713_30 AAA domain K08252 - 2.7.10.1 0.000000000000000000000003624 116.0
SYD3_k127_3026713_31 Fibronectin type 3 domain - - - 0.0000000000000000000287 107.0
SYD3_k127_3026713_33 O-Antigen ligase - - - 0.0000000000001331 83.0
SYD3_k127_3026713_4 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006664 365.0
SYD3_k127_3026713_5 Heparinase II/III N-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003312 345.0
SYD3_k127_3026713_6 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 336.0
SYD3_k127_3026713_7 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004935 292.0
SYD3_k127_3026713_8 Glutathione S-transferase, C-terminal domain K11209 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001624 258.0
SYD3_k127_3043458_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 420.0
SYD3_k127_3088127_0 Prephenate dehydrogenase chorismate mutase K00210 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 317.0
SYD3_k127_3088127_1 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000009507 126.0
SYD3_k127_3088127_2 - - - - 0.00002792 49.0
SYD3_k127_309371_0 Pirin C-terminal cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000096 361.0
SYD3_k127_309371_1 - - - - 0.00000000000000000000000000000000000000000000000001768 183.0
SYD3_k127_309371_2 Sugar (and other) transporter K07552 - - 0.000000003915 64.0
SYD3_k127_309371_3 COGs COG4087 Soluble P-type ATPase - - - 0.0000156 51.0
SYD3_k127_3099683_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 2.583e-269 884.0
SYD3_k127_3099683_1 Belongs to the bacterial plant glucose-1-phosphate adenylyltransferase family K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006171 434.0
SYD3_k127_3099683_10 Peptidase family M54 K06974 - - 0.00000000002368 72.0
SYD3_k127_3099683_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 318.0
SYD3_k127_3099683_3 PFAM Na dependent nucleoside transporter K03317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 330.0
SYD3_k127_3099683_4 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008319 294.0
SYD3_k127_3099683_5 Oxidoreductase FAD-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000006291 243.0
SYD3_k127_3099683_6 Protein of unknown function (DUF520) K09767 - - 0.0000000000000000000000000000000000000000000000000001605 190.0
SYD3_k127_3099683_7 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000004086 136.0
SYD3_k127_3099683_8 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000004104 129.0
SYD3_k127_3099683_9 Thioesterase-like superfamily K07107 - - 0.000000000000000005591 95.0
SYD3_k127_3250299_0 3-demethylubiquinone-9 3-O-methyltransferase activity K07011,K20444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 400.0
SYD3_k127_3250299_2 radical SAM domain protein K22227 - - 0.00000000000000000000000000000000000000000009405 177.0
SYD3_k127_3250299_3 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000001658 172.0
SYD3_k127_3250299_4 Peptidase family C25 - - - 0.00000000000000000000000000002567 136.0
SYD3_k127_3250299_5 Tetratricopeptide repeat - - - 0.0000006049 64.0
SYD3_k127_3251216_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 4.972e-290 913.0
SYD3_k127_3251216_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 6.504e-205 658.0
SYD3_k127_3251216_10 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000002959 109.0
SYD3_k127_3251216_11 TIGRFAM Diguanylate cyclase K18967 - 2.7.7.65 0.00000000000000000001495 108.0
SYD3_k127_3251216_12 Thiamin pyrophosphokinase, vitamin B1 binding domain K00949 - 2.7.6.2 0.00000000000002373 82.0
SYD3_k127_3251216_13 Abhydrolase domain containing 18 - - - 0.00003735 57.0
SYD3_k127_3251216_2 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008899 574.0
SYD3_k127_3251216_3 ABC transporter K06022,K06158,K10834 - 3.6.3.29,3.6.3.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008184 551.0
SYD3_k127_3251216_4 proline dipeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 416.0
SYD3_k127_3251216_5 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004521 263.0
SYD3_k127_3251216_6 Phospholipase D. Active site motifs. K06131 - - 0.0000000000000000000000000000000000000000000000000000000000009634 225.0
SYD3_k127_3251216_7 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000001301 147.0
SYD3_k127_3251216_8 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 GO:0003674,GO:0003824,GO:0004551,GO:0004721,GO:0006139,GO:0006464,GO:0006470,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008138,GO:0008150,GO:0008152,GO:0008796,GO:0008803,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0015949,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0019538,GO:0034641,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0140096,GO:1901360,GO:1901564 3.6.1.41 0.0000000000000000000000000003722 116.0
SYD3_k127_3251216_9 Cold shock protein K03704 - - 0.000000000000000000000000208 108.0
SYD3_k127_3274491_0 Belongs to the thiolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 471.0
SYD3_k127_3274491_1 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001978 262.0
SYD3_k127_3274491_2 RNase_H superfamily K07502 - - 0.000000000000000000000000000000000000000000000001455 190.0
SYD3_k127_3274491_3 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.0000000000000000000000000000000006206 139.0
SYD3_k127_3274491_4 Protein of unknown function, DUF393 - - - 0.000000000000000000000000000000001181 134.0
SYD3_k127_3274491_5 NTPase K06928 - 3.6.1.15 0.00000000000000000000000000000002202 135.0
SYD3_k127_3274491_6 Domain of unknown function (DUF4440) - - - 0.00000000000000000000000000001738 129.0
SYD3_k127_3274491_7 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000009613 116.0
SYD3_k127_3274491_8 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000001147 107.0
SYD3_k127_3274491_9 His Kinase A (phosphoacceptor) domain - - - 0.0004998 52.0
SYD3_k127_3295954_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003531 474.0
SYD3_k127_3295954_1 pyrroloquinoline quinone binding K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 452.0
SYD3_k127_3295954_2 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008613 374.0
SYD3_k127_3295954_3 PFAM Enoyl-CoA hydratase isomerase K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000008242 246.0
SYD3_k127_3295954_4 negative regulation of transforming growth factor beta1 production K03068,K06261,K06593,K08867,K09187,K12488,K13738,K14972,K20050,K20371 GO:0000003,GO:0001654,GO:0001667,GO:0001745,GO:0002064,GO:0002065,GO:0002066,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005938,GO:0006928,GO:0006996,GO:0007010,GO:0007015,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007298,GO:0007423,GO:0008150,GO:0009653,GO:0009887,GO:0009888,GO:0009987,GO:0010564,GO:0010631,GO:0016020,GO:0016043,GO:0016477,GO:0017124,GO:0019904,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0030029,GO:0030036,GO:0030100,GO:0030154,GO:0030496,GO:0030707,GO:0030855,GO:0032153,GO:0032154,GO:0032155,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032794,GO:0032879,GO:0034329,GO:0034330,GO:0034332,GO:0034333,GO:0040011,GO:0043062,GO:0043063,GO:0044085,GO:0044421,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044459,GO:0044464,GO:0044703,GO:0045171,GO:0045177,GO:0045179,GO:0045216,GO:0045807,GO:0048259,GO:0048260,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048592,GO:0048609,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050794,GO:0050839,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051179,GO:0051302,GO:0051674,GO:0051704,GO:0051726,GO:0060429,GO:0060627,GO:0065007,GO:0071840,GO:0071944,GO:0090130,GO:0090132,GO:0090596,GO:0097435,GO:0098590,GO:0099568,GO:0099738 2.1.1.43,2.7.11.1 0.00000000000000000000000000165 131.0
SYD3_k127_3295954_5 Cytochrome c554 and c-prime - - - 0.00000000000000000000000006056 126.0
SYD3_k127_3295954_6 of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000002578 90.0
SYD3_k127_3295954_7 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.000000003221 68.0
SYD3_k127_3306328_0 PFAM peptidase M3A and M3B thimet oligopeptidase F K08602 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006571 595.0
SYD3_k127_3306328_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003811 544.0
SYD3_k127_3306328_10 - - - - 0.0000000001273 68.0
SYD3_k127_3306328_2 Permease family K06901 GO:0003674,GO:0005215,GO:0005345,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006863,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015205,GO:0015207,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015672,GO:0015851,GO:0015853,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072530,GO:0098655,GO:0098660,GO:0098662,GO:1902600,GO:1904823 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 441.0
SYD3_k127_3306328_3 oligopeptide transport K03305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 458.0
SYD3_k127_3306328_4 CheY-like receiver AAA-type ATPase and DNA-binding domains K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003472 422.0
SYD3_k127_3306328_5 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 391.0
SYD3_k127_3306328_6 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 343.0
SYD3_k127_3306328_7 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004487 282.0
SYD3_k127_3306328_8 - - - - 0.00000000000000000000000000000000000000005934 173.0
SYD3_k127_3385808_0 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01537 - 3.6.3.8 0.0 1245.0
SYD3_k127_3385808_1 L-asparaginase K01424 - 3.5.1.1 8.298e-201 635.0
SYD3_k127_3385808_10 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.000000000000000000000000000000000000000000000000000000000000000000000000009358 278.0
SYD3_k127_3385808_11 Protein of unknown function (DUF1579) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004311 249.0
SYD3_k127_3385808_12 Serine aminopeptidase, S33 K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000006034 252.0
SYD3_k127_3385808_13 Dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004806 237.0
SYD3_k127_3385808_14 Protein of unknown function (DUF541) K09797 - - 0.000000000000000000000000000000000000000000000000000000000000000007549 232.0
SYD3_k127_3385808_15 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000001532 219.0
SYD3_k127_3385808_16 MerR, DNA binding K13639 - - 0.0000000000000000000000000000000000000000000000000000000000002833 225.0
SYD3_k127_3385808_17 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000000000000004367 213.0
SYD3_k127_3385808_18 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000001794 212.0
SYD3_k127_3385808_19 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000002206 198.0
SYD3_k127_3385808_2 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000743 609.0
SYD3_k127_3385808_20 DoxX - - - 0.00000000000000000000000000000000000000000000000000007921 193.0
SYD3_k127_3385808_21 Polymorphic membrane protein Chlamydia - - - 0.000000000000000000000000000000000000000000000000002433 209.0
SYD3_k127_3385808_22 Uncharacterised protein family UPF0066 - - - 0.000000000000000000000000000000000000000000000000004387 184.0
SYD3_k127_3385808_23 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000004474 190.0
SYD3_k127_3385808_24 YCII-related domain - - - 0.0000000000000000000000000000000000000000000000004773 179.0
SYD3_k127_3385808_25 ECF sigma factor - - - 0.00000000000000000000000000000000000000000001141 171.0
SYD3_k127_3385808_26 Protein of unknown function (DUF2459) - - - 0.000000000000000000000000000000000000000004883 166.0
SYD3_k127_3385808_27 Doxx family K15977 - - 0.0000000000000000000000000000000000000005479 160.0
SYD3_k127_3385808_28 Low molecular weight phosphotyrosine protein phosphatase - - - 0.00000000000000000000000000000000000001852 151.0
SYD3_k127_3385808_29 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.000000000000000000000000000000002694 132.0
SYD3_k127_3385808_3 Sodium Bile acid symporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005179 495.0
SYD3_k127_3385808_30 LICD family - - - 0.0000000000000000000000000000002853 138.0
SYD3_k127_3385808_31 YCII-related domain - - - 0.0000000000000000000000000000141 128.0
SYD3_k127_3385808_32 Helix-turn-helix domain K07729 - - 0.000000000000000006258 85.0
SYD3_k127_3385808_33 Dodecin K09165 - - 0.0000000000000004201 94.0
SYD3_k127_3385808_34 redox-active disulfide protein 2 - - - 0.0000000000003561 82.0
SYD3_k127_3385808_35 Tellurite resistance protein TehB - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464 - 0.00000000001133 74.0
SYD3_k127_3385808_36 guanyl-nucleotide exchange factor activity - - - 0.00000000007523 75.0
SYD3_k127_3385808_37 YCII-related domain - - - 0.00000002261 67.0
SYD3_k127_3385808_38 OmpW family K07275 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0001145 55.0
SYD3_k127_3385808_39 WD domain, G-beta repeat - - - 0.0001239 54.0
SYD3_k127_3385808_4 Predicted permease K07089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007119 480.0
SYD3_k127_3385808_40 PFAM Protein kinase domain K12132 - 2.7.11.1 0.0001777 46.0
SYD3_k127_3385808_5 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008954 447.0
SYD3_k127_3385808_6 GatB/GatE catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 449.0
SYD3_k127_3385808_7 Queuosine biosynthesis protein K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 416.0
SYD3_k127_3385808_8 protein kinase activity K01972,K02342,K04096 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 2.7.7.7,6.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005607 364.0
SYD3_k127_3385808_9 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 305.0
SYD3_k127_350089_0 PEP-utilising enzyme, mobile domain K01006 - 2.7.9.1 0.0 1088.0
SYD3_k127_350089_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003591 609.0
SYD3_k127_350089_10 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000006763 128.0
SYD3_k127_350089_11 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000001066 105.0
SYD3_k127_350089_12 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.00000000000001867 89.0
SYD3_k127_350089_13 Thrombospondin type 3 repeat - - - 0.00004313 56.0
SYD3_k127_350089_2 PFAM glycyl-tRNA synthetase, alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008309 422.0
SYD3_k127_350089_3 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 411.0
SYD3_k127_350089_4 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005207 425.0
SYD3_k127_350089_5 Methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008071 398.0
SYD3_k127_350089_6 7TM-HD extracellular K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 382.0
SYD3_k127_350089_7 PFAM PhoH family protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 359.0
SYD3_k127_350089_8 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003589 276.0
SYD3_k127_350089_9 PFAM CBS domain containing protein K06189 - - 0.00000000000000000000000000000000000000000000000000000000003803 226.0
SYD3_k127_3510401_0 Surface antigen K07277,K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007045 317.0
SYD3_k127_351302_0 Heat shock 70 kDa protein K04043 - - 1.61e-282 881.0
SYD3_k127_351302_1 PFAM Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.961e-235 739.0
SYD3_k127_351302_10 integrase domain protein SAM domain protein K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009725 294.0
SYD3_k127_351302_11 PFAM ABC transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001275 307.0
SYD3_k127_351302_12 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000001468 272.0
SYD3_k127_351302_13 MazG nucleotide pyrophosphohydrolase domain K02499,K04765 - 3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000268 276.0
SYD3_k127_351302_14 ABC-type multidrug transport system ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004305 273.0
SYD3_k127_351302_15 electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001576 247.0
SYD3_k127_351302_16 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000002226 242.0
SYD3_k127_351302_17 transport system involved in gliding motility, auxiliary K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000004058 242.0
SYD3_k127_351302_18 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000001493 238.0
SYD3_k127_351302_19 Domain of unknown function (DUF4388) - - - 0.0000000000000000000000000000000000000000000000000000000000002543 237.0
SYD3_k127_351302_2 Glyceraldehyde-3-phosphate dehydrogenase K00150 - 1.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000822 462.0
SYD3_k127_351302_20 B12 binding domain K01849 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000002714 214.0
SYD3_k127_351302_21 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.00000000000000000000000000000000000000000000000000001269 207.0
SYD3_k127_351302_22 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000009344 184.0
SYD3_k127_351302_23 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000001099 169.0
SYD3_k127_351302_24 IstB-like ATP binding protein K02315 - - 0.000000000000000000000000000000000000000000008251 173.0
SYD3_k127_351302_25 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000007384 177.0
SYD3_k127_351302_26 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000004916 161.0
SYD3_k127_351302_27 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000008668 140.0
SYD3_k127_351302_28 COG2893 Phosphotransferase system, mannose fructose-specific component IIA K02793 - 2.7.1.191 0.000000000000000000000000000000006512 132.0
SYD3_k127_351302_29 PAS fold - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000001202 145.0
SYD3_k127_351302_3 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007176 424.0
SYD3_k127_351302_30 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.00000000000000000000000000000004854 135.0
SYD3_k127_351302_31 Mannose-6-phosphate isomerase - - - 0.00000000000000000000000000000005463 144.0
SYD3_k127_351302_33 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000406 109.0
SYD3_k127_351302_34 Regulatory protein - - - 0.000000000000000000004466 105.0
SYD3_k127_351302_35 phosphocarrier protein hpr K08485,K11189 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006808,GO:0006810,GO:0008150,GO:0008152,GO:0008643,GO:0009401,GO:0009987,GO:0010033,GO:0010243,GO:0016310,GO:0016740,GO:0016772,GO:0019538,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0065007,GO:0071702,GO:0071704,GO:1901564,GO:1901698 - 0.000000000000000001842 100.0
SYD3_k127_351302_36 Domain of unknown function (DUF1844) - - - 0.0000000000000000496 87.0
SYD3_k127_351302_38 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000495 66.0
SYD3_k127_351302_39 Domain of unknown function (DUF4340) - - - 0.000002154 60.0
SYD3_k127_351302_4 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 434.0
SYD3_k127_351302_40 Major facilitator Superfamily - - - 0.00007865 48.0
SYD3_k127_351302_5 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 416.0
SYD3_k127_351302_6 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005383 368.0
SYD3_k127_351302_7 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 366.0
SYD3_k127_351302_8 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 332.0
SYD3_k127_351302_9 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009533 304.0
SYD3_k127_353513_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008471 369.0
SYD3_k127_362320_0 TIGRFAM aminoacyl-histidine dipeptidase K01270 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 455.0
SYD3_k127_362320_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K02887,K03628 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 357.0
SYD3_k127_362320_2 MoaC family K03637 - 4.6.1.17 0.000000000000000000000000000000000002436 158.0
SYD3_k127_362320_3 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.0000000000000000000000000007286 123.0
SYD3_k127_362320_4 translation initiation factor activity K03699 - - 0.00000000000000000001795 100.0
SYD3_k127_362320_5 MobA-like NTP transferase domain K03752 - 2.7.7.77 0.0000000001636 69.0
SYD3_k127_3643308_0 DNA helicase K03657 - 3.6.4.12 0.000000001749 69.0
SYD3_k127_3657672_0 PFAM ketose-bisphosphate aldolase, class-II K01624,K08302 - 4.1.2.13,4.1.2.40 0.0000000000000000000000000000000000000000000000000000005661 205.0
SYD3_k127_3657672_1 FGGY family of carbohydrate kinases, N-terminal domain - - - 0.00000000000000000000000000000000000000002565 172.0
SYD3_k127_3657672_2 teichoic acid biosynthesis protein B K18704,K21592 - 2.7.8.14,2.7.8.46,2.7.8.47 0.000000000000000000000000007244 111.0
SYD3_k127_3749511_0 Phosphate transport system permease protein PstA K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000445 567.0
SYD3_k127_3749511_1 Binding-protein-dependent transport system inner membrane component K02037,K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004763 558.0
SYD3_k127_3749511_10 PFAM response regulator receiver K07657 - - 0.000000000000000000000000000000000000000000000000000000000000007812 244.0
SYD3_k127_3749511_11 Thrombospondin type 3 repeat - - - 0.0000000000000000000000000000000000000000000000000000000001471 234.0
SYD3_k127_3749511_12 deaminase K01493 - 3.5.4.12 0.00000000000000000000000000000000000000000000000000000000108 229.0
SYD3_k127_3749511_13 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000001087 143.0
SYD3_k127_3749511_14 PFAM Phosphate-selective porin O and P - - - 0.00000000000000000000000000000084 143.0
SYD3_k127_3749511_15 lipolytic protein G-D-S-L family K05970 - 3.1.1.53 0.000000000000000000000000000003134 141.0
SYD3_k127_3749511_16 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000004716 131.0
SYD3_k127_3749511_17 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000004229 130.0
SYD3_k127_3749511_18 lysyltransferase activity - - - 0.0000000000000000001178 102.0
SYD3_k127_3749511_19 hydrolase family 81 - - - 0.00000001611 66.0
SYD3_k127_3749511_2 COG0226 ABC-type phosphate transport system periplasmic K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006476 464.0
SYD3_k127_3749511_20 amine dehydrogenase activity - - - 0.00000003149 68.0
SYD3_k127_3749511_21 Belongs to the GSP D family K02453 - - 0.0001137 51.0
SYD3_k127_3749511_3 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 472.0
SYD3_k127_3749511_4 response regulator K02481,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 432.0
SYD3_k127_3749511_5 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 383.0
SYD3_k127_3749511_6 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000074 274.0
SYD3_k127_3749511_7 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009346 246.0
SYD3_k127_3749511_8 PFAM ATP-binding region, ATPase domain protein K02668,K07708,K07709 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000005752 240.0
SYD3_k127_3749511_9 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000002274 232.0
SYD3_k127_3789953_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005698 597.0
SYD3_k127_3789953_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 447.0
SYD3_k127_3789953_10 iron dependent repressor K03709 - - 0.00000000000000000000000000000000000000000000000000000000000004056 224.0
SYD3_k127_3789953_11 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000001434 211.0
SYD3_k127_3789953_12 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000006204 203.0
SYD3_k127_3789953_13 protein phosphatase 2C domain protein K01090,K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000002984 203.0
SYD3_k127_3789953_14 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000001911 193.0
SYD3_k127_3789953_15 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.00000000000000000000000000000000000006505 149.0
SYD3_k127_3789953_16 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000002212 156.0
SYD3_k127_3789953_17 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000003884 143.0
SYD3_k127_3789953_18 COG NOG14600 non supervised orthologous group - - - 0.000000000000000000000000000000000001995 138.0
SYD3_k127_3789953_19 - - - - 0.0000000000000000000000000000000009554 149.0
SYD3_k127_3789953_2 Natural resistance-associated macrophage protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007807 467.0
SYD3_k127_3789953_20 Ribosomal RNA adenine dimethylase - - - 0.000000000000000000000000000002541 133.0
SYD3_k127_3789953_21 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000001913 125.0
SYD3_k127_3789953_22 - - - - 0.000000000000000000002257 104.0
SYD3_k127_3789953_23 Domain of unknown function (DUF4115) K15539 - - 0.00000000000000008277 89.0
SYD3_k127_3789953_24 Subtilase family - - - 0.000000000001392 84.0
SYD3_k127_3789953_25 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000002634 79.0
SYD3_k127_3789953_26 Tetratricopeptide repeat - - - 0.000000000005846 79.0
SYD3_k127_3789953_27 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.00000000007459 71.0
SYD3_k127_3789953_28 Cna B domain protein - - - 0.0000002814 63.0
SYD3_k127_3789953_3 SpoIVB peptidase S55 K00973,K02414,K21449 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008805 324.0
SYD3_k127_3789953_30 Subtilase family - - - 0.000008531 61.0
SYD3_k127_3789953_31 DoxX-like family - - - 0.0003549 51.0
SYD3_k127_3789953_4 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264 312.0
SYD3_k127_3789953_5 Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004429 315.0
SYD3_k127_3789953_6 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 309.0
SYD3_k127_3789953_7 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002022 278.0
SYD3_k127_3789953_8 PFAM ExsB family protein K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002481 250.0
SYD3_k127_3789953_9 MgtE intracellular - - - 0.000000000000000000000000000000000000000000000000000000000000000000005022 253.0
SYD3_k127_3804789_0 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003277 397.0
SYD3_k127_3804789_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 320.0
SYD3_k127_3804789_2 Transcriptional regulator - - - 0.000000000000000000000759 104.0
SYD3_k127_3850874_0 cell adhesion K20276 - - 0.000000512 61.0
SYD3_k127_3931249_0 6-phosphofructokinase activity K00850,K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006904 412.0
SYD3_k127_3931249_1 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 399.0
SYD3_k127_3931249_2 adenosine deaminase K01488,K02029,K21053 - 3.5.4.2,3.5.4.4 0.0000000000000000000000000000000000000000000000000004069 209.0
SYD3_k127_3931249_3 Histidine Phosphotransfer domain - - - 0.0004045 50.0
SYD3_k127_3977414_0 prohibitin homologues K07192 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 524.0
SYD3_k127_3977414_1 Acyl-CoA dehydrogenase, C-terminal domain K00248,K09478 - 1.3.8.1,1.3.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004546 499.0
SYD3_k127_3977414_10 - - - - 0.000000000005413 72.0
SYD3_k127_3977414_11 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000008054 64.0
SYD3_k127_3977414_12 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0000007206 63.0
SYD3_k127_3977414_2 Mitochondrial biogenesis AIM24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009075 419.0
SYD3_k127_3977414_3 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 374.0
SYD3_k127_3977414_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008238 376.0
SYD3_k127_3977414_5 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 383.0
SYD3_k127_3977414_6 Ribosomal protein L11 methyltransferase (PrmA) K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000679 242.0
SYD3_k127_3977414_7 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000002072 134.0
SYD3_k127_3977414_8 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000002848 105.0
SYD3_k127_4017104_0 Cytochrome C and Quinol oxidase polypeptide I K15862 - 1.9.3.1 0.0 1101.0
SYD3_k127_4017104_1 Putative metal-binding domain of cation transport ATPase K01533 - 3.6.3.4 3.614e-216 698.0
SYD3_k127_4017104_10 Riboflavin synthase K00793 GO:0003674,GO:0003824,GO:0004746,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.9 0.00000000000000000000000000000000000000000000000001181 194.0
SYD3_k127_4017104_11 PFAM PHP domain protein K01104 - 3.1.3.48 0.000000000000000000000000000000000000000000000004232 192.0
SYD3_k127_4017104_12 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000000000001333 186.0
SYD3_k127_4017104_13 TIGRFAM cytochrome c oxidase, cbb3-type, subunit III K00406 - - 0.0000000000000000000000000000000000000000000218 170.0
SYD3_k127_4017104_14 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.0000000000000000000000000000000000000003484 165.0
SYD3_k127_4017104_15 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0008150,GO:0015934,GO:0016020,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.0000000000000000000000000000000000002341 157.0
SYD3_k127_4017104_16 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000067 152.0
SYD3_k127_4017104_17 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000005826 128.0
SYD3_k127_4017104_18 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000002649 119.0
SYD3_k127_4017104_19 Belongs to the UPF0109 family K06960 - - 0.0000000000000000000000003201 110.0
SYD3_k127_4017104_2 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 531.0
SYD3_k127_4017104_20 Tetratricopeptide TPR_2 repeat protein K12600 - - 0.000000000000000000000001776 119.0
SYD3_k127_4017104_21 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000108 98.0
SYD3_k127_4017104_22 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000001251 85.0
SYD3_k127_4017104_23 FixH - - - 0.0000000000000006469 92.0
SYD3_k127_4017104_24 Transcriptional regulator, Crp Fnr family K21556 - - 0.0000000005937 68.0
SYD3_k127_4017104_25 Cytochrome oxidase maturation protein cbb3-type - - - 0.000004718 60.0
SYD3_k127_4017104_26 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00001251 57.0
SYD3_k127_4017104_3 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008023 480.0
SYD3_k127_4017104_4 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007381 484.0
SYD3_k127_4017104_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 322.0
SYD3_k127_4017104_6 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005266 289.0
SYD3_k127_4017104_7 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000001183 285.0
SYD3_k127_4017104_8 Competence-damaged protein K03742 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000004152 269.0
SYD3_k127_4017104_9 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000001419 258.0
SYD3_k127_4017127_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1078.0
SYD3_k127_4017127_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000929 542.0
SYD3_k127_4017127_10 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000007466 123.0
SYD3_k127_4017127_11 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000008811 104.0
SYD3_k127_4017127_12 PFAM Bacterial regulatory proteins, gntR family K07979 - - 0.000000000000000005374 89.0
SYD3_k127_4017127_13 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17105 - 2.5.1.42 0.000000000000001126 88.0
SYD3_k127_4017127_14 Bacterial membrane protein, YfhO - - - 0.00000000000002349 87.0
SYD3_k127_4017127_15 PFAM sigma-70 region 2 domain protein, Sigma-70 region 4 type 2 K03088 - - 0.00000002013 63.0
SYD3_k127_4017127_16 indolepyruvate ferredoxin oxidoreductase activity K00179,K08941 - 1.2.7.8 0.000003644 54.0
SYD3_k127_4017127_2 SMART helicase c2 K03722 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009081 546.0
SYD3_k127_4017127_3 metallopeptidase activity K03568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 375.0
SYD3_k127_4017127_4 metallopeptidase activity K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000103 244.0
SYD3_k127_4017127_5 Serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000002093 242.0
SYD3_k127_4017127_6 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000001959 212.0
SYD3_k127_4017127_7 Belongs to the dGTPase family. Type 2 subfamily K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.0000000000000000000000000000000000000000000000000003463 202.0
SYD3_k127_4017127_8 PFAM Ribose galactose isomerase K01808 - 5.3.1.6 0.000000000000000000000000000000000000000001715 177.0
SYD3_k127_4017127_9 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000188 126.0
SYD3_k127_4032140_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 2.18e-305 969.0
SYD3_k127_4032140_1 Histidine ammonia-lyase K01745 - 4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002971 513.0
SYD3_k127_4032140_10 OsmC-like protein - - - 0.00000000000000000000000000000000001191 147.0
SYD3_k127_4032140_11 diguanylate cyclase - - - 0.0000000000000000000000000000000001713 149.0
SYD3_k127_4032140_12 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000003948 127.0
SYD3_k127_4032140_13 beta-N-acetylglucosaminidase K01197 - 3.2.1.35 0.00000000000000000006951 105.0
SYD3_k127_4032140_14 cheY-homologous receiver domain - - - 0.000000000000000002741 100.0
SYD3_k127_4032140_15 Aminotransferase class-V K04487 GO:0000096,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006464,GO:0006520,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016043,GO:0016226,GO:0016740,GO:0016782,GO:0016783,GO:0018130,GO:0018282,GO:0018283,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0022607,GO:0031071,GO:0031163,GO:0031974,GO:0031981,GO:0032324,GO:0034641,GO:0036211,GO:0042278,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043545,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0046983,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0065003,GO:0070013,GO:0071704,GO:0071840,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.8.1.7 0.00000000000000006015 96.0
SYD3_k127_4032140_16 Rossmann-like domain - - - 0.0000000000000001014 94.0
SYD3_k127_4032140_17 protein kinase activity K12132 - 2.7.11.1 0.0000001234 56.0
SYD3_k127_4032140_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 417.0
SYD3_k127_4032140_3 Inositol monophosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006541 302.0
SYD3_k127_4032140_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000218 284.0
SYD3_k127_4032140_5 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000001514 251.0
SYD3_k127_4032140_6 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000003358 226.0
SYD3_k127_4032140_7 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000005164 222.0
SYD3_k127_4032140_8 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000006201 184.0
SYD3_k127_4032140_9 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000009856 193.0
SYD3_k127_4032969_0 Phosphate transport system permease K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 481.0
SYD3_k127_4032969_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000001348 203.0
SYD3_k127_4079365_0 PFAM aminotransferase, class I K10907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008401 515.0
SYD3_k127_4079365_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 417.0
SYD3_k127_4079365_2 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009134 280.0
SYD3_k127_4079365_3 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000005349 252.0
SYD3_k127_4079365_4 Tetratricopeptide repeat - - - 0.0000000000000000003175 95.0
SYD3_k127_4079365_5 methyltransferase activity K13307,K13330 - 2.1.1.235,2.1.1.324 0.0000000000000005097 91.0
SYD3_k127_4079365_6 - - - - 0.000703 51.0
SYD3_k127_4127442_0 L-aspartate oxidase K00278 - 1.4.3.16 7.396e-205 668.0
SYD3_k127_4127442_1 ATPase activity K02045 - 3.6.3.25 3.462e-202 647.0
SYD3_k127_4127442_10 synthase homocitrate synthase family K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005878 444.0
SYD3_k127_4127442_11 Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import K02047 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 376.0
SYD3_k127_4127442_12 Zinc-binding dehydrogenase K07538 - 1.1.1.368 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007156 377.0
SYD3_k127_4127442_13 Mechanosensitive ion channel K16052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006286 376.0
SYD3_k127_4127442_14 Binding-protein-dependent transport system inner membrane component K02046 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007405 360.0
SYD3_k127_4127442_15 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 357.0
SYD3_k127_4127442_16 ParB-like nuclease domain K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 372.0
SYD3_k127_4127442_17 aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 346.0
SYD3_k127_4127442_18 Thrombospondin type 3 repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 331.0
SYD3_k127_4127442_19 TIGRFAM intracellular protease, PfpI family K05520 - 3.5.1.124 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 323.0
SYD3_k127_4127442_2 benzoyl-CoA reductase K04113 - 1.3.7.8 1.542e-196 644.0
SYD3_k127_4127442_20 Two component transcriptional regulator, winged helix family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004111 306.0
SYD3_k127_4127442_21 Benzoyl-CoA reductase subunit K04115 - 1.3.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001063 295.0
SYD3_k127_4127442_22 Pyruvate:ferredoxin oxidoreductase core domain II K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006868 287.0
SYD3_k127_4127442_23 alanine dehydrogenase activity K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002721 278.0
SYD3_k127_4127442_24 histidine kinase A domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001049 285.0
SYD3_k127_4127442_25 PFAM RES domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000011 250.0
SYD3_k127_4127442_26 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009104 250.0
SYD3_k127_4127442_27 Allophanate hydrolase subunit 2 K06350 - - 0.000000000000000000000000000000000000000000000000000000000000004156 240.0
SYD3_k127_4127442_28 Belongs to the UPF0271 (lamB) family K07160 - - 0.000000000000000000000000000000000000000000000000000006786 211.0
SYD3_k127_4127442_29 Allophanate hydrolase subunit 1 - - - 0.000000000000000000000000000000000000000000000000000008575 214.0
SYD3_k127_4127442_3 Acetyl-CoA hydrolase/transferase C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004132 552.0
SYD3_k127_4127442_30 epimerase K00486 - 1.14.13.9 0.000000000000000000000000000000000000000000000000006713 188.0
SYD3_k127_4127442_31 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000006041 192.0
SYD3_k127_4127442_32 Pyruvate ferredoxin/flavodoxin oxidoreductase K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000002761 195.0
SYD3_k127_4127442_33 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000033 172.0
SYD3_k127_4127442_34 Protein of unknown function (DUF3224) - - - 0.0000000000000000000000000000000000000000000008895 190.0
SYD3_k127_4127442_35 acetyltransferase - - - 0.000000000000000000000000000000000000000000001066 168.0
SYD3_k127_4127442_36 Protein of unknown function (DUF2384) - - - 0.0000000000000000000000000000000000007956 143.0
SYD3_k127_4127442_37 ASPIC and UnbV - - - 0.00000000000000000000000000000000000553 158.0
SYD3_k127_4127442_38 Carbon-nitrogen hydrolase K03820 - - 0.000000000000000000000000000000000008157 157.0
SYD3_k127_4127442_39 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000007355 139.0
SYD3_k127_4127442_4 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 501.0
SYD3_k127_4127442_40 - - - - 0.00000000000000000000000000001247 124.0
SYD3_k127_4127442_41 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000007129 126.0
SYD3_k127_4127442_42 Metallo-peptidase family M12B Reprolysin-like - - - 0.00000000000000000000000001811 126.0
SYD3_k127_4127442_43 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000006461 118.0
SYD3_k127_4127442_44 Cytidylate kinase-like family - - - 0.000000000000000000000006513 111.0
SYD3_k127_4127442_45 Predicted integral membrane protein (DUF2269) - - - 0.00000000000000000000004004 104.0
SYD3_k127_4127442_46 - - - - 0.0000000000000000001964 89.0
SYD3_k127_4127442_47 HNH endonuclease - - - 0.00000000000000000286 91.0
SYD3_k127_4127442_48 Cytochrome c K00406,K08906 - - 0.0000000000002885 77.0
SYD3_k127_4127442_49 Tetratricopeptide repeat - - - 0.0000000000003513 83.0
SYD3_k127_4127442_5 Enoyl-CoA hydratase/isomerase K07539 - 3.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 487.0
SYD3_k127_4127442_50 PFAM OmpW family protein K07275 - - 0.0000000003373 73.0
SYD3_k127_4127442_51 transcriptional regulator - - - 0.000000001333 69.0
SYD3_k127_4127442_52 Fibronectin type 3 domain - - - 0.000001185 57.0
SYD3_k127_4127442_53 Tetratricopeptide repeat-like domain K12855 GO:0000244,GO:0000375,GO:0000377,GO:0000387,GO:0000398,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016071,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0032991,GO:0034622,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0046540,GO:0065003,GO:0071001,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097525,GO:0097526,GO:0120114,GO:1901360,GO:1902494,GO:1990904 - 0.0001969 55.0
SYD3_k127_4127442_54 Pectate lyase - - - 0.0005322 49.0
SYD3_k127_4127442_6 His Kinase A (phosphoacceptor) domain K07641,K10819 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000896 498.0
SYD3_k127_4127442_7 Sulfate ABC transporter, periplasmic sulfate-binding protein K02048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 469.0
SYD3_k127_4127442_8 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 454.0
SYD3_k127_4127442_9 Benzoyl-CoA reductase subunit K04114 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005919 464.0
SYD3_k127_4131257_1 Putative metal-binding motif - - - 0.000000000000000000000006992 116.0
SYD3_k127_4131257_2 Pkd domain containing protein - - - 0.000000003843 69.0
SYD3_k127_4131257_3 PIN domain - - - 0.00001047 59.0
SYD3_k127_4131257_4 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.00004194 56.0
SYD3_k127_4133749_0 Sortilin, neurotensin receptor 3, - - - 0.0 1045.0
SYD3_k127_4133749_1 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 2.805e-311 965.0
SYD3_k127_4133749_10 Transcriptional regulatory protein, C terminal K07667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005695 322.0
SYD3_k127_4133749_11 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007629 297.0
SYD3_k127_4133749_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004302 284.0
SYD3_k127_4133749_13 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005343 300.0
SYD3_k127_4133749_14 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 0.000000000000000000000000000000000000000000000000000000000000000003062 232.0
SYD3_k127_4133749_15 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000001006 246.0
SYD3_k127_4133749_16 DNA alkylation repair enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000017 230.0
SYD3_k127_4133749_17 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K20444 - - 0.00000000000000000000000000000000000000000000000000000002502 213.0
SYD3_k127_4133749_18 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000003248 214.0
SYD3_k127_4133749_19 - - - - 0.00000000000000000000000000000000000000000005889 171.0
SYD3_k127_4133749_2 Domain of unknown function (DUF4118) K07646 - 2.7.13.3 4.907e-291 918.0
SYD3_k127_4133749_20 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000003122 156.0
SYD3_k127_4133749_21 YHS domain protein - - - 0.000000000000000000000000000002997 133.0
SYD3_k127_4133749_22 PFAM PIN domain - - - 0.00000000000000000000000000002962 124.0
SYD3_k127_4133749_24 YfaZ precursor - - - 0.0000000000000000000001619 107.0
SYD3_k127_4133749_25 Protein of unknown function (DUF1622) - - - 0.00000000000000000141 93.0
SYD3_k127_4133749_26 ribonuclease activity - - - 0.0000000000000005478 87.0
SYD3_k127_4133749_27 positive regulation of growth - - - 0.00000000000003361 81.0
SYD3_k127_4133749_28 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000001277 82.0
SYD3_k127_4133749_29 - - - - 0.0000000000008332 80.0
SYD3_k127_4133749_3 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030955,GO:0031420,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 4.145e-251 788.0
SYD3_k127_4133749_30 guanyl-nucleotide exchange factor activity - - - 0.00000000001125 79.0
SYD3_k127_4133749_31 protein trimerization K01206,K07114,K07126 - 3.2.1.51 0.00000000001334 74.0
SYD3_k127_4133749_32 Calpain family cysteine protease - - - 0.00007415 57.0
SYD3_k127_4133749_33 Ribbon-helix-helix protein, copG family - - - 0.0006441 47.0
SYD3_k127_4133749_4 Polysulphide reductase, NrfD K00185 - - 2.231e-213 669.0
SYD3_k127_4133749_5 4Fe-4S dicluster domain K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 533.0
SYD3_k127_4133749_6 Psort location Cytoplasmic, score 8.87 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 488.0
SYD3_k127_4133749_7 PFAM Na-Ca exchanger integrin-beta4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004039 489.0
SYD3_k127_4133749_8 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 424.0
SYD3_k127_4133749_9 major pilin protein fima - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004504 342.0
SYD3_k127_4158156_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1041.0
SYD3_k127_4158156_1 peptidase S9 prolyl oligopeptidase active site K01303 - 3.4.19.1 3.125e-225 747.0
SYD3_k127_4158156_10 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000175 146.0
SYD3_k127_4158156_11 ACT domain K09707 - - 0.0000000000000000000000000000123 133.0
SYD3_k127_4158156_12 Belongs to the beta-ketoacyl-ACP synthases family K05551,K09458,K14667 - 2.3.1.179,2.3.1.235,2.3.1.260 0.0000000000000000000000001366 124.0
SYD3_k127_4158156_13 MMPL family K07003 - - 0.000000000000000000485 104.0
SYD3_k127_4158156_14 Bacterial lipid A biosynthesis acyltransferase K02517,K22311 - 2.3.1.241,2.3.1.265 0.00000000000000003004 98.0
SYD3_k127_4158156_15 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000005387 91.0
SYD3_k127_4158156_16 transcriptional Regulator, LysR family - - - 0.000000000000003072 88.0
SYD3_k127_4158156_17 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000004641 81.0
SYD3_k127_4158156_18 filamentous hemagglutinin family N-terminal domain - - - 0.0000000001861 74.0
SYD3_k127_4158156_19 Protein tyrosine kinase - - - 0.00000000273 65.0
SYD3_k127_4158156_2 fructose-bisphosphate aldolase activity K01624,K08302 - 4.1.2.13,4.1.2.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 330.0
SYD3_k127_4158156_20 FabA-like domain - - - 0.000000006984 67.0
SYD3_k127_4158156_3 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008885 297.0
SYD3_k127_4158156_4 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000002551 266.0
SYD3_k127_4158156_5 Belongs to the beta-ketoacyl-ACP synthases family K05551,K09458 - 2.3.1.179,2.3.1.235,2.3.1.260 0.00000000000000000000000000000000000000000000000000000000000000000000187 251.0
SYD3_k127_4158156_6 polysaccharide deacetylase K01452 - 3.5.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000197 261.0
SYD3_k127_4158156_7 AMP-binding enzyme - - - 0.00000000000000000000000000000000000000000000000001529 201.0
SYD3_k127_4158156_8 Phospholipase D. Active site motifs. K06132 - - 0.000000000000000000000000000000000000000000000285 186.0
SYD3_k127_4158156_9 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) K00571 - 2.1.1.72 0.000000000000000000000000000000003042 147.0
SYD3_k127_4193648_0 aldehyde oxidase and xanthine dehydrogenase a b hammerhead K11177 - 1.17.1.4 3.754e-252 796.0
SYD3_k127_4193648_1 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 597.0
SYD3_k127_4193648_10 - - - - 0.00000000000000000000000000000000000002741 163.0
SYD3_k127_4193648_11 B3/4 domain - - - 0.000000000000000000000000000000000001339 154.0
SYD3_k127_4193648_12 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000005204 138.0
SYD3_k127_4193648_13 - - - - 0.00000000000000000001043 106.0
SYD3_k127_4193648_14 ABC-type transport system involved in multi-copper enzyme maturation permease component K01992 - - 0.0000002001 63.0
SYD3_k127_4193648_2 FecR protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005376 440.0
SYD3_k127_4193648_3 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001 410.0
SYD3_k127_4193648_4 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 405.0
SYD3_k127_4193648_5 PFAM molybdopterin dehydrogenase, FAD-binding K11178 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000001428 295.0
SYD3_k127_4193648_6 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000008316 206.0
SYD3_k127_4193648_7 2Fe-2S -binding K13483 - - 0.0000000000000000000000000000000000000000000000000002823 193.0
SYD3_k127_4193648_8 - - - - 0.00000000000000000000000000000000000000000000000002728 200.0
SYD3_k127_4193648_9 Protein of unknown function (DUF1326) - - - 0.0000000000000000000000000000000000000000000004803 177.0
SYD3_k127_4201867_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003968 445.0
SYD3_k127_4201867_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006756 443.0
SYD3_k127_4201867_10 - - - - 0.000000000000000000000000000000000000000000000000006516 188.0
SYD3_k127_4201867_11 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0040007,GO:0044237,GO:0050515 2.7.1.148 0.00000000000000000000000000000000000000000000006699 180.0
SYD3_k127_4201867_12 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000000000972 178.0
SYD3_k127_4201867_13 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000000000000000000000000000000004675 170.0
SYD3_k127_4201867_14 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000002375 144.0
SYD3_k127_4201867_15 Peptidase family M23 K21471 - - 0.0000000000000000000000000000000002762 154.0
SYD3_k127_4201867_16 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000007731 148.0
SYD3_k127_4201867_17 Tetratricopeptide repeat - - - 0.0000000000000000000000000000001761 143.0
SYD3_k127_4201867_18 Could be involved in septation K06412 - - 0.00000000000000000000000000001721 121.0
SYD3_k127_4201867_19 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000009275 103.0
SYD3_k127_4201867_2 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006281 417.0
SYD3_k127_4201867_20 Methyltransferase small domain - - - 0.00000000000000000000002081 99.0
SYD3_k127_4201867_21 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000003572 90.0
SYD3_k127_4201867_22 - - - - 0.00000008488 60.0
SYD3_k127_4201867_23 VanZ like family - - - 0.00008728 52.0
SYD3_k127_4201867_3 Dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 400.0
SYD3_k127_4201867_4 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 396.0
SYD3_k127_4201867_5 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 416.0
SYD3_k127_4201867_6 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 355.0
SYD3_k127_4201867_7 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008103 336.0
SYD3_k127_4201867_8 Large family of predicted nucleotide-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000008016 246.0
SYD3_k127_4201867_9 PFAM glycosyl transferase family 9 K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000001773 251.0
SYD3_k127_4220617_0 domain, Protein K15125,K21449 - - 0.0000000000000000000001411 109.0
SYD3_k127_4221326_0 Glycoside hydrolase, family 20 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 597.0
SYD3_k127_4221326_1 PFAM Rieske 2Fe-2S domain protein K00479,K00499 - 1.14.15.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 344.0
SYD3_k127_4221326_10 - - - - 0.000356 54.0
SYD3_k127_4221326_2 Belongs to the glycosyl hydrolase 26 family K01179 GO:0003674,GO:0003824,GO:0004553,GO:0008810,GO:0016787,GO:0016798 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003946 296.0
SYD3_k127_4221326_3 RNA polymerase recycling family C-terminal K03580 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001714 305.0
SYD3_k127_4221326_4 Peptidase M61 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005111 274.0
SYD3_k127_4221326_5 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000001274 249.0
SYD3_k127_4221326_6 Putative regulatory protein - - - 0.0000000000000000000000000000000000000000000000000003059 193.0
SYD3_k127_4221326_7 amino acid - - - 0.00000000000000000000000000000000000000000000001402 189.0
SYD3_k127_4221326_8 regulation of cell-substrate adhesion K06079 - - 0.0000000000001896 78.0
SYD3_k127_4221327_0 guanyl-nucleotide exchange factor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 662.0
SYD3_k127_4221327_1 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000509 316.0
SYD3_k127_4221327_2 Belongs to the peptidase S8 family K13276 - - 0.000000000000000000000000000000000000000001904 183.0
SYD3_k127_4221327_3 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.000000000000000000000000000000004793 151.0
SYD3_k127_4221327_4 Caspase domain - - - 0.0000004703 64.0
SYD3_k127_4269055_0 amino acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 500.0
SYD3_k127_4269055_1 ABC transporter transmembrane region K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003524 396.0
SYD3_k127_4269055_10 Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000004763 120.0
SYD3_k127_4269055_11 Protein of unknown function, DUF255 - - - 0.00000000000000005763 90.0
SYD3_k127_4269055_12 Carboxypeptidase regulatory-like domain - - - 0.000000000000001807 92.0
SYD3_k127_4269055_13 COG4771 Outer membrane receptor for ferrienterochelin and colicins K16089,K19611 - - 0.0000000001059 74.0
SYD3_k127_4269055_2 epimerase dehydratase K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005145 318.0
SYD3_k127_4269055_3 CHAT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002997 283.0
SYD3_k127_4269055_4 3-oxo-5-alpha-steroid 4-dehydrogenase K12343 - 1.3.1.22 0.0000000000000000000000000000000000000000000000000000000000000000001678 255.0
SYD3_k127_4269055_5 Mo-molybdopterin cofactor biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000823 206.0
SYD3_k127_4269055_6 Belongs to the peptidase S8 family K08651,K14743 - 3.4.21.66 0.00000000000000000000000000000000000000000000001162 190.0
SYD3_k127_4269055_7 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.00000000000000000000000000000000000000000000002328 196.0
SYD3_k127_4269055_8 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000002458 139.0
SYD3_k127_4269055_9 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000007809 133.0
SYD3_k127_4272511_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1215.0
SYD3_k127_4272511_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007317 570.0
SYD3_k127_4272511_2 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000056 261.0
SYD3_k127_4272511_3 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.000000000000000000000000000003557 126.0
SYD3_k127_4272511_4 Transcriptional regulator - - - 0.000000000000002318 80.0
SYD3_k127_4272511_5 - - - - 0.0000005349 58.0
SYD3_k127_4286483_0 phosphorelay signal transduction system K02481,K07713,K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008564 451.0
SYD3_k127_4286483_1 phosphorelay sensor kinase activity - - - 0.00000000000000000000000000000000000006597 160.0
SYD3_k127_4286483_2 Alpha-tubulin suppressor and related RCC1 domain-containing - - - 0.0000000000000000000000000000000002792 152.0
SYD3_k127_4286483_3 Amidohydrolase family - - - 0.0000000000000000000004985 107.0
SYD3_k127_4341552_0 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 508.0
SYD3_k127_4341552_1 Methyltransferase type 11 K00570 - 2.1.1.17,2.1.1.71 0.0000000000000000000000000000000000000000000002393 175.0
SYD3_k127_4347447_0 Peptidase dimerisation domain K01436,K01438,K01439 - 3.5.1.16,3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 509.0
SYD3_k127_4347447_1 Proprotein convertase P-domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 531.0
SYD3_k127_4347447_2 OPT oligopeptide transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 316.0
SYD3_k127_4347447_3 ABC transporter K02017 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000007416 246.0
SYD3_k127_4347447_4 molybdate ABC transporter, permease protein K02017,K02018 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000001874 219.0
SYD3_k127_4347447_5 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000001396 222.0
SYD3_k127_4347447_6 ABC-type molybdate transport system periplasmic component K02020 GO:0003674,GO:0005488,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0015689,GO:0015698,GO:0030973,GO:0043167,GO:0043168,GO:0051179,GO:0051234,GO:1901359 - 0.0000000000000000000000000000000000000001672 173.0
SYD3_k127_4347447_7 BlaR1 peptidase M56 - - - 0.0000000006569 71.0
SYD3_k127_4347447_8 TIGRFAM TonB family protein K03832 - - 0.00000007949 64.0
SYD3_k127_4347447_9 Gram-negative bacterial TonB protein C-terminal - - - 0.000002686 59.0
SYD3_k127_4353938_0 Phage late control gene D protein (GPD) K11904 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009141 425.0
SYD3_k127_4353938_1 Type VI secretion system, VipA, VC_A0107 or Hcp2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007983 273.0
SYD3_k127_4356963_0 Tetratricopeptide repeat K12132 - 2.7.11.1 0.00000000000000000000000000000000000003155 151.0
SYD3_k127_4356963_1 SMART Integrin alpha beta-propellor repeat protein - - - 0.0000000000000000000000000000000001041 153.0
SYD3_k127_4356963_2 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000002643 129.0
SYD3_k127_4356963_3 Putative metal-binding motif - - - 0.00002212 57.0
SYD3_k127_436512_0 Glycosyl hydrolase family 65, C-terminal domain - - - 0.0 1406.0
SYD3_k127_436512_1 Glycosyl hydrolases family 15 - - - 7.806e-268 837.0
SYD3_k127_436512_10 DGC domain - - - 0.00000000000000000000000000000000000000006301 163.0
SYD3_k127_436512_11 Helicase - - - 0.000000000000000000000000000000000001433 141.0
SYD3_k127_436512_12 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000008344 144.0
SYD3_k127_436512_13 OmpA family K03286 - - 0.000000000000000000000000000000002228 142.0
SYD3_k127_436512_14 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000002368 123.0
SYD3_k127_436512_15 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.0000000000000000000000000000394 123.0
SYD3_k127_436512_16 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000008782 111.0
SYD3_k127_436512_18 Belongs to the ompA family - - - 0.000000000000000008893 96.0
SYD3_k127_436512_19 Bacterial Ig-like domain (group 3) - - - 0.000000000000000008965 100.0
SYD3_k127_436512_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009948 497.0
SYD3_k127_436512_20 Nucleic acid binding OB-fold tRNA helicase-type - - - 0.00000000000003602 79.0
SYD3_k127_436512_21 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000000000006436 85.0
SYD3_k127_436512_22 1,3--beta-D-glucan 3-glucanohydrolase K01186 - 3.2.1.18 0.00000000000104 79.0
SYD3_k127_436512_24 CAAX protease self-immunity K07052 - - 0.000001492 58.0
SYD3_k127_436512_25 FtsX-like permease family - - - 0.00005295 57.0
SYD3_k127_436512_3 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 413.0
SYD3_k127_436512_4 oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 376.0
SYD3_k127_436512_5 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 362.0
SYD3_k127_436512_6 UPF0126 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001269 287.0
SYD3_k127_436512_7 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000004965 265.0
SYD3_k127_436512_8 Histidine phosphatase superfamily (branch 1) - - - 0.00000000000000000000000000000000000000000000000000000000000004255 235.0
SYD3_k127_436512_9 Doxx family K15977 - - 0.0000000000000000000000000000000000000000000000000008666 186.0
SYD3_k127_4420839_0 IS66 C-terminal element - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 374.0
SYD3_k127_4420839_1 IS66 Orf2 like protein - - - 0.000000000000000000000000001725 119.0
SYD3_k127_4420839_2 DDE domain K07497 - - 0.0005328 49.0
SYD3_k127_4420839_3 RHS Repeat - - - 0.0007961 44.0
SYD3_k127_4496273_0 Berberine and berberine like - - - 3.78e-209 683.0
SYD3_k127_4496273_1 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007967 448.0
SYD3_k127_4496273_2 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 413.0
SYD3_k127_4496273_3 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000193 176.0
SYD3_k127_4517877_0 Superfamily II DNA RNA helicases, SNF2 family - - - 0.0 1062.0
SYD3_k127_4517877_1 Amino acid permease - GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - 2.015e-263 830.0
SYD3_k127_4517877_2 H( )-stimulated, divalent metal cation uptake system K03322 - - 6.05e-209 668.0
SYD3_k127_4517877_3 Cytochrome bd-type quinol oxidase subunit 1 K00425 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 572.0
SYD3_k127_4517877_4 COG1294 Cytochrome bd-type quinol oxidase subunit 2 K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007253 418.0
SYD3_k127_4517877_5 TrkA-C domain K03499 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 288.0
SYD3_k127_4517877_6 Ion channel K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005135 275.0
SYD3_k127_4517877_7 TrkA-N domain K03499,K10716 - - 0.00000000000000000000000000000000000000000006024 187.0
SYD3_k127_4517877_8 - - - - 0.000000000000000000000006824 109.0
SYD3_k127_4517877_9 6-O-methylguanine DNA methyltransferase, DNA binding domain K07443 - - 0.0000000000000000000004158 100.0
SYD3_k127_4531778_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 3.755e-276 890.0
SYD3_k127_4531778_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005889 587.0
SYD3_k127_4531778_10 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000001593 154.0
SYD3_k127_4531778_11 Binds the 23S rRNA K02909 - - 0.000000000000000000000000007012 113.0
SYD3_k127_4531778_12 Pfam Secreted repeat of - - - 0.0000000000001315 83.0
SYD3_k127_4531778_13 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.0000001961 63.0
SYD3_k127_4531778_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 552.0
SYD3_k127_4531778_3 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 449.0
SYD3_k127_4531778_4 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003157 311.0
SYD3_k127_4531778_5 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0043021,GO:0043022,GO:0043023,GO:0043086,GO:0044092,GO:0044424,GO:0044464,GO:0044877,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0098772 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 312.0
SYD3_k127_4531778_6 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000003341 228.0
SYD3_k127_4531778_8 - - - - 0.0000000000000000000000000000000000000000000000000008764 203.0
SYD3_k127_4531778_9 Ferrous iron transport protein B K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000009488 178.0
SYD3_k127_4546374_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000002759 274.0
SYD3_k127_4565797_0 Best Blastp hit gi 4323609 gb AAD16446.1 (AF101410) transposase Mycoplasma mycoides subsp. mycoides SC gi 4323611 gb AAD16447.1 (AF101411) transposase Mycoplasma mycoides subsp. mycoides SC gi 4323613 gb AAD16448.1 (AF101412) transposase Mycoplasma mycoides subsp. mycoides SC , score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 392.0
SYD3_k127_4565797_1 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000663 337.0
SYD3_k127_4565797_2 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.00001053 59.0
SYD3_k127_4571265_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1835.0
SYD3_k127_4571265_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 6.729e-272 852.0
SYD3_k127_4571265_10 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 282.0
SYD3_k127_4571265_11 Chromate transporter K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001345 294.0
SYD3_k127_4571265_12 Cupin 2, conserved barrel domain protein K11477 - - 0.00000000000000000000000000000000000000000000000000000000000000000005031 242.0
SYD3_k127_4571265_13 Penicillinase repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000602 214.0
SYD3_k127_4571265_14 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000000000000000006791 222.0
SYD3_k127_4571265_15 gluconolactonase activity K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000003991 201.0
SYD3_k127_4571265_16 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000298 175.0
SYD3_k127_4571265_17 C-type lectin (CTL) or carbohydrate-recognition domain (CRD) - - - 0.0000000000000002207 93.0
SYD3_k127_4571265_18 COG0508 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - - - 0.0000000000311 68.0
SYD3_k127_4571265_19 EF hand - - - 0.0001126 49.0
SYD3_k127_4571265_2 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 6.246e-260 818.0
SYD3_k127_4571265_20 guanyl-nucleotide exchange factor activity - - - 0.0001238 55.0
SYD3_k127_4571265_21 PFAM SMP-30 Gluconolaconase LRE-like region K01053 - 3.1.1.17 0.0008193 51.0
SYD3_k127_4571265_3 AMP-binding enzyme C-terminal domain K00666 - - 5.758e-244 780.0
SYD3_k127_4571265_4 Outer membrane efflux protein K15725 - - 1.608e-197 622.0
SYD3_k127_4571265_5 Peptidase M56, BlaR1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 452.0
SYD3_k127_4571265_6 Alginate lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 406.0
SYD3_k127_4571265_7 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 368.0
SYD3_k127_4571265_8 PFAM Enoyl-CoA hydratase isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005885 324.0
SYD3_k127_4571265_9 gluconolactonase K01053 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002569 334.0
SYD3_k127_4635676_0 Belongs to the ClpA ClpB family K03696 - - 6.348e-299 937.0
SYD3_k127_4635676_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 4.668e-245 780.0
SYD3_k127_4635676_10 TIGRFAM outer membrane protein assembly complex, YaeT protein K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001138 284.0
SYD3_k127_4635676_11 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001353 265.0
SYD3_k127_4635676_12 ABC-type transport system involved in lipoprotein release permease component K02004,K09808 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008104,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0034613,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0070727,GO:0071944,GO:0072657,GO:0089705,GO:0098796,GO:0098797,GO:1990778 - 0.000000000000000000000000000000000000000000000000000000000000000000000149 256.0
SYD3_k127_4635676_13 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535,K13599 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000001133 263.0
SYD3_k127_4635676_14 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000009716 258.0
SYD3_k127_4635676_15 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000002018 211.0
SYD3_k127_4635676_16 PFAM ABC transporter K02003 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000004334 209.0
SYD3_k127_4635676_17 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000109 213.0
SYD3_k127_4635676_18 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 0.00000000000000000000000000000000000000000000000002191 186.0
SYD3_k127_4635676_19 ggdef domain - - - 0.0000000000000000000000000000000000000000000000005203 200.0
SYD3_k127_4635676_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 2.896e-220 712.0
SYD3_k127_4635676_20 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000005198 187.0
SYD3_k127_4635676_21 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000001536 178.0
SYD3_k127_4635676_22 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000001687 190.0
SYD3_k127_4635676_23 ggdef domain - - - 0.000000000000000000000000000000000000000493 165.0
SYD3_k127_4635676_24 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000006398 167.0
SYD3_k127_4635676_25 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.0000000000000000000000000000000001368 135.0
SYD3_k127_4635676_26 positive regulation of growth rate - - - 0.0000000000000000000000000000000002114 146.0
SYD3_k127_4635676_27 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.000000000000000000000000000000002406 146.0
SYD3_k127_4635676_28 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 - 2.1.1.171 0.000000000000000000000000000000008072 136.0
SYD3_k127_4635676_29 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000001495 136.0
SYD3_k127_4635676_3 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004454 482.0
SYD3_k127_4635676_30 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.0000000000000000000000000000000283 131.0
SYD3_k127_4635676_31 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.000000000000000000000000002618 124.0
SYD3_k127_4635676_32 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000002493 109.0
SYD3_k127_4635676_33 Required for maturation of 30S ribosomal subunits K09748 - - 0.000000000000000000003065 111.0
SYD3_k127_4635676_34 COG1214 Inactive homolog of metal-dependent proteases K14742 - - 0.000000000000005356 89.0
SYD3_k127_4635676_35 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.000000000001316 79.0
SYD3_k127_4635676_36 protein conserved in bacteria K09764 - - 0.000000000008144 71.0
SYD3_k127_4635676_37 oligosaccharyl transferase activity - - - 0.0000000001023 75.0
SYD3_k127_4635676_38 oxidoreductase activity - - - 0.0000000001707 74.0
SYD3_k127_4635676_39 Protein of unknown function (DUF465) - - - 0.0000000002365 64.0
SYD3_k127_4635676_4 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 416.0
SYD3_k127_4635676_40 unfolded protein binding K06142 - - 0.0000000007788 72.0
SYD3_k127_4635676_41 Tetratricopeptide repeat - - - 0.00000003426 66.0
SYD3_k127_4635676_42 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03646,K03832 - - 0.0000003997 62.0
SYD3_k127_4635676_43 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000001818 60.0
SYD3_k127_4635676_44 nuclear chromosome segregation - - - 0.000267 54.0
SYD3_k127_4635676_45 integral membrane protein - GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0004311 51.0
SYD3_k127_4635676_5 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 407.0
SYD3_k127_4635676_6 DEAD DEAH box helicase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003432 336.0
SYD3_k127_4635676_7 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 287.0
SYD3_k127_4635676_8 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001434 299.0
SYD3_k127_4635676_9 Bacterial regulatory protein, Fis family K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007024 282.0
SYD3_k127_4698837_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1442.0
SYD3_k127_4698837_1 nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 549.0
SYD3_k127_4698837_10 PFAM peptidase S1 and S6 chymotrypsin Hap K04771 - 3.4.21.107 0.000000384 58.0
SYD3_k127_4698837_2 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032991,GO:0032993,GO:0033554,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000008084 252.0
SYD3_k127_4698837_3 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000003842 232.0
SYD3_k127_4698837_4 PASTA K08884,K12132 GO:0000270,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0008360,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009605,GO:0009607,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0010698,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0022603,GO:0022604,GO:0030145,GO:0030203,GO:0030234,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032091,GO:0034645,GO:0036211,GO:0040007,GO:0042304,GO:0042546,GO:0042802,GO:0043085,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043388,GO:0043393,GO:0043412,GO:0044036,GO:0044038,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046872,GO:0046890,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051055,GO:0051098,GO:0051099,GO:0051100,GO:0051101,GO:0051128,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0062012,GO:0062014,GO:0065007,GO:0065008,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0075136,GO:0080090,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.11.1 0.000000000000000000000000000000000000000000000000000004885 219.0
SYD3_k127_4698837_5 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000003502 207.0
SYD3_k127_4698837_7 - - - - 0.00000000000000000000000000000000000004711 160.0
SYD3_k127_4698837_8 Belongs to the ompA family K03640 GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032153,GO:0044425,GO:0044462,GO:0044464,GO:0051301,GO:0071944,GO:0098552 - 0.000000000000000009161 96.0
SYD3_k127_4698837_9 - - - - 0.0000000000001222 79.0
SYD3_k127_4752357_0 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4-amino-5-aminomethyl-2-methylpyrimidine to 4-amino- 5-hydroxymethyl-2-methylpyrimidine (HMP) K20896 - - 0.000000000000000000000000000000000000151 149.0
SYD3_k127_4752357_1 positive regulation of proteasomal protein catabolic process - GO:0001763,GO:0002009,GO:0003401,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006950,GO:0007275,GO:0008150,GO:0009653,GO:0009791,GO:0009887,GO:0009888,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010468,GO:0010604,GO:0012505,GO:0019222,GO:0030154,GO:0030162,GO:0030323,GO:0030324,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0033554,GO:0034976,GO:0035239,GO:0035295,GO:0040007,GO:0042176,GO:0042692,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045732,GO:0045862,GO:0048286,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048589,GO:0048729,GO:0048731,GO:0048747,GO:0048754,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051146,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051716,GO:0055001,GO:0055002,GO:0060255,GO:0060425,GO:0060429,GO:0060441,GO:0060447,GO:0060541,GO:0060560,GO:0060562,GO:0060602,GO:0061061,GO:0061136,GO:0061138,GO:0065007,GO:0080090,GO:1901800,GO:1903050,GO:1903052,GO:1903362,GO:1903364 - 0.000000000000000000000000001878 128.0
SYD3_k127_4782376_0 Sulfatase K01130 - 3.1.6.1 1.147e-234 734.0
SYD3_k127_4782376_1 Rnk N-terminus K06140 - - 0.000000000000000001775 93.0
SYD3_k127_4782376_2 FMN reductase (NADPH) activity K03809 - 1.6.5.2 0.000000000000000002354 96.0
SYD3_k127_4784282_0 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 344.0
SYD3_k127_4784282_1 PFAM Aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008666 321.0
SYD3_k127_4784282_10 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000007103 121.0
SYD3_k127_4784282_11 light absorption - - - 0.00004073 54.0
SYD3_k127_4784282_2 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004683 280.0
SYD3_k127_4784282_3 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000004937 281.0
SYD3_k127_4784282_4 tRNA pseudouridine synthase K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000005859 232.0
SYD3_k127_4784282_5 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000001436 246.0
SYD3_k127_4784282_6 - - - - 0.000000000000000000000000000000000000000000001498 170.0
SYD3_k127_4784282_7 - - - - 0.00000000000000000000000000000265 130.0
SYD3_k127_4784282_8 Protein conserved in bacteria - - - 0.00000000000000000000000000008332 121.0
SYD3_k127_4784282_9 Protein of unknown function (DUF1318) K09978 - - 0.0000000000000000000000001164 115.0
SYD3_k127_4890032_0 6-phosphogluconolactonase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 321.0
SYD3_k127_4890032_1 TOBE domain K02017,K02018 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000002684 286.0
SYD3_k127_4890032_2 Molybdate ABC transporter K02017,K02018 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000000000416 250.0
SYD3_k127_4890032_3 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000002917 198.0
SYD3_k127_4890032_4 Bacterial extracellular solute-binding protein K02020 - - 0.00000000000000000000000000000000000000000000005261 180.0
SYD3_k127_4890032_5 COGs COG1476 transcriptional regulator protein K07729 - - 0.0000000000000000001455 104.0
SYD3_k127_4890032_6 - - - - 0.000002971 55.0
SYD3_k127_4926593_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 3.626e-321 1004.0
SYD3_k127_4926593_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008150,GO:0008152,GO:0009295,GO:0009330,GO:0009987,GO:0016043,GO:0032991,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.99.1.3 1.116e-267 850.0
SYD3_k127_4926593_10 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 GO:0003674,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090304,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 405.0
SYD3_k127_4926593_11 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006558 324.0
SYD3_k127_4926593_12 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016832,GO:0019637,GO:0044237,GO:0071704,GO:1901135 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006515 314.0
SYD3_k127_4926593_13 PFAM CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000647 304.0
SYD3_k127_4926593_14 Tryptophan halogenase K21401 - 1.3.99.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009217 289.0
SYD3_k127_4926593_15 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000001956 264.0
SYD3_k127_4926593_16 (AIR) carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001384 259.0
SYD3_k127_4926593_17 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000001295 261.0
SYD3_k127_4926593_18 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000002129 240.0
SYD3_k127_4926593_19 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000000000000000000000000000000007434 228.0
SYD3_k127_4926593_2 Carboxyl transferase domain K01966,K17489 - 2.1.3.1,2.1.3.15,6.4.1.3 4.598e-241 768.0
SYD3_k127_4926593_20 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000001486 208.0
SYD3_k127_4926593_21 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000002958 172.0
SYD3_k127_4926593_22 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000003278 164.0
SYD3_k127_4926593_23 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000005811 124.0
SYD3_k127_4926593_24 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000006225 118.0
SYD3_k127_4926593_25 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000000001385 120.0
SYD3_k127_4926593_26 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.0000000000000000000000149 104.0
SYD3_k127_4926593_27 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000003988 92.0
SYD3_k127_4926593_28 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000004755 103.0
SYD3_k127_4926593_29 Jag N-terminus K06346 - - 0.0000000000000000025 94.0
SYD3_k127_4926593_3 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 4.574e-240 794.0
SYD3_k127_4926593_30 Biotin-requiring enzyme - - - 0.00000000000000000653 98.0
SYD3_k127_4926593_31 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0031123,GO:0031404,GO:0032991,GO:0033204,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042301,GO:0042779,GO:0042780,GO:0042781,GO:0043167,GO:0043168,GO:0043170,GO:0043199,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901681,GO:1902494,GO:1902555,GO:1905267,GO:1905348,GO:1990904 3.1.26.5 0.000000000000008271 80.0
SYD3_k127_4926593_32 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000001752 68.0
SYD3_k127_4926593_33 Polymer-forming cytoskeletal - - - 0.00000000002355 71.0
SYD3_k127_4926593_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 7.657e-238 745.0
SYD3_k127_4926593_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.525e-237 742.0
SYD3_k127_4926593_6 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002925 621.0
SYD3_k127_4926593_7 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005285 546.0
SYD3_k127_4926593_8 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010556,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:1990837,GO:2000112 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003645 482.0
SYD3_k127_4926593_9 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007429 426.0
SYD3_k127_4993787_0 PFAM Glycosyl transferases group 1 K13057 - 2.4.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 472.0
SYD3_k127_4993787_1 alpha,alpha-trehalose-phosphate synthase K00697 - 2.4.1.15,2.4.1.347 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000488 387.0
SYD3_k127_4993787_2 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000008579 167.0
SYD3_k127_4993787_3 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697,K16055 GO:0003674,GO:0003824,GO:0003825,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016311,GO:0016740,GO:0016757,GO:0016758,GO:0016787,GO:0016788,GO:0016791,GO:0030145,GO:0030312,GO:0033554,GO:0034637,GO:0035251,GO:0040007,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046527,GO:0046872,GO:0046914,GO:0047260,GO:0050896,GO:0051716,GO:0070413,GO:0071704,GO:0071944,GO:1901576 2.4.1.15,2.4.1.347,3.1.3.12 0.00000000000000000000003689 116.0
SYD3_k127_5044165_0 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1017.0
SYD3_k127_5044165_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 6.622e-205 645.0
SYD3_k127_5044165_10 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000005189 223.0
SYD3_k127_5044165_11 Fumarylacetoacetate (FAA) hydrolase family K16165 - 3.7.1.20 0.000000000000000000000000000000000000000000000000000000003689 213.0
SYD3_k127_5044165_12 succinate dehydrogenase K00241 - - 0.00000000000000000000000000000000000000000000000000000001722 209.0
SYD3_k127_5044165_13 pyridoxal 5'-phosphate salvage K00020,K00275 - 1.1.1.31,1.4.3.5 0.0000000000000000000000000000000000000000000000000002701 191.0
SYD3_k127_5044165_14 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000000000001668 192.0
SYD3_k127_5044165_15 uridine kinase K00876 - 2.7.1.48 0.00000000000000000000000000000000000000000002413 171.0
SYD3_k127_5044165_16 inositol 2-dehydrogenase activity - - - 0.0000000000000000000000000000000000000000001873 180.0
SYD3_k127_5044165_17 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000003033 180.0
SYD3_k127_5044165_18 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000008143 156.0
SYD3_k127_5044165_19 ORF6N domain - - - 0.0000000000000000000000000000000000001204 146.0
SYD3_k127_5044165_2 Dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 557.0
SYD3_k127_5044165_20 PFAM Rhomboid family K19225 - 3.4.21.105 0.00000000000000000000000003923 121.0
SYD3_k127_5044165_21 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.000000000000000000000709 110.0
SYD3_k127_5044165_22 Peptidase M16 - - - 0.00000000000000005043 95.0
SYD3_k127_5044165_23 - - - - 0.0000000444 64.0
SYD3_k127_5044165_24 C-terminal domain of CHU protein family - - - 0.0000755 52.0
SYD3_k127_5044165_25 Bacterial PH domain - - - 0.0008015 48.0
SYD3_k127_5044165_3 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 542.0
SYD3_k127_5044165_4 Domain of unknown function (DUF1731) K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002459 460.0
SYD3_k127_5044165_5 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003471 447.0
SYD3_k127_5044165_6 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 425.0
SYD3_k127_5044165_7 4Fe-4S ferredoxin iron-sulfur binding domain protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 374.0
SYD3_k127_5044165_8 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003753 299.0
SYD3_k127_5044165_9 amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008079 275.0
SYD3_k127_5081384_0 Recombination endonuclease VII - - - 0.00000000000334 75.0
SYD3_k127_5081384_1 Carboxypeptidase regulatory-like domain - - - 0.00000000007012 76.0
SYD3_k127_5081384_2 Putative phage tail protein - - - 0.000006921 59.0
SYD3_k127_5081384_3 Protein of unknown function (DUF2793) - - - 0.00001745 55.0
SYD3_k127_5102039_0 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 357.0
SYD3_k127_5102039_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004725 240.0
SYD3_k127_5102039_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000006824 237.0
SYD3_k127_5102039_3 acr, cog1565 - - - 0.00000000000000000000000000000000000000000000000000003225 210.0
SYD3_k127_5102039_4 Menaquinol oxidoreductase complex Cbc4, cytochrome c subunit - - - 0.000000000000000000000000000000000008335 141.0
SYD3_k127_5102039_5 transposition, DNA-mediated K02342 - 2.7.7.7 0.00000000004502 73.0
SYD3_k127_5102039_6 O-linked N-acetylglucosamine transferase SPINDLY family - - - 0.00000000132 71.0
SYD3_k127_5102039_7 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.8.1.4 0.0000006188 53.0
SYD3_k127_5102039_8 transposition, DNA-mediated K02342 - 2.7.7.7 0.0003012 51.0
SYD3_k127_5129342_0 DinB family - - - 0.0000000000000000000000000000000000000000000004406 181.0
SYD3_k127_5129342_1 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000001735 170.0
SYD3_k127_5214133_0 Glutamine amidotransferases class-II K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000908 580.0
SYD3_k127_5214133_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009358 505.0
SYD3_k127_5214133_2 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007696 400.0
SYD3_k127_5214133_3 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000003019 234.0
SYD3_k127_5214133_4 Belongs to the peptidase M16 family - - - 0.000000000000000000000000000009164 121.0
SYD3_k127_5214133_5 Belongs to the UPF0758 family K03630 - - 0.0000000000000025 83.0
SYD3_k127_5272898_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 2.4e-244 786.0
SYD3_k127_5272898_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 487.0
SYD3_k127_5272898_10 Transglycosylase SLT domain K08307,K12204 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 316.0
SYD3_k127_5272898_11 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005811 274.0
SYD3_k127_5272898_12 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000002327 273.0
SYD3_k127_5272898_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001021 261.0
SYD3_k127_5272898_14 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.00000000000000000000000000000000000000000000000000000000000000000000004164 267.0
SYD3_k127_5272898_15 PFAM short-chain dehydrogenase reductase SDR - GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008667,GO:0009058,GO:0009237,GO:0009238,GO:0009239,GO:0009712,GO:0009713,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0016628,GO:0018130,GO:0018958,GO:0019184,GO:0019290,GO:0019438,GO:0019540,GO:0019748,GO:0022607,GO:0034641,GO:0042802,GO:0043043,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0046189,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 - 0.00000000000000000000000000000000000000000000000000000000000000000000009594 249.0
SYD3_k127_5272898_16 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008933 239.0
SYD3_k127_5272898_17 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000001224 252.0
SYD3_k127_5272898_18 AntiSigma factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000002371 241.0
SYD3_k127_5272898_19 Belongs to the purine pyrimidine phosphoribosyltransferase family. PyrR subfamily K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000001868 225.0
SYD3_k127_5272898_2 PFAM magnesium chelatase K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000345 479.0
SYD3_k127_5272898_20 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000002595 228.0
SYD3_k127_5272898_21 translation initiation inhibitor, yjgF family - - - 0.00000000000000000000000000000000000000000000000000000001157 201.0
SYD3_k127_5272898_22 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( ) K02823 - - 0.00000000000000000000000000000000000000000000000003188 190.0
SYD3_k127_5272898_23 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000000000000531 183.0
SYD3_k127_5272898_24 Cupin 2, conserved barrel - - - 0.00000000000000000000000000000000000000000000001964 180.0
SYD3_k127_5272898_25 Peptidase family M23 K21471 - - 0.0000000000000000000000000000000000000000000008363 177.0
SYD3_k127_5272898_26 PFAM CoA-binding domain protein K06929 - - 0.0000000000000000000000000000000000000000001195 171.0
SYD3_k127_5272898_27 Belongs to the acetyltransferase family. ArgA subfamily - - - 0.00000000000000000000000000000000000000163 162.0
SYD3_k127_5272898_28 Diacylglycerol kinase catalytic domain (presumed) - - - 0.0000000000000000000000000000000000003005 161.0
SYD3_k127_5272898_29 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000000000000000008982 116.0
SYD3_k127_5272898_3 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007263 496.0
SYD3_k127_5272898_30 - - - - 0.000000000000000000000000004864 128.0
SYD3_k127_5272898_31 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000006193 117.0
SYD3_k127_5272898_32 epimerase - - - 0.0000000000000000000000000157 111.0
SYD3_k127_5272898_33 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000004469 115.0
SYD3_k127_5272898_34 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000001333 118.0
SYD3_k127_5272898_35 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.00000000000000000005722 96.0
SYD3_k127_5272898_36 Domain of unknown function (DUF4177) - - - 0.0000000000000005323 79.0
SYD3_k127_5272898_37 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000003707 84.0
SYD3_k127_5272898_38 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0034641,GO:0042623,GO:0043142,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.000000000000543 70.0
SYD3_k127_5272898_39 snoRNA binding - - - 0.0000003481 59.0
SYD3_k127_5272898_4 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004244 456.0
SYD3_k127_5272898_40 COG0662 Mannose-6-phosphate isomerase - - - 0.0000008301 60.0
SYD3_k127_5272898_41 Protein of unknown function, DUF481 K07283 - - 0.000007279 57.0
SYD3_k127_5272898_42 Tetratricopeptide repeat - - - 0.00001513 57.0
SYD3_k127_5272898_43 protein containing caspase domain - - - 0.0001691 49.0
SYD3_k127_5272898_5 SAICAR synthetase K01923 - 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 394.0
SYD3_k127_5272898_6 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005197 399.0
SYD3_k127_5272898_7 Catalyzes the conversion of dihydroorotate to orotate with NAD( ) as electron acceptor K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002851 381.0
SYD3_k127_5272898_8 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 363.0
SYD3_k127_5272898_9 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 372.0
SYD3_k127_53272_0 Glycine cleavage system P-protein K00281 - 1.4.4.2 0.0 1239.0
SYD3_k127_53272_1 Angiotensin-converting enzyme K01283 - 3.4.15.1 1.135e-200 642.0
SYD3_k127_53272_10 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000001878 258.0
SYD3_k127_53272_11 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000003348 236.0
SYD3_k127_53272_12 peptidase U61 LD-carboxypeptidase A K01297 - 3.4.17.13 0.000000000000000000000000000000000000000000000000000000001764 214.0
SYD3_k127_53272_13 Peptidase family M50 K11749 - - 0.000000000000000000000000000000000000000000000000000007486 216.0
SYD3_k127_53272_14 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000000000000000001046 195.0
SYD3_k127_53272_15 PFAM EAL domain protein - - - 0.00000000000000000000000000000000000000000000004621 191.0
SYD3_k127_53272_16 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.00000000000000000000000000000000000000000004814 170.0
SYD3_k127_53272_17 PFAM ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000000000000001331 183.0
SYD3_k127_53272_18 Maf-like protein K06287 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0030145,GO:0036218,GO:0036221,GO:0042802,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0047429 - 0.0000000000000000000000000000000000000000001812 166.0
SYD3_k127_53272_19 ABC-type uncharacterized transport system K01992 - - 0.000000000000000000000000000000000000000003607 177.0
SYD3_k127_53272_2 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004464 430.0
SYD3_k127_53272_20 PFAM phosphatidate cytidylyltransferase K00981 - 2.7.7.41 0.00000000000000000000000000000000000005666 154.0
SYD3_k127_53272_21 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000003577 158.0
SYD3_k127_53272_22 nuclease activity - - - 0.000000000000000000000000000000001238 136.0
SYD3_k127_53272_23 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.00000000000000000000000000000001612 139.0
SYD3_k127_53272_24 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000002279 144.0
SYD3_k127_53272_25 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000005109 117.0
SYD3_k127_53272_26 Cytochrome c assembly protein - - - 0.000000000000000000000000006104 121.0
SYD3_k127_53272_27 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000001301 125.0
SYD3_k127_53272_28 Peptidase M56 - - - 0.00000000000000000000000684 117.0
SYD3_k127_53272_29 response regulator - - - 0.0000000000000000000001924 111.0
SYD3_k127_53272_3 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 399.0
SYD3_k127_53272_30 Helix-hairpin-helix motif K02237 - - 0.000000000000001391 81.0
SYD3_k127_53272_31 HEAT repeat - - - 0.00000000000002624 85.0
SYD3_k127_53272_32 Domain of unknown function (DUF4340) - - - 0.00000000000004428 87.0
SYD3_k127_53272_33 response regulator - - - 0.0000000000001082 80.0
SYD3_k127_53272_34 Transmembrane protein 260 - - - 0.0000000000002345 85.0
SYD3_k127_53272_35 Bacterial antitoxin of type II TA system, VapB - - - 0.000000000000411 72.0
SYD3_k127_53272_36 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.00000000003322 76.0
SYD3_k127_53272_37 5'-nucleotidase, C-terminal domain K01119 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.1.3.6,3.1.4.16 0.000000006903 66.0
SYD3_k127_53272_39 methyltransferase - - - 0.000004227 56.0
SYD3_k127_53272_4 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006426 382.0
SYD3_k127_53272_5 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 384.0
SYD3_k127_53272_6 PFAM Aminotransferase class I and II K00812,K10907 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003534 399.0
SYD3_k127_53272_7 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 346.0
SYD3_k127_53272_8 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 317.0
SYD3_k127_53272_9 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09697 - 3.6.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007759 304.0
SYD3_k127_5357374_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 4.261e-215 686.0
SYD3_k127_5357374_1 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 305.0
SYD3_k127_5357374_2 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000005103 255.0
SYD3_k127_5357374_3 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.000000000000000000000000000001499 139.0
SYD3_k127_5357374_4 low molecular weight K01104,K20201 - 3.1.3.48,3.9.1.2 0.000000000000000000000001848 117.0
SYD3_k127_5413387_0 Oxidoreductase molybdopterin binding K00387 - 1.8.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 350.0
SYD3_k127_5413387_1 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005082 352.0
SYD3_k127_5413387_10 Cysteine dioxygenase type I - - - 0.00000000000000000000000000000000000002332 151.0
SYD3_k127_5413387_11 PFAM Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000001353 162.0
SYD3_k127_5413387_12 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000001612 159.0
SYD3_k127_5413387_13 PFAM Sulphatase-modifying factor K20333 - - 0.00000000000000000000000000000000008703 148.0
SYD3_k127_5413387_14 Glycosyltransferase like family 2 - - - 0.000000000000000000004471 110.0
SYD3_k127_5413387_2 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 356.0
SYD3_k127_5413387_3 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006572 313.0
SYD3_k127_5413387_4 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000002466 256.0
SYD3_k127_5413387_5 SMART alpha amylase catalytic sub domain K01176 - 3.2.1.1 0.000000000000000000000000000000000000000000000000000003124 210.0
SYD3_k127_5413387_6 overlaps another CDS with the same product name - - - 0.00000000000000000000000000000000000000000000000000005192 214.0
SYD3_k127_5413387_7 Glycosyl transferase family group 2 - - - 0.0000000000000000000000000000000000000000000000000001291 198.0
SYD3_k127_5413387_8 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000422 195.0
SYD3_k127_5413387_9 ADP-glyceromanno-heptose 6-epimerase activity K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000001334 194.0
SYD3_k127_5450783_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 2.133e-257 823.0
SYD3_k127_5450783_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 392.0
SYD3_k127_5450783_10 lipopolysaccharide metabolic process K19804 - - 0.0000000000000000000000000000000000000000000000000000004082 211.0
SYD3_k127_5450783_11 Roadblock/LC7 domain - - - 0.00000000000000000000000000000000000000000000000000001089 193.0
SYD3_k127_5450783_12 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000008168 201.0
SYD3_k127_5450783_13 helix_turn_helix, mercury resistance K22491 - - 0.00000000000000000000000000000000000000000000001827 180.0
SYD3_k127_5450783_14 Thrombospondin type 3 - - - 0.0000000000000000000000000000000000000000000002293 194.0
SYD3_k127_5450783_15 Helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000005784 168.0
SYD3_k127_5450783_16 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.0000000000000000000000000000000000000004504 158.0
SYD3_k127_5450783_17 Helix-turn-helix domain - - - 0.00000000000000000000000000000000002539 144.0
SYD3_k127_5450783_18 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000008264 150.0
SYD3_k127_5450783_19 Thrombospondin type 3 repeat - - - 0.00000000000000000000000000000001138 148.0
SYD3_k127_5450783_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 383.0
SYD3_k127_5450783_20 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000001291 140.0
SYD3_k127_5450783_21 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.0000000000000000000000000000005215 128.0
SYD3_k127_5450783_22 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.0000000000000000000000000138 112.0
SYD3_k127_5450783_23 Peptidyl-prolyl cis-trans isomerase K03768 - 5.2.1.8 0.000000000000000000000001347 120.0
SYD3_k127_5450783_24 Competence protein - - - 0.0000000000000000000001427 109.0
SYD3_k127_5450783_25 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000002914 104.0
SYD3_k127_5450783_26 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000002689 94.0
SYD3_k127_5450783_27 alginic acid biosynthetic process K01729,K17713 - 4.2.2.3 0.0000000000000000213 98.0
SYD3_k127_5450783_28 amine dehydrogenase activity - - - 0.0000000002046 72.0
SYD3_k127_5450783_29 Resolvase, N terminal domain - - - 0.000000003025 66.0
SYD3_k127_5450783_3 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 382.0
SYD3_k127_5450783_30 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.0000001234 56.0
SYD3_k127_5450783_31 HPr kinase - - - 0.00001611 57.0
SYD3_k127_5450783_4 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 370.0
SYD3_k127_5450783_5 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 385.0
SYD3_k127_5450783_6 Flavin containing amine oxidoreductase K06955 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005346 335.0
SYD3_k127_5450783_7 ADP-ribosylation factor family K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 298.0
SYD3_k127_5450783_8 response regulator K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009504 287.0
SYD3_k127_5450783_9 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001597 247.0
SYD3_k127_5455699_0 RibD C-terminal domain - - - 0.00000000000000000000000000000001105 131.0
SYD3_k127_5455699_1 RibD C-terminal domain - - - 0.000000000000000000000000003337 112.0
SYD3_k127_5471549_0 cellulose binding - - - 0.0 1334.0
SYD3_k127_5471549_1 Cytochrome C assembly protein - - - 8.435e-292 916.0
SYD3_k127_5471549_10 6 heme-binding sites - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008815 350.0
SYD3_k127_5471549_11 Zn-dependent protease contains TPR repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 306.0
SYD3_k127_5471549_12 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004805 313.0
SYD3_k127_5471549_13 PPIC-type PPIASE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 316.0
SYD3_k127_5471549_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 320.0
SYD3_k127_5471549_15 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000005481 252.0
SYD3_k127_5471549_16 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000001062 238.0
SYD3_k127_5471549_17 Peptidase S9, prolyl oligopeptidase active site domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000566 245.0
SYD3_k127_5471549_18 Putative bacterial lipoprotein (DUF799) - - - 0.0000000000000000000000000000000000000000000000000000000001369 209.0
SYD3_k127_5471549_19 Nitrogen fixation master sensor histidine kinase, PAS domain-containing K02668,K07708,K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000003411 226.0
SYD3_k127_5471549_2 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 1.849e-227 719.0
SYD3_k127_5471549_20 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000001835 209.0
SYD3_k127_5471549_21 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000004577 192.0
SYD3_k127_5471549_22 - - - - 0.000000000000000000000000000000000000000000000009608 186.0
SYD3_k127_5471549_23 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000002031 155.0
SYD3_k127_5471549_24 Prolyl oligopeptidase family - - - 0.0000000000000000000000000000000749 145.0
SYD3_k127_5471549_25 - - - - 0.00000000000000000000000000000009423 144.0
SYD3_k127_5471549_26 transferase activity, transferring acyl groups K03824 - - 0.0000000000000000000000000007012 121.0
SYD3_k127_5471549_27 oxidoreductase activity K00337,K03333,K04771,K07114 - 1.1.3.6,1.6.5.3,3.4.21.107 0.000000000000000002543 102.0
SYD3_k127_5471549_28 Response regulator receiver - - - 0.000000000004267 73.0
SYD3_k127_5471549_29 general secretion pathway protein G K02456 - - 0.000002558 56.0
SYD3_k127_5471549_3 Cytochrome c3 - - - 3.185e-227 722.0
SYD3_k127_5471549_31 TonB-dependent siderophore receptor K16090 - - 0.00006949 51.0
SYD3_k127_5471549_4 Penicillin amidase K01434 - 3.5.1.11 3.044e-220 736.0
SYD3_k127_5471549_5 Involved in the tonB-independent uptake of proteins K03641 - - 3.443e-199 647.0
SYD3_k127_5471549_6 amino acid carrier protein K03310 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 614.0
SYD3_k127_5471549_7 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 526.0
SYD3_k127_5471549_8 Domains REC, sigma54 interaction, HTH8 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 490.0
SYD3_k127_5471549_9 SMART Tetratricopeptide - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 422.0
SYD3_k127_5528211_0 Type VI secretion protein, EvpB/VC_A0108, tail sheath K11900 - - 6.177e-259 804.0
SYD3_k127_5528211_1 alcohol dehydrogenase K00001 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 433.0
SYD3_k127_5528211_10 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000184 132.0
SYD3_k127_5528211_11 type VI secretion protein K11893 - - 0.000000000000000000000000000003103 140.0
SYD3_k127_5528211_12 Type VI secretion system effector, Hcp K11903 - - 0.00000000000000000000000000008979 121.0
SYD3_k127_5528211_13 sigma factor antagonist activity K04757 - 2.7.11.1 0.00000000000000000000011 109.0
SYD3_k127_5528211_14 regulation of DNA-templated transcription, elongation - - - 0.0000000000003406 78.0
SYD3_k127_5528211_15 Type VI secretion system protein DotU K11892 - - 0.00000000008812 76.0
SYD3_k127_5528211_16 6-phosphogluconolactonase activity - - - 0.000000002261 70.0
SYD3_k127_5528211_17 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0000002099 59.0
SYD3_k127_5528211_2 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005529 381.0
SYD3_k127_5528211_20 Uncharacterized protein conserved in bacteria (DUF2094) K11890 - - 0.0001558 53.0
SYD3_k127_5528211_3 ImpA, N-terminal, type VI secretion system K11902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002006 284.0
SYD3_k127_5528211_4 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005195 278.0
SYD3_k127_5528211_5 Type VI secretion system, VipA, VC_A0107 or Hcp2 K11901 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001584 262.0
SYD3_k127_5528211_6 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001498 238.0
SYD3_k127_5528211_7 Intracellular multiplication and human macrophage-killing K11891 - - 0.0000000000000000000000000000000000000000000000000000000002389 234.0
SYD3_k127_5528211_8 Protein of unknown function (DUF2959) - - - 0.00000000000000000000000000000000000000000000000000000003134 206.0
SYD3_k127_5528211_9 metal cluster binding K06940 - - 0.0000000000000000000000000000000000000000000000000000009492 196.0
SYD3_k127_5531051_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 1.187e-318 998.0
SYD3_k127_5531051_1 Transketolase, central region K00615 - 2.2.1.1 6.199e-270 874.0
SYD3_k127_5531051_10 Dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008008 274.0
SYD3_k127_5531051_11 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000001162 192.0
SYD3_k127_5531051_12 Serine hydrolase involved in the detoxification of formaldehyde - - - 0.00000000000000000000000000000000000000000001122 186.0
SYD3_k127_5531051_13 Peptidase family M1 domain - - - 0.0000000000000000000000000000000000000000005867 182.0
SYD3_k127_5531051_14 PFAM Peptidase M23 - - - 0.00000000000000000000000000000000000000004021 172.0
SYD3_k127_5531051_16 Thioredoxin - - - 0.000000000000001059 91.0
SYD3_k127_5531051_17 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000003035 89.0
SYD3_k127_5531051_2 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 4.73e-197 633.0
SYD3_k127_5531051_3 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009087 555.0
SYD3_k127_5531051_4 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03166 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004333 509.0
SYD3_k127_5531051_5 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001985 471.0
SYD3_k127_5531051_6 PFAM aminotransferase, class I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002324 396.0
SYD3_k127_5531051_7 PFAM Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003244 406.0
SYD3_k127_5531051_8 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003828 375.0
SYD3_k127_5531051_9 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000815 361.0
SYD3_k127_5538418_0 Pyridoxal-dependent decarboxylase conserved domain K01593 - 4.1.1.105,4.1.1.28 1.131e-212 670.0
SYD3_k127_5538418_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 4.216e-201 640.0
SYD3_k127_5538418_10 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000007223 214.0
SYD3_k127_5538418_11 Glucose-6-phosphate dehydrogenase subunit - - - 0.00000000000000000000000000000000002397 151.0
SYD3_k127_5538418_12 Acyl-transferase K00655 - 2.3.1.51 0.00000000000000000000000000000004032 147.0
SYD3_k127_5538418_13 Reverse transcriptase-like K02226,K22316 GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005488,GO:0006139,GO:0006401,GO:0006725,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016891,GO:0016893,GO:0017144,GO:0018130,GO:0019438,GO:0019439,GO:0032296,GO:0033013,GO:0033014,GO:0034641,GO:0034655,GO:0042364,GO:0042578,GO:0043170,GO:0043755,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046700,GO:0051186,GO:0051188,GO:0071667,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 3.1.26.4,3.1.3.73 0.0000000000000000000000000000002176 138.0
SYD3_k127_5538418_14 RNA recognition motif - - - 0.0000000000000000000000000000003242 129.0
SYD3_k127_5538418_15 Protein of unknown function (DUF456) K09793 - - 0.0000000000000000000000000000004257 127.0
SYD3_k127_5538418_16 Septum formation initiator K04074 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000005607 87.0
SYD3_k127_5538418_17 C4-type zinc ribbon domain K07164 - - 0.0000000000002168 79.0
SYD3_k127_5538418_19 Transposase - - - 0.0000000004093 63.0
SYD3_k127_5538418_2 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity K00819,K00821 GO:0003674,GO:0003824,GO:0004587,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016740,GO:0016769,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.6.1.11,2.6.1.13,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 548.0
SYD3_k127_5538418_20 Transposase - - - 0.00001893 50.0
SYD3_k127_5538418_21 Cytidylyltransferase family K00981 - 2.7.7.41 0.00007519 55.0
SYD3_k127_5538418_3 TIGRFAM 6-phosphogluconate dehydrogenase, decarboxylating K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003 407.0
SYD3_k127_5538418_4 membrane protein required for spore maturation in B.subtilis K06374 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 400.0
SYD3_k127_5538418_5 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004307 380.0
SYD3_k127_5538418_6 Protein export membrane protein K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006949 290.0
SYD3_k127_5538418_7 Secondary thiamine-phosphate synthase enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006879 247.0
SYD3_k127_5538418_8 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000001503 248.0
SYD3_k127_5538418_9 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000009997 229.0
SYD3_k127_5547885_0 Fumarase C C-terminus K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005502 582.0
SYD3_k127_5547885_1 phosphomannomutase K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006382 420.0
SYD3_k127_5547885_2 FAD linked oxidases, C-terminal domain K00803 - 2.5.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002331 284.0
SYD3_k127_5694478_0 Domain of unknown function (DUF1998) K02336,K06877 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 2.7.7.7 4.033e-289 920.0
SYD3_k127_5694478_1 Alpha-amylase domain K01176 - 3.2.1.1 1.473e-205 652.0
SYD3_k127_5694478_10 Binding-protein-dependent transport system inner membrane component K10110,K15772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 463.0
SYD3_k127_5694478_11 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332 464.0
SYD3_k127_5694478_12 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 426.0
SYD3_k127_5694478_13 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 410.0
SYD3_k127_5694478_14 C-terminal binding-module, SLH-like, of glucodextranase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007144 370.0
SYD3_k127_5694478_15 N-Acetylmuramoyl-L-alanine amidase K01448,K02172 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000001082 274.0
SYD3_k127_5694478_16 Outer membrane receptor for ferrienterochelin and colicins - - - 0.0000000000000000000000000000000000000001896 174.0
SYD3_k127_5694478_17 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000002632 166.0
SYD3_k127_5694478_18 Protein of unknown function (DUF1684) K09164 - - 0.0000000000000000000000000000000000006074 149.0
SYD3_k127_5694478_19 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000003529 131.0
SYD3_k127_5694478_2 Sugar ABC transporter permease K10109,K15770,K15771 - - 1.074e-201 647.0
SYD3_k127_5694478_20 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.0000000000000000000000003736 112.0
SYD3_k127_5694478_21 cellular component assembly - - - 0.000000000000000000000003636 117.0
SYD3_k127_5694478_22 PFAM NUDIX hydrolase K03574 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.6.1.55 0.00000000000000000000001375 108.0
SYD3_k127_5694478_23 regulatory protein, FmdB family - - - 0.0000000000000000003264 93.0
SYD3_k127_5694478_24 Belongs to the bacterial histone-like protein family K03530 - - 0.0000000000000000005508 89.0
SYD3_k127_5694478_25 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.00000000000000008958 94.0
SYD3_k127_5694478_26 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 6.3.5.6,6.3.5.7 0.0000000000078 77.0
SYD3_k127_5694478_27 Peptidase M56 - - - 0.000001448 63.0
SYD3_k127_5694478_28 TonB dependent receptor K02014 - - 0.0001295 55.0
SYD3_k127_5694478_3 Bacterial extracellular solute-binding protein K10108,K15770 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009071 598.0
SYD3_k127_5694478_4 Belongs to the ABC transporter superfamily K05816,K10112 - 3.6.3.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 525.0
SYD3_k127_5694478_5 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009388 517.0
SYD3_k127_5694478_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003915 499.0
SYD3_k127_5694478_7 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 484.0
SYD3_k127_5694478_8 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 456.0
SYD3_k127_5694478_9 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 458.0
SYD3_k127_5713341_0 nickel-dependent hydrogenase, large subunit K06281 - 1.12.99.6 3.408e-282 876.0
SYD3_k127_5713341_1 Belongs to the carbamoyltransferase HypF family K04656 - - 4.984e-238 758.0
SYD3_k127_5713341_10 PFAM Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 318.0
SYD3_k127_5713341_11 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 303.0
SYD3_k127_5713341_12 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000008973 264.0
SYD3_k127_5713341_13 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001742 245.0
SYD3_k127_5713341_14 PFAM RNA binding S1 domain protein K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000007584 246.0
SYD3_k127_5713341_15 YceI-like domain - - - 0.000000000000000000000000000000000000000000000000000000009802 223.0
SYD3_k127_5713341_16 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000002286 183.0
SYD3_k127_5713341_17 PFAM peptidase M52 hydrogen uptake protein K03605 - - 0.0000000000000000000000000000000000000000001588 168.0
SYD3_k127_5713341_18 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000001227 170.0
SYD3_k127_5713341_19 Vitamin K epoxide reductase family - - - 0.0000000000000000000000000000000000000009689 166.0
SYD3_k127_5713341_2 PFAM MMPL family K07003 - - 8.267e-227 726.0
SYD3_k127_5713341_20 Winged helix DNA-binding domain - - - 0.0000000000000000000000000000000000002838 146.0
SYD3_k127_5713341_21 HAMP domain K02482 - 2.7.13.3 0.000000000000000000000000000000001776 137.0
SYD3_k127_5713341_22 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000000000000006335 117.0
SYD3_k127_5713341_23 HupF/HypC family K04653 - - 0.000000000000000000001755 103.0
SYD3_k127_5713341_24 Methyltransferase domain - - - 0.000000000000007238 87.0
SYD3_k127_5713341_25 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.000000171 63.0
SYD3_k127_5713341_3 iron-nicotianamine transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 570.0
SYD3_k127_5713341_4 TIGRFAM hydrogenase expression formation protein HypD K04654 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 535.0
SYD3_k127_5713341_5 TIGRFAM hydrogenase (NiFe) small subunit (hydA) K06282,K18008 - 1.12.2.1,1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 520.0
SYD3_k127_5713341_6 hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 409.0
SYD3_k127_5713341_7 PFAM Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 377.0
SYD3_k127_5713341_8 TIGRFAM Hydrogenase accessory protein HypB K04652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004982 326.0
SYD3_k127_5713341_9 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008883 301.0
SYD3_k127_5734895_0 Transcription factor zinc-finger K09981 - - 0.0000000000000000000000000000000000000000000000000000001451 205.0
SYD3_k127_5734895_1 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000003772 189.0
SYD3_k127_5734895_2 FAD linked oxidase domain protein - - - 0.000000000000000000000000000002956 126.0
SYD3_k127_5734895_3 - - - - 0.00000000000000000000000004027 111.0
SYD3_k127_5751332_0 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006972 516.0
SYD3_k127_5751332_1 coenzyme F390 K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008464 374.0
SYD3_k127_5751332_3 Protein of unknown function DUF86 - - - 0.000000000000000000000000000000000000007375 156.0
SYD3_k127_5751332_4 nucleotidyltransferase activity - - - 0.0000000000000001464 94.0
SYD3_k127_5751332_5 Putative metal-binding motif - - - 0.00000000005301 76.0
SYD3_k127_5757863_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.956e-301 951.0
SYD3_k127_5757863_1 PFAM Type II secretion system protein E K02652 - - 1.615e-220 716.0
SYD3_k127_5757863_10 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I - - - 0.000000000000000000000000000000000000000000000000001609 199.0
SYD3_k127_5757863_11 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000001108 196.0
SYD3_k127_5757863_12 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.000000000000000000000000000000000000000000000001544 196.0
SYD3_k127_5757863_13 CarD-like/TRCF domain K07736 - - 0.0000000000000000000000000000000000000001269 157.0
SYD3_k127_5757863_14 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000001136 157.0
SYD3_k127_5757863_15 PFAM ATP-binding region ATPase domain protein K07709 - 2.7.13.3 0.0000000000000000000000000000000004266 153.0
SYD3_k127_5757863_16 Prokaryotic N-terminal methylation motif K02456 - - 0.000000000000000000000000000000002376 134.0
SYD3_k127_5757863_17 RNA polymerase sigma factor K03088 - - 0.0000000000000000000000000000005919 130.0
SYD3_k127_5757863_18 Fibronectin-binding A domain protein - - - 0.00000000000000000000000000004501 134.0
SYD3_k127_5757863_19 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000007049 125.0
SYD3_k127_5757863_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004965 503.0
SYD3_k127_5757863_20 Pilus assembly protein K02662 - - 0.0000000000000000000004502 108.0
SYD3_k127_5757863_21 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4 0.0000000000000001553 94.0
SYD3_k127_5757863_22 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000002094 91.0
SYD3_k127_5757863_23 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000001096 87.0
SYD3_k127_5757863_24 general secretion pathway protein K02456,K02650 - - 0.000000000364 70.0
SYD3_k127_5757863_25 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000002647 66.0
SYD3_k127_5757863_26 Tetratricopeptide repeat - - - 0.0000003531 64.0
SYD3_k127_5757863_28 PFAM Fimbrial assembly family protein K02663 - - 0.00005452 56.0
SYD3_k127_5757863_3 Oligopeptidase F K08602 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009052 509.0
SYD3_k127_5757863_4 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 456.0
SYD3_k127_5757863_5 Belongs to the peptidase M16 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004619 398.0
SYD3_k127_5757863_6 Type ii and iii secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008651 345.0
SYD3_k127_5757863_7 PFAM Type II secretion system F domain K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003898 282.0
SYD3_k127_5757863_8 ATPase of the ABC class - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003104 276.0
SYD3_k127_5757863_9 Calcineurin-like phosphoesterase K07099 - - 0.00000000000000000000000000000000000000000000000000000000000000001416 231.0
SYD3_k127_5764402_0 Cro/C1-type HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000005326 239.0
SYD3_k127_5764402_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000001602 193.0
SYD3_k127_5764402_2 RibD C-terminal domain - - - 0.000000000000000000000000001771 113.0
SYD3_k127_5774041_0 CoA binding domain K09181 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 523.0
SYD3_k127_5781621_0 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 542.0
SYD3_k127_5781621_1 Phosphoglycerate kinase K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006853 458.0
SYD3_k127_5781621_10 GGDEF domain' - - - 0.00000000000000000000000000000000000000000005066 178.0
SYD3_k127_5781621_11 Rhomboid family - - - 0.0000000000000000000000000000000000000000002213 169.0
SYD3_k127_5781621_12 Prokaryotic N-terminal methylation motif K02456 - - 0.000000000000000000000000000000000003399 147.0
SYD3_k127_5781621_13 Preprotein translocase SecG subunit K03075 - - 0.000000000000000000000002993 107.0
SYD3_k127_5781621_14 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000001592 100.0
SYD3_k127_5781621_16 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000003083 65.0
SYD3_k127_5781621_17 Tetratricopeptide repeat - - - 0.00000128 60.0
SYD3_k127_5781621_18 Histidine kinase - - - 0.00001035 55.0
SYD3_k127_5781621_19 PBS lyase HEAT-like repeat - - - 0.00002858 55.0
SYD3_k127_5781621_2 Elongation factor SelB, winged helix K03833 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 439.0
SYD3_k127_5781621_3 histidine kinase A domain protein K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003476 301.0
SYD3_k127_5781621_4 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000008411 267.0
SYD3_k127_5781621_5 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0008144,GO:0016829,GO:0016840,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:1901681,GO:1904047 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000004021 254.0
SYD3_k127_5781621_6 Belongs to the peptidase S8 family K17734 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007292 260.0
SYD3_k127_5781621_7 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000003015 210.0
SYD3_k127_5781621_8 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000006458 224.0
SYD3_k127_5781621_9 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.0000000000000000000000000000000000000000000000001001 198.0
SYD3_k127_57875_0 Putative esterase K07017 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004319 264.0
SYD3_k127_57875_1 Protein of unknown function (DUF533) - - - 0.00000000000001213 81.0
SYD3_k127_57875_2 Rhomboid family - - - 0.00000000002688 73.0
SYD3_k127_57875_3 aminotransferase class I and II - - - 0.000000006154 58.0
SYD3_k127_5790832_0 Belongs to the peptidase S51 family K05995 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 3.4.13.21 0.0000000000000000000000000000000000000000000000000000000000000000000328 252.0
SYD3_k127_5790832_1 Cytochrome C biogenesis protein transmembrane region - - - 0.0000000000000000000000000000000000000000000000000004148 197.0
SYD3_k127_5790832_2 - - - - 0.00000000000000008444 86.0
SYD3_k127_5794691_0 Phage Terminase - - - 1.988e-202 663.0
SYD3_k127_5794691_1 Phage portal protein, HK97 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 334.0
SYD3_k127_5794691_10 DNA binding - - - 0.0000000000000000000000001907 121.0
SYD3_k127_5794691_11 - - - - 0.0000000000000000002962 99.0
SYD3_k127_5794691_12 - - - - 0.00000000000001097 79.0
SYD3_k127_5794691_14 HNH endonuclease K07451 - - 0.0000000000105 74.0
SYD3_k127_5794691_15 Bacteriophage HK97-gp10, putative tail-component - - - 0.00000000002681 72.0
SYD3_k127_5794691_16 Transposase (IS116 IS110 IS902 family) - - - 0.00000000015 67.0
SYD3_k127_5794691_17 Phage head-tail joining protein - - - 0.00000000419 70.0
SYD3_k127_5794691_18 - - - - 0.000000004289 63.0
SYD3_k127_5794691_19 - - - - 0.000001444 58.0
SYD3_k127_5794691_2 Belongs to the N(4) N(6)-methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006991 312.0
SYD3_k127_5794691_3 Phage capsid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 316.0
SYD3_k127_5794691_4 - - - - 0.000000000000000000000000000000000000000000000000000000000005301 224.0
SYD3_k127_5794691_5 - - - - 0.000000000000000000000000000000000000000002059 170.0
SYD3_k127_5794691_6 Phage gp6-like head-tail connector protein - - - 0.0000000000000000000000000000000000001956 147.0
SYD3_k127_5794691_7 Phage terminase, small subunit - - - 0.0000000000000000000000000000000000002379 147.0
SYD3_k127_5794691_8 - - - - 0.0000000000000000000000000000000000002529 152.0
SYD3_k127_5794691_9 Belongs to the peptidase S14 family - - - 0.00000000000000000000000000000000007338 154.0
SYD3_k127_5824730_0 PFAM peptidase M61 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009854 599.0
SYD3_k127_5824730_1 Dehydrogenase E1 component K11381 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 567.0
SYD3_k127_5824730_10 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006962 355.0
SYD3_k127_5824730_11 Transmembrane secretion effector K08225 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004847 350.0
SYD3_k127_5824730_12 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001734 290.0
SYD3_k127_5824730_13 membrane-anchored protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000006068 244.0
SYD3_k127_5824730_14 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000000000005432 218.0
SYD3_k127_5824730_15 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000004873 199.0
SYD3_k127_5824730_16 Endoribonuclease L-PSP K04782 - 4.2.99.21 0.00000000000000000000000000000000000000000000000006038 183.0
SYD3_k127_5824730_17 Exopolysaccharide synthesis, ExoD - - - 0.0000000000000000000000000000000000000000000000002389 184.0
SYD3_k127_5824730_18 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902494,GO:1903600 4.3.3.6 0.0000000000000000000000000000000000000000000000006237 194.0
SYD3_k127_5824730_19 LexA-binding, inner membrane-associated putative hydrolase - - - 0.00000000000000000000000000000000000000000000918 171.0
SYD3_k127_5824730_2 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003493 542.0
SYD3_k127_5824730_21 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus K03624,K06140 - - 0.000000000000000000000000002647 117.0
SYD3_k127_5824730_22 - - - - 0.0000008127 61.0
SYD3_k127_5824730_23 - - - - 0.00001211 58.0
SYD3_k127_5824730_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 477.0
SYD3_k127_5824730_4 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 - 4.3.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 430.0
SYD3_k127_5824730_5 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 414.0
SYD3_k127_5824730_6 Belongs to the carbamate kinase family K00926 - 2.7.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005737 401.0
SYD3_k127_5824730_7 Alanine-glyoxylate amino-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 369.0
SYD3_k127_5824730_8 Transcriptional regulator K03717 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002668 358.0
SYD3_k127_5824730_9 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 368.0
SYD3_k127_583074_0 Bacterial regulatory protein, Fis family K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009068 409.0
SYD3_k127_5844738_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.431e-272 857.0
SYD3_k127_5844738_1 copper-translocating P-type ATPase K17686 - 3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 601.0
SYD3_k127_5844738_11 sequence-specific DNA binding - - - 0.0000002931 52.0
SYD3_k127_5844738_12 NfeD-like C-terminal, partner-binding K07403 - - 0.00003203 57.0
SYD3_k127_5844738_2 ATP-dependent helicase K03579 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003636 605.0
SYD3_k127_5844738_3 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 461.0
SYD3_k127_5844738_4 Alanine dehydrogenase/PNT, N-terminal domain K00290,K14157 - 1.5.1.7,1.5.1.8,1.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 407.0
SYD3_k127_5844738_5 Saccharopine dehydrogenase C-terminal domain K00293 - 1.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 411.0
SYD3_k127_5844738_6 Branched-chain amino acid transport system / permease component K01997,K11960 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 356.0
SYD3_k127_5844738_7 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 371.0
SYD3_k127_5844738_8 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006905 319.0
SYD3_k127_5844738_9 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006715 303.0
SYD3_k127_5881467_0 oligopeptide transport K03305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 312.0
SYD3_k127_5881467_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000001526 222.0
SYD3_k127_5881467_2 Transposase IS200 like - - - 0.0000000000000000000000000000000000000000000000001267 192.0
SYD3_k127_5881467_3 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000000006307 144.0
SYD3_k127_5881467_4 DNA-templated transcription, initiation K03088 - - 0.000000000001642 75.0
SYD3_k127_5881741_0 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000876 603.0
SYD3_k127_5881741_1 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000999 133.0
SYD3_k127_5881741_2 - - - - 0.000001047 61.0
SYD3_k127_5897095_0 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000000001184 205.0
SYD3_k127_5897095_1 PFAM von Willebrand factor type A K07114 - - 0.00000000000000000000000000001295 138.0
SYD3_k127_5897095_2 repeat-containing protein - - - 0.00000000001787 77.0
SYD3_k127_5897095_3 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00007396 54.0
SYD3_k127_5981247_0 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01667 - 4.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 600.0
SYD3_k127_5981247_1 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007317 477.0
SYD3_k127_5981247_10 Phospholipid methyltransferase - - - 0.00000000000000000002071 107.0
SYD3_k127_5981247_11 Protein of unknown function (DUF971) K03593 - - 0.00000000000000006133 94.0
SYD3_k127_5981247_12 serine threonine protein kinase - - - 0.000000000000000286 89.0
SYD3_k127_5981247_13 serine threonine protein kinase - - - 0.000000001607 69.0
SYD3_k127_5981247_14 Polymer-forming cytoskeletal - - - 0.00000006457 64.0
SYD3_k127_5981247_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 384.0
SYD3_k127_5981247_3 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0036094,GO:0042866,GO:0043436,GO:0043891,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005237 331.0
SYD3_k127_5981247_4 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001444 284.0
SYD3_k127_5981247_5 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000001551 164.0
SYD3_k127_5981247_6 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.0000000000000000000000000000000000007516 160.0
SYD3_k127_5981247_7 Lipid A Biosynthesis N-terminal domain - - - 0.0000000000000000000000000000000005525 133.0
SYD3_k127_5981247_8 von Willebrand factor (vWF) type A domain K07114 - - 0.0000000000000000000000000000001953 138.0
SYD3_k127_5981247_9 binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription this protein is involved in detoxification and protection against antimicrobial K03088 - - 0.0000000000000000000000000001045 128.0
SYD3_k127_5991154_0 aromatic amino acid beta-eliminating lyase threonine aldolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004348 432.0
SYD3_k127_5991154_1 PFAM Phosphomethylpyrimidine kinase type-1 K00941 - 2.7.1.49,2.7.4.7 0.00000000000000002576 93.0
SYD3_k127_5991154_2 Tetratricopeptide repeat - - - 0.0000000002106 68.0
SYD3_k127_5991154_3 PBS lyase HEAT-like repeat - - - 0.000000008199 65.0
SYD3_k127_6069468_0 Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 3.407e-228 745.0
SYD3_k127_6069468_1 DAHP synthetase I family K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 521.0
SYD3_k127_6069468_10 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K08319 - 1.1.1.31,1.1.1.411 0.0000000000000000000000000000000000000001153 163.0
SYD3_k127_6069468_11 cellulose binding - - - 0.000000000000000000000000000000000001544 161.0
SYD3_k127_6069468_12 Pkd domain containing protein K12567 - 2.7.11.1 0.00000000000000000000000000000000009738 155.0
SYD3_k127_6069468_13 4Fe-4S dicluster domain K00176 - 1.2.7.3 0.0000000000000000000000001714 117.0
SYD3_k127_6069468_14 4Fe-4S dicluster domain K03390,K16887,K18930,K22482 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000001912 106.0
SYD3_k127_6069468_16 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.00000000000000001359 85.0
SYD3_k127_6069468_17 Chemotaxis protein CheY K02479 - - 0.000000000000001473 85.0
SYD3_k127_6069468_18 FAD binding domain K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000001665 86.0
SYD3_k127_6069468_19 Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides K01784,K10011 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006040,GO:0006139,GO:0006725,GO:0006793,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009225,GO:0009226,GO:0009987,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016741,GO:0016742,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0022607,GO:0033319,GO:0033320,GO:0034214,GO:0034641,GO:0034654,GO:0036094,GO:0042221,GO:0042802,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046349,GO:0046483,GO:0046677,GO:0048037,GO:0048040,GO:0050662,GO:0050896,GO:0051259,GO:0051287,GO:0055086,GO:0055114,GO:0065003,GO:0070403,GO:0071704,GO:0071840,GO:0097159,GO:0099618,GO:0099619,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:2001313,GO:2001315 1.1.1.305,2.1.2.13,5.1.3.2 0.000000000237 72.0
SYD3_k127_6069468_2 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003159 511.0
SYD3_k127_6069468_21 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000004662 65.0
SYD3_k127_6069468_22 Lipopolysaccharide kinase (Kdo/WaaP) family K08884,K12132 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008360,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0022603,GO:0022604,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0036211,GO:0040007,GO:0042304,GO:0043085,GO:0043086,GO:0043170,GO:0043388,GO:0043412,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0051055,GO:0051098,GO:0051099,GO:0051101,GO:0051128,GO:0062012,GO:0062014,GO:0065007,GO:0065008,GO:0065009,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 2.7.11.1 0.00000003595 56.0
SYD3_k127_6069468_23 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K01179 - 3.2.1.4 0.0000002537 65.0
SYD3_k127_6069468_24 Chorismate mutase K00210,K04092,K04093,K14187 GO:0000166,GO:0003674,GO:0003824,GO:0004106,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006520,GO:0006558,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008977,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016020,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016853,GO:0016866,GO:0017144,GO:0019438,GO:0019752,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0070403,GO:0071704,GO:0071944,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 1.3.1.12,5.4.99.5 0.0000002746 53.0
SYD3_k127_6069468_25 Malate synthase K01638 - 2.3.3.9 0.0000006042 60.0
SYD3_k127_6069468_26 Peptidase C13 family - - - 0.00003577 55.0
SYD3_k127_6069468_27 COGs COG3947 Response regulator containing CheY-like receiver and SARP domains - - - 0.0009392 49.0
SYD3_k127_6069468_3 PFAM thiamine pyrophosphate enzyme K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007518 366.0
SYD3_k127_6069468_4 heterodisulfide reductase, subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000004035 256.0
SYD3_k127_6069468_5 arylamine N-acetyltransferase activity K00675 - 2.3.1.118 0.000000000000000000000000000000000000000000000000000000000000534 236.0
SYD3_k127_6069468_6 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000004005 216.0
SYD3_k127_6069468_7 long-chain fatty acid transporting porin activity K06076 - - 0.0000000000000000000000000000000000000000000000001023 205.0
SYD3_k127_6069468_8 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.00000000000000000000000000000000000000000003116 174.0
SYD3_k127_6069468_9 nucleic acid-binding protein contains PIN domain K18828 - - 0.00000000000000000000000000000000000000000004178 167.0
SYD3_k127_6084396_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 7.338e-232 739.0
SYD3_k127_6084396_1 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 345.0
SYD3_k127_6084396_2 Sodium:solute symporter family K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003818 316.0
SYD3_k127_6084396_3 EXOIII K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000001026 244.0
SYD3_k127_6084396_4 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000002522 155.0
SYD3_k127_6084396_5 Belongs to the UPF0301 (AlgH) family K07735 - - 0.00000000000000000000000000000000001103 148.0
SYD3_k127_6084396_6 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000001117 81.0
SYD3_k127_6084396_7 - - - - 0.00000000000245 78.0
SYD3_k127_6084396_8 cellulase activity K01387 - 3.4.24.3 0.00000000002361 77.0
SYD3_k127_6084396_9 guanyl-nucleotide exchange factor activity - - - 0.00000009618 65.0
SYD3_k127_6167797_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 491.0
SYD3_k127_6167797_1 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 340.0
SYD3_k127_6167797_10 Amino-transferase class IV K00826,K02619 - 2.6.1.42,4.1.3.38 0.000000000000000000000000000000000002038 158.0
SYD3_k127_6167797_11 deoxyhypusine monooxygenase activity - - - 0.0000001219 65.0
SYD3_k127_6167797_12 - - - - 0.0005003 45.0
SYD3_k127_6167797_2 component I K01665 - 2.6.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003293 286.0
SYD3_k127_6167797_3 TIGRFAM rfaE bifunctional protein, domain I - - - 0.00000000000000000000000000000000000000000000000000000000000000000004518 255.0
SYD3_k127_6167797_4 3-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000001438 246.0
SYD3_k127_6167797_5 D,d-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000000001793 238.0
SYD3_k127_6167797_6 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000001231 219.0
SYD3_k127_6167797_7 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000003296 212.0
SYD3_k127_6167797_8 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000005698 200.0
SYD3_k127_6167797_9 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.0000000000000000000000000000000000000000000006884 184.0
SYD3_k127_616856_0 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000001833 119.0
SYD3_k127_616856_1 Outer membrane receptor K02014 - - 0.000001146 62.0
SYD3_k127_6371131_0 transcription factor binding K02584 - - 1.836e-218 688.0
SYD3_k127_6371131_1 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 374.0
SYD3_k127_6371131_2 Berberine and berberine like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007272 250.0
SYD3_k127_6473066_0 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007222 365.0
SYD3_k127_6473066_1 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009081 298.0
SYD3_k127_656040_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.0 1458.0
SYD3_k127_656040_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.964e-244 783.0
SYD3_k127_656040_10 Phosphate transporter family K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000092 356.0
SYD3_k127_656040_11 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009995 356.0
SYD3_k127_656040_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 345.0
SYD3_k127_656040_13 Band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 339.0
SYD3_k127_656040_14 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005176 333.0
SYD3_k127_656040_15 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 326.0
SYD3_k127_656040_16 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003035 342.0
SYD3_k127_656040_17 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004749 329.0
SYD3_k127_656040_18 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000466 296.0
SYD3_k127_656040_19 Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000125 280.0
SYD3_k127_656040_2 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 2.826e-217 687.0
SYD3_k127_656040_20 Domains HisKA, HATPase_c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003049 266.0
SYD3_k127_656040_21 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001665 256.0
SYD3_k127_656040_22 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009986 257.0
SYD3_k127_656040_23 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000002666 245.0
SYD3_k127_656040_24 2 iron, 2 sulfur cluster binding K00334,K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000001403 190.0
SYD3_k127_656040_25 Protein of unknown function DUF47 K02039,K07220 - - 0.0000000000000000000000000000000000000000001231 184.0
SYD3_k127_656040_26 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000004705 166.0
SYD3_k127_656040_27 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.0000000000000000000000000000000000000008314 154.0
SYD3_k127_656040_28 bacteriocin transport K03561 - - 0.00000000000000000000000000000000002387 142.0
SYD3_k127_656040_29 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000001474 113.0
SYD3_k127_656040_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 496.0
SYD3_k127_656040_30 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000059 104.0
SYD3_k127_656040_31 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.000000000000000000001243 100.0
SYD3_k127_656040_32 - - - - 0.000000000005028 68.0
SYD3_k127_656040_33 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000004807 72.0
SYD3_k127_656040_34 Cellulose synthase operon protein C C-terminus (BCSC_C) K20543 - - 0.0000002031 64.0
SYD3_k127_656040_35 Yip1 domain - - - 0.0000002579 64.0
SYD3_k127_656040_36 Transcriptional regulator, DeoR family K21601 - - 0.00003679 52.0
SYD3_k127_656040_37 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.0001327 53.0
SYD3_k127_656040_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 485.0
SYD3_k127_656040_5 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008014 467.0
SYD3_k127_656040_6 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 414.0
SYD3_k127_656040_7 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 397.0
SYD3_k127_656040_8 formate dehydrogenase (NAD+) activity K00336 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 398.0
SYD3_k127_656040_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 356.0
SYD3_k127_6581253_0 Cytochrome C oxidase subunit II, periplasmic domain K00376 - 1.7.2.4 0.0 1097.0
SYD3_k127_6581253_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 6.365e-312 969.0
SYD3_k127_6581253_10 serine-type peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 314.0
SYD3_k127_6581253_11 PFAM Rieske 2Fe-2S domain K02636,K03886 - 1.10.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000003337 274.0
SYD3_k127_6581253_12 Belongs to the UPF0178 family K09768 - - 0.00000000000000000000000000000000000000000000000001184 183.0
SYD3_k127_6581253_13 KDPG and KHG aldolase - - - 0.0000000000000000000000000000000000000000000000001419 183.0
SYD3_k127_6581253_14 lipoprotein involved in nitrous oxide reduction - - - 0.000000000000000000000000000000000000000000002189 168.0
SYD3_k127_6581253_15 - - - - 0.0000000000000000000000000000000000226 141.0
SYD3_k127_6581253_16 Transcriptional regulator, Crp Fnr family - - - 0.00000000000000000000000000000000008528 144.0
SYD3_k127_6581253_19 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000005096 121.0
SYD3_k127_6581253_2 OPT oligopeptide transporter protein - - - 1.485e-270 845.0
SYD3_k127_6581253_20 - - - - 0.0000000000000296 78.0
SYD3_k127_6581253_21 Domain of unknown function (DUF4398) - - - 0.00002059 54.0
SYD3_k127_6581253_3 Phosphate acyltransferases K00655,K01897 - 2.3.1.51,6.2.1.3 2.926e-234 756.0
SYD3_k127_6581253_4 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 5.85e-220 689.0
SYD3_k127_6581253_5 Tricorn protease homolog K08676 - - 3.004e-218 717.0
SYD3_k127_6581253_6 Cytochrome c - - - 1.289e-203 641.0
SYD3_k127_6581253_7 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 610.0
SYD3_k127_6581253_8 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 567.0
SYD3_k127_6581253_9 Dehydrogenase K00248 - 1.3.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 504.0
SYD3_k127_661116_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000002481 181.0
SYD3_k127_661116_1 Phosphodiester glycosidase - - - 0.000000000000000000000000000000000000000003513 171.0
SYD3_k127_661116_2 Polysaccharide deacetylase - - - 0.000000000000000000000000002545 126.0
SYD3_k127_661116_3 - - - - 0.000000000000000000000002204 111.0
SYD3_k127_661116_4 Cytochrome c-type biogenesis protein K02200 - - 0.0004202 53.0
SYD3_k127_661116_5 Kazal-type serine protease inhibitor domain - - - 0.0004809 47.0
SYD3_k127_6612207_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1557.0
SYD3_k127_6612207_1 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 317.0
SYD3_k127_6612207_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 334.0
SYD3_k127_6612207_3 PAS sensor protein - - - 0.000000000000000000000000000000000000000000000000000000000202 204.0
SYD3_k127_6612207_4 hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000000000002 184.0
SYD3_k127_6612207_5 endopeptidase activity - - - 0.00000000000000818 84.0
SYD3_k127_6612207_6 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179 - 3.2.1.4 0.00000000009159 73.0
SYD3_k127_6741899_0 Capsular exopolysaccharide family K16554,K16692 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 361.0
SYD3_k127_6741899_1 Polysaccharide biosynthesis/export protein - - - 0.000000000000000000000000005649 128.0
SYD3_k127_6741899_2 O-Antigen ligase - - - 0.000000000000000003668 98.0
SYD3_k127_6745391_0 FAD linked oxidase domain protein - - - 0.0 1713.0
SYD3_k127_6745391_1 malic enzyme K00027,K00029 - 1.1.1.38,1.1.1.40 1.72e-204 660.0
SYD3_k127_6745391_2 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.000000000000000000000000000000000000000003492 181.0
SYD3_k127_6831835_0 Domain of Unknown Function (DUF748) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 559.0
SYD3_k127_6831835_1 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 370.0
SYD3_k127_6831835_2 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006823 348.0
SYD3_k127_6831835_3 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 287.0
SYD3_k127_6831835_4 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001444 284.0
SYD3_k127_6831835_5 methyltransferase K00563,K10947 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008270,GO:0008649,GO:0008757,GO:0008989,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0046872,GO:0046914,GO:0052912,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.187 0.000000000000000000000000000000000000000000000000000000000001396 221.0
SYD3_k127_6831835_6 Ami_3 K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000004158 211.0
SYD3_k127_6831835_7 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.00000000000000000000000000000000000000000000001142 188.0
SYD3_k127_6831835_8 PFAM Sporulation and spore germination - - - 0.00000000000006615 87.0
SYD3_k127_6844775_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168,K07479 GO:0003674,GO:0003824,GO:0003916,GO:0003917,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.2 1.438e-262 834.0
SYD3_k127_6844775_1 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 355.0
SYD3_k127_6844775_2 TIGRFAM DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002016 262.0
SYD3_k127_6844775_3 Cation efflux family - - - 0.00000000000000000000000000000000000000002567 164.0
SYD3_k127_6844775_4 Tetratricopeptide repeats - - - 0.0005317 53.0
SYD3_k127_6850030_0 PFAM Aspartate glutamate uridylate kinase K00947 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005166 414.0
SYD3_k127_6850030_1 TOBE domain K02017,K06857 - 3.6.3.29,3.6.3.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 417.0
SYD3_k127_6850030_10 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000007681 166.0
SYD3_k127_6850030_11 cold-shock protein K03704 - - 0.0000000000000000000000000000000002555 141.0
SYD3_k127_6850030_12 Diguanylate cyclase - - - 0.000000000000000000000000000000002869 147.0
SYD3_k127_6850030_13 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000006377 127.0
SYD3_k127_6850030_15 - - - - 0.000000000000000000006185 97.0
SYD3_k127_6850030_16 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000001286 86.0
SYD3_k127_6850030_2 Bacterial extracellular solute-binding protein K05772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 374.0
SYD3_k127_6850030_3 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 361.0
SYD3_k127_6850030_4 Binding-protein-dependent transport system inner membrane component K05773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 335.0
SYD3_k127_6850030_5 3-demethylubiquinone-9 3-methyltransferase K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 304.0
SYD3_k127_6850030_6 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002464 268.0
SYD3_k127_6850030_7 tRNA wobble cytosine modification - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002514 260.0
SYD3_k127_6850030_8 Beta-lactamase class C and other penicillin binding proteins K01286 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000301 260.0
SYD3_k127_6850030_9 Predicted membrane protein (DUF2254) - - - 0.0000000000000000000000000000000000000000000000000001341 207.0
SYD3_k127_6860065_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 634.0
SYD3_k127_6860065_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003123 368.0
SYD3_k127_6860065_10 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000007464 92.0
SYD3_k127_6860065_11 Hfq protein K03666 - - 0.0000000000000004877 81.0
SYD3_k127_6860065_12 Thioredoxin-like - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000006919 68.0
SYD3_k127_6860065_2 phosphate acetyltransferase K00625 - 2.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004178 276.0
SYD3_k127_6860065_3 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005751 273.0
SYD3_k127_6860065_4 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000009753 279.0
SYD3_k127_6860065_5 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000001286 258.0
SYD3_k127_6860065_6 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000002893 237.0
SYD3_k127_6860065_7 HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000007817 219.0
SYD3_k127_6860065_8 Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 0.00000000000000000000000000000000000000000000000449 181.0
SYD3_k127_6860065_9 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000001029 119.0
SYD3_k127_6868071_0 Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate K01782,K01825 GO:0003674,GO:0003824,GO:0003857,GO:0004165,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0008692,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0016856,GO:0016860,GO:0016863,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8 1.106e-265 835.0
SYD3_k127_6868071_1 ammonia-lyase activity K01745 - 4.3.1.3 3.365e-217 686.0
SYD3_k127_6868071_2 Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed K00632 - 2.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003192 546.0
SYD3_k127_6868071_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004941 439.0
SYD3_k127_6868071_4 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537 339.0
SYD3_k127_6868071_5 HMGL-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003484 312.0
SYD3_k127_6920125_0 Oligoendopeptidase f - - - 3.494e-219 714.0
SYD3_k127_6920125_1 DNA polymerase K02347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 560.0
SYD3_k127_6920125_10 PFAM Transglycosylase SLT domain K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 353.0
SYD3_k127_6920125_11 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 323.0
SYD3_k127_6920125_12 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 316.0
SYD3_k127_6920125_13 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 311.0
SYD3_k127_6920125_14 Voltage gated chloride channel K03281 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 317.0
SYD3_k127_6920125_15 Zn_pept - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001769 307.0
SYD3_k127_6920125_16 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001139 307.0
SYD3_k127_6920125_17 Zn_pept K05996 - 3.4.17.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000001325 295.0
SYD3_k127_6920125_18 membrane K08981 - - 0.00000000000000000000000000000000000000000000000000000000000000003994 244.0
SYD3_k127_6920125_19 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0030312,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000004521 250.0
SYD3_k127_6920125_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 503.0
SYD3_k127_6920125_20 selenocysteine lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000004721 254.0
SYD3_k127_6920125_21 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000015 218.0
SYD3_k127_6920125_22 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000003698 221.0
SYD3_k127_6920125_23 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000003772 219.0
SYD3_k127_6920125_24 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000209 194.0
SYD3_k127_6920125_25 HhH-GPD superfamily base excision DNA repair protein - - - 0.00000000000000000000000000000000000000000000000000192 206.0
SYD3_k127_6920125_26 pseudouridine synthase activity K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000005247 206.0
SYD3_k127_6920125_27 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.00000000000000000000000000000000000000000000005163 181.0
SYD3_k127_6920125_28 FIST C domain - GO:0008150,GO:0040007 - 0.0000000000000000000000000000000000000000000001426 193.0
SYD3_k127_6920125_29 Diacylglycerol kinase K07029 GO:0003674,GO:0003824,GO:0004143,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006643,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.107 0.0000000000000000000000000000000000000000000003076 181.0
SYD3_k127_6920125_3 Putative citrate transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004954 502.0
SYD3_k127_6920125_30 LytTr DNA-binding domain K02477,K07705,K21696 GO:0000156,GO:0000160,GO:0003674,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0023052,GO:0035556,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007 - 0.0000000000000000000000000000000000000000000004286 188.0
SYD3_k127_6920125_31 Uncharacterized ACR, COG1993 K09137 - - 0.00000000000000000000000000000000000000000001255 166.0
SYD3_k127_6920125_32 PFAM bifunctional deaminase-reductase domain protein K14654 - 1.1.1.302 0.0000000000000000000000000000000000000000000995 168.0
SYD3_k127_6920125_33 Methyltransferase domain K00588 - 2.1.1.104 0.000000000000000000000000000000000000004318 166.0
SYD3_k127_6920125_34 Histidine kinase K02478 - 2.7.13.3 0.00000000000000000000000000000000000001324 166.0
SYD3_k127_6920125_35 Probable molybdopterin binding domain - - - 0.0000000000000000000000000000001058 143.0
SYD3_k127_6920125_36 Tellurite resistance protein TehB - - - 0.0000000000000000000000000000003929 140.0
SYD3_k127_6920125_37 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000004531 137.0
SYD3_k127_6920125_38 Tetratricopeptide repeat - - - 0.0000000000000000000000000002368 134.0
SYD3_k127_6920125_39 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.00000000000000000000000004397 128.0
SYD3_k127_6920125_4 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008077 482.0
SYD3_k127_6920125_40 Bacterial PH domain K09167 - - 0.00000000000000000000000005364 116.0
SYD3_k127_6920125_41 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000009788 122.0
SYD3_k127_6920125_42 Polymer-forming cytoskeletal - - - 0.000000000000000000001125 111.0
SYD3_k127_6920125_43 CarboxypepD_reg-like domain K13276 - - 0.0000000000000000000138 109.0
SYD3_k127_6920125_44 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.0000000000000000001054 100.0
SYD3_k127_6920125_45 Rhodanese Homology Domain - - - 0.00000000000000049 92.0
SYD3_k127_6920125_46 Ubiquinone biosynthesis protein UbiA K02548 - 2.5.1.74 0.00000000000004126 83.0
SYD3_k127_6920125_47 Thrombospondin type 3 repeat K04659 GO:0000902,GO:0001932,GO:0001934,GO:0001936,GO:0001938,GO:0001968,GO:0002682,GO:0002684,GO:0002685,GO:0002687,GO:0002688,GO:0002690,GO:0003674,GO:0005102,GO:0005178,GO:0005488,GO:0005509,GO:0005515,GO:0005518,GO:0005539,GO:0005575,GO:0005576,GO:0005604,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005912,GO:0005924,GO:0005927,GO:0006928,GO:0006950,GO:0007155,GO:0007275,GO:0007399,GO:0007517,GO:0007610,GO:0008150,GO:0008201,GO:0008284,GO:0009653,GO:0009888,GO:0009893,GO:0009987,GO:0010562,GO:0010604,GO:0012505,GO:0014812,GO:0016043,GO:0016203,GO:0016477,GO:0016525,GO:0016528,GO:0016529,GO:0019220,GO:0019222,GO:0022008,GO:0022603,GO:0022607,GO:0022610,GO:0030030,GO:0030054,GO:0030055,GO:0030154,GO:0030182,GO:0030334,GO:0030335,GO:0031012,GO:0031175,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031594,GO:0032101,GO:0032103,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032879,GO:0032989,GO:0032990,GO:0032991,GO:0033554,GO:0033555,GO:0033627,GO:0034103,GO:0034976,GO:0035989,GO:0040011,GO:0040012,GO:0040017,GO:0042127,GO:0042325,GO:0042327,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043236,GO:0043237,GO:0043933,GO:0044085,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045202,GO:0045765,GO:0045937,GO:0046872,GO:0048265,GO:0048266,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048666,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050678,GO:0050679,GO:0050730,GO:0050731,GO:0050789,GO:0050793,GO:0050794,GO:0050839,GO:0050840,GO:0050896,GO:0050920,GO:0050921,GO:0051093,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051270,GO:0051272,GO:0051451,GO:0051674,GO:0051716,GO:0060255,GO:0060538,GO:0061061,GO:0061448,GO:0062023,GO:0065003,GO:0065007,GO:0070161,GO:0071603,GO:0071622,GO:0071624,GO:0071840,GO:0080090,GO:0090022,GO:0090023,GO:0090136,GO:0097367,GO:0098609,GO:0120036,GO:0120039,GO:1901342,GO:1901343,GO:1901681,GO:1902622,GO:1902624,GO:2000026,GO:2000145,GO:2000147,GO:2000181 - 0.0000000000001059 86.0
SYD3_k127_6920125_48 EamA-like transporter family K15268 - - 0.000000000004339 79.0
SYD3_k127_6920125_49 Belongs to the UPF0235 family K09131 - - 0.00000000001177 77.0
SYD3_k127_6920125_5 LytB protein K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 444.0
SYD3_k127_6920125_50 PFAM peptidase M4 thermolysin - - - 0.0000000000345 78.0
SYD3_k127_6920125_51 LVIVD repeat - - - 0.00000002873 68.0
SYD3_k127_6920125_52 Putative zinc-finger - - - 0.000003232 58.0
SYD3_k127_6920125_53 alpha beta hydrolase fold - - - 0.0001414 53.0
SYD3_k127_6920125_54 PFAM Colicin V production protein K03558 - - 0.0006382 49.0
SYD3_k127_6920125_6 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 411.0
SYD3_k127_6920125_7 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009233 408.0
SYD3_k127_6920125_8 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 384.0
SYD3_k127_6920125_9 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007498 334.0
SYD3_k127_6920364_0 Amp-dependent synthetase and ligase K00797,K01897 - 2.5.1.16,6.2.1.3 0.0 1135.0
SYD3_k127_6920364_1 PFAM Cl- channel voltage-gated family protein K03281 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008426 493.0
SYD3_k127_6920364_2 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 435.0
SYD3_k127_6920364_3 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 425.0
SYD3_k127_6920364_4 CAAX protease self-immunity K07052 - - 0.000000000001258 79.0
SYD3_k127_6934952_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1620.0
SYD3_k127_6934952_1 Tricorn protease homolog - - - 0.0 1380.0
SYD3_k127_6934952_10 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005386 278.0
SYD3_k127_6934952_11 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000002198 256.0
SYD3_k127_6934952_12 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000004756 257.0
SYD3_k127_6934952_13 PhoQ Sensor K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000007106 248.0
SYD3_k127_6934952_14 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001584 244.0
SYD3_k127_6934952_15 - - - - 0.000000000000000000000000000000000000000000000000000000000000000005571 259.0
SYD3_k127_6934952_16 metal cluster binding - - - 0.000000000000000000000000000000000000000000000000000000000000001247 236.0
SYD3_k127_6934952_17 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000004643 228.0
SYD3_k127_6934952_19 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000003501 203.0
SYD3_k127_6934952_2 DNA RNA helicase - - - 1.467e-243 779.0
SYD3_k127_6934952_20 Universal stress protein family - - - 0.00000000000000000000000000000000005742 152.0
SYD3_k127_6934952_21 Hfq protein - - - 0.0000000000000000000000000000000005669 138.0
SYD3_k127_6934952_22 AMP binding - - - 0.0000000000000000000000000626 116.0
SYD3_k127_6934952_23 ECF sigma factor - - - 0.000000000000000000000005772 108.0
SYD3_k127_6934952_24 PFAM pyridoxamine 5'-phosphate oxidase-related, FMN-binding K07226 - - 0.0000000000000000000000219 106.0
SYD3_k127_6934952_25 Peptidylprolyl isomerase K01802 - 5.2.1.8 0.00000000000000000002636 102.0
SYD3_k127_6934952_26 TIGRFAM RecB family nuclease - - - 0.0000000000000000402 95.0
SYD3_k127_6934952_27 Domain of unknown function (DUF4252) - - - 0.00000000000002179 86.0
SYD3_k127_6934952_28 Putative zinc-finger - - - 0.000001722 59.0
SYD3_k127_6934952_3 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 6.835e-203 646.0
SYD3_k127_6934952_4 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003635 517.0
SYD3_k127_6934952_5 response regulator K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007342 497.0
SYD3_k127_6934952_6 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009729 406.0
SYD3_k127_6934952_7 Histidine kinase K07641,K07711 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0031667,GO:0035556,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 387.0
SYD3_k127_6934952_8 Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002195 288.0
SYD3_k127_6934952_9 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005931 275.0
SYD3_k127_7060704_0 transcription factor binding K15836 - - 1.206e-222 710.0
SYD3_k127_7060704_1 hydroxymethylglutaryl-CoA reductase (NADPH) activity K00021 - 1.1.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008388 606.0
SYD3_k127_7060704_10 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000002795 283.0
SYD3_k127_7060704_11 PFAM Peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001639 251.0
SYD3_k127_7060704_12 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000001532 245.0
SYD3_k127_7060704_13 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000008784 228.0
SYD3_k127_7060704_14 AAA domain - - - 0.0000000000000000000000000000000000000000000000000002177 208.0
SYD3_k127_7060704_15 cyclic nucleotide binding K10914 - - 0.0000000000000000000000000000000000000000000000003725 192.0
SYD3_k127_7060704_16 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000007902 198.0
SYD3_k127_7060704_17 peptidase m48, ste24p - - - 0.00000000000000000000000000000000000000000002956 177.0
SYD3_k127_7060704_18 AI-2E family transporter - - - 0.00000000000000000000000000000000000000453 165.0
SYD3_k127_7060704_19 - - - - 0.0000000000000000000000000000000000009808 147.0
SYD3_k127_7060704_2 PFAM Nickel-dependent hydrogenase, large subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000968 546.0
SYD3_k127_7060704_20 Anion-transporting ATPase K01551 - 3.6.3.16 0.000000000000000000000000001243 124.0
SYD3_k127_7060704_21 Hydrogenase maturation protease K03605 - - 0.000000000000000000000105 113.0
SYD3_k127_7060704_22 PFAM nuclease (SNase domain protein) K01174 - 3.1.31.1 0.000000000000000000001162 102.0
SYD3_k127_7060704_23 PHB accumulation regulatory domain - - - 0.000000000000000006223 89.0
SYD3_k127_7060704_24 Uncharacterized protein conserved in bacteria (DUF2188) - - - 0.0000000000001119 76.0
SYD3_k127_7060704_25 - - - - 0.000000000000749 79.0
SYD3_k127_7060704_3 ABC1 family K03688 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016020,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901576,GO:1901661,GO:1901663 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005375 548.0
SYD3_k127_7060704_4 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 415.0
SYD3_k127_7060704_5 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 387.0
SYD3_k127_7060704_6 esterase of the alpha-beta hydrolase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008352 360.0
SYD3_k127_7060704_7 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005877 335.0
SYD3_k127_7060704_8 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004509 351.0
SYD3_k127_7060704_9 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 318.0
SYD3_k127_7109928_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 2.367e-255 806.0
SYD3_k127_7109928_1 PFAM Type II secretion system protein E K02454,K02504,K02652 - - 1.847e-250 785.0
SYD3_k127_7109928_10 Two component, sigma54 specific, transcriptional regulator, Fis family K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003308 463.0
SYD3_k127_7109928_11 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 404.0
SYD3_k127_7109928_12 Secretin and TonB N terminus short domain K02666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 364.0
SYD3_k127_7109928_13 pilus assembly protein K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006067 328.0
SYD3_k127_7109928_14 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 319.0
SYD3_k127_7109928_15 protoporphyrinogen oxidase activity K01854 - 5.4.99.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 324.0
SYD3_k127_7109928_16 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005847 342.0
SYD3_k127_7109928_17 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 307.0
SYD3_k127_7109928_18 phospho-N-acetylmuramoyl-pentapeptide-transferase activity K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 314.0
SYD3_k127_7109928_19 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001589 299.0
SYD3_k127_7109928_2 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004716 593.0
SYD3_k127_7109928_20 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000166 292.0
SYD3_k127_7109928_21 phosphorelay sensor kinase activity K02668 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002394 295.0
SYD3_k127_7109928_22 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000006021 266.0
SYD3_k127_7109928_23 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0001871,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005623,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0019538,GO:0030246,GO:0030247,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065 - 0.000000000000000000000000000000000000000000000000000000000000006167 239.0
SYD3_k127_7109928_24 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000001659 212.0
SYD3_k127_7109928_25 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000001925 226.0
SYD3_k127_7109928_26 Methyltransferase FkbM domain - - - 0.0000000000000000000000000000000000000000000000000000000002504 213.0
SYD3_k127_7109928_27 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000457 224.0
SYD3_k127_7109928_28 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000003213 199.0
SYD3_k127_7109928_29 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0070180,GO:0071704,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 - 0.000000000000000000000000000000000000000000000000000003819 195.0
SYD3_k127_7109928_3 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005988 548.0
SYD3_k127_7109928_30 - - - - 0.00000000000000000000000000000000000000000000000000004398 207.0
SYD3_k127_7109928_31 Glycosyltransferase like family 2 K07011 - - 0.000000000000000000000000000000000000000000000000003956 205.0
SYD3_k127_7109928_32 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000002012 204.0
SYD3_k127_7109928_33 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000001461 194.0
SYD3_k127_7109928_34 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000001791 169.0
SYD3_k127_7109928_35 Nitrogen fixation master sensor histidine kinase, PAS domain-containing K02668,K07708,K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000004062 181.0
SYD3_k127_7109928_36 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000008553 179.0
SYD3_k127_7109928_37 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.000000000000000000000000000000000000002407 169.0
SYD3_k127_7109928_38 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000008727 160.0
SYD3_k127_7109928_39 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000002431 143.0
SYD3_k127_7109928_4 asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006047 533.0
SYD3_k127_7109928_40 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000005211 139.0
SYD3_k127_7109928_41 Prokaryotic N-terminal methylation motif K02456 - - 0.000000000000000000000000008176 116.0
SYD3_k127_7109928_42 Glycosyltransferase - - - 0.00000000000000000000000002121 128.0
SYD3_k127_7109928_43 Glycosyltransferase like family 2 - - - 0.000000000000000000009147 103.0
SYD3_k127_7109928_44 Pilus assembly protein, PilO K02664 - - 0.0000000000000000000968 99.0
SYD3_k127_7109928_45 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000001493 84.0
SYD3_k127_7109928_46 translation elongation factor activity K02358,K15771 GO:0001666,GO:0001817,GO:0001819,GO:0002791,GO:0002793,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0006950,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009274,GO:0009275,GO:0009628,GO:0009986,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0010339,GO:0010467,GO:0016020,GO:0019538,GO:0019899,GO:0022610,GO:0030312,GO:0032677,GO:0032757,GO:0032879,GO:0032880,GO:0034641,GO:0034645,GO:0035375,GO:0035821,GO:0036293,GO:0040007,GO:0042221,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044003,GO:0044068,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044403,GO:0044406,GO:0044419,GO:0044424,GO:0044426,GO:0044444,GO:0044462,GO:0044464,GO:0044650,GO:0044651,GO:0048518,GO:0048522,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051701,GO:0051704,GO:0051817,GO:0065007,GO:0070201,GO:0070482,GO:0071704,GO:0071944,GO:0090087,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903530,GO:1903532,GO:1904951,GO:2000482,GO:2000484 - 0.000000000000005392 77.0
SYD3_k127_7109928_47 Fimbrial assembly protein (PilN) K02663 - - 0.00000000000006073 80.0
SYD3_k127_7109928_48 Polysaccharide biosynthesis protein - - - 0.0000000000005154 81.0
SYD3_k127_7109928_49 PA14 domain - - - 0.0000000001415 76.0
SYD3_k127_7109928_5 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 477.0
SYD3_k127_7109928_51 Methyltransferase - - - 0.00000004959 67.0
SYD3_k127_7109928_54 -O-antigen - - - 0.00001104 58.0
SYD3_k127_7109928_55 protein transport across the cell outer membrane K02246,K08084 - - 0.00005327 53.0
SYD3_k127_7109928_56 - - - - 0.0001261 49.0
SYD3_k127_7109928_57 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K03074,K12257 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0002416 44.0
SYD3_k127_7109928_58 -O-antigen K02847,K13009 - - 0.0003157 55.0
SYD3_k127_7109928_6 PFAM Type II secretion system F domain K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004289 476.0
SYD3_k127_7109928_7 oxidoreductase K10219 - 1.1.1.312 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000409 491.0
SYD3_k127_7109928_8 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 461.0
SYD3_k127_7109928_9 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 451.0
SYD3_k127_7126230_0 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008264 429.0
SYD3_k127_7126230_1 heat shock protein binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 402.0
SYD3_k127_7126230_2 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 338.0
SYD3_k127_7126230_3 Pyridine nucleotide-disulphide oxidoreductase K00384,K21567 - 1.18.1.2,1.19.1.1,1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005153 325.0
SYD3_k127_7126230_4 PFAM response regulator receiver K07667 - - 0.000000000000000000000000000000000000000000000000001586 195.0
SYD3_k127_7126230_5 dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000001496 180.0
SYD3_k127_7126230_6 ferredoxin-NADP+ reductase activity - - - 0.0000000000000000000000000000000002033 145.0
SYD3_k127_7126230_7 PFAM glycosyl transferase family 2 - - - 0.000000000000000000000000000000001036 151.0
SYD3_k127_7126230_8 hopanoid biosynthesis associated protein HpnK - - - 0.000000000000000000000000006395 128.0
SYD3_k127_7145166_0 peptidase K01278 - 3.4.14.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000751 441.0
SYD3_k127_7145166_1 Tetratricopeptide repeat - - - 0.000000000000000000002146 97.0
SYD3_k127_7204475_0 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003685 581.0
SYD3_k127_7204475_1 TIGRFAM cytochrome oxidase maturation protein, cbb3-type - - - 0.00000000000000000001885 97.0
SYD3_k127_7242303_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1367.0
SYD3_k127_7242303_1 FeS assembly protein SufB K07033,K09014 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006790,GO:0008150,GO:0008152,GO:0009536,GO:0009842,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0071840 - 1.269e-264 824.0
SYD3_k127_7242303_10 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003273 338.0
SYD3_k127_7242303_11 Amidinotransferase K01478 - 3.5.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001353 292.0
SYD3_k127_7242303_12 imidazolonepropionase activity K01443 - 3.5.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000002752 263.0
SYD3_k127_7242303_13 SUF system FeS assembly protein K04488 - - 0.00000000000000000000000000000000000000000001196 187.0
SYD3_k127_7242303_14 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.00000000000000000000000000000000000000006365 169.0
SYD3_k127_7242303_15 AcrB/AcrD/AcrF family K03296 - - 0.0000000000000000000000000000000000000005471 168.0
SYD3_k127_7242303_16 2 iron, 2 sulfur cluster binding - - - 0.00000000000000000000000000000000000174 145.0
SYD3_k127_7242303_17 Haemolysin-type calcium-binding repeat (2 copies) K03641,K11005 - - 0.000000000000000000000000000000000005754 156.0
SYD3_k127_7242303_18 DoxX-like family - - - 0.00000000000000000000000000000008672 129.0
SYD3_k127_7242303_19 Pfam:DUF59 K02612 - - 0.00000000000000000000000000001162 131.0
SYD3_k127_7242303_2 COG1228 Imidazolonepropionase and related K01443 - 3.5.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 642.0
SYD3_k127_7242303_20 40-residue YVTN family beta-propeller repeat - - - 0.00000000000000000000000006047 118.0
SYD3_k127_7242303_21 RNA-DNA hybrid ribonuclease activity K03470,K03471 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000003987 110.0
SYD3_k127_7242303_22 - - - - 0.000000002012 71.0
SYD3_k127_7242303_23 chlorophyll binding K16191,K20276 - - 0.000000244 61.0
SYD3_k127_7242303_24 Ribosomally synthesized peptide prototyped by Frankia Franean1_4349. - - - 0.0003134 46.0
SYD3_k127_7242303_3 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005985 516.0
SYD3_k127_7242303_4 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 434.0
SYD3_k127_7242303_5 epoxide hydrolase K01253 - 3.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004644 411.0
SYD3_k127_7242303_6 ABC transporter K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005806 399.0
SYD3_k127_7242303_7 TIGRFAM FeS assembly ATPase SufC K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009173 400.0
SYD3_k127_7242303_8 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 345.0
SYD3_k127_7242303_9 Uncharacterized protein family (UPF0051) K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 348.0
SYD3_k127_7243433_0 CorA-like Mg2+ transporter protein K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 328.0
SYD3_k127_7243433_1 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 327.0
SYD3_k127_7243433_2 cellulase activity - - - 0.0000000000000000000000000000000000000002037 173.0
SYD3_k127_7243433_3 Subtilase family - - - 0.000000000000000000000000002033 131.0
SYD3_k127_7243433_4 COG3209 Rhs family protein - - - 0.00000000000000001843 98.0
SYD3_k127_7243433_5 Glycosyl hydrolases family 38 N-terminal domain - - - 0.0000007759 60.0
SYD3_k127_7243433_6 Alginate lyase - - - 0.000007604 60.0
SYD3_k127_729353_0 Domain of unknown function (DUF4162) K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 336.0
SYD3_k127_729353_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007655 313.0
SYD3_k127_729353_10 - - - - 0.0000002274 63.0
SYD3_k127_729353_2 Carbon-nitrogen hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004505 273.0
SYD3_k127_729353_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005966 253.0
SYD3_k127_729353_4 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000003094 233.0
SYD3_k127_729353_5 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000006358 212.0
SYD3_k127_729353_6 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000027 198.0
SYD3_k127_729353_7 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0070930,GO:0071704,GO:1901564 - 0.0000000000000000000000000000000000000000000997 182.0
SYD3_k127_729353_8 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744,K09774,K22110 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0006810,GO:0008150,GO:0008643,GO:0008645,GO:0009279,GO:0015267,GO:0015288,GO:0015749,GO:0015750,GO:0015751,GO:0015757,GO:0016020,GO:0019867,GO:0022803,GO:0022829,GO:0022857,GO:0030312,GO:0030313,GO:0031975,GO:0034219,GO:0044462,GO:0044464,GO:0046323,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:1904659 - 0.0000000000000000000000000000000000000000001889 177.0
SYD3_k127_729353_9 - - - - 0.0000000000000000000000000000000004682 143.0
SYD3_k127_7304555_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004903 388.0
SYD3_k127_7304555_1 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000001213 141.0
SYD3_k127_7319679_0 Patatin-like phospholipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 509.0
SYD3_k127_7319679_1 Protein of unknown function (DUF1016) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 446.0
SYD3_k127_7319679_11 histone H2A K63-linked ubiquitination K02283 - - 0.000000000004698 79.0
SYD3_k127_7319679_12 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.0000000151 61.0
SYD3_k127_7319679_2 Protein kinase domain K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000737 241.0
SYD3_k127_7319679_3 Protein of unknown function (DUF433) - - - 0.000000000000000000000000000000000000000000000000000000001095 211.0
SYD3_k127_7319679_4 Plasmid pRiA4b ORF-3-like protein - - - 0.000000000000000000000000000000000000000000000000006024 189.0
SYD3_k127_7319679_5 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000008607 161.0
SYD3_k127_7319679_6 - - - - 0.00000000000000000000000000000005752 139.0
SYD3_k127_7319679_7 - K01865 - 5.4.4.1 0.0000000000000000000000001414 113.0
SYD3_k127_7319679_8 - - - - 0.000000000000000000009287 98.0
SYD3_k127_7319679_9 Tetratricopeptide repeat - - - 0.0000000000000001149 94.0
SYD3_k127_7420426_0 Glutamine synthetase type III K01915 - 6.3.1.2 9.557e-256 800.0
SYD3_k127_7420426_1 Highly conserved protein containing a thioredoxin domain - - - 0.000000000000000000000000000000000000000002124 169.0
SYD3_k127_7433175_0 belongs to the CobB CobQ family K13788 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006083,GO:0006084,GO:0006085,GO:0006091,GO:0006113,GO:0006139,GO:0006163,GO:0006164,GO:0006520,GO:0006566,GO:0006567,GO:0006629,GO:0006631,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008959,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009068,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015980,GO:0016053,GO:0016054,GO:0016407,GO:0016740,GO:0016746,GO:0016747,GO:0016999,GO:0017000,GO:0017001,GO:0017144,GO:0018130,GO:0019413,GO:0019427,GO:0019438,GO:0019541,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0042737,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045733,GO:0046390,GO:0046394,GO:0046395,GO:0046459,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0070689,GO:0071616,GO:0071704,GO:0072329,GO:0072330,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606 2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 527.0
SYD3_k127_743367_0 glutamate-tRNA ligase activity K01886 GO:0003674,GO:0003824,GO:0004812,GO:0004819,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006425,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.18 7.128e-249 780.0
SYD3_k127_743367_1 Alpha-amylase domain K01176 - 3.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 580.0
SYD3_k127_743367_10 PFAM ribonucleotide reductase K00526 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 306.0
SYD3_k127_743367_11 histidine kinase A domain protein K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 312.0
SYD3_k127_743367_12 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840,K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000471 284.0
SYD3_k127_743367_13 region 4 type 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002322 273.0
SYD3_k127_743367_14 peroxiredoxin activity K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000005388 245.0
SYD3_k127_743367_15 Tetracyclin repressor, C-terminal all-alpha domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001103 239.0
SYD3_k127_743367_16 DNA binding - - - 0.00000000000000000000000000000000000000000000000000000000223 213.0
SYD3_k127_743367_17 Predicted integral membrane protein (DUF2270) - - - 0.0000000000000000000000000000000000000000000000006394 183.0
SYD3_k127_743367_18 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.0000000000000000000000000000000001756 152.0
SYD3_k127_743367_19 - - - - 0.0000000000000000000001944 102.0
SYD3_k127_743367_2 RESPONSE REGULATOR receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 567.0
SYD3_k127_743367_21 RESPONSE REGULATOR receiver - - - 0.00000001451 63.0
SYD3_k127_743367_3 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004507 539.0
SYD3_k127_743367_4 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005726 541.0
SYD3_k127_743367_5 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008760,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016765,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003401 483.0
SYD3_k127_743367_6 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 449.0
SYD3_k127_743367_7 PFAM Alcohol dehydrogenase K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006587 379.0
SYD3_k127_743367_8 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 365.0
SYD3_k127_743367_9 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009573 345.0
SYD3_k127_759114_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370 - 1.7.5.1 0.0 1607.0
SYD3_k127_759114_1 TIGRFAM nitrate reductase, beta subunit K00371 - 1.7.5.1 4.297e-197 627.0
SYD3_k127_759114_10 Sulfatase K01133 - 3.1.6.6 0.000001474 57.0
SYD3_k127_759114_11 Peptidase, M28 - - - 0.0001619 49.0
SYD3_k127_759114_12 Kazal type serine protease inhibitors - - - 0.0007044 46.0
SYD3_k127_759114_2 Major Facilitator Superfamily K02575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 521.0
SYD3_k127_759114_3 TGS domain K06944 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006631 274.0
SYD3_k127_759114_4 Predicted membrane protein (DUF2157) - - - 0.000000000000000000000000000000000000000000000000000000000000000000003472 249.0
SYD3_k127_759114_5 nitrate reductase activity K00370,K00374,K02575 GO:0001666,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006950,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009628,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0036293,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0046906,GO:0048037,GO:0050896,GO:0055114,GO:0070469,GO:0070470,GO:0070482,GO:0071944,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901363,GO:1902494,GO:1990204 1.7.5.1 0.00000000000000000000000000000000000000000000005117 184.0
SYD3_k127_759114_6 Domain of unknown function (DUF4824) - - - 0.000000000000000000000000000000000006757 158.0
SYD3_k127_759114_7 Protein of unknown function (DUF2442) - - - 0.00000000000000005231 91.0
SYD3_k127_759114_8 Nitrate reductase delta subunit K00373 - - 0.000000000000004045 89.0
SYD3_k127_759114_9 Cytochrome C oxidase, cbb3-type, subunit III K02305 - - 0.0000000000002192 84.0
SYD3_k127_7800135_0 Aldehyde dehydrogenase family K00128 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007057 360.0
SYD3_k127_7800135_1 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008225 368.0
SYD3_k127_7800135_2 Glutamine amidotransferase class-I K01937 - 6.3.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000002957 251.0
SYD3_k127_7800135_3 Cation efflux family K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003655 249.0
SYD3_k127_7820448_0 PFAM response regulator receiver K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 611.0
SYD3_k127_7820448_1 Peptidase family M54 K06974 - - 0.000000000000000000000000000000000000000000003323 169.0
SYD3_k127_7820448_2 HAMP domain K02482 - 2.7.13.3 0.000000000000000000000001453 106.0
SYD3_k127_7841344_0 cysteine protease - - - 4.032e-241 760.0
SYD3_k127_7841344_1 oligopeptide transport K03305 - - 2.074e-202 644.0
SYD3_k127_7841344_10 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000002096 246.0
SYD3_k127_7841344_11 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000000001296 196.0
SYD3_k127_7841344_12 S-layer homology domain - - - 0.0000000000000000000000000000000000000000000003901 177.0
SYD3_k127_7841344_13 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000000000001421 185.0
SYD3_k127_7841344_14 of the cupin superfamily K06995 - - 0.0000000000000000000000000000000000000001732 151.0
SYD3_k127_7841344_15 - - - - 0.000000000000000000000000000000000000001678 159.0
SYD3_k127_7841344_16 Tyrosine phosphatase family - - - 0.00000000000000000000000000000000005965 141.0
SYD3_k127_7841344_17 DNA-templated transcription, initiation - - - 0.0000000000000000000000000000003765 132.0
SYD3_k127_7841344_19 hemerythrin HHE cation binding domain - - - 0.000000000000000003346 96.0
SYD3_k127_7841344_2 Glycosyl hydrolases family 43 K06113 - 3.2.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 604.0
SYD3_k127_7841344_20 Cupin 2, conserved barrel domain protein - - - 0.0000000000002627 79.0
SYD3_k127_7841344_22 PFAM Na-Ca exchanger integrin-beta4 - - - 0.000000000004547 78.0
SYD3_k127_7841344_23 Periplasmic copper-binding protein (NosD) - - - 0.000000005684 68.0
SYD3_k127_7841344_24 Antibiotic biosynthesis monooxygenase - - - 0.000000007252 65.0
SYD3_k127_7841344_25 Domain of unknown function (DUF4956) - - - 0.00000005654 66.0
SYD3_k127_7841344_3 PFAM Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008367 475.0
SYD3_k127_7841344_4 SMART Tetratricopeptide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 380.0
SYD3_k127_7841344_5 gluconolactonase K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007792 368.0
SYD3_k127_7841344_6 glutamine synthetase K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001112 296.0
SYD3_k127_7841344_7 arylsulfatase A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008787 308.0
SYD3_k127_7841344_8 arylsulfatase A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001128 300.0
SYD3_k127_7841344_9 Protein of unknown function (DUF418) K07148 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004767 269.0
SYD3_k127_7919075_0 Domain of unknown function (DUF1998) K06877 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 451.0
SYD3_k127_7942735_0 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 395.0
SYD3_k127_7942735_1 ResB-like family - - - 0.000000000000000000000000000000000000005442 157.0
SYD3_k127_7942735_2 amine dehydrogenase activity - - - 0.0000000000000000000000000000000494 144.0
SYD3_k127_8089830_0 HAMP domain K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 350.0
SYD3_k127_8133124_0 Amidohydrolase family - - - 4.69e-280 898.0
SYD3_k127_8133124_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 2.586e-255 804.0
SYD3_k127_8133124_10 - - - - 0.00000000000000000000000000000000000000000000422 173.0
SYD3_k127_8133124_11 Belongs to the P(II) protein family K04751 - - 0.00000000000000000000000000000000000000000002865 187.0
SYD3_k127_8133124_12 Bacterial PH domain K08981 - - 0.00000000000000000000000000000000000000000003162 175.0
SYD3_k127_8133124_13 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000002305 181.0
SYD3_k127_8133124_14 glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000004273 178.0
SYD3_k127_8133124_15 Cupin domain - - - 0.0000000000000000000000000000000000000001963 160.0
SYD3_k127_8133124_16 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000008239 138.0
SYD3_k127_8133124_17 Protein of unknown function (DUF2723) - - - 0.0000000000000000000000000000107 136.0
SYD3_k127_8133124_18 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.00000000000000000000000000007532 120.0
SYD3_k127_8133124_19 lipolytic protein G-D-S-L family K11751 - 3.1.3.5,3.6.1.45 0.0000000000000000000000001249 119.0
SYD3_k127_8133124_2 Flavin containing amine oxidoreductase - - - 7.011e-216 704.0
SYD3_k127_8133124_20 oligosaccharyl transferase activity - - - 0.00000000000000000000008057 114.0
SYD3_k127_8133124_21 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein - - - 0.0000000000000000006986 103.0
SYD3_k127_8133124_22 chaperone-mediated protein folding - - - 0.00000000000000005861 96.0
SYD3_k127_8133124_23 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000008379 91.0
SYD3_k127_8133124_24 Glycosyl transferase family 2 - - - 0.0000000000004266 70.0
SYD3_k127_8133124_25 Methyltransferase domain - - - 0.00000000001914 76.0
SYD3_k127_8133124_26 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000005393 73.0
SYD3_k127_8133124_27 Domain of unknown function (DUF4382) - - - 0.000000001545 69.0
SYD3_k127_8133124_28 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000007209 68.0
SYD3_k127_8133124_29 Methyltransferase domain - - - 0.0000000074 69.0
SYD3_k127_8133124_3 Ammonium Transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 576.0
SYD3_k127_8133124_30 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.000003192 61.0
SYD3_k127_8133124_4 Cys/Met metabolism PLP-dependent enzyme K01739 - 2.5.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004439 415.0
SYD3_k127_8133124_5 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 310.0
SYD3_k127_8133124_6 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 307.0
SYD3_k127_8133124_7 Male sterility protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 323.0
SYD3_k127_8133124_8 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000004206 238.0
SYD3_k127_8133124_9 Bacterial PH domain - - - 0.00000000000000000000000000000000000000000000000000000000001822 218.0
SYD3_k127_813856_0 ABC transporter K06147,K18890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 567.0
SYD3_k127_813856_1 PFAM ABC transporter transmembrane region K06147,K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 365.0
SYD3_k127_813856_10 Transport and Golgi organisation 2 - - - 0.0000000000000000000000002435 118.0
SYD3_k127_813856_11 GIY-YIG catalytic domain protein K02342 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0016020,GO:0030312,GO:0032991,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0071944,GO:1902494,GO:1905347,GO:1905348,GO:1990391 2.7.7.7 0.000000000000006584 89.0
SYD3_k127_813856_12 Protein of unknown function (DUF1573) - - - 0.0000000000002873 79.0
SYD3_k127_813856_14 - - - - 0.000000002039 71.0
SYD3_k127_813856_15 PFAM Aminoglycoside phosphotransferase - - - 0.000002238 51.0
SYD3_k127_813856_16 COG2010 Cytochrome c, mono- and diheme variants - - - 0.0001534 52.0
SYD3_k127_813856_2 - K12065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000676 359.0
SYD3_k127_813856_3 Transporter associated domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 360.0
SYD3_k127_813856_4 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000009777 253.0
SYD3_k127_813856_5 PFAM Silent information regulator protein Sir2 K12410 - - 0.00000000000000000000000000000000000000000000000000000000000002092 223.0
SYD3_k127_813856_6 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000003262 188.0
SYD3_k127_813856_7 Ferric uptake regulator family K03711 - - 0.000000000000000000000000000000000001612 144.0
SYD3_k127_813856_8 FMN_bind - - - 0.000000000000000000000000000002731 128.0
SYD3_k127_813856_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000004291 125.0
SYD3_k127_814949_0 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 608.0
SYD3_k127_814949_1 Enoyl-CoA hydratase/isomerase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 583.0
SYD3_k127_814949_10 FG-GAP repeat protein - - - 0.00000000000000000000000000115 130.0
SYD3_k127_814949_11 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000001727 119.0
SYD3_k127_814949_2 PFAM acyl-CoA dehydrogenase domain protein K00249,K11731 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 469.0
SYD3_k127_814949_3 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007566 456.0
SYD3_k127_814949_4 CoA-transferase family III K01796 - 5.1.99.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 334.0
SYD3_k127_814949_5 peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000006644 224.0
SYD3_k127_814949_6 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000000000000000000000001041 220.0
SYD3_k127_814949_7 COGs COG1748 Saccharopine dehydrogenase and related protein - - - 0.0000000000000000000000000000000000000000000001104 186.0
SYD3_k127_814949_8 Nitroreductase family - - - 0.000000000000000000000000000000000001052 146.0
SYD3_k127_814949_9 Membrane - - - 0.000000000000000000000000000003045 131.0
SYD3_k127_8193066_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009577 617.0
SYD3_k127_8193066_1 Cytochrome c-type biogenesis protein CcmF C-terminal K02198 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000082 535.0
SYD3_k127_8193066_10 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000001323 252.0
SYD3_k127_8193066_11 metal-dependent phosphohydrolase HD region - - - 0.000000000000000000000000000000000000000000000000000000000000000000003436 254.0
SYD3_k127_8193066_12 Stage II sporulation protein K06381 - - 0.00000000000000000000000000000000000000000000000000000000000000003071 250.0
SYD3_k127_8193066_13 PFAM Amidohydrolase 3 - - - 0.00000000000000000000000000000000000000000000000000000000001301 227.0
SYD3_k127_8193066_14 ABC transporter K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000008236 205.0
SYD3_k127_8193066_15 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000003144 194.0
SYD3_k127_8193066_16 Cytochrome C assembly protein K02195 GO:0001539,GO:0002048,GO:0002049,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006518,GO:0006629,GO:0006643,GO:0006664,GO:0006807,GO:0006810,GO:0006928,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009237,GO:0009247,GO:0009636,GO:0009987,GO:0015886,GO:0016020,GO:0016021,GO:0016209,GO:0016491,GO:0016684,GO:0019184,GO:0019290,GO:0019748,GO:0031224,GO:0031226,GO:0034641,GO:0040011,GO:0042221,GO:0043043,GO:0043107,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044425,GO:0044459,GO:0044464,GO:0044550,GO:0046467,GO:0048870,GO:0050896,GO:0051179,GO:0051181,GO:0051186,GO:0051188,GO:0051234,GO:0051674,GO:0051716,GO:0055114,GO:0070887,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0071973,GO:0071975,GO:0071977,GO:0071978,GO:0097237,GO:0097588,GO:0098754,GO:0098869,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901678,GO:1903509,GO:1990748 - 0.000000000000000000000000000000000000000000000000003427 200.0
SYD3_k127_8193066_17 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000002917 173.0
SYD3_k127_8193066_18 GTP cyclohydrolase I K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000001059 165.0
SYD3_k127_8193066_19 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 - 2.7.8.41 0.0000000000000000000000000000000008649 138.0
SYD3_k127_8193066_2 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001985 492.0
SYD3_k127_8193066_20 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000008769 151.0
SYD3_k127_8193066_21 PFAM 6-pyruvoyl tetrahydropterin K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000002609 136.0
SYD3_k127_8193066_22 CcmB protein K02194 - - 0.00000000000000000000000000000003992 144.0
SYD3_k127_8193066_23 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.00000000000000000000000000000004916 146.0
SYD3_k127_8193066_24 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000422 141.0
SYD3_k127_8193066_25 alpha beta - - - 0.00000000000000000000000000001069 136.0
SYD3_k127_8193066_26 heat shock protein binding K05516,K05801 - - 0.00000000000000000000000000006427 136.0
SYD3_k127_8193066_27 Serine aminopeptidase, S33 K06889 GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0009605,GO:0009607,GO:0030312,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044464,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052561,GO:0052562,GO:0052564,GO:0052572,GO:0071944,GO:0075136 - 0.0000000000000000000000000002768 128.0
SYD3_k127_8193066_28 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000003069 110.0
SYD3_k127_8193066_29 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000007529 113.0
SYD3_k127_8193066_3 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009448 488.0
SYD3_k127_8193066_30 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 GO:0003674,GO:0003824,GO:0004150,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016829,GO:0016830,GO:0016832,GO:0044424,GO:0044444,GO:0044464 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000000000000000141 108.0
SYD3_k127_8193066_31 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000001168 76.0
SYD3_k127_8193066_32 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000001688 79.0
SYD3_k127_8193066_33 YacP-like NYN domain K06962 - - 0.00000000002752 69.0
SYD3_k127_8193066_34 subunit of a heme lyase K02200 - - 0.000000149 59.0
SYD3_k127_8193066_35 - - - - 0.0005579 50.0
SYD3_k127_8193066_4 Threonine synthase K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008178 413.0
SYD3_k127_8193066_5 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 394.0
SYD3_k127_8193066_6 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 364.0
SYD3_k127_8193066_7 PFAM Type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004638 338.0
SYD3_k127_8193066_8 Asparaginase K01424 - 3.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000003711 264.0
SYD3_k127_8193066_9 UbiA prenyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001078 266.0
SYD3_k127_8199738_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1262.0
SYD3_k127_8199738_1 ABC transporter K15738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005596 417.0
SYD3_k127_8199738_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 332.0
SYD3_k127_8199738_3 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008059 270.0
SYD3_k127_8199738_4 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000000000001072 252.0
SYD3_k127_8199738_5 Sigma-70 region 2 K03088 - - 0.0000000000000000000000001064 111.0
SYD3_k127_8221820_0 Peptidase, family M49 - - - 3.843e-194 636.0
SYD3_k127_8221820_1 e3 binding domain K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 452.0
SYD3_k127_8221820_2 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 314.0
SYD3_k127_8221820_3 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008106 315.0
SYD3_k127_8221820_4 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.000000000000000000000000000000000000000000000000001211 209.0
SYD3_k127_8221820_5 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000000007331 117.0
SYD3_k127_8221820_6 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.000000006453 66.0
SYD3_k127_8227100_0 Pyruvate ferredoxin/flavodoxin oxidoreductase K00187 - 1.2.7.7 7.561e-214 695.0
SYD3_k127_8227100_1 Pyruvate:ferredoxin oxidoreductase core domain II K00186 - 1.2.7.7 1.293e-211 676.0
SYD3_k127_8227100_10 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001127 261.0
SYD3_k127_8227100_11 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001412 252.0
SYD3_k127_8227100_12 Serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000007341 249.0
SYD3_k127_8227100_13 Peptidyl-prolyl cis-trans isomerase K01802,K03772,K03773 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000008324 226.0
SYD3_k127_8227100_14 TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000004655 217.0
SYD3_k127_8227100_15 PFAM Glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.0000000000000000000000000000000000000000000000001232 192.0
SYD3_k127_8227100_16 GDSL-like Lipase/Acylhydrolase K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000001587 190.0
SYD3_k127_8227100_17 Pyruvate ferredoxin/flavodoxin oxidoreductase K00180 - 1.2.7.8 0.0000000000000000000000000000000000000000000000004158 201.0
SYD3_k127_8227100_18 ApaG domain K06195 - - 0.00000000000000000000000000000000000000000000004732 176.0
SYD3_k127_8227100_19 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000202 146.0
SYD3_k127_8227100_2 PFAM Aminotransferase class I and II K05825 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004329 521.0
SYD3_k127_8227100_20 TIGRFAM Transcriptional regulator, Rrf2 - - - 0.000000000000000000000000003337 118.0
SYD3_k127_8227100_21 PFAM plasmid K06218 - - 0.0000000000000000000000009532 105.0
SYD3_k127_8227100_23 helix_turn_helix, mercury resistance K22491 - - 0.000000000000000003679 86.0
SYD3_k127_8227100_25 - - - - 0.000000000001563 70.0
SYD3_k127_8227100_3 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 512.0
SYD3_k127_8227100_4 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009597 472.0
SYD3_k127_8227100_5 synthetase (ADP forming), alpha K01905,K09181,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009381 440.0
SYD3_k127_8227100_6 Cytochrome c3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004893 389.0
SYD3_k127_8227100_7 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 324.0
SYD3_k127_8227100_8 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000605 295.0
SYD3_k127_8227100_9 denitrification pathway - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002491 284.0
SYD3_k127_8229796_0 Hydrophobe Amphiphile Efflux-1 (HAE1) Family K03296,K18138 - - 0.0 1397.0
SYD3_k127_8229796_1 COG0659 Sulfate permease and related transporters (MFS superfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 482.0
SYD3_k127_8229796_10 response to antibiotic - - - 0.0000000000000001986 95.0
SYD3_k127_8229796_11 guanyl-nucleotide exchange factor activity K02034 - - 0.00000000002103 78.0
SYD3_k127_8229796_13 STAS domain K04749 - - 0.000002042 53.0
SYD3_k127_8229796_14 Thrombospondin type 3 repeat - - - 0.00000666 60.0
SYD3_k127_8229796_2 surface antigen variable number repeat protein K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005181 458.0
SYD3_k127_8229796_3 Biotin-lipoyl like K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002864 350.0
SYD3_k127_8229796_4 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 319.0
SYD3_k127_8229796_5 Two component transcriptional regulator, LuxR family - - - 0.00000000000000000000000000000000000000000000000000000001815 215.0
SYD3_k127_8229796_6 YMGG-like Gly-zipper - - - 0.00000000000000000000000000000006639 138.0
SYD3_k127_8229796_7 phosphorelay signal transduction system K14987 - - 0.00000000000000000000000001339 123.0
SYD3_k127_8229796_8 - - - - 0.00000000000000000000000007214 113.0
SYD3_k127_8229796_9 Calcium-binding EGF domain - - - 0.000000000000000003182 101.0
SYD3_k127_8265673_0 Domain of unknown function (DUF3372) K01200 - 3.2.1.41 0.0 1233.0
SYD3_k127_8265673_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006879 614.0
SYD3_k127_8265673_10 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003861 267.0
SYD3_k127_8265673_11 SelR domain K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000002053 233.0
SYD3_k127_8265673_12 Histidine kinase K13598 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000803 225.0
SYD3_k127_8265673_13 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000008473 205.0
SYD3_k127_8265673_14 Carboxymuconolactone decarboxylase - - - 0.0000000000000000000000000000000000000000000000000000000008509 209.0
SYD3_k127_8265673_15 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000000000000000000000000003735 191.0
SYD3_k127_8265673_16 Belongs to the P-Pant transferase superfamily K06133 - - 0.0000000000000000000000000000000000000000000009812 173.0
SYD3_k127_8265673_17 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000002548 178.0
SYD3_k127_8265673_18 Tellurite resistance protein TerB - - - 0.00000000000000000000000000000000000000006665 175.0
SYD3_k127_8265673_19 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000002266 175.0
SYD3_k127_8265673_2 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 559.0
SYD3_k127_8265673_20 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.00000000000000000000000000000000006478 139.0
SYD3_k127_8265673_21 - - - - 0.0000000000000000000000000189 111.0
SYD3_k127_8265673_22 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000007245 94.0
SYD3_k127_8265673_23 Tetratricopeptide repeats - - - 0.000001357 60.0
SYD3_k127_8265673_24 Phosphopantetheine attachment site - - - 0.0002309 48.0
SYD3_k127_8265673_25 Putative adhesin - - - 0.0009137 51.0
SYD3_k127_8265673_3 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 539.0
SYD3_k127_8265673_4 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 439.0
SYD3_k127_8265673_5 Mycolic acid cyclopropane synthetase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 395.0
SYD3_k127_8265673_6 homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 343.0
SYD3_k127_8265673_7 Cys/Met metabolism PLP-dependent enzyme K01760 - 4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006741 351.0
SYD3_k127_8265673_8 Belongs to the glycosyl hydrolase 13 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007315 329.0
SYD3_k127_8265673_9 Phosphopantetheine attachment site - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 301.0
SYD3_k127_8265694_0 Glycosyl transferase, family 2 K09931 - - 0.00004254 55.0
SYD3_k127_8276027_0 Transglycosylase SLT domain K08309 - - 0.000000000000000000000002145 111.0
SYD3_k127_8276027_1 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000009871 106.0
SYD3_k127_8276027_2 Type II secretion system (T2SS), protein G - - - 0.000002163 59.0
SYD3_k127_8276027_3 transposition, DNA-mediated K02342 - 2.7.7.7 0.0008134 46.0
SYD3_k127_8279654_0 DNA polymerase K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0 1138.0
SYD3_k127_8279654_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 638.0
SYD3_k127_8279654_10 Threonine aldolase K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 320.0
SYD3_k127_8279654_11 ArgK protein K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007676 314.0
SYD3_k127_8279654_12 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004213 319.0
SYD3_k127_8279654_13 Involved in the biosynthesis of porphyrin-containing compound - GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003185 275.0
SYD3_k127_8279654_14 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000003881 293.0
SYD3_k127_8279654_15 PFAM SNARE associated Golgi protein K03975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001314 259.0
SYD3_k127_8279654_16 von Willebrand factor (vWF) type A domain K07114,K12511 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003467 278.0
SYD3_k127_8279654_17 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000002058 224.0
SYD3_k127_8279654_18 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000000000000000000004125 192.0
SYD3_k127_8279654_19 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000004352 198.0
SYD3_k127_8279654_2 Ftsk_gamma K03466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 574.0
SYD3_k127_8279654_20 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000002914 200.0
SYD3_k127_8279654_21 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.00000000000000000000000000000000000000000000000003908 200.0
SYD3_k127_8279654_22 von Willebrand factor (vWF) type A domain K07114 - - 0.00000000000000000000000000000000000000000000006093 194.0
SYD3_k127_8279654_23 TIGRFAM diguanylate cyclase (GGDEF) domain - - - 0.00000000000000000000000000000000000000000002855 183.0
SYD3_k127_8279654_24 COG0346 Lactoylglutathione lyase and related lyases K05606 - 5.1.99.1 0.000000000000000000000000000000000000004854 164.0
SYD3_k127_8279654_25 Cache domain - - - 0.0000000000000000000000000000000000003936 156.0
SYD3_k127_8279654_26 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000000000000000000000000002584 134.0
SYD3_k127_8279654_27 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000237 141.0
SYD3_k127_8279654_28 Tetratricopeptide repeat - - - 0.000000000000000000006697 109.0
SYD3_k127_8279654_29 Lipopolysaccharide-assembly - - - 0.00000000000000000001004 104.0
SYD3_k127_8279654_3 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007365 509.0
SYD3_k127_8279654_30 Protein of unknown function, DUF255 K06888 - - 0.0000000000000000000141 107.0
SYD3_k127_8279654_31 - - - - 0.00000001343 66.0
SYD3_k127_8279654_32 Tetratricopeptide repeat K07114 - - 0.000001949 61.0
SYD3_k127_8279654_33 peptidyl-tyrosine sulfation - - - 0.00000651 59.0
SYD3_k127_8279654_34 DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.00003071 57.0
SYD3_k127_8279654_35 Two component signalling adaptor domain K03408 - - 0.000778 46.0
SYD3_k127_8279654_4 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008069 508.0
SYD3_k127_8279654_5 Radical SAM superfamily K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 437.0
SYD3_k127_8279654_6 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004951 426.0
SYD3_k127_8279654_7 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 380.0
SYD3_k127_8279654_8 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004731,GO:0006082,GO:0006139,GO:0006144,GO:0006168,GO:0006520,GO:0006555,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009112,GO:0009113,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0017061,GO:0017144,GO:0018130,GO:0019438,GO:0019509,GO:0019752,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0055086,GO:0071265,GO:0071267,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 376.0
SYD3_k127_8279654_9 pfkB family carbohydrate kinase K00852,K00856 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004001,GO:0005488,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005975,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019200,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032552,GO:0032553,GO:0032554,GO:0032555,GO:0032559,GO:0032560,GO:0032561,GO:0032567,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046390,GO:0046483,GO:0046835,GO:0046872,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.15,2.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 337.0
SYD3_k127_8298164_0 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005313 407.0
SYD3_k127_8298164_1 PIN domain K07064 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040008,GO:0044464,GO:0045926,GO:0048519,GO:0050789,GO:0065007,GO:0071944 - 0.0000002316 60.0
SYD3_k127_8298164_2 TonB C terminal K03832 - - 0.000003394 49.0
SYD3_k127_8298164_3 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000051 49.0
SYD3_k127_8325127_0 Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 526.0
SYD3_k127_8325127_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 329.0
SYD3_k127_8325127_2 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.00000000000000000000000000000000000000000000000007574 202.0
SYD3_k127_8325127_3 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000002248 183.0
SYD3_k127_8325127_4 lipolytic protein G-D-S-L family K05970 - 3.1.1.53 0.000000000000000000000000000000001848 149.0
SYD3_k127_8325127_5 Outer membrane receptor K02014,K16087 - - 0.0000000000000000000000000000002864 144.0
SYD3_k127_8325127_6 HYR domain - - - 0.000000000000000000000006137 119.0
SYD3_k127_8325127_7 Outer membrane receptor proteins mostly Fe transport K02014 - - 0.000000000000000001118 101.0
SYD3_k127_8344390_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006588 602.0
SYD3_k127_8344390_1 CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000000009867 121.0
SYD3_k127_8352810_0 Dehydrogenase E1 component K00164 - 1.2.4.2 9.727e-268 843.0
SYD3_k127_8352810_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008596 401.0
SYD3_k127_8405255_0 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005129 415.0
SYD3_k127_8405255_1 Low molecular weight phosphatase family K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000000002315 199.0
SYD3_k127_8408644_0 Dienelactone hydrolase family - - - 0.0 1118.0
SYD3_k127_8408644_1 GDP-mannose 4,6-dehydratase activity K01711,K15856 - 1.1.1.281,4.2.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008152 325.0
SYD3_k127_8408644_2 GHMP kinase K07031 - 2.7.1.168 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004658 324.0
SYD3_k127_8408644_3 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377,K16554 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000007461 232.0
SYD3_k127_8408644_4 hydrolase, HAD-superfamily, subfamily IIIA K03273 - 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000000000000000000576 188.0
SYD3_k127_8408644_5 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000001753 189.0
SYD3_k127_8408644_6 Nucleotidyl transferase K15669 - 2.7.7.71 0.0000000000000000000000000000000000000000009522 168.0
SYD3_k127_8408644_7 cellulose binding K01179,K01216,K21449 - 3.2.1.4,3.2.1.73 0.00000008876 66.0
SYD3_k127_8418501_0 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004617 560.0
SYD3_k127_8418501_1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008052 376.0
SYD3_k127_8418501_10 Uncharacterized conserved protein (DUF2183) - - - 0.000000000000000000000000000000000000000000000000000004959 203.0
SYD3_k127_8418501_11 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000000000001471 205.0
SYD3_k127_8418501_12 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000005574 154.0
SYD3_k127_8418501_13 - - - - 0.0000000000000000000000000000000197 141.0
SYD3_k127_8418501_14 transcriptional regulator - - - 0.0000000000000000000000000000007005 134.0
SYD3_k127_8418501_15 - - - - 0.0000000000000000000000000005206 133.0
SYD3_k127_8418501_16 Putative metal-binding motif - - - 0.0000000000000000000000000527 125.0
SYD3_k127_8418501_17 - - - - 0.0000000000000000000000007316 115.0
SYD3_k127_8418501_18 DNA-binding transcription factor activity - - - 0.0000000000000000000001434 114.0
SYD3_k127_8418501_19 Transglutaminase-like superfamily - - - 0.000000000000000000004386 99.0
SYD3_k127_8418501_2 Histidine-specific methyltransferase, SAM-dependent K18911 - 2.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 331.0
SYD3_k127_8418501_20 Glycosyl hydrolases family 39 K01198 - 3.2.1.37 0.0000000000000085 90.0
SYD3_k127_8418501_21 Fatty acid desaturase - - - 0.0000000000001176 83.0
SYD3_k127_8418501_22 PFAM polysaccharide biosynthesis protein - - - 0.00000000009765 74.0
SYD3_k127_8418501_23 Fatty acid desaturase - - - 0.0000000002453 71.0
SYD3_k127_8418501_24 WD40-like Beta Propeller Repeat - - - 0.0000000003109 74.0
SYD3_k127_8418501_25 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000009113 64.0
SYD3_k127_8418501_26 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.000047 50.0
SYD3_k127_8418501_27 heparin binding K04659,K16857 GO:0001501,GO:0001968,GO:0002020,GO:0003416,GO:0003417,GO:0003674,GO:0005198,GO:0005201,GO:0005488,GO:0005496,GO:0005499,GO:0005509,GO:0005515,GO:0005518,GO:0005539,GO:0005575,GO:0005576,GO:0005912,GO:0005924,GO:0005927,GO:0007155,GO:0007275,GO:0007517,GO:0008150,GO:0008201,GO:0008289,GO:0009653,GO:0009887,GO:0009888,GO:0009987,GO:0010941,GO:0016043,GO:0016203,GO:0019842,GO:0019899,GO:0022610,GO:0030054,GO:0030055,GO:0030198,GO:0031012,GO:0032501,GO:0032502,GO:0032991,GO:0033627,GO:0035265,GO:0036094,GO:0040007,GO:0042981,GO:0043062,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043169,GO:0043394,GO:0043395,GO:0044421,GO:0044877,GO:0046872,GO:0048513,GO:0048519,GO:0048523,GO:0048589,GO:0048705,GO:0048731,GO:0048736,GO:0048856,GO:0050789,GO:0050794,GO:0051216,GO:0060173,GO:0060348,GO:0060349,GO:0060350,GO:0060351,GO:0060538,GO:0060548,GO:0061061,GO:0061448,GO:0062023,GO:0065007,GO:0070161,GO:0071840,GO:0097159,GO:0097367,GO:0098868,GO:1901681 - 0.00004768 57.0
SYD3_k127_8418501_28 cell adhesion K05889,K17713 - 1.1.2.6 0.0004809 54.0
SYD3_k127_8418501_3 ATPases associated with a variety of cellular activities K05847 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003396 276.0
SYD3_k127_8418501_4 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001131 280.0
SYD3_k127_8418501_5 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00383 - 1.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000004727 249.0
SYD3_k127_8418501_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000204 240.0
SYD3_k127_8418501_7 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.00000000000000000000000000000000000000000000000000000000000009128 239.0
SYD3_k127_8418501_8 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000000000000000000000000000000000000000000000002318 228.0
SYD3_k127_8418501_9 PFAM Na-Ca exchanger integrin-beta4 peptidase-like FG-GAP K20276 - - 0.00000000000000000000000000000000000000000000000000000244 214.0
SYD3_k127_8457223_0 (ABC) transporter K15738 - - 4.075e-195 624.0
SYD3_k127_8457223_1 Putative restriction endonuclease - - - 0.000000000000000000000000000000000000000009122 158.0
SYD3_k127_8468875_0 AcrB/AcrD/AcrF family K15726 - - 0.0 1406.0
SYD3_k127_8468875_1 Bacterial protein of unknown function (DUF899) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000359 431.0
SYD3_k127_8468875_2 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005891 364.0
SYD3_k127_8468875_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 364.0
SYD3_k127_8468875_5 - - - - 0.0002279 49.0
SYD3_k127_8516394_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1101.0
SYD3_k127_8516394_1 GTP-binding protein TypA K06207 - - 8.205e-259 812.0
SYD3_k127_8516394_10 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009296 510.0
SYD3_k127_8516394_11 PFAM NAD-dependent epimerase dehydratase K01710,K08678 - 4.1.1.35,4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 488.0
SYD3_k127_8516394_12 Endoribonuclease that initiates mRNA decay K18682 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009437 447.0
SYD3_k127_8516394_13 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 435.0
SYD3_k127_8516394_14 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 450.0
SYD3_k127_8516394_15 Catalyzes the phosphorylation of D-glycero-D-manno- heptose 7-phosphate at the C-1 position to selectively form D- glycero-beta-D-manno-heptose-1,7-bisphosphate K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 426.0
SYD3_k127_8516394_16 Protein of unknown function (DUF1343) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 411.0
SYD3_k127_8516394_17 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791,K13019 - 5.1.3.14,5.1.3.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004302 415.0
SYD3_k127_8516394_18 PFAM Acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 404.0
SYD3_k127_8516394_19 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009445 407.0
SYD3_k127_8516394_2 Elongation factor G, domain IV K02355 - - 3.912e-235 747.0
SYD3_k127_8516394_20 Thiolase, N-terminal domain K00626 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 386.0
SYD3_k127_8516394_21 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 396.0
SYD3_k127_8516394_22 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002755 379.0
SYD3_k127_8516394_23 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 372.0
SYD3_k127_8516394_24 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004287 374.0
SYD3_k127_8516394_25 RmlD substrate binding domain K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 354.0
SYD3_k127_8516394_26 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 367.0
SYD3_k127_8516394_27 PFAM NAD-dependent epimerase dehydratase K01784,K02473 - 5.1.3.2,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 363.0
SYD3_k127_8516394_28 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004897 348.0
SYD3_k127_8516394_29 Methyltransferase FkbM domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005589 336.0
SYD3_k127_8516394_3 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.083e-214 677.0
SYD3_k127_8516394_30 SPFH domain-Band 7 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007873 335.0
SYD3_k127_8516394_31 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family K13687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 334.0
SYD3_k127_8516394_32 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 318.0
SYD3_k127_8516394_33 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 322.0
SYD3_k127_8516394_34 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 319.0
SYD3_k127_8516394_35 Protein of unknown function (DUF2400) K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000002679 268.0
SYD3_k127_8516394_36 CobQ CobB MinD ParA nucleotide binding domain K16554,K16692 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009232 278.0
SYD3_k127_8516394_37 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003749 257.0
SYD3_k127_8516394_38 Peptidase C26 K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000004284 256.0
SYD3_k127_8516394_39 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000004842 242.0
SYD3_k127_8516394_4 Asparaginyl-tRNA synthetase K01893 GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004501 554.0
SYD3_k127_8516394_40 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000003365 246.0
SYD3_k127_8516394_41 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000001032 246.0
SYD3_k127_8516394_42 Squalene/phytoene synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000005472 237.0
SYD3_k127_8516394_43 Serine acetyltransferase K00640 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009001,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016407,GO:0016412,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000008654 237.0
SYD3_k127_8516394_44 Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000001093 231.0
SYD3_k127_8516394_45 Mannose-6-phosphate isomerase K00971 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000005273 235.0
SYD3_k127_8516394_46 extracellular solute-binding protein, family 5 K02035,K13893 - - 0.00000000000000000000000000000000000000000000000000000000004706 227.0
SYD3_k127_8516394_47 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000001637 225.0
SYD3_k127_8516394_48 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000002601 226.0
SYD3_k127_8516394_49 beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000002869 209.0
SYD3_k127_8516394_5 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 560.0
SYD3_k127_8516394_50 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000003549 223.0
SYD3_k127_8516394_51 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.00000000000000000000000000000000000000000000000000000002194 209.0
SYD3_k127_8516394_52 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000001141 222.0
SYD3_k127_8516394_53 Domain of unknown function (DUF1732) - - - 0.0000000000000000000000000000000000000000000000000000001746 206.0
SYD3_k127_8516394_54 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.0000000000000000000000000000000000000000000000000000002069 204.0
SYD3_k127_8516394_55 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000001055 212.0
SYD3_k127_8516394_56 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000000002157 200.0
SYD3_k127_8516394_57 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.000000000000000000000000000000000000000000000000000005567 219.0
SYD3_k127_8516394_58 DHH family K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000008136 209.0
SYD3_k127_8516394_59 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.000000000000000000000000000000000000000000000000000009933 200.0
SYD3_k127_8516394_6 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 555.0
SYD3_k127_8516394_60 TIGRFAM squalene-associated FAD-dependent desaturase - - - 0.00000000000000000000000000000000000000000000000000002823 211.0
SYD3_k127_8516394_61 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.00000000000000000000000000000000000000000000000000005214 203.0
SYD3_k127_8516394_62 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000005285 210.0
SYD3_k127_8516394_63 protein conserved in bacteria K09778 - - 0.00000000000000000000000000000000000000000000000000005668 195.0
SYD3_k127_8516394_64 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000006569 190.0
SYD3_k127_8516394_65 Bacterial transferase hexapeptide (six repeats) K02617 GO:0003674,GO:0003824,GO:0004089,GO:0005488,GO:0008270,GO:0016829,GO:0016835,GO:0016836,GO:0043167,GO:0043168,GO:0043169,GO:0043199,GO:0046872,GO:0046914,GO:0050897,GO:0071890,GO:1901681 - 0.00000000000000000000000000000000000000000000001648 177.0
SYD3_k127_8516394_66 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000008245 178.0
SYD3_k127_8516394_67 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000000000002543 162.0
SYD3_k127_8516394_68 DNA polymerase III K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000666 172.0
SYD3_k127_8516394_69 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit K01768,K07315 - 3.1.3.3,4.6.1.1 0.000000000000000000000000000000000000001392 164.0
SYD3_k127_8516394_7 UDP binding domain K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 541.0
SYD3_k127_8516394_70 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000001404 156.0
SYD3_k127_8516394_71 Calcineurin-like phosphoesterase K03269 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0019897,GO:0019898,GO:0030145,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.54 0.00000000000000000000000000000000000005234 162.0
SYD3_k127_8516394_72 MoaE protein K21142 - 2.8.1.12 0.00000000000000000000000000000000000005979 147.0
SYD3_k127_8516394_73 NYN domain - - - 0.0000000000000000000000000000000000002373 159.0
SYD3_k127_8516394_74 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.0000000000000000000000000000000000003003 153.0
SYD3_k127_8516394_75 Heat shock protein DnaJ domain protein - - - 0.0000000000000000000000000000000000006987 157.0
SYD3_k127_8516394_76 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 - 1.1.1.25,4.2.1.10 0.00000000000000000000000000000000005558 156.0
SYD3_k127_8516394_77 Exonuclease - - - 0.0000000000000000000000000000000001052 147.0
SYD3_k127_8516394_78 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000000001496 136.0
SYD3_k127_8516394_79 Hydrolase, P-loop family K06925 - - 0.000000000000000000000000004729 128.0
SYD3_k127_8516394_8 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 512.0
SYD3_k127_8516394_80 metal cluster binding K06940 - - 0.000000000000000000000000005962 121.0
SYD3_k127_8516394_81 O-Antigen ligase K02847 - - 0.000000000000000000001051 112.0
SYD3_k127_8516394_82 - - - - 0.000000000000000001589 94.0
SYD3_k127_8516394_83 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.00000000000000003694 94.0
SYD3_k127_8516394_84 - - - - 0.000000000000008959 89.0
SYD3_k127_8516394_85 - - - - 0.000000000000282 76.0
SYD3_k127_8516394_86 polysaccharide export K01991 - - 0.000000000001499 81.0
SYD3_k127_8516394_87 Uncharacterised nucleotidyltransferase - - - 0.000000000004619 79.0
SYD3_k127_8516394_88 peptidase M48, Ste24p - - - 0.00000000001101 78.0
SYD3_k127_8516394_89 - - - - 0.000000001508 65.0
SYD3_k127_8516394_9 PFAM acyl-CoA dehydrogenase domain protein K00252 - 1.3.8.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004511 502.0
SYD3_k127_8516394_90 sequence-specific DNA binding - - - 0.0000007405 59.0
SYD3_k127_8516394_91 - - - - 0.000001212 62.0
SYD3_k127_8516394_92 DNA-directed 5'-3' RNA polymerase activity K03060 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030312,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0071944,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.000006058 51.0
SYD3_k127_8516394_93 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03635,K21142 - 2.8.1.12 0.000006591 58.0
SYD3_k127_8516394_95 PFAM glycoside hydrolase family 39 K21000 - - 0.0009819 53.0
SYD3_k127_8539597_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 6.56e-316 990.0
SYD3_k127_8539597_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004214 422.0
SYD3_k127_8539597_10 Bacterial regulatory proteins, tetR family - - - 0.00000000149 66.0
SYD3_k127_8539597_2 Tryptophan 2,3-dioxygenase K00453 - 1.13.11.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004885 357.0
SYD3_k127_8539597_3 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004537 304.0
SYD3_k127_8539597_4 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000001238 216.0
SYD3_k127_8539597_5 Putative cyclase K07130 - 3.5.1.9 0.0000000000000000000000000000000000000000000000003041 183.0
SYD3_k127_8539597_6 FAD binding domain K00486 - 1.14.13.9 0.0000000000000000000000000000000000000000001446 163.0
SYD3_k127_8539597_7 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000006334 154.0
SYD3_k127_8539597_8 TIGRFAM The (Largely Gram-negative Bacterial) Hydrophobe Amphiphile Efflux-1 (HAE1) Family K03296,K18138 - - 0.000000000000000001135 99.0
SYD3_k127_8539597_9 PFAM ABC-2 type transporter K01992 - - 0.0000000000000002907 93.0
SYD3_k127_8557628_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 2.187e-207 662.0
SYD3_k127_8557628_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003636 609.0
SYD3_k127_8557628_10 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000001258 235.0
SYD3_k127_8557628_11 chromosome segregation K03497 - - 0.00000000000000000000000000000000000000000000000000000001343 209.0
SYD3_k127_8557628_12 PFAM Histidine triad (HIT) protein K19710 - 2.7.7.53 0.00000000000000000000000000000000000000000000000002154 184.0
SYD3_k127_8557628_13 Bifunctional nuclease K08999 - - 0.00000000000000000000000000000000000000000000000002527 189.0
SYD3_k127_8557628_14 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000002302 183.0
SYD3_k127_8557628_15 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000000000000003608 181.0
SYD3_k127_8557628_16 histone H2A K63-linked ubiquitination K10914 - - 0.0000000000000000000000000000000000000000004563 167.0
SYD3_k127_8557628_17 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000001668 152.0
SYD3_k127_8557628_18 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.00000000000000000000000000000000005762 136.0
SYD3_k127_8557628_19 bacterial (prokaryotic) histone like domain K03530 - - 0.00000000000000000000000000001498 121.0
SYD3_k127_8557628_2 tRNA synthetases class I (W and Y) K01867 GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005227 424.0
SYD3_k127_8557628_20 PFAM PEGA domain - - - 0.000001595 60.0
SYD3_k127_8557628_21 Virulence factor BrkB K07058 - - 0.000014 59.0
SYD3_k127_8557628_3 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004019 386.0
SYD3_k127_8557628_4 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 383.0
SYD3_k127_8557628_5 Cobyrinic acid ac-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007507 277.0
SYD3_k127_8557628_6 Permease, YjgP YjgQ - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008775 298.0
SYD3_k127_8557628_7 GTP binding K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008169 277.0
SYD3_k127_8557628_8 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000003276 264.0
SYD3_k127_8557628_9 Competence protein ComEC K02238 - - 0.000000000000000000000000000000000000000000000000000000000000334 238.0
SYD3_k127_8642558_0 PFAM peptidase M13 K01415 - 3.4.24.71 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006166 616.0
SYD3_k127_8642558_1 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 546.0
SYD3_k127_8642558_10 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003588 277.0
SYD3_k127_8642558_11 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002986 275.0
SYD3_k127_8642558_12 Belongs to the radical SAM superfamily. RlmN family K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000005655 256.0
SYD3_k127_8642558_13 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000001313 210.0
SYD3_k127_8642558_14 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000559 194.0
SYD3_k127_8642558_15 DoxX K15977 - - 0.000000000000000000000000000000000000000004641 164.0
SYD3_k127_8642558_16 helix_turn_helix multiple antibiotic resistance protein K15973 - - 0.000000000000000000000000000000000003313 150.0
SYD3_k127_8642558_17 - - - - 0.00000000000000000000000000000000009945 144.0
SYD3_k127_8642558_18 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000000000002904 139.0
SYD3_k127_8642558_19 40-residue YVTN family beta-propeller repeat - - - 0.000000000000000000000000009126 118.0
SYD3_k127_8642558_2 O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 545.0
SYD3_k127_8642558_20 chain release factor K15034 - - 0.00000000000000000000000005424 126.0
SYD3_k127_8642558_21 Methyltransferase domain - - - 0.000000000000001841 91.0
SYD3_k127_8642558_22 RDD family - - - 0.00000000000001319 81.0
SYD3_k127_8642558_23 MatE - - - 0.000000000000564 82.0
SYD3_k127_8642558_3 oligopeptide transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 506.0
SYD3_k127_8642558_4 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 522.0
SYD3_k127_8642558_5 Nitronate monooxygenase K00459,K02371 - 1.13.12.16,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003435 447.0
SYD3_k127_8642558_6 HI0933-like protein K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 432.0
SYD3_k127_8642558_7 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K00363,K05710,K17247 - 1.7.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 374.0
SYD3_k127_8642558_8 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 360.0
SYD3_k127_8642558_9 dienelactone hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008087 334.0
SYD3_k127_8661860_0 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006814 477.0
SYD3_k127_8661860_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 424.0
SYD3_k127_8661860_10 Regulates arginine biosynthesis genes K03402 - - 0.000000000000000000223 103.0
SYD3_k127_8661860_11 ATPase-coupled phosphate ion transmembrane transporter activity - - - 0.00000000001684 74.0
SYD3_k127_8661860_2 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 344.0
SYD3_k127_8661860_3 Belongs to the ATCase OTCase family K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0043857,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 330.0
SYD3_k127_8661860_4 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005077 334.0
SYD3_k127_8661860_5 Glutamate--cysteine ligase K01919 - 6.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000001051 269.0
SYD3_k127_8661860_6 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000003904 271.0
SYD3_k127_8661860_7 Peptidase dimerisation domain K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000001254 258.0
SYD3_k127_8661860_8 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000009543 205.0
SYD3_k127_8661860_9 SMART Metal-dependent phosphohydrolase, HD region K07141 - 2.7.7.76 0.000000000000000000000001675 121.0
SYD3_k127_8743156_0 Polysaccharide biosynthesis protein K15891 - 1.1.1.354 0.00000000000000000000000000000000000000000000000000000000000000000164 253.0
SYD3_k127_8743156_1 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000004658 172.0
SYD3_k127_8743156_2 PFAM Integral membrane protein DUF92 - GO:0005575,GO:0016020 - 0.000000000000000000000000000000000000009324 162.0
SYD3_k127_8743156_4 PFAM Organic solvent tolerance protein K04744 - - 0.00002617 55.0
SYD3_k127_8772700_0 PFAM Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000000001503 201.0
SYD3_k127_8772700_1 Crp Fnr family transcriptional regulator K21564 - - 0.0000151 51.0
SYD3_k127_8844288_0 FecR protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 488.0
SYD3_k127_8844288_1 SMART protein phosphatase 2C domain protein K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 390.0
SYD3_k127_8844288_2 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 356.0
SYD3_k127_8844288_3 SMART Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005682 368.0
SYD3_k127_8844288_4 PFAM beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000004458 239.0
SYD3_k127_8844288_5 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000002009 240.0
SYD3_k127_8844288_6 negative regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment - - - 0.00000000000000000000000000000000000000000000000006132 205.0
SYD3_k127_8844288_7 Sortase family K07284 - 3.4.22.70 0.0000000000000000000000000000001312 134.0
SYD3_k127_9019385_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1155.0
SYD3_k127_9019385_1 AAA-like domain - - - 2.818e-258 844.0
SYD3_k127_9019385_10 Belongs to the selenophosphate synthase 1 family. Class I subfamily K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000002222 220.0
SYD3_k127_9019385_11 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000001403 199.0
SYD3_k127_9019385_12 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000003215 173.0
SYD3_k127_9019385_13 - - - - 0.0000000000000000000000000000003786 139.0
SYD3_k127_9019385_14 - - - - 0.00000000000000000000006913 115.0
SYD3_k127_9019385_2 PFAM peptidase S9A prolyl oligopeptidase domain protein beta-propeller K01354 - 3.4.21.83 5.531e-244 771.0
SYD3_k127_9019385_3 Sodium:neurotransmitter symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 592.0
SYD3_k127_9019385_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 374.0
SYD3_k127_9019385_5 PFAM Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000385 382.0
SYD3_k127_9019385_6 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 353.0
SYD3_k127_9019385_7 AAA domain (Cdc48 subfamily) K03544 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006667 283.0
SYD3_k127_9019385_8 Haemolysin-III related K11068 - - 0.000000000000000000000000000000000000000000000000000000000000000004572 231.0
SYD3_k127_9019385_9 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K01142,K10773 GO:0000702,GO:0000703,GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006289,GO:0006296,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0033683,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 3.1.11.2,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000427 237.0
SYD3_k127_9039553_0 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 438.0
SYD3_k127_9039553_1 phosphinothricin N-acetyltransferase activity K03823 - 2.3.1.183 0.000000000000000000000000000000000000000000000000000001315 200.0
SYD3_k127_9039553_2 Alkylmercury lyase - - - 0.00000000000000000000004909 104.0
SYD3_k127_9039553_3 acetyltransferase - - - 0.000000000000000000006889 93.0
SYD3_k127_9039553_5 Alkylmercury lyase - - - 0.0000004544 54.0
SYD3_k127_9095679_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0030312,GO:0044464,GO:0050896,GO:0055114,GO:0071944 1.2.7.11,1.2.7.3 6.03e-241 760.0
SYD3_k127_9095679_1 Acyclic terpene utilisation family protein AtuA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 578.0
SYD3_k127_9095679_10 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0031224,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.00000000000000000000000000000004117 145.0
SYD3_k127_9095679_11 - - - - 0.00000000000000000000000002611 128.0
SYD3_k127_9095679_12 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.0000000000000000000001228 108.0
SYD3_k127_9095679_2 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009947 464.0
SYD3_k127_9095679_3 Ribonuclease E/G family K08300,K08301 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005334 445.0
SYD3_k127_9095679_4 Penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 359.0
SYD3_k127_9095679_5 Family of unknown function (DUF1028) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 340.0
SYD3_k127_9095679_6 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 356.0
SYD3_k127_9095679_7 Family 5 K02035,K15580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002499 262.0
SYD3_k127_9095679_8 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000001894 226.0
SYD3_k127_9095679_9 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000001792 207.0
SYD3_k127_9157519_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003728 385.0
SYD3_k127_9157519_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000354 281.0
SYD3_k127_9157519_2 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000591 283.0
SYD3_k127_9157519_3 EVE domain-containing protein - - - 0.00000000000000000000000000000002954 128.0
SYD3_k127_9157519_4 sigma factor antagonist activity K04757,K17752 - 2.7.11.1 0.0000000000000000000006381 103.0
SYD3_k127_9157519_5 domain, Protein K15125,K21449 - - 0.00000000000000002655 93.0
SYD3_k127_9157519_6 PFAM Fibronectin, type III domain K01179,K06882 - 3.2.1.4 0.0000001363 63.0
SYD3_k127_9229036_0 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 - 2.7.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 577.0
SYD3_k127_9229036_1 NADH-quinone oxidoreductase chain L K00341,K05577 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006259 529.0
SYD3_k127_9229036_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000002139 93.0
SYD3_k127_9229036_11 Belongs to the complex I subunit 6 family K00339,K05578 - 1.6.5.3 0.00000000000000003269 94.0
SYD3_k127_9229036_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000452 79.0
SYD3_k127_9229036_2 Proton-conducting membrane transporter K00342,K05575 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 532.0
SYD3_k127_9229036_3 NAD binding K00333,K05579,K13378 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008218 403.0
SYD3_k127_9229036_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337,K05572 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0044237,GO:0045333,GO:0050136,GO:0055114 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003305 330.0
SYD3_k127_9229036_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343,K05573 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007242 330.0
SYD3_k127_9229036_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 290.0
SYD3_k127_9229036_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000007585 226.0
SYD3_k127_9229036_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00332 - 1.6.5.3 0.0000000000000000000000003579 111.0
SYD3_k127_9229036_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K03941 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3,1.6.99.3 0.0000000000000000000002118 112.0
SYD3_k127_9308132_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 527.0
SYD3_k127_9308132_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 346.0
SYD3_k127_9308132_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate - - - 0.000000000000000000000000000000000000000000000000006649 193.0
SYD3_k127_9308132_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000001208 166.0
SYD3_k127_9308132_4 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.0000000000000009455 85.0
SYD3_k127_9308132_5 Phage integrase family - - - 0.00000122 57.0
SYD3_k127_9308985_0 cellulose binding - - - 3.282e-222 692.0
SYD3_k127_9308985_1 BNR Asp-box repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 523.0
SYD3_k127_9308985_10 PFAM ABC transporter related K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005692 345.0
SYD3_k127_9308985_11 COG3209 Rhs family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 342.0
SYD3_k127_9308985_12 Sodium/hydrogen exchanger family K03316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003192 303.0
SYD3_k127_9308985_13 Acyl-CoA dehydrogenase, middle domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002016 289.0
SYD3_k127_9308985_14 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000007191 219.0
SYD3_k127_9308985_15 - - - - 0.00000000000000000000000000000000000000000003932 172.0
SYD3_k127_9308985_16 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.0000000000000000000000000000004898 142.0
SYD3_k127_9308985_17 oligosaccharyl transferase activity - - - 0.000000000000000001737 100.0
SYD3_k127_9308985_18 Pyridine nucleotide-disulphide oxidoreductase K05297 - 1.18.1.1 0.00000000000000005152 96.0
SYD3_k127_9308985_19 Lysin motif - - - 0.000000000000001156 88.0
SYD3_k127_9308985_2 Mo-molybdopterin cofactor metabolic process K03148,K03636,K21029,K21147 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006732,GO:0006777,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009108,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0016782,GO:0018130,GO:0019344,GO:0019538,GO:0019637,GO:0019720,GO:0019752,GO:0020012,GO:0030312,GO:0030682,GO:0042783,GO:0043170,GO:0043207,GO:0043436,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051189,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051810,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0061605,GO:0070566,GO:0071704,GO:0071944,GO:0075136,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.73,2.7.7.80,2.8.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007622 483.0
SYD3_k127_9308985_21 Protein of unknown function (DUF2662) - GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944,GO:0097159,GO:1901363 - 0.000000001371 68.0
SYD3_k127_9308985_3 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 447.0
SYD3_k127_9308985_4 Ankyrin repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 446.0
SYD3_k127_9308985_5 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 460.0
SYD3_k127_9308985_6 SMART Tetratricopeptide - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006752 413.0
SYD3_k127_9308985_7 radical SAM domain protein K04070 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 400.0
SYD3_k127_9308985_8 COG3209 Rhs family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004617 394.0
SYD3_k127_9308985_9 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 370.0
SYD3_k127_9516820_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 329.0
SYD3_k127_9537159_0 transporter, DctM subunit K11690 - - 1.789e-228 731.0
SYD3_k127_9537159_1 TRAP transporter T-component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007558 359.0
SYD3_k127_9537159_2 PFAM TRAP dicarboxylate transporter- DctP subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 358.0
SYD3_k127_9537159_3 Domain of unknown function (DU1801) - - - 0.0000000000000184 76.0
SYD3_k127_9612147_0 synthetase (ADP forming), alpha K01905,K09181,K22224 - 6.2.1.13 8.132e-199 655.0
SYD3_k127_9612147_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 2.024e-196 646.0
SYD3_k127_9612147_10 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000001941 252.0
SYD3_k127_9612147_11 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000001469 247.0
SYD3_k127_9612147_12 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000008087 210.0
SYD3_k127_9612147_13 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000001243 209.0
SYD3_k127_9612147_14 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000003266 194.0
SYD3_k127_9612147_15 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000006644 203.0
SYD3_k127_9612147_16 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000008778 183.0
SYD3_k127_9612147_17 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000000000000000000000000000119 185.0
SYD3_k127_9612147_18 FecR protein - - - 0.00000000000000000000000000000000000000000007177 183.0
SYD3_k127_9612147_19 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000001007 181.0
SYD3_k127_9612147_2 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007311 556.0
SYD3_k127_9612147_20 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.0000000000000000000000000000000000000001205 160.0
SYD3_k127_9612147_21 Membrane - - - 0.0000000000000000000000000000000000625 140.0
SYD3_k127_9612147_22 Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000000009948 142.0
SYD3_k127_9612147_23 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000001732 123.0
SYD3_k127_9612147_24 Fibronectin type III domain protein - - - 0.0000000000000000000000000001298 130.0
SYD3_k127_9612147_25 PASTA K12132 - 2.7.11.1 0.000000000000000000003418 106.0
SYD3_k127_9612147_26 Protein involved in outer membrane biogenesis K07289 - - 0.000000000000002908 89.0
SYD3_k127_9612147_27 Metallo-beta-lactamase superfamily - - - 0.00000000000001855 88.0
SYD3_k127_9612147_28 Tetratricopeptide repeat K05807 - - 0.0000000000001944 81.0
SYD3_k127_9612147_29 CAAX protease self-immunity K07052 - - 0.0000000618 63.0
SYD3_k127_9612147_3 Mur ligase middle domain K02558 - 6.3.2.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 462.0
SYD3_k127_9612147_30 Protein involved in outer membrane biogenesis K07289 - - 0.0002236 54.0
SYD3_k127_9612147_4 Selenocysteine lyase K04127 - 5.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003117 405.0
SYD3_k127_9612147_5 saccharopine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006488 346.0
SYD3_k127_9612147_6 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001039 266.0
SYD3_k127_9612147_7 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000006181 259.0
SYD3_k127_9612147_8 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000001529 262.0
SYD3_k127_9612147_9 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000002261 247.0
SYD3_k127_9626274_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1371.0
SYD3_k127_9626274_1 PFAM peptidase M1, membrane alanine aminopeptidase - - - 0.0 1042.0
SYD3_k127_9626274_11 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000001066 284.0
SYD3_k127_9626274_12 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001744 269.0
SYD3_k127_9626274_13 3'-5' exonuclease K03684 - 3.1.13.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000806 262.0
SYD3_k127_9626274_14 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000002289 252.0
SYD3_k127_9626274_15 Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000007905 243.0
SYD3_k127_9626274_16 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000006125 243.0
SYD3_k127_9626274_17 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000000000004977 211.0
SYD3_k127_9626274_18 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000000004295 166.0
SYD3_k127_9626274_19 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000002634 172.0
SYD3_k127_9626274_2 SMART Elongator protein 3 MiaB NifB - - - 2.028e-230 722.0
SYD3_k127_9626274_20 - - - - 0.00000000000000000000000000000000000004 147.0
SYD3_k127_9626274_21 Chalcone isomerase-like - - - 0.00000000000000000000000000000000001503 143.0
SYD3_k127_9626274_22 haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.00000000000000000000000000001182 130.0
SYD3_k127_9626274_23 Transglutaminase-like superfamily - - - 0.0000000000000000000000001459 120.0
SYD3_k127_9626274_25 Belongs to the peptidase S1C family - - - 0.0000000000001324 81.0
SYD3_k127_9626274_3 protease with the C-terminal PDZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005023 466.0
SYD3_k127_9626274_4 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007069 437.0
SYD3_k127_9626274_5 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003982 383.0
SYD3_k127_9626274_6 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 365.0
SYD3_k127_9626274_7 PFAM Peptidase M16 inactive domain K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009107 368.0
SYD3_k127_9626274_8 Amino acid kinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 332.0
SYD3_k127_9626274_9 Tetrahydrodipicolinate N-succinyltransferase N-terminal K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001685 299.0
SYD3_k127_9657965_0 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 1.264e-215 681.0
SYD3_k127_9657965_1 helicase superfamily c-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008483 407.0
SYD3_k127_9657965_2 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000000000000000000000000000000000000000000000002806 233.0
SYD3_k127_9657965_3 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K05970 - 3.1.1.53 0.0000000002208 74.0
SYD3_k127_9665953_0 PFAM aminotransferase class-III K01845,K21585 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006083,GO:0006091,GO:0006113,GO:0006520,GO:0006553,GO:0006554,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009068,GO:0009987,GO:0015980,GO:0016020,GO:0016054,GO:0016740,GO:0016769,GO:0016853,GO:0016866,GO:0016869,GO:0016999,GO:0017144,GO:0018130,GO:0019438,GO:0019475,GO:0019477,GO:0019665,GO:0019666,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0033013,GO:0033014,GO:0034641,GO:0036094,GO:0040007,GO:0042168,GO:0042286,GO:0042440,GO:0042737,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044271,GO:0044281,GO:0044282,GO:0044464,GO:0046148,GO:0046395,GO:0046440,GO:0046483,GO:0046501,GO:0046983,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0055114,GO:0070279,GO:0071704,GO:0071944,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606 2.6.1.111,5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005981 524.0
SYD3_k127_9665953_1 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 449.0
SYD3_k127_9665953_2 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001055 284.0
SYD3_k127_9665953_3 Belongs to the UPF0173 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003227 267.0
SYD3_k127_967801_0 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 436.0
SYD3_k127_967801_1 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 401.0
SYD3_k127_967801_10 PFAM response regulator receiver K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004848 253.0
SYD3_k127_967801_11 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K20810 - 3.5.4.40 0.0000000000000000000000000000000000000000000000000000000000000003021 236.0
SYD3_k127_967801_12 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000003843 216.0
SYD3_k127_967801_13 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0044237,GO:0044249,GO:0051186,GO:0051188 2.5.1.129 0.000000000000000000000000000000000000000000000000000006676 196.0
SYD3_k127_967801_14 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000001527 149.0
SYD3_k127_967801_15 Protein of unknown function (DUF3450) - - - 0.000000000000000000000000000000003385 151.0
SYD3_k127_967801_16 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000000000000000000000000165 117.0
SYD3_k127_967801_17 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843 - - 0.00000000000000000000000005894 120.0
SYD3_k127_967801_18 PFAM Uncharacterised protein family (UPF0153) - - - 0.00000000000000000000000006099 114.0
SYD3_k127_967801_19 CHAD - - - 0.0000000000000000000000007674 122.0
SYD3_k127_967801_2 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 387.0
SYD3_k127_967801_20 Glutathione peroxidase - - - 0.000000000000000000000895 110.0
SYD3_k127_967801_22 Biopolymer transporter TonB K03832 - - 0.00000000000000003468 94.0
SYD3_k127_967801_23 - - - - 0.000000000004089 73.0
SYD3_k127_967801_24 Tetratricopeptide repeat - - - 0.0000007086 61.0
SYD3_k127_967801_3 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006947 356.0
SYD3_k127_967801_4 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 346.0
SYD3_k127_967801_5 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007443 316.0
SYD3_k127_967801_6 Glucose dehydrogenase C-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 312.0
SYD3_k127_967801_7 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003153 293.0
SYD3_k127_967801_8 uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000001328 277.0
SYD3_k127_967801_9 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000001004 274.0
SYD3_k127_9684111_0 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000002109 182.0
SYD3_k127_9684111_1 LPXTG-motif cell wall anchor domain - - - 0.000000000000000000000000002907 119.0
SYD3_k127_9727573_0 B12 binding domain K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0019842,GO:0031419,GO:0032259,GO:0034641,GO:0035999,GO:0036094,GO:0036211,GO:0042084,GO:0042558,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050667,GO:0051186,GO:0071704,GO:0097159,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 0.0 1571.0
SYD3_k127_9727573_1 ligase activity, forming nitrogen-metal bonds K02230 - 6.6.1.2 0.0 1357.0
SYD3_k127_9727573_10 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 338.0
SYD3_k127_9727573_11 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 295.0
SYD3_k127_9727573_12 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001913 289.0
SYD3_k127_9727573_13 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000009923 247.0
SYD3_k127_9727573_14 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000005852 228.0
SYD3_k127_9727573_15 Belongs to the proline racemase family K01777 - 5.1.1.4 0.0000000000000000000000000000000000000000000000000000000003074 216.0
SYD3_k127_9727573_16 hemolysin - - - 0.0000000000000000000000000000000000000000000000000000000009595 212.0
SYD3_k127_9727573_17 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000002545 200.0
SYD3_k127_9727573_18 Acyl-transferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000001652 211.0
SYD3_k127_9727573_19 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000293 181.0
SYD3_k127_9727573_2 Molybdopterin oxidoreductase, iron-sulfur binding subunit K00184 - - 4.867e-282 909.0
SYD3_k127_9727573_20 Protein of unknown function (DUF3341) - - - 0.00000000000000000000000000000000000000000000004234 192.0
SYD3_k127_9727573_21 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000001309 192.0
SYD3_k127_9727573_22 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000003396 172.0
SYD3_k127_9727573_23 Cupin 2, conserved barrel domain protein K11477 - - 0.000000000000000000000000000000001059 136.0
SYD3_k127_9727573_24 - - - - 0.000000000000000000000000000000001495 136.0
SYD3_k127_9727573_25 Haem-degrading - - - 0.0000000000000000000000000004963 123.0
SYD3_k127_9727573_26 cell redox homeostasis K02199,K03671 - - 0.00000000000000000000000003724 119.0
SYD3_k127_9727573_27 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000004335 105.0
SYD3_k127_9727573_28 Frataxin-like domain K06202 - - 0.000000000000000000001319 98.0
SYD3_k127_9727573_29 COG2146 Ferredoxin subunits of nitrite reductase and K00363,K05710 - 1.7.1.15 0.000000000000000000001558 107.0
SYD3_k127_9727573_3 choline dehydrogenase activity - - - 1.235e-253 804.0
SYD3_k127_9727573_30 DinB family - - - 0.00000000000000000000403 107.0
SYD3_k127_9727573_32 Prokaryotic Cytochrome C oxidase subunit IV - - - 0.0001401 51.0
SYD3_k127_9727573_4 Polysulphide reductase, NrfD K00185 - - 1.178e-224 708.0
SYD3_k127_9727573_5 gluconolactonase activity K01053 - 3.1.1.17 1.233e-207 666.0
SYD3_k127_9727573_6 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 551.0
SYD3_k127_9727573_7 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 427.0
SYD3_k127_9727573_8 Glucose dehydrogenase C-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 406.0
SYD3_k127_9727573_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 372.0
SYD3_k127_9752765_0 Nad-dependent epimerase dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 297.0
SYD3_k127_9752765_1 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000003625 238.0
SYD3_k127_9755325_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000002353 61.0
SYD3_k127_9755325_1 Belongs to the glycosyl hydrolase family 6 K01218 - 3.2.1.78 0.0001023 50.0
SYD3_k127_9755325_2 metallopeptidase activity - - - 0.0008314 52.0
SYD3_k127_9838185_0 amine dehydrogenase activity - - - 1.56e-235 762.0
SYD3_k127_9838185_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. K12266 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 575.0
SYD3_k127_9838185_10 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000000000002259 137.0
SYD3_k127_9838185_11 Protease prsW family - - - 0.00000000000000000000000000003745 136.0
SYD3_k127_9838185_12 Histidine kinase-like ATPase domain - - - 0.0000000000000000005258 92.0
SYD3_k127_9838185_13 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.000001046 54.0
SYD3_k127_9838185_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003996 531.0
SYD3_k127_9838185_3 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 477.0
SYD3_k127_9838185_4 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 430.0
SYD3_k127_9838185_5 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 425.0
SYD3_k127_9838185_6 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 410.0
SYD3_k127_9838185_7 hydrolase of the alpha beta superfamily K07017 - - 0.00000000000000000000000000000000000000000000000000000000000000000001051 266.0
SYD3_k127_9838185_8 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016226,GO:0018282,GO:0018283,GO:0019538,GO:0022607,GO:0030091,GO:0031163,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051186,GO:0071704,GO:0071840,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000001326 205.0
SYD3_k127_9838185_9 PFAM sigma-70 region 2 domain protein K03088 - - 0.000000000000000000000000000001915 126.0
SYD3_k127_9870318_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 7.926e-246 793.0
SYD3_k127_9870318_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.05e-242 760.0
SYD3_k127_9870318_10 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009241 304.0
SYD3_k127_9870318_11 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000002832 223.0
SYD3_k127_9870318_12 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0022804,GO:0022857,GO:0022884,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0040007,GO:0042886,GO:0042887,GO:0043953,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.00000000000000000000000000000000000000000000000000000004987 205.0
SYD3_k127_9870318_13 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000004625 199.0
SYD3_k127_9870318_14 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.0000000000000000000000000000000000001322 159.0
SYD3_k127_9870318_15 PFAM glycine cleavage T protein (aminomethyl transferase) K00605 - 2.1.2.10 0.0000000000000000000000000000000000002143 155.0
SYD3_k127_9870318_16 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0032991,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051704,GO:0061077,GO:0101031,GO:1990220 - 0.000000000000000000000000000000000000721 141.0
SYD3_k127_9870318_17 PFAM glycosyl transferase family 9 K02841 - - 0.000000000000000000000000000000000001069 156.0
SYD3_k127_9870318_18 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.00000000000000000000000000000000001039 157.0
SYD3_k127_9870318_19 Belongs to the ClpA ClpB family K03695,K03696 - - 0.00000000000000000000000000000000001661 155.0
SYD3_k127_9870318_2 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 4.81e-232 732.0
SYD3_k127_9870318_20 - - - - 0.0000000000000000000000000000000002139 144.0
SYD3_k127_9870318_21 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000004584 128.0
SYD3_k127_9870318_22 Heat shock protein DnaJ domain protein - - - 0.00000000000000000001236 108.0
SYD3_k127_9870318_23 IgA Peptidase M64 - - - 0.000000000000000005077 99.0
SYD3_k127_9870318_24 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03116,K03117 - - 0.0000000000002529 74.0
SYD3_k127_9870318_25 HemY protein K02498 - - 0.00000000001125 73.0
SYD3_k127_9870318_26 Belongs to the UPF0434 family K09791 - - 0.00000000003894 76.0
SYD3_k127_9870318_27 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000008633 68.0
SYD3_k127_9870318_28 RIO1 family - - - 0.00000001077 68.0
SYD3_k127_9870318_3 Cleaves the N-terminal amino acid of tripeptides K01258 - 3.4.11.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009101 522.0
SYD3_k127_9870318_4 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 385.0
SYD3_k127_9870318_5 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007141 362.0
SYD3_k127_9870318_6 PFAM Peptidase M20 K01436,K12940 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003228 362.0
SYD3_k127_9870318_7 Arabinose 5-phosphate isomerase K06041 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0005996,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0019146,GO:0019294,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0046364,GO:0046394,GO:0046400,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 347.0
SYD3_k127_9870318_8 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000789 334.0
SYD3_k127_9870318_9 PFAM DAHP synthetase I K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 317.0
SYD3_k127_9873569_0 FAD binding domain K00486 - 1.14.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 365.0
SYD3_k127_9873569_1 Aminotransferase class-V K01556 - 3.7.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004817 334.0
SYD3_k127_9923925_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1142.0
SYD3_k127_9923925_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1094.0
SYD3_k127_9923925_10 PFAM Peptidase M23 - - - 0.00000000000000000000000000000000001531 137.0
SYD3_k127_9923925_11 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000002155 153.0
SYD3_k127_9923925_12 Acyl-transferase K00655 - 2.3.1.51 0.00000000000000000000000000000002631 138.0
SYD3_k127_9923925_13 Domain of unknown function DUF302 - - - 0.000000000000000000000000000002892 134.0
SYD3_k127_9923925_14 RNA recognition motif - - - 0.00000000000000000000000000008012 118.0
SYD3_k127_9923925_15 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000002473 114.0
SYD3_k127_9923925_16 Sulfurtransferase - - - 0.000000000000000173 81.0
SYD3_k127_9923925_17 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000001819 83.0
SYD3_k127_9923925_18 TIGRFAM TonB family protein K03832 - - 0.0000000000004154 76.0
SYD3_k127_9923925_19 Methyltransferase - - - 0.00000000001078 75.0
SYD3_k127_9923925_2 Deoxyribodipyrimidine photo-lyase K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006295 585.0
SYD3_k127_9923925_20 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000269 73.0
SYD3_k127_9923925_21 Putative zinc-finger - - - 0.00000000506 63.0
SYD3_k127_9923925_22 Uncharacterised protein family (UPF0158) - - - 0.00000008381 63.0
SYD3_k127_9923925_3 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005863 450.0
SYD3_k127_9923925_4 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 436.0
SYD3_k127_9923925_5 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 397.0
SYD3_k127_9923925_6 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000008018 205.0
SYD3_k127_9923925_7 spore germination K07790 - - 0.0000000000000000000000000000000000000000000000003294 198.0
SYD3_k127_9923925_8 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000001802 183.0
SYD3_k127_9923925_9 Putative zinc-finger K03088 - - 0.0000000000000000000000000000000000003524 147.0
SYD3_k127_9949499_0 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 426.0
SYD3_k127_9949499_1 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001139 287.0
SYD3_k127_9949499_2 Zn_pept K05996 - 3.4.17.18 0.0000000000000000000000000000000000000000000000000000000000000003921 250.0
SYD3_k127_9949499_3 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000000000000000000000002667 183.0
SYD3_k127_9949499_4 Prokaryotic N-terminal methylation motif K02456 - - 0.000000000000000000000003894 114.0
SYD3_k127_9949499_5 CarboxypepD_reg-like domain K13276 - - 0.000000000007365 79.0
SYD3_k127_9949499_7 - - - - 0.00005114 50.0