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Overview

ID MAG03789
Name SYD3_bin.15
Sample SMP0096
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Thermoanaerobaculia
Order UBA5066
Family Gp7-AA6
Genus Gp7-AA6
Species
Assembly information
Completeness (%) 91.69
Contamination (%) 6.52
GC content (%) 67.0
N50 (bp) 13,410
Genome size (bp) 3,092,091

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2695

Gene name Description KEGG GOs EC E-value Score Sequence
SYD3_k127_10036773_0 Protein kinase domain K12132 - 2.7.11.1 2.623e-198 644.0
SYD3_k127_10036773_1 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002572 360.0
SYD3_k127_10036773_2 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006764 340.0
SYD3_k127_10036773_4 PIN domain - - - 0.000000000000000661 85.0
SYD3_k127_10048571_0 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004278 404.0
SYD3_k127_10048571_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 387.0
SYD3_k127_10048571_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003687 275.0
SYD3_k127_10048571_3 Cupin domain protein - - - 0.0000000000000000000000000000004136 130.0
SYD3_k127_10048571_4 TIGRFAM Caa(3)-type oxidase, subunit IV K02277 - 1.9.3.1 0.0000000000000000000123 94.0
SYD3_k127_10048571_5 nuclease activity - GO:0001666,GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016787,GO:0016788,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0034641,GO:0036293,GO:0040008,GO:0043170,GO:0043207,GO:0044237,GO:0044238,GO:0044403,GO:0044419,GO:0045926,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051701,GO:0051704,GO:0051707,GO:0060255,GO:0065007,GO:0070482,GO:0071704,GO:0075136,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:2000112,GO:2000113 - 0.000000000006925 66.0
SYD3_k127_10056684_0 NMT1-like family K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 493.0
SYD3_k127_10056684_1 Aldehyde dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006761 435.0
SYD3_k127_10056684_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003183 263.0
SYD3_k127_10056684_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000005861 207.0
SYD3_k127_10056684_4 cellulose binding - - - 0.0000000000000000000000000000000000000000000000002273 198.0
SYD3_k127_10056684_5 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000004971 105.0
SYD3_k127_10068838_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 463.0
SYD3_k127_10068838_1 Dehydrogenase K00030,K00052 - 1.1.1.41,1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 400.0
SYD3_k127_10068838_10 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000003243 222.0
SYD3_k127_10068838_11 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000001178 200.0
SYD3_k127_10068838_12 Methionine biosynthesis protein MetW K18827 - 2.1.1.294,2.7.1.181 0.0000000000000000000000000000000000000000000005503 186.0
SYD3_k127_10068838_13 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0008150,GO:0015934,GO:0016020,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.0000000000000000000000000000000000000000002498 162.0
SYD3_k127_10068838_14 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000002789 165.0
SYD3_k127_10068838_15 TIGRFAM Diguanylate cyclase - - - 0.0000000000000000000000000000000000004637 154.0
SYD3_k127_10068838_16 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.0000000000000000000000000000008314 129.0
SYD3_k127_10068838_17 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 GO:0008150,GO:0040007 - 0.00000000000000000000000000007752 125.0
SYD3_k127_10068838_18 Belongs to the ompA family K12216 - - 0.00000000000000000000000002308 123.0
SYD3_k127_10068838_19 Ribosomal protein S16 K02959 - - 0.000000000000000001558 87.0
SYD3_k127_10068838_2 Oligopeptide/dipeptide transporter, C-terminal region K02032,K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 342.0
SYD3_k127_10068838_20 Ferredoxin K04755 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0006790,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016043,GO:0016226,GO:0016491,GO:0022607,GO:0022900,GO:0031163,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051540,GO:0055114,GO:0071840 - 0.00000000000003529 82.0
SYD3_k127_10068838_21 Belongs to the UPF0109 family K06960 GO:0008150,GO:0040007 - 0.00000002012 59.0
SYD3_k127_10068838_3 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 295.0
SYD3_k127_10068838_4 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003958 279.0
SYD3_k127_10068838_5 CBS domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002671 286.0
SYD3_k127_10068838_6 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005418 263.0
SYD3_k127_10068838_7 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000001429 240.0
SYD3_k127_10068838_8 Domain of unknown function (DUF1730) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000002446 240.0
SYD3_k127_10068838_9 Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000008746 225.0
SYD3_k127_10072812_0 Putative glucoamylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002737 549.0
SYD3_k127_10072812_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 419.0
SYD3_k127_10072812_2 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005451 282.0
SYD3_k127_10072812_3 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0000000000000000000000000000000000000000001542 164.0
SYD3_k127_10072812_4 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000004152 166.0
SYD3_k127_10072812_5 Domain of unknown function (DUF2383) - - - 0.00000000000001251 84.0
SYD3_k127_10072812_6 - - - - 0.0000000000004347 78.0
SYD3_k127_10072812_7 - - - - 0.00000001381 57.0
SYD3_k127_1015296_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006876 404.0
SYD3_k127_1015296_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 335.0
SYD3_k127_1015296_2 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 322.0
SYD3_k127_1015296_3 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 308.0
SYD3_k127_1015296_4 Bacterial sugar transferase K03606 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002816 286.0
SYD3_k127_1015296_5 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000007807 248.0
SYD3_k127_1015296_6 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000353 190.0
SYD3_k127_1015296_7 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.00000000000000000000000004877 125.0
SYD3_k127_1015296_8 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000004224 98.0
SYD3_k127_1015296_9 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000004124 99.0
SYD3_k127_10165944_0 B12 binding domain K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006672 509.0
SYD3_k127_10165944_1 cellulase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 371.0
SYD3_k127_10165944_10 Photosynthetic reaction centre cytochrome C subunit - - - 0.00000000000000000004446 97.0
SYD3_k127_10165944_11 - - - - 0.0000000000000001211 81.0
SYD3_k127_10165944_2 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008636 269.0
SYD3_k127_10165944_3 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001719 288.0
SYD3_k127_10165944_4 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000001324 201.0
SYD3_k127_10165944_5 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000001158 198.0
SYD3_k127_10165944_6 DinB superfamily - - - 0.00000000000000000000000000000000000009633 151.0
SYD3_k127_10165944_7 - - - - 0.00000000000000000000000000000000652 136.0
SYD3_k127_10165944_8 DinB superfamily - - - 0.000000000000000000000000000002376 138.0
SYD3_k127_10165944_9 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides - - - 0.0000000000000000000000000001121 134.0
SYD3_k127_10167728_0 Belongs to the sigma-70 factor family. ECF subfamily - - - 1.541e-207 651.0
SYD3_k127_10167728_1 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006361 484.0
SYD3_k127_10167728_10 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000000000000000000003723 229.0
SYD3_k127_10167728_11 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000006347 215.0
SYD3_k127_10167728_12 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.000000000000000000000000000000000000000000000000005491 194.0
SYD3_k127_10167728_13 histidine triad K02503 - - 0.000000000000000000000000000000001432 150.0
SYD3_k127_10167728_14 50S ribosomal protein L31 K02909 - - 0.00000000000000000000000000001852 119.0
SYD3_k127_10167728_15 Proline dehydrogenase K00318 - - 0.00000000000000000003145 91.0
SYD3_k127_10167728_2 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 460.0
SYD3_k127_10167728_3 Zinc carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 476.0
SYD3_k127_10167728_4 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006345 435.0
SYD3_k127_10167728_5 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003199 387.0
SYD3_k127_10167728_6 transport system, ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 347.0
SYD3_k127_10167728_7 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 337.0
SYD3_k127_10167728_8 3-deoxy-7-phosphoheptulonate synthase activity K00661,K03856,K04092,K04093,K04516,K04518,K14170,K14187 GO:0003674,GO:0003824,GO:0004106,GO:0004664,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006558,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0017144,GO:0019438,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 1.3.1.12,2.3.1.79,2.5.1.54,4.2.1.51,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006638 298.0
SYD3_k127_10167728_9 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000384 314.0
SYD3_k127_10189937_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 574.0
SYD3_k127_10189937_1 Hydrolase, TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000003876 218.0
SYD3_k127_10189937_2 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000001084 184.0
SYD3_k127_10189937_3 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000009882 144.0
SYD3_k127_10189937_4 Protein of unknown function (DUF2905) - - - 0.00000000000311 78.0
SYD3_k127_10189937_5 Zincin-like metallopeptidase - - - 0.0003644 52.0
SYD3_k127_10221838_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1065.0
SYD3_k127_10221838_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 1.601e-247 792.0
SYD3_k127_10221838_10 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 355.0
SYD3_k127_10221838_11 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005872 357.0
SYD3_k127_10221838_12 GTP binding K06883 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002156 269.0
SYD3_k127_10221838_13 Lysin motif K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002231 265.0
SYD3_k127_10221838_14 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000001531 248.0
SYD3_k127_10221838_15 PFAM methyltransferase - - - 0.0000000000000000000000000000000000000000000000000001693 194.0
SYD3_k127_10221838_16 response regulator - - - 0.00000000000000000000000000000000000000000000004676 185.0
SYD3_k127_10221838_17 CarD-like/TRCF domain K07736 - - 0.000000000000000000000000000000000000003273 152.0
SYD3_k127_10221838_18 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000001322 151.0
SYD3_k127_10221838_19 Thioredoxin - - - 0.000000000000000000000000000000001236 141.0
SYD3_k127_10221838_2 Heat shock 70 kDa protein K04043 - - 4.294e-236 745.0
SYD3_k127_10221838_20 Tetratricopeptide repeat - - - 0.0000000000000000000000000002116 132.0
SYD3_k127_10221838_21 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000005419 125.0
SYD3_k127_10221838_22 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000001296 125.0
SYD3_k127_10221838_23 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000002992 113.0
SYD3_k127_10221838_24 Domain of unknown function (DUF2520) - - - 0.000000000000000000004057 104.0
SYD3_k127_10221838_25 Regulatory protein recX K03565 GO:0003674,GO:0005488,GO:0005515,GO:0006282,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0019219,GO:0019222,GO:0019899,GO:0030234,GO:0031323,GO:0031668,GO:0033554,GO:0043086,GO:0044092,GO:0048583,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051716,GO:0060255,GO:0065007,GO:0065009,GO:0071496,GO:0080090,GO:0080134,GO:0080135,GO:0098772,GO:2001020 - 0.000000000002336 74.0
SYD3_k127_10221838_26 PFAM Rhodanese domain protein - - - 0.0000000008368 65.0
SYD3_k127_10221838_27 Tetratricopeptide repeat - - - 0.0001407 53.0
SYD3_k127_10221838_3 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 655.0
SYD3_k127_10221838_4 PFAM Carboxylyase-related protein K03182 - 4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004458 607.0
SYD3_k127_10221838_5 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 517.0
SYD3_k127_10221838_6 Magnesium chelatase, subunit ChlI K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000802 503.0
SYD3_k127_10221838_7 AAA ATPase, central domain protein K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009361 473.0
SYD3_k127_10221838_8 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009657 460.0
SYD3_k127_10221838_9 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 401.0
SYD3_k127_10245597_0 PFAM Type II secretion system protein E K02652 - - 3.443e-213 677.0
SYD3_k127_10245597_1 Type ii and iii secretion system protein K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 317.0
SYD3_k127_10245597_10 PFAM Fimbrial assembly family protein K02663 - - 0.00001592 56.0
SYD3_k127_10245597_2 PFAM Type II secretion system F domain K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002221 283.0
SYD3_k127_10245597_3 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000006671 261.0
SYD3_k127_10245597_4 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000004209 229.0
SYD3_k127_10245597_5 lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000009774 189.0
SYD3_k127_10245597_6 RNA polymerase sigma factor K03088 - - 0.000000000000000000000001292 115.0
SYD3_k127_10245597_7 Pilus assembly protein K02662 - - 0.000000006085 70.0
SYD3_k127_10245597_8 Pilus assembly protein, PilO K02664 - - 0.000001626 59.0
SYD3_k127_10245597_9 general secretion pathway protein D K02453 - - 0.00001136 56.0
SYD3_k127_10251880_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 4.556e-223 703.0
SYD3_k127_10251880_1 mRNA binding - - - 0.0000000000000000000000003685 106.0
SYD3_k127_10251880_2 PFAM peptidase U62 modulator of DNA gyrase K03568 - - 0.0000000000000000000008313 111.0
SYD3_k127_10285129_0 lysine biosynthetic process via aminoadipic acid - - - 1.194e-222 715.0
SYD3_k127_10285129_1 FAD dependent oxidoreductase K00303 - 1.5.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003308 361.0
SYD3_k127_10324918_0 Polysaccharide biosynthesis protein K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 352.0
SYD3_k127_10324918_1 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004654 264.0
SYD3_k127_10324918_2 UDP binding domain K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000116 238.0
SYD3_k127_10324918_3 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000002993 250.0
SYD3_k127_10324918_4 Iron-sulfur cluster assembly protein K03593 - - 0.000000000000000000000000000000000000000004244 171.0
SYD3_k127_10324918_5 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.0000000000000000000000000000000000000001962 161.0
SYD3_k127_10324918_6 MlaD protein K02067 - - 0.0000000000000000000000000008502 126.0
SYD3_k127_10324918_7 polysaccharide deacetylase - - - 0.00000000000000004477 95.0
SYD3_k127_10324918_8 Hep Hag repeat protein - - - 0.0000000005243 72.0
SYD3_k127_10396927_0 cellulose binding - - - 2.868e-232 756.0
SYD3_k127_10396927_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 603.0
SYD3_k127_10396927_10 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000001602 245.0
SYD3_k127_10396927_11 Domain of unknown function (DUF3943) - - - 0.000000000000000000000000000000000000000000000000000000000000000001972 243.0
SYD3_k127_10396927_12 phosphoenolpyruvate-dependent sugar phosphotransferase system K02768,K02769,K02770,K02806 - 2.7.1.202 0.00000000000000000000000000000000000000000001507 171.0
SYD3_k127_10396927_13 - - - - 0.00000000000000000000000000000000000004065 150.0
SYD3_k127_10396927_14 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000001737 156.0
SYD3_k127_10396927_15 Beta/Gamma crystallin - - - 0.000000000000000000000000000001416 134.0
SYD3_k127_10396927_16 phosphoenolpyruvate-dependent sugar phosphotransferase system K02768,K02769,K02770,K02806 - 2.7.1.202 0.00000000000000003633 92.0
SYD3_k127_10396927_17 AsmA family K07289 - - 0.000000001238 72.0
SYD3_k127_10396927_18 C4-type zinc ribbon domain K07164 - - 0.00000005304 64.0
SYD3_k127_10396927_2 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006798 524.0
SYD3_k127_10396927_3 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 450.0
SYD3_k127_10396927_4 PFAM DAHP synthetase I KDSA K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005887 430.0
SYD3_k127_10396927_5 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 422.0
SYD3_k127_10396927_6 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 410.0
SYD3_k127_10396927_7 Phospholipase D. Active site motifs. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005884 280.0
SYD3_k127_10396927_8 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002327 247.0
SYD3_k127_10396927_9 Belongs to the FPG family K05522,K10563 GO:0000702,GO:0000703,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0003906,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006289,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0008150,GO:0008152,GO:0008534,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034599,GO:0034641,GO:0042221,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0070887,GO:0071704,GO:0090304,GO:0097159,GO:0097506,GO:0140097,GO:1901360,GO:1901363 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000004237 243.0
SYD3_k127_10399314_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1325.0
SYD3_k127_10399314_1 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 487.0
SYD3_k127_10399314_2 Biotin-lipoyl like K07799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 347.0
SYD3_k127_10399314_3 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 312.0
SYD3_k127_10399314_4 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000001479 244.0
SYD3_k127_10399314_5 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000000002043 243.0
SYD3_k127_10399314_6 Bacterial regulatory proteins, tetR family - - - 0.000000000002469 76.0
SYD3_k127_1042054_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 6.446e-296 932.0
SYD3_k127_1042054_1 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007693 288.0
SYD3_k127_1042054_2 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.00000000000000000000006331 113.0
SYD3_k127_1042054_3 outer membrane autotransporter barrel domain protein - - - 0.00000000000002103 81.0
SYD3_k127_10430821_0 ATPases associated with a variety of cellular activities K09689,K09691 - 3.6.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 339.0
SYD3_k127_10430821_1 Glycosyltransferase like family 2 K20444 - - 0.0000000000000000000000000000000000000000000000000000001022 218.0
SYD3_k127_10430821_2 transferase activity, transferring glycosyl groups K13659 - 2.4.1.264 0.000000000000000000000000000000000000149 152.0
SYD3_k127_10430821_3 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000000000000000009511 155.0
SYD3_k127_10430821_4 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000002821 145.0
SYD3_k127_10430821_5 Glycosyl transferase, family 2 - - - 0.0000000000000005517 91.0
SYD3_k127_10430821_6 PFAM glycosyl transferase group 1 - - - 0.00000000000009401 85.0
SYD3_k127_10430821_7 Acetyltransferase (GNAT) domain - - - 0.000000000001086 79.0
SYD3_k127_10462499_0 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000003173 153.0
SYD3_k127_10462499_1 high-affinity ferrous iron transmembrane transporter activity K07243 - - 0.00000000000000000000000000000000002062 155.0
SYD3_k127_10462499_2 Tetratricopeptide repeat - - - 0.00000000000000000000000002898 114.0
SYD3_k127_10462499_3 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000004778 85.0
SYD3_k127_10462499_4 Carboxypeptidase regulatory-like domain - - - 0.0000000003836 65.0
SYD3_k127_10480468_0 PAS fold - - - 1.347e-203 653.0
SYD3_k127_10480468_1 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 529.0
SYD3_k127_10480468_2 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008875 421.0
SYD3_k127_10480468_3 May be involved in the transport of PQQ or its precursor to the periplasm - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 328.0
SYD3_k127_10480468_4 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000000000000000000000000000005364 231.0
SYD3_k127_10480468_5 NAD(P)H-dependent FMN reductase K00299 - 1.5.1.38 0.0000000000000000000000000000000000000000000000000000000001898 210.0
SYD3_k127_10480468_6 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000007669 166.0
SYD3_k127_10480468_7 DoxX-like family - - - 0.0000000000000000000000000000000000000001678 154.0
SYD3_k127_10480468_8 Transcriptional regulator K07506 - - 0.0000000000000000000000000000000001947 140.0
SYD3_k127_10480468_9 - - - - 0.000001079 59.0
SYD3_k127_10521095_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004179 555.0
SYD3_k127_10521095_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006309 522.0
SYD3_k127_10521095_10 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000002945 220.0
SYD3_k127_10521095_11 PFAM ABC transporter related K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000004991 190.0
SYD3_k127_10521095_12 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000003138 128.0
SYD3_k127_10521095_13 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.000000000000000000000000000009193 133.0
SYD3_k127_10521095_14 Methionine biosynthesis protein MetW K20444 - - 0.0000000000000000000000000004093 126.0
SYD3_k127_10521095_15 phosphorelay signal transduction system - - - 0.0000000000000000000001087 109.0
SYD3_k127_10521095_2 Carboxyl transferase domain K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003755 360.0
SYD3_k127_10521095_3 Glutamate formiminotransferase K00603,K13990 - 2.1.2.5,4.3.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 360.0
SYD3_k127_10521095_4 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 341.0
SYD3_k127_10521095_5 Transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 301.0
SYD3_k127_10521095_6 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000001227 271.0
SYD3_k127_10521095_7 PFAM Mur ligase family, glutamate ligase domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000004461 263.0
SYD3_k127_10521095_8 response regulator K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001204 251.0
SYD3_k127_10521095_9 ABC-type Fe3 -siderophore transport system, permease component K02015 - - 0.00000000000000000000000000000000000000000000000000000000007399 228.0
SYD3_k127_10568184_0 Protein kinase domain K12132 - 2.7.11.1 6.302e-200 654.0
SYD3_k127_10568184_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003335 311.0
SYD3_k127_10568184_2 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000000000007103 196.0
SYD3_k127_10568184_3 PIN domain - - - 0.0000000000000000000000007823 108.0
SYD3_k127_10591496_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1311.0
SYD3_k127_10591496_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00322 - 1.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005205 621.0
SYD3_k127_10591496_10 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000001546 202.0
SYD3_k127_10591496_11 phosphoserine phosphatase activity K01768,K07315 - 3.1.3.3,4.6.1.1 0.00000000000000000000000000000000000000000000001094 193.0
SYD3_k127_10591496_12 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000000000000000002241 186.0
SYD3_k127_10591496_13 PFAM glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000033 162.0
SYD3_k127_10591496_14 sigma factor antagonist activity K04757 - 2.7.11.1 0.0000000000000000000000006492 109.0
SYD3_k127_10591496_15 DNA polymerase III K02341 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.000000000000000000000001208 119.0
SYD3_k127_10591496_16 antisigma factor binding - - - 0.0000000000000000003502 95.0
SYD3_k127_10591496_17 phosphorelay signal transduction system - - - 0.000000000000000003408 93.0
SYD3_k127_10591496_18 Tetratricopeptide repeat - - - 0.0000000000003085 82.0
SYD3_k127_10591496_19 Sodium/hydrogen exchanger family - - - 0.0000000001914 63.0
SYD3_k127_10591496_2 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003584 461.0
SYD3_k127_10591496_20 cell adhesion involved in biofilm formation - - - 0.0004692 52.0
SYD3_k127_10591496_3 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006203 324.0
SYD3_k127_10591496_4 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002105 291.0
SYD3_k127_10591496_5 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000001791 268.0
SYD3_k127_10591496_6 HlyD family secretion protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007044 275.0
SYD3_k127_10591496_7 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007449 260.0
SYD3_k127_10591496_8 COG0515 Serine threonine protein - - - 0.0000000000000000000000000000000000000000000000000000001952 217.0
SYD3_k127_10591496_9 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000001304 212.0
SYD3_k127_10616569_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0030554,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009412 428.0
SYD3_k127_10616569_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002979 372.0
SYD3_k127_10616569_2 Cell division protein FtsQ K03589 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0071944 - 0.0000007273 59.0
SYD3_k127_1063311_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007215 427.0
SYD3_k127_1063311_1 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 378.0
SYD3_k127_1063311_2 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000001394 62.0
SYD3_k127_10757057_0 lipoprotein localization to outer membrane K02004,K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001157 277.0
SYD3_k127_10757057_1 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005103 243.0
SYD3_k127_10757057_2 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000004877 228.0
SYD3_k127_10757057_3 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000001259 197.0
SYD3_k127_10757057_4 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000001106 99.0
SYD3_k127_10757057_5 Methyltransferase domain - - - 0.000000000000001645 89.0
SYD3_k127_10799550_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008338 329.0
SYD3_k127_10799550_1 Allophanate hydrolase subunit 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 325.0
SYD3_k127_10799550_2 ABC transporter permease K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001091 292.0
SYD3_k127_10799550_3 Belongs to the UPF0271 (lamB) family K07160 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008292 256.0
SYD3_k127_10799550_4 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002141 254.0
SYD3_k127_10799550_5 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000006442 246.0
SYD3_k127_10799550_6 COG0642 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000004189 226.0
SYD3_k127_10799550_7 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000000000000003694 147.0
SYD3_k127_10799550_8 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000001865 155.0
SYD3_k127_10831270_0 AMP-binding enzyme K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008966 523.0
SYD3_k127_10831270_1 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 452.0
SYD3_k127_10831270_2 SdrD B-like domain - - - 0.0000000000000000000001768 113.0
SYD3_k127_10849506_0 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005494 426.0
SYD3_k127_10849506_1 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 333.0
SYD3_k127_10849506_2 DNA-templated transcription, initiation - - - 0.000000000000000000000000000000000000000000000000001398 197.0
SYD3_k127_10849506_4 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000005024 132.0
SYD3_k127_10849506_5 helix_turn_helix, Lux Regulon - - - 0.000000005924 63.0
SYD3_k127_10849506_6 - - - - 0.00000001202 59.0
SYD3_k127_10849506_7 Vacuolar ATP synthase subunit D K02149 - - 0.0000466 52.0
SYD3_k127_109306_0 OST-HTH/LOTUS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000557 243.0
SYD3_k127_109306_1 protein, possibly involved in aromatic compounds catabolism - - - 0.00000000003614 70.0
SYD3_k127_109306_2 Glycine cleavage T protein (Aminomethyl transferase) K06980 GO:0003674,GO:0005488,GO:0005542,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016226,GO:0019842,GO:0022607,GO:0031163,GO:0031406,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0071840,GO:0072341,GO:0097159,GO:1901363 - 0.0000000001283 66.0
SYD3_k127_1093296_0 Oligoendopeptidase f - - - 1.082e-254 805.0
SYD3_k127_1093296_1 protein kinase activity - - - 7.382e-202 662.0
SYD3_k127_1093296_2 S-adenosyl-L-homocysteine hydrolase K01251 - 3.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005464 515.0
SYD3_k127_1133667_0 Involved in the tonB-independent uptake of proteins K01256,K03641 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007338 462.0
SYD3_k127_1133667_1 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002659 284.0
SYD3_k127_1133667_2 Domain of unknown function (DUF4440) - - - 0.000000000002702 75.0
SYD3_k127_1168832_0 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 304.0
SYD3_k127_1168832_1 Adenylate cyclase - - - 0.0000000000000000192 91.0
SYD3_k127_1168832_2 PAP2 superfamily - - - 0.000000000000006455 79.0
SYD3_k127_1168832_3 FHA domain K07315 - 3.1.3.3 0.0000000001748 70.0
SYD3_k127_1192468_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004062 306.0
SYD3_k127_1192468_1 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000001712 279.0
SYD3_k127_1192468_2 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.00000000000000000000000000000000000000000000000002874 193.0
SYD3_k127_1192468_3 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000000000000002794 147.0
SYD3_k127_1192468_5 peptidylprolyl isomerase K03769 - 5.2.1.8 0.000000000000004497 89.0
SYD3_k127_1192468_6 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.0000002158 56.0
SYD3_k127_1192468_7 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic - - - 0.000003599 53.0
SYD3_k127_1231677_0 Involved in the tonB-independent uptake of proteins - - - 3.928e-235 755.0
SYD3_k127_1231677_1 WD40 domain protein beta Propeller K12132 - 2.7.11.1 7.084e-225 726.0
SYD3_k127_1231677_2 Involved in the tonB-independent uptake of proteins - - - 1.67e-198 654.0
SYD3_k127_1231677_3 Involved in the tonB-independent uptake of proteins - - - 2.474e-195 636.0
SYD3_k127_1231677_4 OPT oligopeptide transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 505.0
SYD3_k127_1231677_5 - - - - 0.0000000000000000001425 100.0
SYD3_k127_1231677_6 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000001522 79.0
SYD3_k127_130216_0 cell shape determining protein MreB K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 531.0
SYD3_k127_130216_1 PFAM penicillin-binding protein transpeptidase K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 451.0
SYD3_k127_130216_10 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - - - 0.000000000000000000000000000000000000000002928 168.0
SYD3_k127_130216_11 Cell shape-determining protein MreC K03570 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007163,GO:0008150,GO:0008360,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0030428,GO:0031224,GO:0031226,GO:0042546,GO:0043621,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071554,GO:0071840,GO:0071944,GO:0071963 - 0.0000000000000251 87.0
SYD3_k127_130216_12 PFAM FecR protein - - - 0.000000847 61.0
SYD3_k127_130216_13 YceI-like domain - - - 0.0002926 46.0
SYD3_k127_130216_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003947 435.0
SYD3_k127_130216_3 DNA ligase K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 410.0
SYD3_k127_130216_4 Ribonuclease E/G family K08300,K08301 - 3.1.26.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004692 409.0
SYD3_k127_130216_5 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005898 364.0
SYD3_k127_130216_6 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007636 303.0
SYD3_k127_130216_7 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000136 276.0
SYD3_k127_130216_8 peptidyl-prolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000004379 269.0
SYD3_k127_130216_9 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000000008011 178.0
SYD3_k127_1373061_0 oligopeptide transporter, OPT family - - - 7.381e-221 704.0
SYD3_k127_1373061_1 ATPase activity K02045 - 3.6.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 597.0
SYD3_k127_1373061_10 Peptidase M16 inactive domain - - - 0.00000000000000000000000000000000000000000000000000003086 214.0
SYD3_k127_1373061_11 Putative glycolipid-binding K09957 - - 0.00000000000000000000000000000000000000000003442 175.0
SYD3_k127_1373061_12 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000002405 154.0
SYD3_k127_1373061_13 Glutaredoxin K03676 - - 0.00000000000861 66.0
SYD3_k127_1373061_14 - - - - 0.0000000007474 66.0
SYD3_k127_1373061_15 Putative porin - GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0000001649 63.0
SYD3_k127_1373061_2 Glycosyl hydrolase family 47 K01230 - 3.2.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006 515.0
SYD3_k127_1373061_3 COG1613 ABC-type sulfate transport system, periplasmic component K02048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007863 484.0
SYD3_k127_1373061_4 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 420.0
SYD3_k127_1373061_5 amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 397.0
SYD3_k127_1373061_6 Sulfate ABC transporter, inner membrane subunit CysW K02047 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 386.0
SYD3_k127_1373061_7 Binding-protein-dependent transport system inner membrane component K02046 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000891 362.0
SYD3_k127_1373061_8 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 352.0
SYD3_k127_1373061_9 Asparaginase K01424,K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.1,3.5.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 316.0
SYD3_k127_1376054_0 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 362.0
SYD3_k127_1376054_1 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 2.1.2.2 0.0000000000000000000000000000000000000000000000102 188.0
SYD3_k127_1376054_2 - - - - 0.00000000000003459 74.0
SYD3_k127_1376054_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000003943 73.0
SYD3_k127_1376054_4 - - - - 0.0005777 48.0
SYD3_k127_1381287_0 elongation factor G K02355 - - 9.024e-209 670.0
SYD3_k127_1381287_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004457 542.0
SYD3_k127_1381287_2 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000213 286.0
SYD3_k127_1381287_3 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000004535 262.0
SYD3_k127_1381287_4 TIGRFAM 6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000003671 197.0
SYD3_k127_1402859_0 Participates in initiation and elongation during chromosome replication K02314 GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000314 424.0
SYD3_k127_1402859_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 417.0
SYD3_k127_1402859_10 Sortase family K07284 - 3.4.22.70 0.00000001519 64.0
SYD3_k127_1402859_2 SAICAR synthetase K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008477 351.0
SYD3_k127_1402859_3 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000002562 274.0
SYD3_k127_1402859_4 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001562 268.0
SYD3_k127_1402859_5 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000002509 242.0
SYD3_k127_1402859_6 PFAM Mammalian cell entry related domain protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000003135 231.0
SYD3_k127_1402859_7 DNA polymerase X family K02347 - - 0.00000000000000000000000000000000000000000000000000001415 200.0
SYD3_k127_1402859_8 PFAM PHP domain K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000006024 190.0
SYD3_k127_1464313_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 1.782e-260 823.0
SYD3_k127_1464313_1 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006255 275.0
SYD3_k127_1464313_2 TIGRFAM hydrogenase (NiFe) small subunit (hydA) K06282,K18008 - 1.12.2.1,1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000218 257.0
SYD3_k127_1464313_3 Domain of unknown function (DUF4405) - - - 0.00000000000000000000000000000000000000000000000000000000687 207.0
SYD3_k127_1464313_4 PFAM peptidase M52 hydrogen uptake protein K03605 - - 0.00000000000000000000000000000000001123 143.0
SYD3_k127_1464313_5 permease K07243 - - 0.00000000005917 69.0
SYD3_k127_1490487_0 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 557.0
SYD3_k127_1490487_1 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005275 394.0
SYD3_k127_1490487_2 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007597 316.0
SYD3_k127_1490487_3 HlyD family secretion protein - - - 0.00000000000000000000000000000000000000000000000000000000005584 228.0
SYD3_k127_1490487_4 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000003746 205.0
SYD3_k127_1490487_5 Pyruvate phosphate dikinase - - - 0.0001986 52.0
SYD3_k127_1491258_0 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 321.0
SYD3_k127_1491258_1 Bacterial membrane protein, YfhO - - - 0.0000000495 62.0
SYD3_k127_1512595_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 508.0
SYD3_k127_1512595_1 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 467.0
SYD3_k127_1512595_2 Predicted membrane protein (DUF2238) K08984 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004258 287.0
SYD3_k127_1512595_3 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000006765 198.0
SYD3_k127_1512595_4 BON domain K04065 - - 0.0000002191 57.0
SYD3_k127_1537678_0 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004459 323.0
SYD3_k127_1537678_1 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001692 293.0
SYD3_k127_1537678_2 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001714 285.0
SYD3_k127_1537678_3 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000001188 218.0
SYD3_k127_1537678_4 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000001016 208.0
SYD3_k127_1537678_5 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000028 176.0
SYD3_k127_1537678_6 Glycine cleavage T-protein C-terminal barrel domain K00605,K06980 - 2.1.2.10 0.0000000000000000000000000000003147 134.0
SYD3_k127_1537678_7 acyl-CoA thioester hydrolase, YbgC YbaW family K07107 - - 0.00000000000000000000000000001284 127.0
SYD3_k127_1537678_8 membrane - - - 0.0000000000000000000000002563 117.0
SYD3_k127_1586957_0 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K00945,K02945,K03527 - 1.17.7.4,2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006914 368.0
SYD3_k127_1586957_1 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000185 267.0
SYD3_k127_1586957_2 NAD dependent epimerase/dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000002532 204.0
SYD3_k127_1586957_3 Iron-containing redox enzyme K06137 - 1.3.3.11 0.0000000000000000000000000000000000000000004437 164.0
SYD3_k127_1586957_4 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000003339 157.0
SYD3_k127_1586957_5 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K21142 - 2.8.1.12 0.0000000000000000000000000002395 118.0
SYD3_k127_1586957_6 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.000000000009172 68.0
SYD3_k127_1622481_0 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 5.808e-240 750.0
SYD3_k127_1622481_1 VIT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 404.0
SYD3_k127_1622481_2 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008169 364.0
SYD3_k127_1622481_3 PFAM alanine racemase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 324.0
SYD3_k127_1622481_4 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000005401 190.0
SYD3_k127_1622481_5 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000002421 140.0
SYD3_k127_1622481_6 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.000000000000000000000000000846 117.0
SYD3_k127_1649072_0 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004114 545.0
SYD3_k127_1649072_1 fructose-bisphosphate aldolase activity K01624 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000536 429.0
SYD3_k127_1649072_2 synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000002989 121.0
SYD3_k127_1652602_0 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000008138 196.0
SYD3_k127_1652602_1 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.0000000000000000000000000000000000000000000000000001612 204.0
SYD3_k127_1652602_2 related to Ser Thr protein kinases K07102 GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006022,GO:0006040,GO:0006082,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.1.221 0.000000000000000000000000005025 124.0
SYD3_k127_1652602_3 mttA/Hcf106 family K03116 - - 0.000000000001381 69.0
SYD3_k127_1652602_4 TIGRFAM Outer membrane assembly lipoprotein YfiO K05807 - - 0.00000000001074 70.0
SYD3_k127_1652602_5 LysM domain - - - 0.00000000004285 74.0
SYD3_k127_1652602_6 protein domain associated with - - - 0.00008374 51.0
SYD3_k127_1652602_7 sequence-specific DNA binding K03557,K07712 GO:0000018,GO:0000229,GO:0000785,GO:0000786,GO:0000787,GO:0000789,GO:0000976,GO:0000984,GO:0000985,GO:0001017,GO:0001046,GO:0001047,GO:0001067,GO:0001121,GO:0001130,GO:0001131,GO:0001140,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008301,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016032,GO:0016070,GO:0018130,GO:0019042,GO:0019045,GO:0019046,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031421,GO:0032359,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044374,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044444,GO:0044446,GO:0044464,GO:0044815,GO:0045892,GO:0045893,GO:0045911,GO:0045934,GO:0045935,GO:0046483,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051704,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.0008692 46.0
SYD3_k127_1668543_0 PFAM Mo-co oxidoreductase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 554.0
SYD3_k127_1668543_1 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 464.0
SYD3_k127_1668543_10 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000002428 176.0
SYD3_k127_1668543_11 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000002284 134.0
SYD3_k127_1668543_12 - - - - 0.00000000000000000004149 92.0
SYD3_k127_1668543_13 4Fe-4S single cluster domain of Ferredoxin I - - - 0.00000000000001544 79.0
SYD3_k127_1668543_15 Protein conserved in bacteria - - - 0.00001346 56.0
SYD3_k127_1668543_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009825 470.0
SYD3_k127_1668543_3 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 419.0
SYD3_k127_1668543_4 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 393.0
SYD3_k127_1668543_5 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004197 309.0
SYD3_k127_1668543_6 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0036094,GO:0042866,GO:0043436,GO:0043891,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001841 280.0
SYD3_k127_1668543_7 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000000000000000000000000000000000000000000003952 226.0
SYD3_k127_1668543_8 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000008113 194.0
SYD3_k127_1668543_9 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000003373 170.0
SYD3_k127_1681201_0 phosphorelay signal transduction system K02481,K07713,K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005917 355.0
SYD3_k127_1681201_1 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000005584 228.0
SYD3_k127_1681201_10 S4 RNA-binding domain K04762 - - 0.000000000000008188 83.0
SYD3_k127_1681201_11 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000001554 86.0
SYD3_k127_1681201_12 STAS domain K04749 - - 0.000000000000017 78.0
SYD3_k127_1681201_13 Extracellular solute-binding protein K02027 - - 0.00000000000122 69.0
SYD3_k127_1681201_14 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.0000000005351 68.0
SYD3_k127_1681201_2 Belongs to the Dps family K03594 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000000000001071 214.0
SYD3_k127_1681201_3 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000002925 214.0
SYD3_k127_1681201_4 metallopeptidase activity K01993,K13408,K16922 - - 0.000000000000000000000000000000000000000000000000000000000009295 233.0
SYD3_k127_1681201_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993,K16922 - - 0.000000000000000000000000000000000000000001606 179.0
SYD3_k127_1681201_6 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000001627 119.0
SYD3_k127_1681201_7 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000003999 123.0
SYD3_k127_1681201_8 DNA-sulfur modification-associated - - - 0.000000000000000000006658 105.0
SYD3_k127_1681201_9 - - - - 0.000000000000000008812 89.0
SYD3_k127_1730411_0 PhoH-like protein K06217 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005984 364.0
SYD3_k127_1730411_1 7TM-HD extracellular K07037 - - 0.00000007761 64.0
SYD3_k127_1761947_0 B12 binding domain K00548 - 2.1.1.13 9.672e-264 831.0
SYD3_k127_1761947_1 Male sterility protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 326.0
SYD3_k127_1761947_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007753 311.0
SYD3_k127_1782737_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005936 544.0
SYD3_k127_1782737_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 372.0
SYD3_k127_1782737_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 336.0
SYD3_k127_1782737_3 MatE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 293.0
SYD3_k127_1782737_4 NUDIX domain - - - 0.00000000000000000000000000006319 123.0
SYD3_k127_1782737_5 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000001056 129.0
SYD3_k127_1786289_0 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 4.495e-203 651.0
SYD3_k127_1786289_1 quinone binding K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 358.0
SYD3_k127_1786289_2 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004716 323.0
SYD3_k127_1786289_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009823 269.0
SYD3_k127_1786289_4 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.00000000000000000000000000000000000002256 151.0
SYD3_k127_1786289_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000001092 99.0
SYD3_k127_1786289_6 Belongs to the complex I subunit 6 family K00339 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.00000000009802 74.0
SYD3_k127_1816750_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 510.0
SYD3_k127_1816750_1 PFAM Type II secretion system protein E K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 317.0
SYD3_k127_1816750_2 N-Acetylmuramoyl-L-alanine amidase K01448,K02172 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001528 309.0
SYD3_k127_1816750_3 PFAM peptidase M24 K01262,K01271,K01274 - 3.4.11.9,3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000002971 242.0
SYD3_k127_1816750_4 Probable RNA and SrmB- binding site of polymerase A K00970 - 2.7.7.19 0.000000000000000000000000000000713 139.0
SYD3_k127_1816750_5 peptidyl-tyrosine sulfation - - - 0.00000000000000000624 92.0
SYD3_k127_1816750_6 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00006317 55.0
SYD3_k127_1914860_0 Peptidase family M13 K07386 - - 9.155e-203 655.0
SYD3_k127_1914860_1 Radical SAM superfamily - - - 0.0000000000000000000000000000000000007748 158.0
SYD3_k127_1914860_2 Iron-sulfur cluster-binding domain - - - 0.000000000000000000009809 104.0
SYD3_k127_1914860_3 Glycosyltransferase like family 2 - - - 0.00000000000014 82.0
SYD3_k127_1914860_4 methyltransferase K00568 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016020,GO:0016740,GO:0016741,GO:0032259,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 2.1.1.222,2.1.1.64 0.00001909 53.0
SYD3_k127_1976191_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 7.335e-275 863.0
SYD3_k127_1976191_1 Transglycosylase K05366 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0008955,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042546,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005886 532.0
SYD3_k127_1976191_10 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000001139 86.0
SYD3_k127_1976191_11 Domain of unknown function (DUF4388) - - - 0.000000000001506 81.0
SYD3_k127_1976191_15 DnaJ molecular chaperone homology domain K09524 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0006457,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0016020,GO:0035966,GO:0042221,GO:0050896,GO:0051082 - 0.0006876 51.0
SYD3_k127_1976191_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004768 498.0
SYD3_k127_1976191_3 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 430.0
SYD3_k127_1976191_4 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000004928 176.0
SYD3_k127_1976191_5 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000001417 146.0
SYD3_k127_1976191_6 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000008121 133.0
SYD3_k127_1976191_7 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000007802 104.0
SYD3_k127_1976191_8 Domain of unknown function (DUF4388) - - - 0.0000000000000000004101 100.0
SYD3_k127_1976191_9 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000005683 93.0
SYD3_k127_1996113_0 electron transfer activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007874 576.0
SYD3_k127_1996113_1 Apoptosis-inducing factor, mitochondrion-associated, C-term - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 487.0
SYD3_k127_1996113_2 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000006859 217.0
SYD3_k127_1996113_3 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000001526 216.0
SYD3_k127_1996113_4 GTP cyclohydrolase I K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000147 168.0
SYD3_k127_2060326_0 Citrate transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005112 480.0
SYD3_k127_2060326_1 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 290.0
SYD3_k127_2060326_2 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000153 285.0
SYD3_k127_2060326_3 mannose-ethanolamine phosphotransferase activity K01077 GO:0003674,GO:0003824,GO:0004035,GO:0004346,GO:0005488,GO:0005575,GO:0005623,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008877,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0046872,GO:0046914,GO:0050308,GO:0050309,GO:0098519 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000002114 241.0
SYD3_k127_2060326_4 Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000001462 135.0
SYD3_k127_2060326_5 Secondary thiamine-phosphate synthase enzyme - - - 0.0000000000000000000000000003962 117.0
SYD3_k127_2098777_0 Protein kinase domain K12132 - 2.7.11.1 7.013e-194 637.0
SYD3_k127_2098777_1 DNA-templated transcription, initiation K03088 - - 0.0004452 51.0
SYD3_k127_2123283_0 phosphohydrolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 317.0
SYD3_k127_2123283_1 Diacylglycerol kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005412 275.0
SYD3_k127_2123283_2 Trypsin-like serine protease - - - 0.0000000000000000000000000000000000000000005798 176.0
SYD3_k127_2123283_3 Belongs to the peptidase S8 family - - - 0.0000000000000001782 86.0
SYD3_k127_2124848_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 383.0
SYD3_k127_2124848_1 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005639 301.0
SYD3_k127_2124848_2 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000004037 253.0
SYD3_k127_2124848_3 Carbon-nitrogen hydrolase K03820 - - 0.0000000000000000000000000000000000000000000000000001447 203.0
SYD3_k127_2124848_4 NUDIX domain - - - 0.00000000000000000000000000000000000000002004 160.0
SYD3_k127_2124848_5 Tetratricopeptide repeats - - - 0.0000000001109 74.0
SYD3_k127_2126896_0 PFAM amidohydrolase K01464 - 3.5.2.2 1.335e-200 642.0
SYD3_k127_2126896_1 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 563.0
SYD3_k127_2126896_2 Carbon-nitrogen hydrolase K01431,K12251 - 3.5.1.53,3.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 511.0
SYD3_k127_2126896_3 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 376.0
SYD3_k127_2126896_4 Dihydroorotate dehydrogenase K17723 GO:0003674,GO:0003824,GO:0003954,GO:0006139,GO:0006206,GO:0006208,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016491,GO:0016651,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 1.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006433 390.0
SYD3_k127_2126896_5 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009587 343.0
SYD3_k127_2126896_6 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000008694 250.0
SYD3_k127_2126896_7 Amidohydrolase family K01464 - 3.5.2.2 0.0000001576 56.0
SYD3_k127_2135626_0 Cys/Met metabolism PLP-dependent enzyme K01739,K01760,K01761 - 2.5.1.48,4.4.1.11,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 529.0
SYD3_k127_2135626_1 MatE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007222 339.0
SYD3_k127_2135626_2 Bacterial regulatory proteins, tetR family K16137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000066 250.0
SYD3_k127_2135626_3 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000006314 229.0
SYD3_k127_2211943_0 Permease, YjgP YjgQ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000487 361.0
SYD3_k127_2211943_1 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006062 259.0
SYD3_k127_2211943_2 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000001292 224.0
SYD3_k127_2211943_3 chromosome segregation K03497 - - 0.00000000000000000000000000000000000000000000000000001359 201.0
SYD3_k127_2211943_4 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.000000000000000000000000000000000000000000006963 164.0
SYD3_k127_2211943_5 involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000000000002045 145.0
SYD3_k127_2211943_6 Uncharacterized ACR, COG1993 K09137 - - 0.000000000000000000000000000000000003239 140.0
SYD3_k127_2211943_7 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.000000000000000000000000000000001949 133.0
SYD3_k127_2211943_8 Alkylmercury lyase - - - 0.0000000000000000003228 94.0
SYD3_k127_2211943_9 Alkylmercury lyase - - - 0.000000001482 61.0
SYD3_k127_2252696_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 414.0
SYD3_k127_2252696_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008529 366.0
SYD3_k127_2252696_2 Domain present in PSD-95, Dlg, and ZO-1/2. K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005547 336.0
SYD3_k127_2252696_3 PFAM EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000008076 183.0
SYD3_k127_2252696_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000002515 149.0
SYD3_k127_2260644_0 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008262 526.0
SYD3_k127_2260644_1 radical SAM domain protein K04070 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 364.0
SYD3_k127_2260644_10 Mannosyltransferase (PIG-V) - - - 0.0000000000000000000000000321 122.0
SYD3_k127_2260644_2 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 373.0
SYD3_k127_2260644_3 Hep Hag repeat protein K21449 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001822 288.0
SYD3_k127_2260644_4 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000005673 250.0
SYD3_k127_2260644_5 DNA ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000005713 230.0
SYD3_k127_2260644_6 DNA polymerase LigD polymerase domain K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000008632 209.0
SYD3_k127_2260644_7 methyltransferase activity - - - 0.00000000000000000000000000000000000000000000173 175.0
SYD3_k127_2260644_8 Uncharacterized membrane protein (DUF2298) - - - 0.000000000000000000000000000000000000003288 166.0
SYD3_k127_2472555_0 COG0798 Arsenite efflux pump ACR3 and related K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 484.0
SYD3_k127_2472555_1 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 372.0
SYD3_k127_2472555_2 Binding-protein-dependent transport system inner membrane component K02018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001321 282.0
SYD3_k127_2472555_3 - - - - 0.000000000000000000000000000000000000000000000000000000000001758 229.0
SYD3_k127_2472555_4 Bacterial extracellular solute-binding protein K02020 - - 0.000000000000000000000000000000000000000000000000000000000008714 215.0
SYD3_k127_2472555_5 Transcriptional regulator K02019 - - 0.00000000000000000000000007145 111.0
SYD3_k127_2472555_6 DNA-binding transcription factor activity K03892,K21903 - - 0.0000000000000000008066 91.0
SYD3_k127_2472555_7 Oxidoreductase molybdopterin binding domain - - - 0.0000001693 59.0
SYD3_k127_2472555_8 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.0000168 52.0
SYD3_k127_256410_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005677 454.0
SYD3_k127_256410_1 PFAM peptidase U32 K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003 322.0
SYD3_k127_256410_2 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.000000000000000000000000000000000000000000003462 173.0
SYD3_k127_256410_3 peptidase U32 K08303 - - 0.0000000000000000000000000000009128 126.0
SYD3_k127_2647893_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 370.0
SYD3_k127_2647893_1 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000003592 237.0
SYD3_k127_2647893_2 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000003016 159.0
SYD3_k127_2647893_3 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.000000000000000000000000000000002256 136.0
SYD3_k127_2647893_4 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.00000000000000000000000006103 115.0
SYD3_k127_2647893_5 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000002234 105.0
SYD3_k127_2647893_6 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000004177 94.0
SYD3_k127_2647893_7 glycosyl hydrolase, BNR repeat-containing protein - - - 0.000000000000000009027 91.0
SYD3_k127_2678536_0 PFAM glycosyl hydrolase BNR repeat-containing protein - - - 0.0 1146.0
SYD3_k127_2678536_1 tRNA synthetases class I (K) K01870 - 6.1.1.5 7.503e-285 908.0
SYD3_k127_2678536_10 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000001732 104.0
SYD3_k127_2678536_11 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.0004395 45.0
SYD3_k127_2678536_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008775 376.0
SYD3_k127_2678536_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 324.0
SYD3_k127_2678536_4 abc transporter atp-binding protein K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003915 318.0
SYD3_k127_2678536_5 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000001425 287.0
SYD3_k127_2678536_6 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000003139 237.0
SYD3_k127_2678536_7 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000001047 235.0
SYD3_k127_2678536_8 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000008543 230.0
SYD3_k127_2678536_9 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000008188 138.0
SYD3_k127_2703291_0 Peptidase, M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005661 588.0
SYD3_k127_2703291_1 D-aminoacylase domain protein K01465,K06015 - 3.5.1.81,3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 523.0
SYD3_k127_2703291_10 thyroxine 5'-deiodinase activity K01562 GO:0003674,GO:0003824,GO:0004800,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006575,GO:0006590,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008430,GO:0009987,GO:0010817,GO:0016020,GO:0016491,GO:0018958,GO:0042403,GO:0042445,GO:0044237,GO:0044464,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0071944,GO:1901360,GO:1901564,GO:1901615 1.21.99.4 0.0000000000000000000000000002286 119.0
SYD3_k127_2703291_11 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000001126 109.0
SYD3_k127_2703291_12 Iodothyronine deiodinase - - - 0.0001545 47.0
SYD3_k127_2703291_2 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006953 396.0
SYD3_k127_2703291_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 395.0
SYD3_k127_2703291_4 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003723 294.0
SYD3_k127_2703291_5 Peptidase dimerisation domain K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000002285 268.0
SYD3_k127_2703291_6 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000005254 240.0
SYD3_k127_2703291_7 Trypsin-like serine protease - - - 0.0000000000000000000000000000000000000000000000000000000000003492 230.0
SYD3_k127_2703291_8 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000009702 160.0
SYD3_k127_2703291_9 Lipid A Biosynthesis N-terminal domain - - - 0.00000000000000000000000000000000002338 137.0
SYD3_k127_2732985_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000443 305.0
SYD3_k127_2732985_1 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003729 291.0
SYD3_k127_2732985_2 Deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000000000000000002206 235.0
SYD3_k127_2732985_3 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000287 157.0
SYD3_k127_2732985_4 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000002053 82.0
SYD3_k127_2732985_5 photosystem II stabilization K00703,K02237,K02238 - 2.4.1.21 0.000000000000004663 85.0
SYD3_k127_2811161_0 Prolyl oligopeptidase family - - - 1.554e-256 810.0
SYD3_k127_2811161_1 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 304.0
SYD3_k127_2811161_2 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002295 249.0
SYD3_k127_2811161_3 Polymorphic membrane protein Chlamydia - - - 0.000000000000000000000000000000000000000000000000000003202 216.0
SYD3_k127_2811161_4 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000006781 140.0
SYD3_k127_2811161_5 domain protein - - - 0.000000000000000001274 101.0
SYD3_k127_2811161_6 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000002547 74.0
SYD3_k127_2811161_7 DinB superfamily - - - 0.000000004038 64.0
SYD3_k127_2818381_0 DNA-directed DNA polymerase K02337 - 2.7.7.7 1.769e-315 1004.0
SYD3_k127_2818381_1 tRNA nucleotidyltransferase poly(A) polymerase K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000002643 201.0
SYD3_k127_2818381_2 amino acid transport K03294 - - 0.0000000000000000000000000000000000000000001449 168.0
SYD3_k127_2823154_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001471 278.0
SYD3_k127_2823154_1 Peptidase M50 - - - 0.00000000000000000000000000000000000000000000000001129 191.0
SYD3_k127_2823154_2 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000004982 168.0
SYD3_k127_2823154_3 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000000000000001421 156.0
SYD3_k127_2823154_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000001055 136.0
SYD3_k127_2823154_5 bacterial (prokaryotic) histone like domain K03530 - - 0.00000000000000000000000000162 116.0
SYD3_k127_2823154_6 Tetratricopeptide TPR_2 repeat protein - - - 0.00001505 57.0
SYD3_k127_2824357_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004651 565.0
SYD3_k127_2824357_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 332.0
SYD3_k127_2824357_2 Uncharacterized protein conserved in bacteria (DUF2155) - - - 0.0000000000000000003831 100.0
SYD3_k127_2824357_3 MerR family transcriptional regulator - - - 0.0000000000002769 83.0
SYD3_k127_2831244_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 1.09e-208 666.0
SYD3_k127_2831244_1 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 534.0
SYD3_k127_2831244_10 Protein of unknown function (DUF3108) - - - 0.000000000000000000002618 108.0
SYD3_k127_2831244_2 Type II secretion system (T2SS), protein F K02455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 449.0
SYD3_k127_2831244_3 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000002644 262.0
SYD3_k127_2831244_4 Sensor histidine kinase PilS, PAS domain-containing K02668,K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000001287 269.0
SYD3_k127_2831244_5 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000001171 226.0
SYD3_k127_2831244_6 D,D-heptose 1,7-bisphosphate phosphatase K02841,K02843,K02849,K03271,K03272,K03273 - 2.7.1.167,2.7.7.70,3.1.3.82,3.1.3.83,5.3.1.28 0.0000000000000000000000000000000000000000000001053 183.0
SYD3_k127_2831244_7 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.0000000000000000000000000000000000000000000009965 176.0
SYD3_k127_2831244_8 PFAM glycosyl transferase family 9 K02841 - - 0.00000000000000000000000000000000000000002489 165.0
SYD3_k127_2831244_9 sigma-54 factor interaction domain-containing protein K02667 - - 0.00000000000000000000000001531 119.0
SYD3_k127_2841986_0 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009819 480.0
SYD3_k127_2841986_1 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007759 337.0
SYD3_k127_2841986_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008384 310.0
SYD3_k127_2841986_3 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002328 297.0
SYD3_k127_2841986_4 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000002738 205.0
SYD3_k127_2841986_5 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000003299 180.0
SYD3_k127_2841986_6 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I - - - 0.0000000000000000000000000000000000000000000002028 178.0
SYD3_k127_2841986_7 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000004562 161.0
SYD3_k127_2841986_8 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000001537 89.0
SYD3_k127_2868264_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000638 559.0
SYD3_k127_2868264_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 438.0
SYD3_k127_2868264_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 312.0
SYD3_k127_2868264_3 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002055 284.0
SYD3_k127_2868264_4 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004814 267.0
SYD3_k127_2868264_5 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000114 117.0
SYD3_k127_2868264_6 Psort location Cytoplasmic, score 8.87 K06346 - - 0.00000000000000000000711 102.0
SYD3_k127_2868264_7 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000004099 98.0
SYD3_k127_2868264_8 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000001178 83.0
SYD3_k127_2868264_9 Ribosomal protein L34 K02914 - - 0.00000000000003656 73.0
SYD3_k127_2887847_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 535.0
SYD3_k127_2887847_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007697 435.0
SYD3_k127_2892269_0 AAA ATPase domain - - - 0.0 1081.0
SYD3_k127_2892269_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008783 562.0
SYD3_k127_2892269_10 Stage II sporulation protein K06381 - - 0.000000000000000000000000000000000000000000000003124 197.0
SYD3_k127_2892269_11 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.000000000000000000000000000000000001491 147.0
SYD3_k127_2892269_12 - - - - 0.00000000000000000736 88.0
SYD3_k127_2892269_13 AAA ATPase domain - - - 0.00000000000002997 81.0
SYD3_k127_2892269_14 FHA domain containing protein - GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944,GO:0097159,GO:1901363 - 0.0000000000132 73.0
SYD3_k127_2892269_15 Protein kinase domain K12132 - 2.7.11.1 0.00000000006873 74.0
SYD3_k127_2892269_2 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 503.0
SYD3_k127_2892269_3 NeuB family K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005063 449.0
SYD3_k127_2892269_4 beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 366.0
SYD3_k127_2892269_5 Belongs to the CarA family K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 355.0
SYD3_k127_2892269_6 LAO AO transport system K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 320.0
SYD3_k127_2892269_7 IstB-like ATP binding protein K02315,K04076 - 3.4.21.53 0.000000000000000000000000000000000000000000000000004739 190.0
SYD3_k127_2892269_8 MacB-like periplasmic core domain K09808 - - 0.000000000000000000000000000000000000000000000000006294 198.0
SYD3_k127_2892269_9 Mannose-6-phosphate isomerase - - - 0.00000000000000000000000000000000000000000000000001941 183.0
SYD3_k127_2972439_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688,K18786 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.321 0.0 2528.0
SYD3_k127_2972439_1 Amidohydrolase family - - - 0.0 1475.0
SYD3_k127_2972439_10 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00003057 56.0
SYD3_k127_2972439_2 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 484.0
SYD3_k127_2972439_3 PFAM Glucose Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005146 405.0
SYD3_k127_2972439_4 Binding-protein-dependent transport system inner membrane component K02011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 400.0
SYD3_k127_2972439_5 Iron ABC transporter substrate-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 298.0
SYD3_k127_2972439_6 Belongs to the ABC transporter superfamily K02010,K02052 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007728 292.0
SYD3_k127_2972439_7 glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.0000000000000000000000000000000000000000000000000000000000004977 213.0
SYD3_k127_2972439_8 - - - - 0.000000000000000000000000000000004085 148.0
SYD3_k127_2972439_9 Putative cyclase - - - 0.00000000000008636 71.0
SYD3_k127_2994885_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 387.0
SYD3_k127_2994885_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 322.0
SYD3_k127_2994885_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000005703 215.0
SYD3_k127_2994885_3 - - - - 0.00000000000000000000000000000000000000146 152.0
SYD3_k127_2994885_4 ABC transporter K01990 - - 0.000000000000000000003689 100.0
SYD3_k127_300592_0 4Fe-4S single cluster domain K06937 - - 5.867e-253 795.0
SYD3_k127_300592_1 GTP-binding protein TypA K06207 - - 7.613e-198 637.0
SYD3_k127_300592_2 COG0023 Translation initiation factor 1 (eIF-1 SUI1) and related K03113 - - 0.0000000000000000003175 94.0
SYD3_k127_300592_3 Glycine oxidase K03153 - 1.4.3.19 0.0001211 45.0
SYD3_k127_3006568_0 Bacterial protein of unknown function (DUF885) - - - 9.228e-235 740.0
SYD3_k127_3006568_1 Carboxypeptidase regulatory-like domain K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005042 308.0
SYD3_k127_3006568_2 - - - - 0.00000000000000000000000000000000000000000000005314 190.0
SYD3_k127_3006568_3 Protein of unknown function (DUF1203) - - - 0.000000000002051 69.0
SYD3_k127_3076569_0 SNARE associated Golgi protein K03975,K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000006313 252.0
SYD3_k127_3076569_1 Amino-transferase class IV K00824,K00826 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009987,GO:0016053,GO:0016054,GO:0016740,GO:0016769,GO:0019478,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0046416,GO:0046437,GO:0047810,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 2.6.1.21,2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000003395 244.0
SYD3_k127_3076569_2 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000005967 194.0
SYD3_k127_3076569_3 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.00000000000000000000000000001864 127.0
SYD3_k127_3076569_4 Peptidase family M28 - - - 0.000000000000000001559 88.0
SYD3_k127_3076569_5 Tellurite resistance protein TerB - - - 0.00000000000000002977 87.0
SYD3_k127_3076569_6 DinB superfamily - - - 0.0000000000001941 79.0
SYD3_k127_3131397_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007152 540.0
SYD3_k127_3131397_1 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 409.0
SYD3_k127_3131397_10 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000001286 195.0
SYD3_k127_3131397_11 Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000005763 201.0
SYD3_k127_3131397_12 endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000004114 146.0
SYD3_k127_3131397_13 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000003743 136.0
SYD3_k127_3131397_14 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000007615 139.0
SYD3_k127_3131397_15 peroxiredoxin activity K00627,K01607 - 2.3.1.12,4.1.1.44 0.00000000000000000000008955 111.0
SYD3_k127_3131397_16 Methyltransferase domain - - - 0.0000000000000000000006186 104.0
SYD3_k127_3131397_17 Putative Fe-S cluster K00380 - 1.8.1.2 0.000000000000000001979 94.0
SYD3_k127_3131397_18 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000006077 85.0
SYD3_k127_3131397_2 Belongs to the ClpA ClpB family K03696 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 397.0
SYD3_k127_3131397_3 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003462 322.0
SYD3_k127_3131397_4 Threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005179 307.0
SYD3_k127_3131397_5 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 294.0
SYD3_k127_3131397_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007128 300.0
SYD3_k127_3131397_7 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000005372 230.0
SYD3_k127_3131397_8 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000003193 226.0
SYD3_k127_3131397_9 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000006841 232.0
SYD3_k127_3187241_0 AcrB/AcrD/AcrF family - - - 0.0 1080.0
SYD3_k127_3187241_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1008.0
SYD3_k127_3187241_10 ABC-type sugar transport system, permease component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 328.0
SYD3_k127_3187241_11 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002841 292.0
SYD3_k127_3187241_12 Ferritin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005312 270.0
SYD3_k127_3187241_13 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003525 270.0
SYD3_k127_3187241_14 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001477 250.0
SYD3_k127_3187241_15 Protein of unknown function (DUF2400) K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000008098 218.0
SYD3_k127_3187241_16 bacterial OsmY and nodulation domain - - - 0.000000000000000000000000000000000000000000000000000007887 199.0
SYD3_k127_3187241_17 Universal stress protein family - - - 0.00000000000000000000000000000000006934 141.0
SYD3_k127_3187241_18 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000001367 113.0
SYD3_k127_3187241_19 Thioredoxin-like - - - 0.000000000000000000000007846 113.0
SYD3_k127_3187241_2 coagulation factor 5 8 type - - - 4.053e-288 930.0
SYD3_k127_3187241_20 hyperosmotic response - - - 0.00000000000000000000001057 113.0
SYD3_k127_3187241_21 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000001059 106.0
SYD3_k127_3187241_22 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.000000000000000002208 94.0
SYD3_k127_3187241_23 Sulfurtransferase - - - 0.0000000000000001411 91.0
SYD3_k127_3187241_3 COG2723 Beta-glucosidase 6-phospho-beta-glucosidase beta- galactosidase K05350 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003401 605.0
SYD3_k127_3187241_4 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006211 599.0
SYD3_k127_3187241_5 Outer membrane receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 596.0
SYD3_k127_3187241_6 glycosyl hydrolase, BNR repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 505.0
SYD3_k127_3187241_7 ABC transporter substrate-binding protein K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000091 440.0
SYD3_k127_3187241_8 transmembrane transport K02025,K15771 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004625 359.0
SYD3_k127_3187241_9 LacI family K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 349.0
SYD3_k127_3198926_0 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000007629 106.0
SYD3_k127_3198926_1 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.00000000000000001048 93.0
SYD3_k127_3198926_2 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00000000000476 72.0
SYD3_k127_3198926_3 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity K02372 - 4.2.1.59 0.00008589 53.0
SYD3_k127_323508_0 L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp K01876 - 6.1.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 591.0
SYD3_k127_323508_1 PFAM tRNA synthetase, class II (G, H, P and S) K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006032 377.0
SYD3_k127_323508_10 Gram-negative bacterial TonB protein C-terminal - - - 0.000000000002121 78.0
SYD3_k127_323508_2 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003326 368.0
SYD3_k127_323508_3 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001341 287.0
SYD3_k127_323508_4 MoeZ MoeB K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000002284 267.0
SYD3_k127_323508_5 maltose O-acetyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000003775 223.0
SYD3_k127_323508_6 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000004089 228.0
SYD3_k127_323508_7 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 GO:0000166,GO:0003674,GO:0003824,GO:0003856,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046417,GO:0046872,GO:0046914,GO:0048037,GO:0050662,GO:0051287,GO:0070403,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.4 0.000000000000000000000000000000000000000000000000000000002691 216.0
SYD3_k127_323508_8 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000006826 166.0
SYD3_k127_323508_9 Telomere recombination K07566 - 2.7.7.87 0.000000000000000000000000000003234 127.0
SYD3_k127_3251088_0 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 412.0
SYD3_k127_3251088_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000555 316.0
SYD3_k127_3251088_2 Late embryogenesis abundant protein - - - 0.0000000000000000000000009852 112.0
SYD3_k127_3251088_3 2 iron, 2 sulfur cluster binding - - - 0.00002848 47.0
SYD3_k127_3261490_0 GDP-mannose 4,6 dehydratase K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 389.0
SYD3_k127_3261490_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02472 - 1.1.1.336 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 349.0
SYD3_k127_3261490_2 Male sterility protein K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000005363 252.0
SYD3_k127_3261490_3 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.0000000000000000001504 103.0
SYD3_k127_3261490_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000004884 90.0
SYD3_k127_3326185_0 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 385.0
SYD3_k127_3326185_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000003867 277.0
SYD3_k127_3326185_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000001518 202.0
SYD3_k127_3326185_3 Methenyltetrahydrofolate cyclohydrolase - - - 0.000000000000000000000000000000006721 137.0
SYD3_k127_3326185_4 DivIVA protein K04074 - - 0.0000000000000000006505 93.0
SYD3_k127_3326185_5 integral membrane protein K02221 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000146 91.0
SYD3_k127_3339147_0 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 409.0
SYD3_k127_3339147_1 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 422.0
SYD3_k127_3339147_2 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000008906 189.0
SYD3_k127_3360473_0 Catalyzes the conversion of 1-proline-5-carboxylate dehydrogenase to L-glutamate K00294 - 1.2.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 435.0
SYD3_k127_3360473_1 Pyridoxal-phosphate dependent enzyme K12339 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005489 375.0
SYD3_k127_3360473_2 Amino acid permease K20265 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 327.0
SYD3_k127_3360473_3 proteolysis - - - 0.000000000000000000000000001329 126.0
SYD3_k127_3360473_4 Methyltransferase domain - - - 0.00000000000000002368 91.0
SYD3_k127_3360473_5 - - - - 0.0000008884 62.0
SYD3_k127_3376459_0 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 0.0 1069.0
SYD3_k127_3376459_1 Pyruvate ferredoxin oxidoreductase and related K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007888 428.0
SYD3_k127_3376459_10 thiolester hydrolase activity K06889 - - 0.00000000000000000000000000000000000000000000004215 184.0
SYD3_k127_3376459_11 Protein of unknown function (DUF3224) - - - 0.000000000000000000000000000000000000000009853 161.0
SYD3_k127_3376459_12 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000009552 156.0
SYD3_k127_3376459_13 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000003884 162.0
SYD3_k127_3376459_14 Protein of unknown function (DUF2834) - - - 0.0000000000000000000000000000007167 132.0
SYD3_k127_3376459_15 - - - - 0.0000000000000000000003225 102.0
SYD3_k127_3376459_16 Metallo-beta-lactamase superfamily - - - 0.000000000000000000002464 106.0
SYD3_k127_3376459_17 lactoylglutathione lyase activity - - - 0.00000000000000001867 84.0
SYD3_k127_3376459_18 methyltransferase activity - - - 0.0000000000001012 80.0
SYD3_k127_3376459_19 TIGRFAM RHS repeat-associated core domain - - - 0.000000005474 69.0
SYD3_k127_3376459_2 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 342.0
SYD3_k127_3376459_3 SAM (And some other nucleotide) binding motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 320.0
SYD3_k127_3376459_4 TIGRFAM 2-oxoacid acceptor oxidoreductase, beta subunit, pyruvate 2-ketoisovalerate family K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 296.0
SYD3_k127_3376459_5 MOSC N-terminal beta barrel domain K07140 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003423 280.0
SYD3_k127_3376459_6 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000004369 251.0
SYD3_k127_3376459_7 PFAM Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000000000000000000000006712 228.0
SYD3_k127_3376459_8 Protein of unknown function (DUF1572) - - - 0.00000000000000000000000000000000000000000000000000000000006118 217.0
SYD3_k127_3376459_9 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000001758 205.0
SYD3_k127_3422060_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.775e-253 800.0
SYD3_k127_3422060_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 1.095e-201 648.0
SYD3_k127_3422060_10 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000006353 128.0
SYD3_k127_3422060_11 membrane-bound metal-dependent K07038 - - 0.000000000000000000000000006493 123.0
SYD3_k127_3422060_12 YbbR-like protein - - - 0.0000000000000000000001906 106.0
SYD3_k127_3422060_13 cheY-homologous receiver domain - - - 0.0000000000003992 72.0
SYD3_k127_3422060_2 PFAM FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 604.0
SYD3_k127_3422060_3 PFAM Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008366 507.0
SYD3_k127_3422060_4 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005185 343.0
SYD3_k127_3422060_5 COG0840 Methyl-accepting chemotaxis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002159 286.0
SYD3_k127_3422060_6 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000006751 252.0
SYD3_k127_3422060_7 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.000000000000000000000000000000000000000000000000000000163 217.0
SYD3_k127_3422060_8 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059,K07124 - 1.1.1.100 0.000000000000000000000000000000002825 138.0
SYD3_k127_3422060_9 DinB family - - - 0.000000000000000000000000000003876 132.0
SYD3_k127_3461022_0 PFAM Peptidase family M20 M25 M40 K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 336.0
SYD3_k127_3461022_1 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003283 267.0
SYD3_k127_3461022_2 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000005718 211.0
SYD3_k127_3461022_3 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.000000000000000000000000000001074 139.0
SYD3_k127_3461022_4 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000128 133.0
SYD3_k127_3461022_5 Uncharacterized conserved protein (DUF2203) - - - 0.0000000000000000000003545 110.0
SYD3_k127_3479361_0 Belongs to the aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 560.0
SYD3_k127_3479361_1 Dehydrogenase E1 component K00164 - 1.2.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 443.0
SYD3_k127_3479361_2 short-chain dehydrogenase K13774 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009073 291.0
SYD3_k127_3479361_3 Dioxygenase K03381 - 1.13.11.1 0.00000000000000000000000000000000000001649 151.0
SYD3_k127_3479361_4 - - - - 0.00000000000000000000000000000002764 139.0
SYD3_k127_3487859_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883,K15526 GO:0000166,GO:0001871,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010125,GO:0010126,GO:0010467,GO:0016020,GO:0016070,GO:0016137,GO:0016138,GO:0016874,GO:0016875,GO:0016879,GO:0016880,GO:0017076,GO:0019538,GO:0019752,GO:0030246,GO:0030247,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035446,GO:0035639,GO:0036094,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:2001065 6.1.1.16,6.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 421.0
SYD3_k127_3487859_1 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000007219 141.0
SYD3_k127_3487859_2 iron ion homeostasis - - - 0.0000000000000000000000000000008278 141.0
SYD3_k127_3503615_0 Acyl-CoA dehydrogenase, C-terminal domain K00252 - 1.3.8.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007271 532.0
SYD3_k127_3503615_1 Ornithine cyclodeaminase/mu-crystallin family K01750,K18258,K19244 - 1.4.1.1,1.5.1.25,4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 387.0
SYD3_k127_3503615_2 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 329.0
SYD3_k127_3503615_3 UDP-glucose 4-epimerase activity K01784,K17947 - 5.1.3.2,5.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003192 293.0
SYD3_k127_3503615_4 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000006427 173.0
SYD3_k127_3503615_5 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000505 149.0
SYD3_k127_3503615_6 Domain of unknown function (DUF296) K06934 - - 0.000000000000000007542 89.0
SYD3_k127_3503615_7 Yip1 domain - - - 0.0000000006087 70.0
SYD3_k127_3503615_8 outer membrane efflux protein - - - 0.000005702 51.0
SYD3_k127_351480_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 583.0
SYD3_k127_351480_1 Beta-Casp domain K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 453.0
SYD3_k127_351480_10 - - - - 0.00000000002355 71.0
SYD3_k127_351480_11 - - - - 0.00007875 48.0
SYD3_k127_351480_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007268 419.0
SYD3_k127_351480_3 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003951 413.0
SYD3_k127_351480_4 Family of unknown function (DUF1028) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 304.0
SYD3_k127_351480_5 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004133 299.0
SYD3_k127_351480_6 PFAM Sodium hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003695 269.0
SYD3_k127_351480_7 glycerone kinase activity K07030 - - 0.000000000000000000000000000000000000000000002636 170.0
SYD3_k127_351480_8 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000003018 152.0
SYD3_k127_351480_9 UPF0761 membrane protein K07058 - - 0.000000000000000004007 97.0
SYD3_k127_3524044_0 Prolyl oligopeptidase K01322 - 3.4.21.26 3.827e-210 676.0
SYD3_k127_3524044_1 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 371.0
SYD3_k127_3524044_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000519 204.0
SYD3_k127_3524044_3 PFAM flavin reductase domain protein, FMN-binding - - - 0.000000000000000000000000000000000000000003871 166.0
SYD3_k127_3524044_4 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000004821 117.0
SYD3_k127_3524044_5 - - - - 0.00000000000000000005276 100.0
SYD3_k127_3524044_6 Tetratricopeptide TPR_2 repeat protein - - - 0.0004692 52.0
SYD3_k127_3617393_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 576.0
SYD3_k127_3617393_1 Nucleotidyl transferase K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008858 421.0
SYD3_k127_3617393_2 desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 296.0
SYD3_k127_3617393_3 MafB19-like deaminase K01485 - 3.5.4.1 0.00000000000000000000000000000000000000000000000000000000000000003057 243.0
SYD3_k127_3617393_4 RNA recognition motif - - - 0.0000000000000000000000000007449 120.0
SYD3_k127_3617393_5 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000000001309 85.0
SYD3_k127_3624543_0 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003134 481.0
SYD3_k127_3624543_1 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 345.0
SYD3_k127_3624543_2 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 310.0
SYD3_k127_3624543_3 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000001274 196.0
SYD3_k127_3624543_4 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000001456 185.0
SYD3_k127_3624543_5 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.000000000000000000000000000000000000188 147.0
SYD3_k127_3624543_6 Methyltransferase domain - - - 0.000000000000000000000000000000002524 141.0
SYD3_k127_3624543_7 CoA-binding protein K06929 - - 0.00000000000000000000000000000004042 138.0
SYD3_k127_3624543_8 Bacterial membrane protein YfhO - - - 0.000000000001051 82.0
SYD3_k127_3624543_9 TonB C terminal K03832 - - 0.000000005865 67.0
SYD3_k127_362718_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000326 393.0
SYD3_k127_362718_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003509 302.0
SYD3_k127_362718_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001266 303.0
SYD3_k127_362718_3 Involved in the biosynthesis of porphyrin-containing compound - GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000008641 237.0
SYD3_k127_362718_4 Riboflavin synthase K00793 GO:0003674,GO:0003824,GO:0004746,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.9 0.0000000000000000000000000000000000000000000001173 177.0
SYD3_k127_362718_5 HD domain - - - 0.00000000000000000000000001583 111.0
SYD3_k127_362718_6 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000006813 74.0
SYD3_k127_3632183_0 Hydrolase CocE NonD family - - - 1.568e-315 977.0
SYD3_k127_3632183_1 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 2.402e-260 822.0
SYD3_k127_3632183_10 Belongs to the PstS family K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 419.0
SYD3_k127_3632183_11 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 386.0
SYD3_k127_3632183_12 DegT/DnrJ/EryC1/StrS aminotransferase family K10907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 389.0
SYD3_k127_3632183_13 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005816 378.0
SYD3_k127_3632183_14 Acetamidase/Formamidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007585 343.0
SYD3_k127_3632183_15 Domain of Unknown Function (DUF1259) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 323.0
SYD3_k127_3632183_16 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004214 313.0
SYD3_k127_3632183_17 phosphohydrolases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 323.0
SYD3_k127_3632183_18 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 333.0
SYD3_k127_3632183_19 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004571 296.0
SYD3_k127_3632183_2 Bacterial protein of unknown function (DUF885) - - - 1.958e-201 658.0
SYD3_k127_3632183_20 Phosphate transport system permease protein PstA K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000187 295.0
SYD3_k127_3632183_21 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001768 298.0
SYD3_k127_3632183_22 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001481 261.0
SYD3_k127_3632183_23 Diacylglycerol kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004259 261.0
SYD3_k127_3632183_24 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000001488 258.0
SYD3_k127_3632183_25 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000001012 244.0
SYD3_k127_3632183_26 Amino acid permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000154 250.0
SYD3_k127_3632183_27 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000001612 243.0
SYD3_k127_3632183_28 Belongs to the P(II) protein family K04751 - - 0.00000000000000000000000000000000000000000000000000000000005422 208.0
SYD3_k127_3632183_29 PFAM response regulator receiver K02483,K07658,K07668 - - 0.000000000000000000000000000000000000000000000000000000004434 207.0
SYD3_k127_3632183_3 Ammonium Transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 595.0
SYD3_k127_3632183_30 - - - - 0.00000000000000000000000000000000000000000000000000003176 205.0
SYD3_k127_3632183_31 Transcriptional regulatory protein, C terminal K02483,K07665 - - 0.00000000000000000000000000000000000000000000000008005 185.0
SYD3_k127_3632183_32 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000002071 193.0
SYD3_k127_3632183_33 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.00000000000000000000000000000000000000000000001664 191.0
SYD3_k127_3632183_34 Histidine kinase K11383 - 2.7.13.3 0.0000000000000000000000000000000000000000000002034 186.0
SYD3_k127_3632183_35 cytochrome - - - 0.0000000000000000000000000000000000000000000002841 173.0
SYD3_k127_3632183_36 OsmC-like protein K06889,K07397 - - 0.0000000000000000000000000000000000000000002171 168.0
SYD3_k127_3632183_37 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000007077 117.0
SYD3_k127_3632183_38 - - - - 0.00000000000000000000001207 113.0
SYD3_k127_3632183_39 - - - - 0.000000000000000000005145 104.0
SYD3_k127_3632183_4 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005174 587.0
SYD3_k127_3632183_40 membrane protein (DUF2127) - - - 0.00004097 56.0
SYD3_k127_3632183_43 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0001081 53.0
SYD3_k127_3632183_5 Amidohydrolase family K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 532.0
SYD3_k127_3632183_6 Creatinase/Prolidase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 520.0
SYD3_k127_3632183_7 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 533.0
SYD3_k127_3632183_8 COG2133 Glucose sorbosone dehydrogenases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 465.0
SYD3_k127_3632183_9 PFAM Protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 469.0
SYD3_k127_3677977_0 B12 binding domain - - - 1.083e-222 700.0
SYD3_k127_3677977_1 dna ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004817 431.0
SYD3_k127_3677977_2 - - - - 0.00000000000000000000000000000000000000000000000000000000001827 216.0
SYD3_k127_3694039_0 Involved in the tonB-independent uptake of proteins - - - 2.489e-222 717.0
SYD3_k127_3694039_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003217 277.0
SYD3_k127_3694039_2 PFAM amino acid permease-associated region K03294 - - 0.000000000000000000000000000000000000000000006573 171.0
SYD3_k127_3716351_0 Phospholipase D Transphosphatidylase K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003497 423.0
SYD3_k127_3716351_1 - K00262 - 1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008846 286.0
SYD3_k127_3716351_2 5'-nucleotidase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000229 247.0
SYD3_k127_3716351_3 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000001532 219.0
SYD3_k127_3716351_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000006392 214.0
SYD3_k127_3716351_5 - - - - 0.0000000000000000000000000000000000000000000000000007741 200.0
SYD3_k127_3716351_6 Low affinity iron permease - - - 0.00000000000000000000000000000000000000002192 157.0
SYD3_k127_3744754_0 4Fe-4S dicluster domain - - - 0.0 1042.0
SYD3_k127_3744754_1 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000555 251.0
SYD3_k127_3744754_2 TonB dependent receptor - - - 0.000000006053 64.0
SYD3_k127_3788641_0 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 419.0
SYD3_k127_3788641_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000684 361.0
SYD3_k127_3788641_2 deaminase K01493 - 3.5.4.12 0.00000000000000000000000000000000000000000000000000000003689 221.0
SYD3_k127_3788641_3 Transmembrane exosortase (Exosortase_EpsH) - - - 0.0000000000000000000000000002578 123.0
SYD3_k127_3788641_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP - - - 0.0000000000000000000000000005396 126.0
SYD3_k127_3788641_5 response regulator - - - 0.0000000000000000007247 95.0
SYD3_k127_3788641_6 Thioesterase-like superfamily K07107 - - 0.00000000000000001953 97.0
SYD3_k127_3788641_7 Glycine D-amino acid oxidase (deaminating) - - - 0.00000000000001213 73.0
SYD3_k127_3788641_8 Forkhead associated domain - - - 0.0006732 51.0
SYD3_k127_383550_0 Extracellular solute-binding protein K02027 - - 4.091e-194 614.0
SYD3_k127_383550_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 432.0
SYD3_k127_383550_2 formate dehydrogenase K00127,K08350 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006091,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009326,GO:0009987,GO:0015942,GO:0015944,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0020037,GO:0022900,GO:0031224,GO:0031226,GO:0032787,GO:0032991,GO:0033554,GO:0036397,GO:0043436,GO:0044237,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0050896,GO:0051716,GO:0052738,GO:0055114,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1902494 - 0.000000000000000000000000000001095 126.0
SYD3_k127_383550_3 protein involved in formate dehydrogenase formation K02380 - - 0.0000000000000000000000000001047 125.0
SYD3_k127_3850014_0 Aminotransferase K14267,K14287 - 2.6.1.17,2.6.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 482.0
SYD3_k127_3850014_1 Cys/Met metabolism PLP-dependent enzyme K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005555 439.0
SYD3_k127_3850014_2 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005815 383.0
SYD3_k127_3850014_3 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008411 267.0
SYD3_k127_3850014_4 Aldehyde dehydrogenase family K00294 - 1.2.1.88 0.0000000000000000000000000000000000000000000000000000000005585 204.0
SYD3_k127_3850014_5 cell septum assembly - - - 0.00000000000000000000000000000000000004603 155.0
SYD3_k127_3892166_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 8.029e-202 646.0
SYD3_k127_3892166_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030312,GO:0030554,GO:0031333,GO:0032271,GO:0032272,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043254,GO:0044087,GO:0044238,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051301,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 547.0
SYD3_k127_3892166_2 AAA-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 502.0
SYD3_k127_3892166_3 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 445.0
SYD3_k127_3892166_4 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009072 287.0
SYD3_k127_3892166_5 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000009852 256.0
SYD3_k127_3892166_6 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000001811 211.0
SYD3_k127_3940840_0 Alpha/beta hydrolase family K07020 - - 0.00000000000000000000000000000000000000000000000000000004458 200.0
SYD3_k127_3940840_1 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000005645 174.0
SYD3_k127_3940840_2 endonuclease III K01247 - 3.2.2.21 0.000000000000000000000000000000000000000001246 167.0
SYD3_k127_3940840_3 - - - - 0.0000000625 65.0
SYD3_k127_3940840_4 - - - - 0.00000217 51.0
SYD3_k127_3965134_0 Smr domain - - - 0.00000000000000000000002084 102.0
SYD3_k127_3965134_1 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 - - 0.000000000000000001182 98.0
SYD3_k127_3965134_2 OsmC-like protein - - - 0.000000001229 67.0
SYD3_k127_3965536_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 1.376e-275 865.0
SYD3_k127_3965536_1 Protein of unknown function (DUF3417) K00688 - 2.4.1.1 4.748e-196 638.0
SYD3_k127_3965536_10 Nucleotidyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000001455 209.0
SYD3_k127_3965536_11 MOSC domain - - - 0.000000000000000000000000000000000000000000000000000000004219 206.0
SYD3_k127_3965536_12 - - - - 0.00000000000000000000000000000001342 138.0
SYD3_k127_3965536_13 hydroperoxide reductase activity K01607 - 4.1.1.44 0.000000000000000000000000000001403 122.0
SYD3_k127_3965536_14 Protein of unknown function (DUF2384) - - - 0.000000000000000000000006851 110.0
SYD3_k127_3965536_15 PFAM RNP-1 like RNA-binding protein - - - 0.00000000000000000000002689 103.0
SYD3_k127_3965536_16 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.000000001933 68.0
SYD3_k127_3965536_2 Belongs to the glycosyl hydrolase 57 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 582.0
SYD3_k127_3965536_3 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003109 474.0
SYD3_k127_3965536_4 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 326.0
SYD3_k127_3965536_5 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 311.0
SYD3_k127_3965536_6 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006076 298.0
SYD3_k127_3965536_7 Oxidoreductase molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 287.0
SYD3_k127_3965536_8 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004026 311.0
SYD3_k127_3965536_9 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000007353 234.0
SYD3_k127_3976240_0 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006261 419.0
SYD3_k127_3976240_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 375.0
SYD3_k127_3976240_10 Sporulation initiation inhibitor protein Soj K03496 - - 0.00000000000000000002006 102.0
SYD3_k127_3976240_11 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.000000000000000001917 95.0
SYD3_k127_3976240_12 ABC transporter K06861 - - 0.00008509 44.0
SYD3_k127_3976240_2 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 357.0
SYD3_k127_3976240_3 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 313.0
SYD3_k127_3976240_4 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002808 288.0
SYD3_k127_3976240_5 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000007264 184.0
SYD3_k127_3976240_6 Mannose-6-phosphate isomerase - - - 0.0000000000000000000000000000000000003554 153.0
SYD3_k127_3976240_7 PFAM PTS system fructose subfamily IIA component K02793 - 2.7.1.191 0.0000000000000000000000000004343 119.0
SYD3_k127_3976240_8 phosphocarrier protein HPr K11189 - - 0.000000000000000000000004638 107.0
SYD3_k127_3976240_9 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.00000000000000000000000534 109.0
SYD3_k127_4051652_0 Protein kinase domain K12132 - 2.7.11.1 9.443e-254 810.0
SYD3_k127_4051652_1 Protein kinase domain K12132 - 2.7.11.1 1.808e-223 728.0
SYD3_k127_4051652_10 PFAM histidine triad (HIT) protein K19710 - 2.7.7.53 0.00000000000000000000000000000000000000000000003106 174.0
SYD3_k127_4051652_11 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.00000000000000000000000000000000000000000000004317 181.0
SYD3_k127_4051652_12 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.0000000000000000000000000000007701 128.0
SYD3_k127_4051652_13 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.00000000000000011 82.0
SYD3_k127_4051652_14 TM2 domain - - - 0.000008922 53.0
SYD3_k127_4051652_2 Ribosomal protein S1 K02945,K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005622 607.0
SYD3_k127_4051652_3 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616 485.0
SYD3_k127_4051652_4 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 420.0
SYD3_k127_4051652_5 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 356.0
SYD3_k127_4051652_6 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001445 291.0
SYD3_k127_4051652_7 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000192 239.0
SYD3_k127_4051652_8 Domain of unknown function (DUF1732) - - - 0.0000000000000000000000000000000000000000000000001997 189.0
SYD3_k127_4051652_9 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000001693 190.0
SYD3_k127_406270_0 Lamin Tail Domain K07004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 591.0
SYD3_k127_406270_1 protein secretion by the type I secretion system K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004949 343.0
SYD3_k127_406270_2 calcium- and calmodulin-responsive adenylate cyclase activity K07004 - - 0.0000000000000000000000000000000000000000000000007943 201.0
SYD3_k127_406270_3 methyltransferase - - - 0.000000000000000002529 88.0
SYD3_k127_414299_0 Pyrrolo-quinoline quinone K00114 - 1.1.2.8 2.299e-279 873.0
SYD3_k127_414299_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K13924 - 2.1.1.80,3.1.1.61 1.764e-261 846.0
SYD3_k127_414299_10 FRG - - - 0.00000007287 60.0
SYD3_k127_414299_2 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007518 440.0
SYD3_k127_414299_3 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008645 379.0
SYD3_k127_414299_4 PFAM extracellular solute-binding protein, family 3 K16254 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 343.0
SYD3_k127_414299_5 cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000793 306.0
SYD3_k127_414299_6 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000281 209.0
SYD3_k127_414299_7 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.000000000000000000000000000000000000000007978 169.0
SYD3_k127_414299_8 Stress-induced bacterial acidophilic repeat motif K06884 - - 0.0000000000000000000002443 102.0
SYD3_k127_414299_9 PFAM CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.00000003353 60.0
SYD3_k127_41490_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 3.084e-237 762.0
SYD3_k127_41490_1 Peptidase family M13 K07386 - - 1.723e-205 660.0
SYD3_k127_41490_2 TIGRFAM DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000001064 244.0
SYD3_k127_41490_3 Radical SAM superfamily - - - 0.0000000000000000000000000000000000000309 162.0
SYD3_k127_41490_4 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000008814 116.0
SYD3_k127_41490_5 Iron-sulfur cluster-binding domain - - - 0.000000000000000000009993 104.0
SYD3_k127_41490_6 PFAM Glycosyl transferase family 2 - - - 0.00000000000000002761 95.0
SYD3_k127_41490_7 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0001089 49.0
SYD3_k127_4197122_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009909 557.0
SYD3_k127_4197122_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 430.0
SYD3_k127_4197122_10 TonB-dependent Receptor Plug Domain K16092 - - 0.000000000000000000000000000000000000000000000000000000000002472 236.0
SYD3_k127_4197122_11 AIR carboxylase K06898 - - 0.000000000000000000000000000000000000000000000119 181.0
SYD3_k127_4197122_12 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000002711 175.0
SYD3_k127_4197122_13 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000001143 154.0
SYD3_k127_4197122_14 high-affinity ferrous iron transmembrane transporter activity K07243 - - 0.0000000000000000000000000000000000333 146.0
SYD3_k127_4197122_15 FMN binding K03612 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000007207 127.0
SYD3_k127_4197122_16 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000001865 127.0
SYD3_k127_4197122_17 - - - - 0.000000000000000000001548 109.0
SYD3_k127_4197122_18 Protein of unknown function (DUF1573) - - - 0.00000000000006975 83.0
SYD3_k127_4197122_19 cellulase activity - - - 0.000000000006334 78.0
SYD3_k127_4197122_2 Belongs to the MurCDEF family K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009673 396.0
SYD3_k127_4197122_20 - - - - 0.0000205 56.0
SYD3_k127_4197122_3 Pfam Transposase IS66 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 367.0
SYD3_k127_4197122_4 Transposase IS200 like K07491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006201 278.0
SYD3_k127_4197122_5 PFAM cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000002474 254.0
SYD3_k127_4197122_6 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006554 258.0
SYD3_k127_4197122_7 Domain of unknown function (DUF2437) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001428 254.0
SYD3_k127_4197122_8 Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000008645 257.0
SYD3_k127_4197122_9 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000004981 221.0
SYD3_k127_4237284_0 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008494 312.0
SYD3_k127_4237284_1 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000116 227.0
SYD3_k127_4237284_2 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000002665 193.0
SYD3_k127_4237284_3 May be involved in the transport of PQQ or its precursor to the periplasm - - - 0.000000000000000000000000000000000000000000001809 173.0
SYD3_k127_4237284_4 - - - - 0.0000317 56.0
SYD3_k127_4237284_5 Cytochrome c-type biogenesis protein CcmF C-terminal K02198,K04016 - - 0.0003405 46.0
SYD3_k127_4271489_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 330.0
SYD3_k127_4271489_1 Domain of unknown function (DUF3473) - - - 0.00000000000000000000000000000000000000000000000568 184.0
SYD3_k127_4271489_2 reductase K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.0000000000000000000000000000000000000000000001001 177.0
SYD3_k127_4271489_3 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000002383 173.0
SYD3_k127_4271489_4 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000833 179.0
SYD3_k127_4271489_5 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000000000000002412 161.0
SYD3_k127_4271489_6 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 - 1.6.5.3 0.000000000000000000000000000323 117.0
SYD3_k127_4374063_0 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001525 291.0
SYD3_k127_4374063_1 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004268 255.0
SYD3_k127_4374063_2 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000003269 191.0
SYD3_k127_4374063_3 Hep Hag repeat protein - GO:0005575,GO:0005576 - 0.000000000000000000000000000000000000001089 166.0
SYD3_k127_4374063_4 polysaccharide deacetylase - - - 0.0000000000000001558 93.0
SYD3_k127_4374063_5 polysaccharide deacetylase - - - 0.0000000000000008322 90.0
SYD3_k127_4374063_7 HlyD membrane-fusion protein of T1SS - - - 0.000293 51.0
SYD3_k127_437610_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 486.0
SYD3_k127_437610_1 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005117 469.0
SYD3_k127_437610_2 transcriptional regulator - - - 0.00000000000000000000000000000000001621 147.0
SYD3_k127_437610_3 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.000000000000000000001607 109.0
SYD3_k127_437610_5 - - - - 0.00000000000004205 77.0
SYD3_k127_4400002_0 PFAM glycosyl hydrolase BNR repeat-containing protein - - - 0.0 1109.0
SYD3_k127_4400002_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006842 592.0
SYD3_k127_4400002_10 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007264 311.0
SYD3_k127_4400002_11 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000511 303.0
SYD3_k127_4400002_12 TIGRFAM Tyrosine recombinase XerD K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004938 291.0
SYD3_k127_4400002_13 ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001747 282.0
SYD3_k127_4400002_14 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000002668 258.0
SYD3_k127_4400002_15 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000001787 240.0
SYD3_k127_4400002_16 Carbon-nitrogen hydrolase K03820 - - 0.0000000000000000000000000000000000000000000000000000000000874 225.0
SYD3_k127_4400002_17 aminopeptidase activity K07004 - - 0.00000000000000000000000000000000000000000000000000000002724 222.0
SYD3_k127_4400002_18 PFAM response regulator receiver, regulatory protein LuxR - - - 0.00000000000000000000000000000000000000000000000000000007268 210.0
SYD3_k127_4400002_19 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000001569 207.0
SYD3_k127_4400002_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004441 497.0
SYD3_k127_4400002_20 NUDIX domain - - - 0.0000000000000000000000000000000000000000000225 168.0
SYD3_k127_4400002_21 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000000000004827 166.0
SYD3_k127_4400002_22 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000824 154.0
SYD3_k127_4400002_23 Transglycosylase SLT domain - - - 0.000000000000000000000000000002592 138.0
SYD3_k127_4400002_24 Tetratricopeptide repeat - - - 0.0000000000000001037 96.0
SYD3_k127_4400002_25 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000006101 59.0
SYD3_k127_4400002_26 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000001171 52.0
SYD3_k127_4400002_27 ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import K01338 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005782,GO:0006508,GO:0006605,GO:0006625,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0015031,GO:0015833,GO:0016043,GO:0016485,GO:0019538,GO:0031907,GO:0031974,GO:0033036,GO:0033365,GO:0034613,GO:0042579,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043574,GO:0044238,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051604,GO:0051641,GO:0051649,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072662,GO:0072663,GO:1901564 3.4.21.53 0.00001626 58.0
SYD3_k127_4400002_3 Belongs to the thiolase family K07508 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007521 425.0
SYD3_k127_4400002_4 3-hydroxyacyl-CoA dehydrogenase domain protein K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003228 380.0
SYD3_k127_4400002_5 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005266 378.0
SYD3_k127_4400002_6 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003096 373.0
SYD3_k127_4400002_7 Threonine dehydratase K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008943 358.0
SYD3_k127_4400002_8 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 328.0
SYD3_k127_4400002_9 Pyridoxal-dependent decarboxylase conserved domain K01593,K01634 - 4.1.1.105,4.1.1.28,4.1.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003128 319.0
SYD3_k127_4463845_0 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 614.0
SYD3_k127_4463845_1 Aminotransferase K14267,K14287 - 2.6.1.17,2.6.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003438 462.0
SYD3_k127_4463845_2 Cys/Met metabolism PLP-dependent enzyme K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 418.0
SYD3_k127_4463845_3 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009624 379.0
SYD3_k127_4463845_4 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001938 269.0
SYD3_k127_4463845_5 Amino acid permease K20265 - - 0.0000000000000000000000000000000000000000001392 168.0
SYD3_k127_4463845_6 - - - - 0.0000037 59.0
SYD3_k127_4463845_7 PA14 domain - GO:0005575,GO:0005576 - 0.0000403 55.0
SYD3_k127_4632529_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 505.0
SYD3_k127_4632529_1 Fatty acid oxidation complex K01782 GO:0003674,GO:0003824,GO:0003857,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0008692,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0016856,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 1.1.1.35,4.2.1.17,5.1.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006138 493.0
SYD3_k127_4632529_10 alcohol dehydrogenase K13953 - 1.1.1.1 0.0000000001388 64.0
SYD3_k127_4632529_11 TPR repeat - - - 0.0000000007706 70.0
SYD3_k127_4632529_2 Peptidase family S58 K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 436.0
SYD3_k127_4632529_3 PFAM Rhomboid family protein K07059 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009281 274.0
SYD3_k127_4632529_4 PFAM Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000002966 224.0
SYD3_k127_4632529_5 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000001151 213.0
SYD3_k127_4632529_6 Protein of unknown function (DUF962) - - - 0.000000000000000002942 93.0
SYD3_k127_4632529_7 gluconolactonase activity K04771 - 3.4.21.107 0.00000000000000003108 93.0
SYD3_k127_4632529_8 COGs COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain K04771 - 3.4.21.107 0.0000000000000006864 91.0
SYD3_k127_4645703_0 benzoyl-CoA reductase K04113 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 582.0
SYD3_k127_4645703_1 COG4263 Nitrous oxide reductase K00376 - 1.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003717 539.0
SYD3_k127_4645703_10 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000005735 200.0
SYD3_k127_4645703_11 Cytochrome c K00373,K00405,K17052 GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016530,GO:0022607,GO:0034622,GO:0042126,GO:0042128,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0051131,GO:0065003,GO:0071704,GO:0071840,GO:0071941,GO:0140104,GO:2001057 - 0.0000000000000000000000000000000000000000000005504 181.0
SYD3_k127_4645703_12 ABC transporter K01990,K19340 - - 0.000000000000000000000000000000000000000009414 177.0
SYD3_k127_4645703_13 ABC-2 family transporter protein K19341 - - 0.00000000000000000000000000000000000000007731 162.0
SYD3_k127_4645703_14 Pfam Hemerythrin HHE cation binding domain - - - 0.000000000000000000000002355 111.0
SYD3_k127_4645703_15 Acetyltransferase (GNAT) family - - - 0.0000000000000000000005414 103.0
SYD3_k127_4645703_16 Universal stress protein K06149 - - 0.0000000000000000000006507 101.0
SYD3_k127_4645703_17 lipoprotein involved in nitrous oxide reduction - - - 0.000000000000005452 89.0
SYD3_k127_4645703_18 lipoprotein involved in nitrous oxide reduction - - - 0.0001568 53.0
SYD3_k127_4645703_2 BadF/BadG/BcrA/BcrD ATPase family K04114 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006366 465.0
SYD3_k127_4645703_3 Enoyl-CoA hydratase K07539,K18570 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009150,GO:0009154,GO:0009166,GO:0009259,GO:0009261,GO:0009987,GO:0016787,GO:0016822,GO:0016823,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0033865,GO:0033869,GO:0033875,GO:0034031,GO:0034032,GO:0034034,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044273,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901787,GO:1901788 3.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 396.0
SYD3_k127_4645703_4 benzoyl-CoA reductase K04112 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004367 398.0
SYD3_k127_4645703_5 Zinc-binding dehydrogenase K07538 - 1.1.1.368 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 370.0
SYD3_k127_4645703_6 BadF/BadG/BcrA/BcrD ATPase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001035 293.0
SYD3_k127_4645703_7 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001129 265.0
SYD3_k127_4645703_8 Periplasmic copper-binding protein (NosD) K07218 - - 0.00000000000000000000000000000000000000000000000000000000000000000007394 255.0
SYD3_k127_4645703_9 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.000000000000000000000000000000000000000000000000000001593 201.0
SYD3_k127_466486_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 4.301e-201 644.0
SYD3_k127_466486_1 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004259 441.0
SYD3_k127_466486_10 Protein of unknown function, DUF547 - - - 0.000000000000000000000000000000003439 147.0
SYD3_k127_466486_11 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.00000000000000000000000000469 128.0
SYD3_k127_466486_12 - - - - 0.00000000000000000003585 106.0
SYD3_k127_466486_13 HDOD domain - - - 0.0001635 54.0
SYD3_k127_466486_14 oxidoreductase activity - - - 0.0003823 50.0
SYD3_k127_466486_2 Acyl-CoA dehydrogenase, N-terminal domain K00248,K00249 - 1.3.8.1,1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 416.0
SYD3_k127_466486_3 Phosphate transporter family K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 402.0
SYD3_k127_466486_4 catalyzes the methylation of cytosine at position 1962 of the 23S rRNA K06969 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 307.0
SYD3_k127_466486_5 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003929 275.0
SYD3_k127_466486_6 PFAM Thymidine kinase K00857 - 2.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000001135 246.0
SYD3_k127_466486_7 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000004967 246.0
SYD3_k127_466486_8 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000226 194.0
SYD3_k127_466486_9 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000009927 182.0
SYD3_k127_4700880_0 ATPsynthase alpha/beta subunit N-term extension K02117 - 3.6.3.14,3.6.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 616.0
SYD3_k127_4700880_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007406 514.0
SYD3_k127_4700880_2 ATP synthase alpha/beta family, nucleotide-binding domain K02118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 505.0
SYD3_k127_4700880_3 ATP hydrolysis coupled proton transport K02123 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 368.0
SYD3_k127_4700880_4 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 316.0
SYD3_k127_4700880_5 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003289 271.0
SYD3_k127_4700880_6 Adenylylsulfate kinase K00860 - 2.7.1.25 0.00000000000000000000000000000000002539 141.0
SYD3_k127_4700880_7 ATP hydrolysis coupled proton transport K02110,K02124 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000001913 96.0
SYD3_k127_4751353_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 3.053e-270 859.0
SYD3_k127_4751353_1 Belongs to the glycosyl hydrolase 57 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 573.0
SYD3_k127_4751353_2 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007911 311.0
SYD3_k127_4751353_3 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 301.0
SYD3_k127_4751353_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000114 231.0
SYD3_k127_4751353_5 MOSC domain - - - 0.000000000000000000000000000000000000000000000000001771 203.0
SYD3_k127_4751353_6 PFAM glycosyl transferase, family 35 K00688 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 2.4.1.1 0.0000000000000000000000000000002278 134.0
SYD3_k127_4751353_7 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.000000000001322 74.0
SYD3_k127_4751353_8 Putative restriction endonuclease - - - 0.000004404 50.0
SYD3_k127_4809978_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.83e-210 670.0
SYD3_k127_4809978_1 UvrD/REP helicase N-terminal domain K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005264 543.0
SYD3_k127_4809978_10 spore germination - - - 0.0000000000000000000000000000000000000000000001951 189.0
SYD3_k127_4809978_11 - - - - 0.0000000000000000000000000000000000000000000466 171.0
SYD3_k127_4809978_12 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000716 138.0
SYD3_k127_4809978_13 Pfam:UPF0118 - - - 0.000000000000000000000000000000000009727 153.0
SYD3_k127_4809978_14 Belongs to the multicopper oxidase YfiH RL5 family K05810 GO:0003674,GO:0005488,GO:0005507,GO:0043167,GO:0043169,GO:0046872,GO:0046914 - 0.0000000000000000000000000004146 126.0
SYD3_k127_4809978_15 chlorophyll binding - - - 0.00000000000000000192 90.0
SYD3_k127_4809978_16 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811 - - 0.000000000000004085 85.0
SYD3_k127_4809978_17 peptidyl-tyrosine sulfation - - - 0.00000000001709 74.0
SYD3_k127_4809978_18 SprT-like family - - - 0.000005895 55.0
SYD3_k127_4809978_19 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.0004293 44.0
SYD3_k127_4809978_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005511 476.0
SYD3_k127_4809978_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009132 380.0
SYD3_k127_4809978_4 Peptidase family S58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008017 281.0
SYD3_k127_4809978_5 Cell division ATP-binding protein ftsE K09811,K09812 GO:0000166,GO:0000287,GO:0000910,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0007049,GO:0008144,GO:0008150,GO:0008356,GO:0009898,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019897,GO:0019898,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0030145,GO:0030554,GO:0031234,GO:0032153,GO:0032506,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042173,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043937,GO:0043938,GO:0044085,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0046677,GO:0046872,GO:0046914,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051301,GO:0065007,GO:0070297,GO:0071840,GO:0071944,GO:0090529,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1902531 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009262 273.0
SYD3_k127_4809978_6 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000001943 266.0
SYD3_k127_4809978_7 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000002844 238.0
SYD3_k127_4809978_8 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000121 206.0
SYD3_k127_4809978_9 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.0000000000000000000000000000000000000000000000000278 186.0
SYD3_k127_4916083_0 xanthine dehydrogenase activity K04108 - 1.3.7.9 7.635e-300 941.0
SYD3_k127_4916083_1 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 314.0
SYD3_k127_4916083_2 Domain of unknown function (DUF4394) - - - 0.0000000000000000000000000000000000000000000000000000000000009935 222.0
SYD3_k127_4916083_3 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000002073 213.0
SYD3_k127_4916083_4 - - - - 0.00000000000000000000000000000008234 133.0
SYD3_k127_4916083_5 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000156 115.0
SYD3_k127_4916083_6 RNA recognition motif - - - 0.0000000000000000000000000005334 115.0
SYD3_k127_4933086_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005821 605.0
SYD3_k127_4933086_1 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006195 613.0
SYD3_k127_4933086_10 CHRD domain - - - 0.000000001186 71.0
SYD3_k127_4933086_11 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.0006911 42.0
SYD3_k127_4933086_12 Pfam Condensation domain - - - 0.0008571 51.0
SYD3_k127_4933086_13 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.0009359 48.0
SYD3_k127_4933086_2 secondary active sulfate transmembrane transporter activity K06901 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 521.0
SYD3_k127_4933086_3 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009071 454.0
SYD3_k127_4933086_4 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 410.0
SYD3_k127_4933086_5 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000499 370.0
SYD3_k127_4933086_6 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007151 299.0
SYD3_k127_4933086_7 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000008513 188.0
SYD3_k127_4933086_8 - - - - 0.000000000000000000000000000038 122.0
SYD3_k127_4933086_9 N-formylglutamate amidohydrolase - - - 0.000000000000000000000000008596 119.0
SYD3_k127_5059104_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.43e-278 871.0
SYD3_k127_5059104_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006192 554.0
SYD3_k127_5059104_2 Phosphoglucose isomerase K01810,K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 479.0
SYD3_k127_5059104_3 Glycogen debranching enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003109 437.0
SYD3_k127_5059104_4 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 396.0
SYD3_k127_5059104_5 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000003763 198.0
SYD3_k127_5059104_6 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000551 121.0
SYD3_k127_5059104_7 mitochondrial outer membrane translocase receptor TOM70 K17768 GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005742,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0008104,GO:0008150,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0017038,GO:0019867,GO:0030150,GO:0030943,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031306,GO:0031307,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0032592,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044743,GO:0045039,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072655,GO:0072657,GO:0090150,GO:0090151,GO:0098573,GO:0098588,GO:0098796,GO:0098798,GO:0098799,GO:0098805,GO:1990542 - 0.0009869 49.0
SYD3_k127_5069392_0 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 522.0
SYD3_k127_5069392_1 Domain of unknown function (DUF3943) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000189 265.0
SYD3_k127_5069392_2 Beta/gamma crystallins - - - 0.00000000000000000000000000000000000000003003 164.0
SYD3_k127_5069392_3 LppP/LprE lipoprotein - - - 0.00000000006634 76.0
SYD3_k127_5073519_0 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005585 509.0
SYD3_k127_5073519_1 Two component, sigma54 specific, transcriptional regulator, Fis family K07713,K07714,K19641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 362.0
SYD3_k127_5073519_10 acr, cog1430 K09005 - - 0.00000000000000000000000001089 115.0
SYD3_k127_5073519_11 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000125 113.0
SYD3_k127_5073519_12 Regulatory protein, FmdB family - - - 0.00000000000000000002106 94.0
SYD3_k127_5073519_13 Methyltransferase domain - - - 0.0000000000000001096 89.0
SYD3_k127_5073519_14 phosphorelay signal transduction system - - - 0.00000000000000508 89.0
SYD3_k127_5073519_15 Alpha/beta hydrolase family - - - 0.00000000002315 75.0
SYD3_k127_5073519_2 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006844 355.0
SYD3_k127_5073519_3 lipoprotein localization to outer membrane K02004,K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002186 280.0
SYD3_k127_5073519_4 molybdopterin binding domain K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000004392 249.0
SYD3_k127_5073519_5 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000007313 241.0
SYD3_k127_5073519_6 protein conserved in bacteria K09797 - - 0.0000000000000000000000000000000000000000000000000000000000000000003832 239.0
SYD3_k127_5073519_7 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000003563 206.0
SYD3_k127_5073519_8 FAD binding domain - - - 0.000000000000000000000000000000000000000000004208 179.0
SYD3_k127_5073519_9 XdhC and CoxI family K07402 - - 0.00000000000000000000000000000000000000003768 163.0
SYD3_k127_509395_0 PFAM FAD linked oxidase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 515.0
SYD3_k127_509395_1 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001349 301.0
SYD3_k127_509395_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000001149 155.0
SYD3_k127_509395_3 Uncharacterized membrane protein (DUF2298) - - - 0.00000000000000000000000006032 111.0
SYD3_k127_509395_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000004863 58.0
SYD3_k127_5120635_0 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 - 3.4.21.83 1.601e-257 811.0
SYD3_k127_5120635_1 WD40 domain protein beta Propeller K12132 - 2.7.11.1 1.203e-217 707.0
SYD3_k127_5120635_2 Protein tyrosine kinase - - - 1.225e-199 652.0
SYD3_k127_5120635_3 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000791 494.0
SYD3_k127_5120635_4 sequence-specific DNA binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007534 370.0
SYD3_k127_5120635_5 cAMP biosynthetic process K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 348.0
SYD3_k127_5120635_6 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.00000000000000000000000000000000000002224 145.0
SYD3_k127_5120635_7 toxin-antitoxin pair type II binding - - - 0.00000000000000001357 89.0
SYD3_k127_5120635_8 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000008277 89.0
SYD3_k127_5120635_9 Ribbon-helix-helix protein, copG family - - - 0.0000000000000006692 86.0
SYD3_k127_513987_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 583.0
SYD3_k127_513987_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008052 436.0
SYD3_k127_513987_10 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000002895 208.0
SYD3_k127_513987_11 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000001498 211.0
SYD3_k127_513987_12 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000003655 182.0
SYD3_k127_513987_13 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000000002029 177.0
SYD3_k127_513987_14 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000008496 179.0
SYD3_k127_513987_15 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.0000000000000000000000000000000000000000000000276 173.0
SYD3_k127_513987_16 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000002274 156.0
SYD3_k127_513987_17 Binds to the 23S rRNA K02876 - - 0.0000000000000000000000000000000000000001705 160.0
SYD3_k127_513987_18 Forms part of the polypeptide exit tunnel K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000004219 158.0
SYD3_k127_513987_19 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000567 151.0
SYD3_k127_513987_2 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 406.0
SYD3_k127_513987_20 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000000004527 141.0
SYD3_k127_513987_21 structural constituent of ribosome K02879 - - 0.0000000000000000000000000000000008945 137.0
SYD3_k127_513987_22 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000001396 136.0
SYD3_k127_513987_23 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000008109 117.0
SYD3_k127_513987_24 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000001221 106.0
SYD3_k127_513987_25 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000002832 108.0
SYD3_k127_513987_26 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000004087 99.0
SYD3_k127_513987_27 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000009147 103.0
SYD3_k127_513987_28 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000001281 87.0
SYD3_k127_513987_29 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000007779 66.0
SYD3_k127_513987_3 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 298.0
SYD3_k127_513987_30 50S ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000002767 64.0
SYD3_k127_513987_31 PFAM VanZ like - - - 0.00000006143 59.0
SYD3_k127_513987_32 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00002906 54.0
SYD3_k127_513987_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001699 276.0
SYD3_k127_513987_5 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000005485 283.0
SYD3_k127_513987_6 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000002413 249.0
SYD3_k127_513987_7 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000691 239.0
SYD3_k127_513987_8 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000002165 208.0
SYD3_k127_513987_9 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000004921 209.0
SYD3_k127_5172941_0 ABC transporter transmembrane K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 522.0
SYD3_k127_5172941_1 Belongs to the BI1 family K06890,K19416 - - 0.000000000000000000000000000000000000000000000000000000000003419 217.0
SYD3_k127_5172941_2 photosynthesis - - - 0.000000000000000000000000000000000000000000217 172.0
SYD3_k127_5172941_3 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.0000000000000000000000001762 116.0
SYD3_k127_5172941_4 peptidoglycan-binding protein - - - 0.0000000000000000000000001772 111.0
SYD3_k127_5221738_0 Glyceraldehyde-3-phosphate dehydrogenase K00150 - 1.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006487 421.0
SYD3_k127_5221738_1 - K07018 - - 0.0000000000000000000000000000000000000000005024 170.0
SYD3_k127_5221738_2 AMMECR1 K09141 - - 0.0000000000000000000000000000000000000000006108 164.0
SYD3_k127_5221738_3 OST-HTH/LOTUS domain - - - 0.000000000000000000000000000000000000002346 149.0
SYD3_k127_5221738_4 SpoU rRNA Methylase family K03437 - - 0.00000000000000000000000000000001576 136.0
SYD3_k127_5221738_5 - - - - 0.000000002107 64.0
SYD3_k127_525331_0 GTP binding K06883 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006246 269.0
SYD3_k127_525331_1 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002383 251.0
SYD3_k127_525331_2 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000008083 207.0
SYD3_k127_525331_3 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.000000000000000000000000002994 119.0
SYD3_k127_525331_4 NADP oxidoreductase coenzyme F420-dependent - - - 0.00000000000000000000000018 117.0
SYD3_k127_526031_0 Cation transporter/ATPase, N-terminus K01531,K12955 - 3.6.3.2 2.815e-287 904.0
SYD3_k127_526031_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 2.042e-232 731.0
SYD3_k127_526031_10 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001968 283.0
SYD3_k127_526031_11 DNA-directed DNA polymerase activity K02347,K03581,K04477 - 3.1.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002454 276.0
SYD3_k127_526031_12 Predicted membrane protein (DUF2238) K08984 - - 0.00000000000000000000000000000000000000000000000000000000000000000001619 240.0
SYD3_k127_526031_13 Phosphoribosyl transferase domain K07100 - - 0.0000000000000000000000000000000000000000000000000000001451 205.0
SYD3_k127_526031_14 PFAM iron dependent repressor K03709 - - 0.000000000000000000000000000000000000000000000000000001249 204.0
SYD3_k127_526031_15 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000006957 170.0
SYD3_k127_526031_16 PFAM Archease protein family (DUF101 UPF0211) K00974 - 2.7.7.72 0.00000000000000000000000000000006483 138.0
SYD3_k127_526031_17 PFAM CBS domain containing protein K07168 - - 0.00000000000000000000000001621 115.0
SYD3_k127_526031_18 periplasmic or secreted lipoprotein - - - 0.0000000000000000001219 96.0
SYD3_k127_526031_19 Dodecin K09165 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000001402 98.0
SYD3_k127_526031_2 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 9.255e-205 658.0
SYD3_k127_526031_20 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.0000000000000000003821 98.0
SYD3_k127_526031_21 Putative phosphatase (DUF442) - - - 0.000000000000001054 86.0
SYD3_k127_526031_22 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000002254 85.0
SYD3_k127_526031_23 CBS domain K04767 - - 0.0000000000001359 79.0
SYD3_k127_526031_24 Belongs to the universal stress protein A family - - - 0.00000002067 66.0
SYD3_k127_526031_3 PFAM Uncharacterised protein family UPF0027 K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000087 603.0
SYD3_k127_526031_4 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 589.0
SYD3_k127_526031_5 Radical SAM superfamily K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 548.0
SYD3_k127_526031_6 S-adenosylmethionine synthetase (AdoMet synthetase) K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004882 488.0
SYD3_k127_526031_7 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006113 437.0
SYD3_k127_526031_8 Phosphoribosyl synthetase-associated domain K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 364.0
SYD3_k127_526031_9 Phosphomethylpyrimidine kinase K16370 - 2.7.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003077 344.0
SYD3_k127_5300306_0 Bacterial regulatory protein, Fis family K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005639 286.0
SYD3_k127_5300306_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000004701 237.0
SYD3_k127_5300306_2 Subtilase family - - - 0.000000000000000000000000000000000000000000004396 189.0
SYD3_k127_5300306_3 Calcineurin-like phosphoesterase K03269 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0019897,GO:0019898,GO:0030145,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.54 0.0000000000000000000000000000000000003934 150.0
SYD3_k127_5300306_4 Domain of unknown function (DUF1736) - GO:0001763,GO:0002009,GO:0003401,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006950,GO:0007275,GO:0008150,GO:0009653,GO:0009791,GO:0009887,GO:0009888,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010468,GO:0010604,GO:0012505,GO:0019222,GO:0030154,GO:0030162,GO:0030323,GO:0030324,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0033554,GO:0034976,GO:0035239,GO:0035295,GO:0040007,GO:0042176,GO:0042692,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045732,GO:0045862,GO:0048286,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048589,GO:0048729,GO:0048731,GO:0048747,GO:0048754,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051146,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051716,GO:0055001,GO:0055002,GO:0060255,GO:0060425,GO:0060429,GO:0060441,GO:0060447,GO:0060541,GO:0060560,GO:0060562,GO:0060602,GO:0061061,GO:0061136,GO:0061138,GO:0065007,GO:0080090,GO:1901800,GO:1903050,GO:1903052,GO:1903362,GO:1903364 - 0.0000000000000000000000000000002164 139.0
SYD3_k127_5356406_0 class II (D K and N) K01893 - 6.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 553.0
SYD3_k127_5356406_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 422.0
SYD3_k127_5356406_2 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000003578 247.0
SYD3_k127_5356406_3 manganese ion transmembrane transporter activity - - - 0.000000000000000000000000000000000000001904 169.0
SYD3_k127_5356406_4 Ami_3 K01448 - 3.5.1.28 0.0003259 54.0
SYD3_k127_5369148_0 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 423.0
SYD3_k127_5369148_1 Glucose dehydrogenase C-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006708 276.0
SYD3_k127_5369148_2 - - - - 0.0000000000000000000000000000000006772 141.0
SYD3_k127_5386867_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 445.0
SYD3_k127_5386867_1 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000000000000000000000000000000000000000002151 238.0
SYD3_k127_5386867_2 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000000000008184 168.0
SYD3_k127_5386867_3 Transcriptional regulator K07506 - - 0.00000000000000000000000000000000004746 141.0
SYD3_k127_5386867_4 - - - - 0.000002281 53.0
SYD3_k127_5386867_5 Protein of unknown function (DUF3828) - - - 0.000007508 57.0
SYD3_k127_5456453_0 Protein kinase domain K12132 - 2.7.11.1 2.66e-226 728.0
SYD3_k127_5456453_1 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007405 602.0
SYD3_k127_5456453_2 PIN domain - - - 0.00000000000000000000000000000000000000005032 156.0
SYD3_k127_5462605_0 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 8.381e-195 620.0
SYD3_k127_5462605_1 PFAM NHL repeat containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 308.0
SYD3_k127_5462605_2 Phosphoribosyl transferase domain K07100 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002777 279.0
SYD3_k127_5462605_3 carboxymethylenebutenolidase activity K01061,K07100 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004747 282.0
SYD3_k127_5462605_4 Family of unknown function (DUF5335) - - - 0.000000003494 63.0
SYD3_k127_5529936_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138,K18307 - - 0.0 1270.0
SYD3_k127_5529936_1 imidazolonepropionase activity K01443 - 3.5.1.25 5.786e-211 689.0
SYD3_k127_5529936_2 imidazolonepropionase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005323 363.0
SYD3_k127_5529936_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 335.0
SYD3_k127_5529936_4 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009791 274.0
SYD3_k127_5529936_5 glycosyl hydrolase, BNR repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000004741 232.0
SYD3_k127_5529936_6 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000004594 154.0
SYD3_k127_5529936_7 EVE domain - - - 0.0000000000000000000000000000000000001166 153.0
SYD3_k127_5529936_8 Protein of unknown function (DUF2911) - - - 0.00000000000000000002242 99.0
SYD3_k127_5529936_9 L,D-transpeptidase catalytic domain - - - 0.00000009651 59.0
SYD3_k127_5537833_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 432.0
SYD3_k127_5537833_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007144 367.0
SYD3_k127_5537833_2 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 324.0
SYD3_k127_5537833_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001743 283.0
SYD3_k127_5537833_4 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000001985 254.0
SYD3_k127_5537833_5 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.000000000000000000000000000000002823 133.0
SYD3_k127_5537833_6 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.0000000000000000000000000000001303 134.0
SYD3_k127_5537833_7 Preprotein translocase subunit K03210 - - 0.00000000000000000001557 97.0
SYD3_k127_5537833_8 Tetratricopeptide repeat - - - 0.0000000000002054 83.0
SYD3_k127_5537833_9 Protein of unknown function (FYDLN_acid) - - - 0.0000000003376 71.0
SYD3_k127_5568897_0 Cys/Met metabolism PLP-dependent enzyme K01760,K17217 - 4.4.1.1,4.4.1.2,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 492.0
SYD3_k127_5568897_1 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007231 351.0
SYD3_k127_5568897_2 Belongs to the cysteine synthase cystathionine beta- synthase family K01697,K01738 - 2.5.1.47,4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 316.0
SYD3_k127_5568897_3 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 307.0
SYD3_k127_5568897_4 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008906 291.0
SYD3_k127_5568897_5 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002054 253.0
SYD3_k127_5568897_6 PFAM Rhodanese domain protein K03892 - - 0.000000000000000000000000000000000000000000000000000000000000000000001204 243.0
SYD3_k127_5568897_7 Probable zinc-ribbon domain - - - 0.0000000000000000000000000000002393 129.0
SYD3_k127_5568897_8 Cysteine-rich secretory protein family - - - 0.000000000000000000006963 103.0
SYD3_k127_5568897_9 CutA1 divalent ion tolerance protein K03926 - - 0.00000000000000000001411 96.0
SYD3_k127_556948_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009189 356.0
SYD3_k127_556948_1 protein conserved in bacteria (DUF2064) K09931 - - 0.00000000000000000000000000000324 128.0
SYD3_k127_556948_2 Glutathione peroxidase - - - 0.000000000000000000003531 102.0
SYD3_k127_556948_3 ATPase or kinase K06925 - - 0.00000000000000001009 91.0
SYD3_k127_556948_4 Belongs to the ompA family K03286 - - 0.0002682 51.0
SYD3_k127_5620882_0 PFAM MgsA AAA ATPase C terminal K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 311.0
SYD3_k127_5620882_1 CarD-like/TRCF domain K07736 - - 0.000000000000000000000000000000000000006139 151.0
SYD3_k127_5620882_2 SMART Tetratricopeptide - - - 0.0000000001104 74.0
SYD3_k127_5623483_0 Fumarase C C-terminus K01744 - 4.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 480.0
SYD3_k127_5623483_1 Urate oxidase N-terminal - - - 0.00000000000000000000000000000000000000002459 161.0
SYD3_k127_5623483_2 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000007278 96.0
SYD3_k127_5623483_3 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006276,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0010332,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042221,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0046677,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 - 0.00000000000001725 78.0
SYD3_k127_5626452_0 ABC transporter K06020 - 3.6.3.25 5.04e-263 819.0
SYD3_k127_5626452_1 Acyl-CoA dehydrogenase, N-terminal domain - - - 8.137e-222 704.0
SYD3_k127_5626452_10 Transglycosylase associated protein - - - 0.0000000000000000000000001056 109.0
SYD3_k127_5626452_11 Transglycosylase associated protein - - - 0.0000000000000000000000003558 108.0
SYD3_k127_5626452_12 Protein of unknown function (DUF983) - - - 0.0000000000001419 78.0
SYD3_k127_5626452_2 Amidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 473.0
SYD3_k127_5626452_3 saccharopine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000436 324.0
SYD3_k127_5626452_4 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 312.0
SYD3_k127_5626452_5 Protein of unknown function (DUF1624) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006554 313.0
SYD3_k127_5626452_6 Beta-lactamase superfamily domain K06136 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001431 269.0
SYD3_k127_5626452_7 enzyme related to lactoylglutathione lyase K06996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009852 244.0
SYD3_k127_5626452_8 Creatinase/Prolidase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000001274 228.0
SYD3_k127_5626452_9 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000001003 198.0
SYD3_k127_5631737_0 Peptidase m28 - - - 8.733e-223 729.0
SYD3_k127_5631737_1 beta-lactamase - - - 1.669e-217 724.0
SYD3_k127_5631737_10 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007267 421.0
SYD3_k127_5631737_11 Sodium:solute symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005394 375.0
SYD3_k127_5631737_12 Histidine-specific methyltransferase, SAM-dependent K18911 - 2.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 351.0
SYD3_k127_5631737_13 SMART band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004089 359.0
SYD3_k127_5631737_14 LD-carboxypeptidase K01297 - 3.4.17.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008963 330.0
SYD3_k127_5631737_15 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007269 279.0
SYD3_k127_5631737_16 Mechanosensitive ion channel K05802 - - 0.000000000000000000000000000000000000000000000000000000000000000002726 246.0
SYD3_k127_5631737_17 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K02564 - 3.5.99.6 0.0000000000000000000000000000000000000000000000008977 186.0
SYD3_k127_5631737_18 Probably catalyzes the deacetylation of acetylated carbohydrates an important step in the degradation of oligosaccharides K03478 - 3.5.1.105 0.0000000000000000000000000000000000000000000006687 179.0
SYD3_k127_5631737_19 translation initiation inhibitor, yjgF family K04782 - 4.2.99.21 0.0000000000000000000000000000000000000000001758 171.0
SYD3_k127_5631737_2 PFAM peptidase M28 - - - 2.808e-204 652.0
SYD3_k127_5631737_20 BadF/BadG/BcrA/BcrD ATPase family - - - 0.000000000000000000000000000000000000000000245 170.0
SYD3_k127_5631737_21 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.00000000000000000000000000000000001 139.0
SYD3_k127_5631737_22 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.00000000000000000000000000000000003556 139.0
SYD3_k127_5631737_23 DNA primase activity - - - 0.000000000000000000000000000000001273 141.0
SYD3_k127_5631737_24 - - - - 0.00000005879 62.0
SYD3_k127_5631737_3 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01585 - 4.1.1.19 3.847e-204 654.0
SYD3_k127_5631737_4 Peptidase dimerisation domain K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 611.0
SYD3_k127_5631737_5 Sodium:solute symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 597.0
SYD3_k127_5631737_6 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004953 490.0
SYD3_k127_5631737_7 Acetyl-coenzyme A transporter 1 K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 458.0
SYD3_k127_5631737_8 COG3540 Phosphodiesterase alkaline phosphatase D K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 443.0
SYD3_k127_5631737_9 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 458.0
SYD3_k127_566028_0 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008244 244.0
SYD3_k127_566028_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000005411 234.0
SYD3_k127_566028_2 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000007124 235.0
SYD3_k127_566028_3 Histidine kinase K08082 - 2.7.13.3 0.000000000000000000000000000000000000003004 162.0
SYD3_k127_566028_4 TonB-dependent receptor - - - 0.00000000000000000000000000007666 132.0
SYD3_k127_5663865_0 PAS fold-4 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009235 619.0
SYD3_k127_5663865_1 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 376.0
SYD3_k127_5663865_2 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535,K13599 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000001428 241.0
SYD3_k127_5663865_3 Regulatory protein K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000004965 235.0
SYD3_k127_5663865_4 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000004141 179.0
SYD3_k127_5663865_5 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000003854 162.0
SYD3_k127_5663865_6 FR47-like protein K03789 - 2.3.1.128 0.0000000000000000000000005272 110.0
SYD3_k127_5719285_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005973 409.0
SYD3_k127_5719285_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 405.0
SYD3_k127_5719285_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 324.0
SYD3_k127_5719285_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006736 299.0
SYD3_k127_5719285_4 Belongs to the SEDS family K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002334 289.0
SYD3_k127_5719285_5 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000082 244.0
SYD3_k127_5800019_0 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 297.0
SYD3_k127_5800019_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007783 267.0
SYD3_k127_5800019_2 Glycosyl Transferase - - - 0.0000000000000001385 89.0
SYD3_k127_5800019_3 Conserved repeat domain - - - 0.00002288 53.0
SYD3_k127_5820975_0 Chemotaxis K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004125 359.0
SYD3_k127_5820975_1 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 356.0
SYD3_k127_5820975_2 FRG - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 338.0
SYD3_k127_5820975_3 Stress-induced bacterial acidophilic repeat motif K06884 - - 0.000000000000000000001659 97.0
SYD3_k127_5827844_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 522.0
SYD3_k127_5827844_1 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.000000000000000000000000000000000000000000001953 169.0
SYD3_k127_5827844_2 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000124 166.0
SYD3_k127_5827844_3 Glycine zipper - - - 0.000000000000000009027 91.0
SYD3_k127_5827844_4 - - - - 0.00000007907 61.0
SYD3_k127_5829841_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008364 301.0
SYD3_k127_5829841_1 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000277 229.0
SYD3_k127_5829841_2 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000001802 186.0
SYD3_k127_5829841_3 Glycosyl Transferase - - - 0.000000000000004312 79.0
SYD3_k127_5829841_4 ubiE/COQ5 methyltransferase family - - - 0.000001302 61.0
SYD3_k127_584269_0 malic protein domain protein K00027,K00029 - 1.1.1.38,1.1.1.40 1.42e-296 931.0
SYD3_k127_584269_1 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 599.0
SYD3_k127_584269_10 peroxiredoxin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000792 258.0
SYD3_k127_584269_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000007989 243.0
SYD3_k127_584269_12 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000009992 235.0
SYD3_k127_584269_13 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000002799 213.0
SYD3_k127_584269_14 GHMP kinases C terminal K07031 - 2.7.1.168 0.000000000000000000000000000000000000000000000000000000004782 211.0
SYD3_k127_584269_15 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000002625 199.0
SYD3_k127_584269_16 it plays a direct role in the translocation of protons across the membrane K02108 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000000000003986 179.0
SYD3_k127_584269_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000002357 154.0
SYD3_k127_584269_18 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 - 1.6.5.3 0.000000000000000000000000000000006647 131.0
SYD3_k127_584269_19 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000005946 119.0
SYD3_k127_584269_2 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 594.0
SYD3_k127_584269_20 electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient K05580 - 1.6.5.3 0.00000000000000000000000001434 114.0
SYD3_k127_584269_21 Tetratricopeptide repeat - - - 0.000000000000000000000000272 124.0
SYD3_k127_584269_22 PFAM AhpC TSA family - - - 0.00000000000000000000009838 107.0
SYD3_k127_584269_23 Belongs to the complex I subunit 6 family K00339 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000002517 107.0
SYD3_k127_584269_25 Domain of unknown function (DUF4412) - - - 0.000004268 59.0
SYD3_k127_584269_26 ATP hydrolysis coupled proton transport K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00002071 56.0
SYD3_k127_584269_27 Putative zinc-finger - - - 0.0000471 53.0
SYD3_k127_584269_28 Polymer-forming cytoskeletal - - - 0.0002464 51.0
SYD3_k127_584269_3 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 579.0
SYD3_k127_584269_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 470.0
SYD3_k127_584269_5 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004505 371.0
SYD3_k127_584269_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003658 363.0
SYD3_k127_584269_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 333.0
SYD3_k127_584269_8 Cadherin repeats. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005314 279.0
SYD3_k127_584269_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000021 238.0
SYD3_k127_5860604_0 DEAD DEAH box K03724 - - 0.0 1974.0
SYD3_k127_5860604_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009344 486.0
SYD3_k127_5860604_10 Dihydrodipicolinate reductase, N-terminus K21672 - 1.4.1.12,1.4.1.26 0.000000000000000000000000000000000000000000000000000000000000000001414 243.0
SYD3_k127_5860604_11 Belongs to the FPG family K05522 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000009729 244.0
SYD3_k127_5860604_12 PFAM ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000002291 231.0
SYD3_k127_5860604_13 nucleic acid phosphodiester bond hydrolysis K07577,K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000000001439 200.0
SYD3_k127_5860604_14 Domain of unknown function (DUF4112) - - - 0.000000000000000000000000002237 128.0
SYD3_k127_5860604_15 Tetratricopeptide repeat - - - 0.000000000000000000000000004169 130.0
SYD3_k127_5860604_17 repeat-containing protein - - - 0.0000000001358 75.0
SYD3_k127_5860604_2 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 452.0
SYD3_k127_5860604_3 PFAM DNA photolyase, FAD-binding K01669 - 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 432.0
SYD3_k127_5860604_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003592 394.0
SYD3_k127_5860604_5 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 378.0
SYD3_k127_5860604_6 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008478 377.0
SYD3_k127_5860604_7 Protein of unknown function (DUF2867) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004773 351.0
SYD3_k127_5860604_8 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 328.0
SYD3_k127_5860604_9 Major facilitator Superfamily K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001356 271.0
SYD3_k127_5911230_0 Voltage gated chloride channel K03281 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008389 441.0
SYD3_k127_5911230_1 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007994 425.0
SYD3_k127_5911230_10 Tetratricopeptide repeat - - - 0.0005996 51.0
SYD3_k127_5911230_2 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 407.0
SYD3_k127_5911230_3 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 398.0
SYD3_k127_5911230_4 Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family K03317 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 388.0
SYD3_k127_5911230_5 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00756,K00758 - 2.4.2.2,2.4.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000375 391.0
SYD3_k127_5911230_6 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 324.0
SYD3_k127_5911230_7 PFAM glycosyl transferase family 2 K14597 - - 0.000000000000000000000000000000000000000000000003118 190.0
SYD3_k127_5911230_8 iron-sulfur cluster assembly K07400 - - 0.0000000000000000000000000000000000000000005436 164.0
SYD3_k127_5911230_9 Cytidine and deoxycytidylate deaminase zinc-binding region K01489 - 3.5.4.5 0.0000000000000000000000000000000000006924 148.0
SYD3_k127_592984_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.0 1232.0
SYD3_k127_592984_1 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 310.0
SYD3_k127_5957409_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883,K15526 GO:0000166,GO:0001871,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010125,GO:0010126,GO:0010467,GO:0016020,GO:0016070,GO:0016137,GO:0016138,GO:0016874,GO:0016875,GO:0016879,GO:0016880,GO:0017076,GO:0019538,GO:0019752,GO:0030246,GO:0030247,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035446,GO:0035639,GO:0036094,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:2001065 6.1.1.16,6.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 475.0
SYD3_k127_5957409_1 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000005866 146.0
SYD3_k127_5957409_2 domain, Protein - - - 0.00000000000000000000000005318 126.0
SYD3_k127_5957409_3 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.00000000000000000000000283 113.0
SYD3_k127_5996322_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 491.0
SYD3_k127_5996322_1 VIT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003683 275.0
SYD3_k127_5996322_2 Protein kinase domain K08884 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000003447 233.0
SYD3_k127_5996322_3 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000003701 193.0
SYD3_k127_6091488_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 4.09e-225 712.0
SYD3_k127_6091488_1 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004855 507.0
SYD3_k127_6091488_2 Endonuclease containing a URI domain K07461 - - 0.00000000000000000000000000000007888 128.0
SYD3_k127_6091488_3 PFAM peptidase U62 modulator of DNA gyrase K03592 - - 0.0000000000000000000002531 113.0
SYD3_k127_6091488_4 Putative modulator of DNA gyrase K03568 - - 0.0000000000000001056 93.0
SYD3_k127_6091488_5 CoA carboxylase activity K01960,K01965,K01968 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.4.1.1,6.4.1.3,6.4.1.4 0.0002224 51.0
SYD3_k127_6195192_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006687 480.0
SYD3_k127_6195192_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 325.0
SYD3_k127_6195192_10 Belongs to the sulfur carrier protein TusA family K04085 - - 0.000000000000007071 76.0
SYD3_k127_6195192_2 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 298.0
SYD3_k127_6195192_3 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000002495 217.0
SYD3_k127_6195192_4 Mannose-6-phosphate isomerase K00971 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000009558 224.0
SYD3_k127_6195192_5 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase K00996 - 2.7.8.6 0.000000000000000000000000000000000000000000000006569 173.0
SYD3_k127_6195192_7 Domain of unknown function (DUF3488) - - - 0.00000000000000000000000000182 130.0
SYD3_k127_6195192_8 Protein of unknown function DUF58 - - - 0.00000000000000000002614 106.0
SYD3_k127_6195192_9 PFAM Phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.00000000000000002337 90.0
SYD3_k127_6203829_0 Belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 3.268e-204 653.0
SYD3_k127_6203829_1 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 447.0
SYD3_k127_6203829_2 Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005116 419.0
SYD3_k127_6203829_3 PAS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003684 358.0
SYD3_k127_6203829_4 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000003848 170.0
SYD3_k127_6203829_5 Crp-like helix-turn-helix domain K10914 - - 0.0000000000000000000000000000000000818 149.0
SYD3_k127_6203829_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 - 2.7.8.41 0.0000000000000000000000001318 115.0
SYD3_k127_6203829_7 Polymer-forming cytoskeletal - - - 0.00000000000000000001508 100.0
SYD3_k127_6203829_8 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000001167 72.0
SYD3_k127_6203829_9 Glutaredoxin-like domain (DUF836) - - - 0.000000005005 68.0
SYD3_k127_6232052_0 BlaR1 peptidase M56 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 361.0
SYD3_k127_6232052_1 - - - - 0.000000000000000000000000000000000001776 149.0
SYD3_k127_6232052_2 Penicillinase repressor - - - 0.00000000000000000000000000000000001328 140.0
SYD3_k127_6232052_3 hyperosmotic response - - - 0.00000000000000000000000000003912 126.0
SYD3_k127_6238422_0 ATP-dependent helicase activity K10844 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 394.0
SYD3_k127_6238422_1 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000002615 263.0
SYD3_k127_6238422_2 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000003774 235.0
SYD3_k127_6238422_3 lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000002796 206.0
SYD3_k127_6238422_4 NUDIX domain K03574 - 3.6.1.55 0.00000000000000000000000000000000000006563 151.0
SYD3_k127_6238422_5 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000007841 101.0
SYD3_k127_6238422_6 COGs COG1426 conserved - - - 0.000000000000000000002199 108.0
SYD3_k127_6238422_7 - - - - 0.0000000000000000005553 100.0
SYD3_k127_6238422_8 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.0000000006108 70.0
SYD3_k127_6238422_9 - - - - 0.0000000041 66.0
SYD3_k127_6254317_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 530.0
SYD3_k127_6254317_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007773 387.0
SYD3_k127_6254317_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004971 314.0
SYD3_k127_6254317_3 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000001176 89.0
SYD3_k127_6254317_4 nuclear chromosome segregation - - - 0.00000000000005543 85.0
SYD3_k127_6254317_5 C4-type zinc ribbon domain K07164 - - 0.000000000002126 79.0
SYD3_k127_6254317_6 RNA-DNA hybrid ribonuclease activity K03469,K06864,K22316 GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005488,GO:0006139,GO:0006401,GO:0006725,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016891,GO:0016893,GO:0017144,GO:0018130,GO:0019438,GO:0019439,GO:0032296,GO:0033013,GO:0033014,GO:0034641,GO:0034655,GO:0042364,GO:0042578,GO:0043170,GO:0043755,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046700,GO:0051186,GO:0051188,GO:0071667,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 3.1.26.4,3.1.3.73 0.00000000003117 66.0
SYD3_k127_6265526_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000462 610.0
SYD3_k127_6265526_1 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005074 522.0
SYD3_k127_6265526_10 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000008021 59.0
SYD3_k127_6265526_2 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000001883 262.0
SYD3_k127_6265526_3 Smr domain - - - 0.000000000000000000000001741 105.0
SYD3_k127_6265526_4 Calx-beta domain - - - 0.0000000000000000000002165 108.0
SYD3_k127_6265526_5 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 - - 0.00000000000000000004131 103.0
SYD3_k127_6265526_6 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000001402 94.0
SYD3_k127_6265526_7 Serine aminopeptidase, S33 - - - 0.0000000000000005066 90.0
SYD3_k127_6265526_8 OsmC-like protein - - - 0.000000000002048 74.0
SYD3_k127_6265526_9 - - - - 0.000000008289 62.0
SYD3_k127_6379183_0 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K07083,K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 306.0
SYD3_k127_6379183_1 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003421 287.0
SYD3_k127_6379183_2 - - - - 0.00000003815 64.0
SYD3_k127_6379183_3 Domain of unknown function (DUF4149) - - - 0.00002157 56.0
SYD3_k127_6400494_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 8.669e-233 732.0
SYD3_k127_6400494_1 Belongs to the KdsA family K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 298.0
SYD3_k127_6400494_2 SNARE associated Golgi protein K03975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006844 286.0
SYD3_k127_6400494_3 HEAT repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002701 286.0
SYD3_k127_6400494_4 - - - - 0.000000000000000000000000000000000000000000000000001232 194.0
SYD3_k127_6400494_5 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000001323 190.0
SYD3_k127_6400494_6 - - - - 0.000000000000000000000000000000000000000000000004166 185.0
SYD3_k127_6400494_7 SNARE associated Golgi protein - - - 0.00000000008138 63.0
SYD3_k127_6494942_0 Arsenical pump membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004021 372.0
SYD3_k127_6494942_1 cAMP biosynthetic process K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007123 323.0
SYD3_k127_6494942_10 Transcriptional K07979 - - 0.00000000000000009103 85.0
SYD3_k127_6494942_11 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000001499 64.0
SYD3_k127_6494942_2 PFAM EAL domain - - - 0.000000000000000000000000000000000000000000000001996 191.0
SYD3_k127_6494942_3 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000004298 184.0
SYD3_k127_6494942_4 Domain of unknown function (DUF4126) - - - 0.00000000000000000000000000000000005975 154.0
SYD3_k127_6494942_5 TIGRFAM Diguanylate cyclase - - - 0.00000000000000000000000000000007781 140.0
SYD3_k127_6494942_6 HD domain K07814 - - 0.0000000000000000000000001803 110.0
SYD3_k127_6494942_7 signal transduction histidine kinase K07642 - 2.7.13.3 0.00000000000000000000002537 113.0
SYD3_k127_6494942_8 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000001365 110.0
SYD3_k127_6494942_9 helix_turn_helix, mercury resistance - - - 0.000000000000000001135 92.0
SYD3_k127_6516113_0 GTP binding K06883 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001289 278.0
SYD3_k127_6516113_1 receptor K16092 - - 0.00000000000000000000000001339 124.0
SYD3_k127_6516113_2 PFAM Stress-induced bacterial acidophilic repeat motif - - - 0.0000000000000000000000298 108.0
SYD3_k127_6516113_3 - - - - 0.0000000000000000000006331 99.0
SYD3_k127_6516113_4 Protein of unknown function (DUF2905) - - - 0.000000000000129 73.0
SYD3_k127_6557987_0 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 388.0
SYD3_k127_6557987_1 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576 2.9.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 352.0
SYD3_k127_6557987_2 TIGRFAM Pilus retraction protein PilT K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 355.0
SYD3_k127_6557987_3 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 345.0
SYD3_k127_6557987_4 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000131 219.0
SYD3_k127_6557987_5 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.000000000000000000000000000000000000001998 170.0
SYD3_k127_6557987_6 Psort location CytoplasmicMembrane, score - - - 0.0000000000001278 83.0
SYD3_k127_6557987_7 - - - - 0.000000003866 66.0
SYD3_k127_6557987_8 RNA processing - - - 0.00000007819 64.0
SYD3_k127_6557987_9 - - - - 0.0003155 53.0
SYD3_k127_6628238_0 Homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 486.0
SYD3_k127_6628238_1 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003613 423.0
SYD3_k127_6628238_2 cell redox homeostasis - - - 0.0000000000000000000000000001574 122.0
SYD3_k127_6628238_3 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000371 120.0
SYD3_k127_6628238_4 PFAM Helix-turn-helix, type 11 domain protein K13572 - - 0.00000000000000000009591 96.0
SYD3_k127_6628238_5 peroxiredoxin activity - - - 0.00000000008652 64.0
SYD3_k127_6629817_0 Uncharacterized membrane protein (DUF2298) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 586.0
SYD3_k127_6629817_1 PFAM amine oxidase K01854 - 5.4.99.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008707 411.0
SYD3_k127_6629817_10 PFAM NHL repeat containing protein - - - 0.0000000000000000000000000000003276 145.0
SYD3_k127_6629817_2 PFAM NHL repeat containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001573 308.0
SYD3_k127_6629817_3 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006129 304.0
SYD3_k127_6629817_4 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001251 246.0
SYD3_k127_6629817_5 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000004249 195.0
SYD3_k127_6629817_6 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000003421 202.0
SYD3_k127_6629817_7 - - - - 0.000000000000000000000000000000000000000000000003095 190.0
SYD3_k127_6629817_8 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000001074 140.0
SYD3_k127_6629817_9 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000001651 145.0
SYD3_k127_6643279_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372,K02567 - - 5.767e-264 831.0
SYD3_k127_6643279_1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 2.287e-235 780.0
SYD3_k127_6643279_10 abc-type fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.00000000000000000000000000000000000000000000000002881 201.0
SYD3_k127_6643279_11 PFAM secretion protein HlyD family protein K01993 - - 0.00000000000000000000000000000000000000000000104 181.0
SYD3_k127_6643279_13 PAP2 superfamily K19302 - 3.6.1.27 0.00000000003795 72.0
SYD3_k127_6643279_14 AefR-like transcriptional repressor, C-terminal region K18301 - - 0.00002656 54.0
SYD3_k127_6643279_2 Prolyl oligopeptidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 619.0
SYD3_k127_6643279_3 Pyruvate ferredoxin oxidoreductase beta subunit C terminal K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005898 464.0
SYD3_k127_6643279_4 ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009969 401.0
SYD3_k127_6643279_5 ATPase activity K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 337.0
SYD3_k127_6643279_6 COG0842 ABC-type multidrug transport system, permease component K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 303.0
SYD3_k127_6643279_7 DNA polymerase K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 296.0
SYD3_k127_6643279_8 xylan catabolic process - - - 0.0000000000000000000000000000000000000000000000000001142 208.0
SYD3_k127_6643279_9 PFAM GTP cyclohydrolase I Nitrile oxidoreductase K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000007244 191.0
SYD3_k127_6654884_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1034.0
SYD3_k127_6654884_1 Glycosyltransferase family 20 K00697 - 2.4.1.15,2.4.1.347 1.233e-297 939.0
SYD3_k127_6654884_10 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000001349 215.0
SYD3_k127_6654884_11 Cytochrome C assembly protein K02195 GO:0001539,GO:0002048,GO:0002049,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006518,GO:0006629,GO:0006643,GO:0006664,GO:0006807,GO:0006810,GO:0006928,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009237,GO:0009247,GO:0009636,GO:0009987,GO:0015886,GO:0016020,GO:0016021,GO:0016209,GO:0016491,GO:0016684,GO:0019184,GO:0019290,GO:0019748,GO:0031224,GO:0031226,GO:0034641,GO:0040011,GO:0042221,GO:0043043,GO:0043107,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044425,GO:0044459,GO:0044464,GO:0044550,GO:0046467,GO:0048870,GO:0050896,GO:0051179,GO:0051181,GO:0051186,GO:0051188,GO:0051234,GO:0051674,GO:0051716,GO:0055114,GO:0070887,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0071973,GO:0071975,GO:0071977,GO:0071978,GO:0097237,GO:0097588,GO:0098754,GO:0098869,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901678,GO:1903509,GO:1990748 - 0.000000000000000000000000000000000000000000000000000004254 198.0
SYD3_k127_6654884_12 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.000000000000000000000000000000000000000000000000001966 209.0
SYD3_k127_6654884_13 COGs COG1845 Heme copper-type cytochrome quinol oxidase subunit 3 K02276,K02299 - 1.9.3.1 0.00000000000000000000000000000000000000004376 159.0
SYD3_k127_6654884_14 Beta-lactamase enzyme family - - - 0.0000000000000000000000000000000000000004069 165.0
SYD3_k127_6654884_15 Cytochrome oxidase assembly protein K02259 - - 0.000000000000000000000000000000000000003576 161.0
SYD3_k127_6654884_16 Protein of unknown function (DUF420) K08976 - - 0.000000000000000000000000000000000000003711 153.0
SYD3_k127_6654884_17 PFAM ABC transporter related K02193 - 3.6.3.41 0.000000000000000000000000000000000009636 144.0
SYD3_k127_6654884_18 protein conserved in bacteria K09778 - - 0.0000000000000000000000000000000003959 140.0
SYD3_k127_6654884_19 CcmB protein K02194 - - 0.000000000000000000000000000000004089 139.0
SYD3_k127_6654884_2 PFAM Glycoside hydrolase 15-related K01178 - 3.2.1.3 1.011e-280 875.0
SYD3_k127_6654884_20 ACT domain K09707 - - 0.000000000000000000000002411 115.0
SYD3_k127_6654884_21 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000001387 104.0
SYD3_k127_6654884_22 Protein of unknown function (DUF3179) - - - 0.00000000000000002239 97.0
SYD3_k127_6654884_23 - - - - 0.000005633 53.0
SYD3_k127_6654884_3 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.788e-215 696.0
SYD3_k127_6654884_4 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 460.0
SYD3_k127_6654884_5 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 463.0
SYD3_k127_6654884_6 PFAM glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007255 368.0
SYD3_k127_6654884_7 MFS/sugar transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004522 372.0
SYD3_k127_6654884_8 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000068 265.0
SYD3_k127_6654884_9 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000005986 224.0
SYD3_k127_6766049_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005597 562.0
SYD3_k127_6766049_1 PFAM ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 448.0
SYD3_k127_6766049_2 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004479 463.0
SYD3_k127_6766049_3 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 318.0
SYD3_k127_6766049_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004362 293.0
SYD3_k127_6766049_5 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001037 276.0
SYD3_k127_6766049_6 copper resistance - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001566 268.0
SYD3_k127_6766049_7 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000003987 269.0
SYD3_k127_6766049_8 Outer membrane efflux protein - - - 0.00000000000000000005788 101.0
SYD3_k127_6897042_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.00000000000000004771 82.0
SYD3_k127_6897042_1 peptide catabolic process - - - 0.00000000000000005496 89.0
SYD3_k127_6897042_2 PIN domain - - - 0.00000000000000005724 89.0
SYD3_k127_6897042_3 Alpha beta hydrolase - - - 0.0000000000000002 89.0
SYD3_k127_6897042_4 Forkhead associated domain - - - 0.000000000006835 76.0
SYD3_k127_6897042_5 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000004804 57.0
SYD3_k127_6897042_7 oxidoreductase activity - - - 0.00005631 55.0
SYD3_k127_6897042_8 - - - - 0.00006664 48.0
SYD3_k127_6907982_0 PFAM UBA THIF-type NAD FAD binding K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 608.0
SYD3_k127_6907982_1 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 491.0
SYD3_k127_6907982_2 Pyridoxal-phosphate dependent enzyme K12339,K21148 - 2.5.1.113,2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005266 378.0
SYD3_k127_6907982_3 3-demethylubiquinone-9 3-O-methyltransferase activity K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000000000000000000001182 225.0
SYD3_k127_6907982_4 Amino acid permease K20265 - - 0.0000000000000000000000000000000000000000002385 166.0
SYD3_k127_6907982_5 Bacterial protein of unknown function (DUF937) - - - 0.0000000000000000000000000000000000000000007308 166.0
SYD3_k127_6907982_6 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000000004867 139.0
SYD3_k127_6907982_7 JAB/MPN domain K21140 - 3.13.1.6 0.000000000000000000000000000000007444 134.0
SYD3_k127_6907982_8 Methionine biosynthesis protein MetW - - - 0.0000000000000002745 87.0
SYD3_k127_6959765_0 Isocitrate lyase K01637 GO:0003674,GO:0003824,GO:0004451,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0006102,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046421,GO:0046487,GO:0071704,GO:0072350 4.1.3.1 0.0 1062.0
SYD3_k127_6959765_1 Malate synthase K01638 - 2.3.3.9 1.492e-298 932.0
SYD3_k127_6959765_11 Pfam Thioredoxin - - - 0.0002961 52.0
SYD3_k127_6959765_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378,K13380 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000421 509.0
SYD3_k127_6959765_3 protein-disulfide reductase activity K04084,K06196 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 403.0
SYD3_k127_6959765_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000006904 230.0
SYD3_k127_6959765_5 Represses a number of genes involved in the response to DNA damage (SOS response) K01356,K03503 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000008805 210.0
SYD3_k127_6959765_6 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000000005023 207.0
SYD3_k127_6959765_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K02573 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.0000000000000000000000000000000000000000001654 170.0
SYD3_k127_6959765_8 peptide deformylase activity K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.00000000000000000000000000000000001651 141.0
SYD3_k127_6959765_9 Resolvase - - - 0.0000009448 51.0
SYD3_k127_6981924_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1408.0
SYD3_k127_6981924_1 Cytochrome c oxidase, subunit I K02274 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 610.0
SYD3_k127_6981924_10 - - - - 0.00000000000000000000000000000000000001069 151.0
SYD3_k127_6981924_11 Cytochrome c - - - 0.000000000000000000000000000000005668 149.0
SYD3_k127_6981924_2 heavy metal translocating P-type ATPase K01533 - 3.6.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 597.0
SYD3_k127_6981924_3 glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006869 538.0
SYD3_k127_6981924_4 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 435.0
SYD3_k127_6981924_5 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 316.0
SYD3_k127_6981924_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006074 278.0
SYD3_k127_6981924_7 Trypsin - - - 0.00000000000000000000000000000000000000000000000000000000001203 211.0
SYD3_k127_6981924_8 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.0000000000000000000000000000000000000000000000000002868 197.0
SYD3_k127_6981924_9 cytochrome C oxidase subunit II K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000002048 173.0
SYD3_k127_6993583_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000057 446.0
SYD3_k127_6993583_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000001049 230.0
SYD3_k127_6993583_2 Organic solvent tolerance protein K04744 - - 0.000000000000000000000000000000000000005517 159.0
SYD3_k127_6993583_3 Methionine biosynthesis protein MetW K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000009443 143.0
SYD3_k127_6993583_4 DSBA-like thioredoxin domain - - - 0.000000000000000000000008059 110.0
SYD3_k127_6993583_5 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000000007118 89.0
SYD3_k127_7073757_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 4.726e-250 782.0
SYD3_k127_7073757_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007632 414.0
SYD3_k127_7073757_2 Zn-dependent metallo-hydrolase RNA specificity domain K12574 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 375.0
SYD3_k127_7073757_3 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004791 256.0
SYD3_k127_7073757_4 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000007259 183.0
SYD3_k127_7073757_5 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.0000000000000000000000000002428 121.0
SYD3_k127_7096341_0 Protoporphyrinogen oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 587.0
SYD3_k127_7096341_1 SMART Tetratricopeptide - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 366.0
SYD3_k127_7096341_10 - - - - 0.0004499 51.0
SYD3_k127_7096341_2 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004643 299.0
SYD3_k127_7096341_3 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002211 255.0
SYD3_k127_7096341_4 Lysylphosphatidylglycerol synthase TM region - - - 0.00000000000000000000000000000000000000000000000000000000000000002215 255.0
SYD3_k127_7096341_5 sequence-specific DNA binding K03719 - - 0.000000000000000000000000000000000000000000000000000005277 194.0
SYD3_k127_7096341_7 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000003144 149.0
SYD3_k127_7096341_8 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000002342 143.0
SYD3_k127_7096341_9 inositol 2-dehydrogenase activity - - - 0.000000000000004966 86.0
SYD3_k127_7108243_0 Carboxypeptidase regulatory-like domain - - - 1.609e-313 990.0
SYD3_k127_7108243_1 polyribonucleotide nucleotidyltransferase activity K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 1.406e-229 734.0
SYD3_k127_7108243_10 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.000000000000000000000000000000000000000000000000001275 194.0
SYD3_k127_7108243_11 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000001595 180.0
SYD3_k127_7108243_12 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000006936 154.0
SYD3_k127_7108243_13 - - - - 0.00000000000000000000000000000000002806 144.0
SYD3_k127_7108243_14 Zn peptidase - - - 0.0000000000000000000000000000000004643 146.0
SYD3_k127_7108243_15 STAS domain - - - 0.000000000000000000000000000000001255 132.0
SYD3_k127_7108243_16 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000007673 128.0
SYD3_k127_7108243_17 sigma factor antagonist activity K04757,K17752 - 2.7.11.1 0.0000000000000000000000000001886 119.0
SYD3_k127_7108243_18 Zincin-like metallopeptidase - - - 0.00000000000000000000000001321 119.0
SYD3_k127_7108243_19 - - - - 0.0000000000000000000004723 104.0
SYD3_k127_7108243_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 605.0
SYD3_k127_7108243_20 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000001235 91.0
SYD3_k127_7108243_21 polysaccharide deacetylase - - - 0.00000000000000001586 97.0
SYD3_k127_7108243_22 - - - - 0.000000000000001549 90.0
SYD3_k127_7108243_23 Protein of unknown function (DUF2905) - - - 0.000000000000006585 78.0
SYD3_k127_7108243_24 Protein of unknown function (DUF503) K09764 - - 0.0000000000004929 73.0
SYD3_k127_7108243_25 COG3209 Rhs family protein - - - 0.0000000002224 74.0
SYD3_k127_7108243_27 metal-dependent membrane protease K07052 - - 0.0002986 51.0
SYD3_k127_7108243_3 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 455.0
SYD3_k127_7108243_4 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004686 378.0
SYD3_k127_7108243_5 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 369.0
SYD3_k127_7108243_6 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004747 357.0
SYD3_k127_7108243_7 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 316.0
SYD3_k127_7108243_8 Hydrolase, TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000005283 215.0
SYD3_k127_7108243_9 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000001482 212.0
SYD3_k127_7117522_0 TIGRFAM FeS assembly protein SufB K09014 - - 1.357e-261 811.0
SYD3_k127_7117522_1 Aminotransferase class-V K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 562.0
SYD3_k127_7117522_10 SUF system FeS assembly protein, NifU family K04488 - - 0.000000000000000000000000000000000000000000000000000000003729 212.0
SYD3_k127_7117522_11 FeS assembly SUF system protein SufT - - - 0.000000000000000000000000000000000000000000000000000000005 207.0
SYD3_k127_7117522_12 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000002515 180.0
SYD3_k127_7117522_13 - - - - 0.000000000000000000000000000000000000000000000004429 197.0
SYD3_k127_7117522_14 Penicillinase repressor - - - 0.00000000000000000000000000000000000000006897 155.0
SYD3_k127_7117522_15 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000007375 147.0
SYD3_k127_7117522_16 DNA mismatch repair protein MutT K01515 - 3.6.1.13 0.000000000000000000000000000000001143 136.0
SYD3_k127_7117522_17 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000001151 123.0
SYD3_k127_7117522_18 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000001713 96.0
SYD3_k127_7117522_19 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.0000000000002336 74.0
SYD3_k127_7117522_2 Cytochrome P450 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004473 546.0
SYD3_k127_7117522_20 Participates in initiation and elongation during chromosome replication K02314,K02316 - 3.6.4.12 0.00000000001411 69.0
SYD3_k127_7117522_21 TPR repeat - - - 0.000007843 59.0
SYD3_k127_7117522_22 Protein tyrosine kinase K12132 - 2.7.11.1 0.00001362 59.0
SYD3_k127_7117522_23 BON domain K04065 - - 0.0003402 51.0
SYD3_k127_7117522_3 Domain of Unknown Function (DUF748) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 519.0
SYD3_k127_7117522_4 Lipase maturation factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 484.0
SYD3_k127_7117522_5 Uncharacterized protein family (UPF0051) K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006369 405.0
SYD3_k127_7117522_6 ABC transporter K09013 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0071840 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006071 379.0
SYD3_k127_7117522_7 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005731 304.0
SYD3_k127_7117522_8 PFAM Haloacid dehalogenase domain protein hydrolase K01560,K07025 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000006571 262.0
SYD3_k127_7117522_9 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000009181 240.0
SYD3_k127_7129179_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 1.171e-259 844.0
SYD3_k127_7129179_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004467 489.0
SYD3_k127_7129179_2 PASTA domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 447.0
SYD3_k127_7129179_3 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 357.0
SYD3_k127_7129179_4 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004019 292.0
SYD3_k127_7129179_5 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.00000000000000000000000000000000000000000000000008337 199.0
SYD3_k127_7129179_6 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000000000000007198 146.0
SYD3_k127_7129179_8 peptidylprolyl isomerase K03770 - 5.2.1.8 0.00000000003685 76.0
SYD3_k127_7129179_9 PFAM heat shock protein DnaJ K04082 - - 0.0001006 53.0
SYD3_k127_716827_0 proline dipeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008431 545.0
SYD3_k127_716827_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 469.0
SYD3_k127_716827_10 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000000000002934 173.0
SYD3_k127_716827_11 Peptidase family M50 K06402 - - 0.00000000000000000000000000000000000000000003263 169.0
SYD3_k127_716827_12 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000003842 165.0
SYD3_k127_716827_13 Belongs to the pseudouridine synthase RsuA family K06178,K06182 - 5.4.99.21,5.4.99.22 0.0000000000000000000000000000000000000000003097 163.0
SYD3_k127_716827_14 histone H2A K63-linked ubiquitination K10914 - - 0.00000000000000000000000000000000009764 145.0
SYD3_k127_716827_15 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000003069 149.0
SYD3_k127_716827_16 photosystem II stabilization K02237 - - 0.0000000000000000000000000000003842 138.0
SYD3_k127_716827_17 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.00000000000000000000000000000716 126.0
SYD3_k127_716827_18 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000001338 125.0
SYD3_k127_716827_19 HEAT repeats - - - 0.000000005607 68.0
SYD3_k127_716827_2 TIGRFAM tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 384.0
SYD3_k127_716827_20 Protein of unknown function (DUF3761) - - - 0.0000007393 61.0
SYD3_k127_716827_3 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008298 327.0
SYD3_k127_716827_4 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 305.0
SYD3_k127_716827_5 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000004406 235.0
SYD3_k127_716827_6 NAD(P)H-binding K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000009696 230.0
SYD3_k127_716827_7 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000007012 192.0
SYD3_k127_716827_8 carboxypeptidase activity K01297 - 3.4.17.13 0.0000000000000000000000000000000000000000000000000005342 195.0
SYD3_k127_716827_9 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000005112 180.0
SYD3_k127_7189796_0 PFAM carboxyl transferase K01969,K15052 - 2.1.3.15,6.4.1.3,6.4.1.4 2.16e-249 781.0
SYD3_k127_7189796_1 Biotin carboxylase C-terminal domain K01941,K01961 - 6.3.4.14,6.3.4.6,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008223 494.0
SYD3_k127_7189796_10 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000001436 201.0
SYD3_k127_7189796_11 - - - - 0.000000000000000000000000000000000000000000000000417 181.0
SYD3_k127_7189796_12 Belongs to the HAM1 NTPase family K02428 - 3.6.1.66 0.000000000000000000000000000000000000000001056 164.0
SYD3_k127_7189796_13 response regulator - - - 0.000000000000000000000000000000000000002844 160.0
SYD3_k127_7189796_14 Thiamine-binding protein - - - 0.000000000000000008308 87.0
SYD3_k127_7189796_15 acetyl propionyl-CoA carboxylase, alpha subunit K01968 - 6.4.1.4 0.000000000000344 82.0
SYD3_k127_7189796_16 TIGRFAM TonB family protein K03832 - - 0.000000001368 71.0
SYD3_k127_7189796_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003997 376.0
SYD3_k127_7189796_3 PFAM pyruvate carboxyltransferase K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 367.0
SYD3_k127_7189796_4 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 353.0
SYD3_k127_7189796_5 Amidinotransferase K01478 - 3.5.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003838 347.0
SYD3_k127_7189796_6 Amino acid kinase family K00926 - 2.7.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 329.0
SYD3_k127_7189796_7 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007375 291.0
SYD3_k127_7189796_8 PFAM Enoyl-CoA hydratase isomerase K13766,K15312 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000001306 264.0
SYD3_k127_7189796_9 methylmalonyl-CoA mutase C-terminal K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000004136 209.0
SYD3_k127_7224634_0 Belongs to the bacterial solute-binding protein 9 family K02077,K09815,K09818 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004268 346.0
SYD3_k127_7224634_1 ABC 3 transport family K02075 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 319.0
SYD3_k127_7224634_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 299.0
SYD3_k127_7224634_3 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000000000000000001883 182.0
SYD3_k127_7224634_4 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000006097 143.0
SYD3_k127_7224634_5 Pfam Cation efflux - - - 0.0000000000000007964 85.0
SYD3_k127_7224634_6 - - - - 0.00002044 53.0
SYD3_k127_7338293_0 4Fe-4S binding domain - - - 1.115e-248 801.0
SYD3_k127_7338293_1 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004799 409.0
SYD3_k127_7338293_10 MoaC family K03637 - 4.6.1.17 0.00000000000000000000000000000000000000003105 161.0
SYD3_k127_7338293_11 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000003594 162.0
SYD3_k127_7338293_12 Probable molybdopterin binding domain - - - 0.0000000000000000000000000000000000002778 147.0
SYD3_k127_7338293_13 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000004529 142.0
SYD3_k127_7338293_14 haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.00000000000000000000005391 110.0
SYD3_k127_7338293_15 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000002628 95.0
SYD3_k127_7338293_2 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 394.0
SYD3_k127_7338293_3 Protein of unknown function (DUF1343) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 396.0
SYD3_k127_7338293_4 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007928 322.0
SYD3_k127_7338293_5 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K01497,K02858,K14652 GO:0003674,GO:0003824,GO:0003933,GO:0003935,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0008686,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0016829,GO:0016830,GO:0017144,GO:0018130,GO:0019238,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000003969 264.0
SYD3_k127_7338293_6 stress-induced mitochondrial fusion - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002197 272.0
SYD3_k127_7338293_7 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001038 262.0
SYD3_k127_7338293_8 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.000000000000000000000000000000000000000000000000000000000006245 213.0
SYD3_k127_7338293_9 adenylosuccinate lyase K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000001119 197.0
SYD3_k127_7370012_0 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000436 333.0
SYD3_k127_7370012_1 - - - - 0.0000000002006 66.0
SYD3_k127_7404335_0 ligase activity, forming nitrogen-metal bonds K02230 - 6.6.1.2 0.0 1362.0
SYD3_k127_7404335_1 ABC1 family K03688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 607.0
SYD3_k127_7404335_10 - - - - 0.0000000000000000000000000000000000000000000000008716 192.0
SYD3_k127_7404335_11 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.000000000000000000000000002823 114.0
SYD3_k127_7404335_12 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749,K04757 - 2.7.11.1 0.000000000000000000000003912 109.0
SYD3_k127_7404335_13 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.000000000000000000003135 95.0
SYD3_k127_7404335_14 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749,K06378 - - 0.000000000000004682 79.0
SYD3_k127_7404335_16 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.0006436 46.0
SYD3_k127_7404335_2 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004188 422.0
SYD3_k127_7404335_3 Serine phosphatase RsbU, regulator of sigma subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 358.0
SYD3_k127_7404335_4 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008585 288.0
SYD3_k127_7404335_5 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000001632 223.0
SYD3_k127_7404335_6 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000004365 201.0
SYD3_k127_7404335_7 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000179 205.0
SYD3_k127_7404335_8 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000002631 190.0
SYD3_k127_7404335_9 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000001209 187.0
SYD3_k127_7404829_0 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008633 347.0
SYD3_k127_7404829_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 332.0
SYD3_k127_7404829_2 Tetratricopeptide repeat - - - 0.0000001428 64.0
SYD3_k127_7462125_0 S-adenosyl-L-homocysteine hydrolase K01251 - 3.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008418 513.0
SYD3_k127_7462125_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005711 462.0
SYD3_k127_7462125_2 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003493 407.0
SYD3_k127_7462125_3 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000008821 232.0
SYD3_k127_7462125_4 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.000000000004118 71.0
SYD3_k127_7462125_5 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.00000000003448 74.0
SYD3_k127_7497068_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 5.464e-288 908.0
SYD3_k127_7497068_1 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004731,GO:0006082,GO:0006139,GO:0006144,GO:0006168,GO:0006520,GO:0006555,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009112,GO:0009113,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0017061,GO:0017144,GO:0018130,GO:0019438,GO:0019509,GO:0019752,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0055086,GO:0071265,GO:0071267,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002836 332.0
SYD3_k127_7497068_10 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000335 145.0
SYD3_k127_7497068_11 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000004459 136.0
SYD3_k127_7497068_12 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000003647 123.0
SYD3_k127_7497068_13 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.00000000000000000000000000019 120.0
SYD3_k127_7497068_14 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000001162 119.0
SYD3_k127_7497068_15 - - - - 0.0000000000000000000000001671 120.0
SYD3_k127_7497068_16 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 - 0.000000000000000000001988 111.0
SYD3_k127_7497068_17 TonB C terminal K03646,K03832 - - 0.00000000000000006198 90.0
SYD3_k127_7497068_18 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000608 67.0
SYD3_k127_7497068_19 PFAM Transglutaminase-like - - - 0.0000000008873 70.0
SYD3_k127_7497068_2 PFAM PfkB domain protein K00856 - 2.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009837 325.0
SYD3_k127_7497068_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008107 314.0
SYD3_k127_7497068_4 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001181 284.0
SYD3_k127_7497068_5 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.00000000000000000000000000000000000000000000000000000000000000000000000002213 267.0
SYD3_k127_7497068_6 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003489 265.0
SYD3_k127_7497068_7 SpoIVB peptidase S55 - - - 0.000000000000000000000000000000000000000000000000000000000000002441 241.0
SYD3_k127_7497068_8 PFAM MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000000000000000000000000000000000000003778 211.0
SYD3_k127_7497068_9 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372,K16363 - 3.5.1.108,4.2.1.59 0.0000000000000000000000000000000000000000000000000002298 190.0
SYD3_k127_7541055_0 Involved in the tonB-independent uptake of proteins - - - 2.542e-235 756.0
SYD3_k127_7541055_1 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000006619 270.0
SYD3_k127_7541055_2 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000008827 187.0
SYD3_k127_7541055_3 Protein of unknown function (DUF971) K03593 - - 0.0000000000000000000000000002833 116.0
SYD3_k127_7551706_0 Involved in the tonB-independent uptake of proteins - - - 2.934e-232 746.0
SYD3_k127_7551706_1 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 332.0
SYD3_k127_7551706_2 Protein of unknown function (DUF4242) - - - 0.0000000000000000000000000000000002247 133.0
SYD3_k127_7551706_3 Transcriptional regulator - - - 0.000000000000000001126 97.0
SYD3_k127_7551706_4 Plasmid stability protein K21495 - - 0.0000005419 54.0
SYD3_k127_7558532_0 A G-specific K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000003977 260.0
SYD3_k127_7558532_1 benzoyl-CoA oxygenase K15512 - 1.14.13.208 0.0000000000000000000000000000000000000000000000000000000002303 218.0
SYD3_k127_7558532_2 hydrolase activity, acting on ester bonds - - - 0.000000000000000000000000000000000004531 146.0
SYD3_k127_7558532_3 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000382 133.0
SYD3_k127_7558532_4 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000001843 61.0
SYD3_k127_7558532_5 Uncharacterised protein family (UPF0158) - - - 0.0005274 48.0
SYD3_k127_7576024_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 1.494e-217 690.0
SYD3_k127_7576024_1 intramolecular transferase activity, transferring amino groups K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 488.0
SYD3_k127_7576024_2 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 432.0
SYD3_k127_7576024_3 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008475 298.0
SYD3_k127_7576024_4 Porphobilinogen deaminase, dipyromethane cofactor binding domain K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000001221 251.0
SYD3_k127_7576024_5 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000007377 160.0
SYD3_k127_7576024_6 cytochrome C assembly protein - - - 0.000000000000000001716 96.0
SYD3_k127_7576024_7 PFAM Uroporphyrinogen III synthase HEM4 K01719 - 4.2.1.75 0.0000006427 59.0
SYD3_k127_7592753_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 433.0
SYD3_k127_7592753_1 PFAM response regulator receiver K07665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000905 237.0
SYD3_k127_7592753_2 Histidine kinase K07644 - 2.7.13.3 0.0000000000000000000000000000000000000000000000006949 189.0
SYD3_k127_7592753_3 Peptidase C26 K07010 - - 0.00000000000000000000000000000000000000001238 161.0
SYD3_k127_7592753_4 SnoaL-like domain - - - 0.0000000000000000000000000007722 120.0
SYD3_k127_7592753_5 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000004652 113.0
SYD3_k127_7601193_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0 1943.0
SYD3_k127_7601193_1 His Kinase A (phosphoacceptor) domain K02484 - 2.7.13.3 9.7e-214 694.0
SYD3_k127_7601193_2 Beta-eliminating lyase K01667 - 4.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 582.0
SYD3_k127_7601193_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 373.0
SYD3_k127_7601193_4 Sodium:sulfate symporter transmembrane region K03319,K09477,K11106,K14445 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 361.0
SYD3_k127_7601193_5 phosphorelay signal transduction system - - - 0.00000000000000000000000000002167 122.0
SYD3_k127_7601193_6 - - - - 0.00000000000000000000000002379 118.0
SYD3_k127_7601193_7 Family of unknown function (DUF5329) - - - 0.0000000000000001372 89.0
SYD3_k127_7601193_8 thiamine biosynthesis protein ThiS K03154 - - 0.0000000000004071 83.0
SYD3_k127_7601193_9 Common central domain of tyrosinase K00505 - 1.14.18.1 0.0003875 52.0
SYD3_k127_7730916_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 391.0
SYD3_k127_7730916_1 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000004597 233.0
SYD3_k127_7730916_2 Transmembrane secretion effector K08225 - - 0.00000000000000000000000000000000000002319 149.0
SYD3_k127_7730916_3 ABC transporter K01990 - - 0.00008099 55.0
SYD3_k127_7737221_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004725 509.0
SYD3_k127_7737221_1 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006104 494.0
SYD3_k127_7737221_2 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.000000000000000000000001041 109.0
SYD3_k127_7737221_3 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000001163 69.0
SYD3_k127_776166_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.626e-198 628.0
SYD3_k127_776166_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003499 591.0
SYD3_k127_776166_2 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 389.0
SYD3_k127_776166_3 peptidase M24B X-Pro dipeptidase aminopeptidase domain protein K01262 - 3.4.11.9 0.000000000000000004762 87.0
SYD3_k127_776166_4 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000003502 72.0
SYD3_k127_7764879_0 PFAM Pyridoxal-dependent decarboxylase K01593 - 4.1.1.105,4.1.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 401.0
SYD3_k127_7764879_1 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 354.0
SYD3_k127_7764879_2 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 303.0
SYD3_k127_7764879_3 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.000000000000000000000000000000000000002174 169.0
SYD3_k127_7777199_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000962 495.0
SYD3_k127_7777199_1 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 291.0
SYD3_k127_7777199_2 Amidohydrolase family - - - 0.00000000000000000000006239 113.0
SYD3_k127_7777199_3 BON domain K04065 - - 0.0000000954 62.0
SYD3_k127_7777199_4 periplasmic or secreted lipoprotein - - - 0.000246 53.0
SYD3_k127_7883370_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008077 522.0
SYD3_k127_7883370_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00260 - 1.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003295 479.0
SYD3_k127_7883370_2 Amidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 438.0
SYD3_k127_7883370_3 Proton-conducting membrane transporter K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004288 309.0
SYD3_k127_7883370_4 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.00000000000000000000000000000000000000000000006785 181.0
SYD3_k127_7883370_5 Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation K07130 GO:0003674,GO:0003824,GO:0004061,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043167,GO:0043169,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.00000000000000000000000000000000003172 148.0
SYD3_k127_7883370_6 PFAM Uncharacterised protein family (UPF0227) K07000 - - 0.00000000000000000001478 100.0
SYD3_k127_7883370_7 - - - - 0.00000000947 67.0
SYD3_k127_7883370_8 - - - - 0.0000002783 63.0
SYD3_k127_7888185_0 Glycosyltransferase family 20 K00697 - 2.4.1.15,2.4.1.347 1.282e-289 909.0
SYD3_k127_7888185_1 PFAM Glycoside hydrolase 15-related K01178 - 3.2.1.3 5.079e-271 850.0
SYD3_k127_7888185_2 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 459.0
SYD3_k127_7888185_3 MFS/sugar transport protein - - - 0.0000000000000000000000000000000000000000000000000000000203 204.0
SYD3_k127_7888185_4 hydroperoxide reductase activity - - - 0.00000000000000000000004347 110.0
SYD3_k127_7891737_0 PFAM Na-Ca exchanger integrin-beta4 peptidase-like FG-GAP K20276 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006679 291.0
SYD3_k127_7891737_1 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000002302 183.0
SYD3_k127_7891737_2 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.00000000000000000000000000000001015 131.0
SYD3_k127_7891737_3 PFAM RNA recognition motif - - - 0.00000000000000000000000000558 112.0
SYD3_k127_7891737_4 Cupin domain - - - 0.0000000000005757 76.0
SYD3_k127_7891737_5 Belongs to the peptidase S8 family K20276 - - 0.0000000000007189 83.0
SYD3_k127_7928362_0 glycosyl hydrolase, BNR repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001453 297.0
SYD3_k127_7928362_1 Bacterial regulatory proteins, tetR family K16137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001022 247.0
SYD3_k127_7928362_2 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000004362 139.0
SYD3_k127_7966828_0 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009997 336.0
SYD3_k127_7966828_1 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 309.0
SYD3_k127_7966828_2 PFAM LemA family protein K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002164 250.0
SYD3_k127_7966828_3 TPM domain K06872 - - 0.000000000000000000000000000000000000000000000000004816 195.0
SYD3_k127_7966828_4 TPM domain - - - 0.0000000000000000000000000000000000001417 149.0
SYD3_k127_7966828_5 phosphohistidine phosphatase K08296 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0071704,GO:1901564 - 0.00000000000000001592 88.0
SYD3_k127_7967438_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 435.0
SYD3_k127_7967438_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002422 406.0
SYD3_k127_7967438_2 involved in signal transduction (via phosphorylation) involved in transcriptional regulatory mechanism and in the regulation of secondary metabolites catalytic activity ATP a protein ADP a phosphoprotein K08282 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 411.0
SYD3_k127_7967438_3 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004102 269.0
SYD3_k127_7969482_0 Carbamoyl-phosphate synthetase large chain domain protein K01955 - 6.3.5.5 0.0 1326.0
SYD3_k127_7969482_1 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 7.023e-207 668.0
SYD3_k127_7969482_10 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004513 274.0
SYD3_k127_7969482_11 Belongs to the MEMO1 family K06990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001513 247.0
SYD3_k127_7969482_12 PFAM Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000003684 245.0
SYD3_k127_7969482_13 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000006141 232.0
SYD3_k127_7969482_14 Gtr1/RagA G protein conserved region K06883 - - 0.0000000000000000000000000000000000000000000000000000000005815 217.0
SYD3_k127_7969482_15 Peptidase S53 propeptide K08677 - - 0.0000000000000000000000000000000000000000000000000000000009068 222.0
SYD3_k127_7969482_16 Transporter associated domain K06189 - - 0.000000000000000000000000000000000000000000000000000000001906 218.0
SYD3_k127_7969482_17 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000001139 199.0
SYD3_k127_7969482_18 guanosine tetraphosphate metabolic process K07816 - 2.7.6.5 0.000000000000000000000000000000000000000005023 177.0
SYD3_k127_7969482_19 Universal stress protein family - - - 0.0000000000000000000001022 108.0
SYD3_k127_7969482_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 622.0
SYD3_k127_7969482_20 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000007077 103.0
SYD3_k127_7969482_21 PFAM Uncharacterised protein family (UPF0104) K07027 - - 0.00000000000000000006262 102.0
SYD3_k127_7969482_22 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000004158 80.0
SYD3_k127_7969482_23 endoglucanase-related protein, glucosyl hydrolase family 9 protein - - - 0.00000000000335 76.0
SYD3_k127_7969482_24 O-Antigen ligase - - - 0.00000000004515 77.0
SYD3_k127_7969482_3 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005243 462.0
SYD3_k127_7969482_4 7TM-HD extracellular K07037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006351 437.0
SYD3_k127_7969482_5 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 383.0
SYD3_k127_7969482_6 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005739 392.0
SYD3_k127_7969482_7 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005841 371.0
SYD3_k127_7969482_8 PhoH-like protein K06217 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 355.0
SYD3_k127_7969482_9 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006443 356.0
SYD3_k127_797350_0 Pyruvate formate lyase-activating protein K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006055 570.0
SYD3_k127_797350_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 296.0
SYD3_k127_797350_2 Helix-hairpin-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004486 250.0
SYD3_k127_797350_3 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.00000000000000000000000000000000000000000000000000000000001248 215.0
SYD3_k127_797350_4 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000004973 131.0
SYD3_k127_7985407_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 8.342e-199 649.0
SYD3_k127_7985407_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000003352 252.0
SYD3_k127_8070295_0 Belongs to the CinA family K03742,K03743 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 309.0
SYD3_k127_8070295_1 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006095 279.0
SYD3_k127_8070295_2 Histidine kinase - - - 0.00000000000000000000000000000000000006542 158.0
SYD3_k127_8070295_3 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000008442 151.0
SYD3_k127_8070295_4 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000003903 115.0
SYD3_k127_8070295_5 COG0784 FOG CheY-like receiver - - - 0.00000000000000000001082 105.0
SYD3_k127_8102824_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.0 1232.0
SYD3_k127_8102824_1 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004077 619.0
SYD3_k127_8102824_10 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000401 153.0
SYD3_k127_8102824_11 Dioxygenase K03381 - 1.13.11.1 0.00000000000000000000000000000000000001007 153.0
SYD3_k127_8102824_12 - - - - 0.0000000000000000000000000000000000004446 143.0
SYD3_k127_8102824_13 phosphatase activity K07025 - - 0.0000000000000000000000000000002735 139.0
SYD3_k127_8102824_14 Molybdopterin converting factor subunit K03635,K21142 - 2.8.1.12 0.0000000000000000000000000000003512 128.0
SYD3_k127_8102824_15 - - - - 0.00000000000000000000000249 104.0
SYD3_k127_8102824_16 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000002114 110.0
SYD3_k127_8102824_17 - - - - 0.00000000000000000001843 93.0
SYD3_k127_8102824_18 - - - - 0.0001023 50.0
SYD3_k127_8102824_2 PFAM Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 595.0
SYD3_k127_8102824_3 Belongs to the aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004467 558.0
SYD3_k127_8102824_4 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 372.0
SYD3_k127_8102824_5 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007475 364.0
SYD3_k127_8102824_6 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008135 340.0
SYD3_k127_8102824_7 short-chain dehydrogenase K13774 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000196 288.0
SYD3_k127_8102824_8 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137 GO:0005575,GO:0005576 1.3.3.11 0.00000000000000000000000000000000000000000000000000000001608 211.0
SYD3_k127_8102824_9 Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000005361 200.0
SYD3_k127_8130759_0 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.000000000000000000000000000000000000000000000000000003458 198.0
SYD3_k127_8130759_1 KR domain K07535 - - 0.000000000000000000000000000000000000000000000001313 191.0
SYD3_k127_8130759_10 - - - - 0.0001428 55.0
SYD3_k127_8130759_2 - - - - 0.0000000000000000000000000000001479 141.0
SYD3_k127_8130759_3 response to heat K07090 - - 0.0000000000000000000000000000003966 128.0
SYD3_k127_8130759_4 Putative esterase - - - 0.00000000000000000000000000001213 132.0
SYD3_k127_8130759_5 glycolate biosynthetic process K01091 - 3.1.3.18 0.000000000000000000000006866 106.0
SYD3_k127_8130759_6 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000006058 90.0
SYD3_k127_8130759_7 4-amino-4-deoxy-L-arabinose transferase activity K14340 - - 0.000000000005427 78.0
SYD3_k127_8130759_8 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000004751 54.0
SYD3_k127_8130759_9 - - - - 0.0000009893 57.0
SYD3_k127_8177390_0 glycosyl transferase group 1 K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007704 407.0
SYD3_k127_8177390_1 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 311.0
SYD3_k127_8177390_10 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000001691 73.0
SYD3_k127_8177390_11 Preprotein translocase SecG subunit K03075 - - 0.000002813 54.0
SYD3_k127_8177390_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009571 277.0
SYD3_k127_8177390_4 PFAM GlcNAc-PI de-N-acetylase K01463 - - 0.000000000000000000000000000000000000000000000000000000000008206 219.0
SYD3_k127_8177390_5 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism K01488 - 3.5.4.4 0.0000000000000000000000000000000000000000000000000000009791 205.0
SYD3_k127_8177390_6 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000002566 184.0
SYD3_k127_8177390_7 Bacillithiol biosynthesis BshC K22136 - - 0.000000000000000000000000000000000000003405 164.0
SYD3_k127_8177390_8 - - - - 0.00000000000000000000000000006836 128.0
SYD3_k127_8177390_9 TIGRFAM VWFA-related Acidobacterial domain - - - 0.000000000000000000000000001863 129.0
SYD3_k127_8198382_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000345 490.0
SYD3_k127_8198382_1 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005622 470.0
SYD3_k127_8198382_10 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.000000000000000000000000000001272 132.0
SYD3_k127_8198382_11 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000002015 94.0
SYD3_k127_8198382_12 - - - - 0.00000000000196 78.0
SYD3_k127_8198382_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 421.0
SYD3_k127_8198382_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005354 392.0
SYD3_k127_8198382_4 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000008365 224.0
SYD3_k127_8198382_5 protein homotetramerization - GO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005267,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015267,GO:0015318,GO:0015672,GO:0016043,GO:0022607,GO:0022803,GO:0022838,GO:0022840,GO:0022841,GO:0022842,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0043933,GO:0044085,GO:0046873,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055085,GO:0065003,GO:0071804,GO:0071805,GO:0071840,GO:0098655,GO:0098660,GO:0098662 - 0.00000000000000000000000000000000000000000000000008005 185.0
SYD3_k127_8198382_6 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000001672 176.0
SYD3_k127_8198382_7 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.00000000000000000000000000000000000000000000029 174.0
SYD3_k127_8198382_8 oxidoreductase activity K12511 - - 0.000000000000000000000000000000000000009719 157.0
SYD3_k127_8198382_9 Thioesterase superfamily K10806 - - 0.0000000000000000000000000000002912 126.0
SYD3_k127_8233243_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 610.0
SYD3_k127_8233243_1 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005831 560.0
SYD3_k127_8233243_10 Phosphate-selective porin O and P K07221 - - 0.00000000000000000000000000000000000000000000005587 173.0
SYD3_k127_8233243_11 Putative glycolipid-binding K09957 - - 0.000000000000000000000000000000000000006077 166.0
SYD3_k127_8233243_12 - - - - 0.00000000000000000000000000000000000002306 151.0
SYD3_k127_8233243_13 synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000006721 123.0
SYD3_k127_8233243_14 Protein of unknown function (DUF763) K09003 - - 0.000000007226 61.0
SYD3_k127_8233243_2 Glycosyl hydrolase family 47 K01230 - 3.2.1.113 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005986 513.0
SYD3_k127_8233243_3 fructose-bisphosphate aldolase activity K01624 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 462.0
SYD3_k127_8233243_4 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 424.0
SYD3_k127_8233243_5 amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009612 402.0
SYD3_k127_8233243_6 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004919 325.0
SYD3_k127_8233243_7 alcohol dehydrogenase K00060 - 1.1.1.103 0.00000000000000000000000000000000000000000000000000000000000000000000006025 269.0
SYD3_k127_8233243_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000001371 252.0
SYD3_k127_8233243_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000513 244.0
SYD3_k127_8240202_0 ATP-dependent helicase nuclease subunit A K16898 - 3.6.4.12 1.937e-213 701.0
SYD3_k127_8240202_1 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000953 338.0
SYD3_k127_8240202_2 eRF1 domain 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002239 264.0
SYD3_k127_8240202_3 Protein of unknown function (DUF3313) - - - 0.000000000000000000000000000000000001595 148.0
SYD3_k127_8240202_4 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000008032 126.0
SYD3_k127_8240202_5 - - - - 0.000000000000000000000000003632 129.0
SYD3_k127_8246066_0 - - - - 2.523e-298 933.0
SYD3_k127_8246066_1 Alpha-amylase domain K01176 - 3.2.1.1 1.13e-215 681.0
SYD3_k127_8246066_2 Sugar ABC transporter permease K10109,K15770,K15771 - - 1.164e-194 625.0
SYD3_k127_8246066_3 Bacterial extracellular solute-binding protein K10108,K15770 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002514 571.0
SYD3_k127_8246066_4 Belongs to the ABC transporter superfamily K05816,K10112 - 3.6.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 529.0
SYD3_k127_8246066_5 Binding-protein-dependent transport system inner membrane component K10110,K15772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 455.0
SYD3_k127_8246066_6 C-terminal binding-module, SLH-like, of glucodextranase K01178 - 3.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 367.0
SYD3_k127_8246066_7 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000001822 242.0
SYD3_k127_8248875_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 1.283e-209 680.0
SYD3_k127_8248875_1 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 GO:0005575,GO:0005576 - 0.000000000000000000000000000000000000000001202 165.0
SYD3_k127_8248875_2 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000002789 161.0
SYD3_k127_8248875_3 - - - - 0.00000000000001758 76.0
SYD3_k127_829782_0 IgA Peptidase M64 - - - 1.457e-217 683.0
SYD3_k127_829782_1 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236 578.0
SYD3_k127_829782_2 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009238 254.0
SYD3_k127_829782_3 Kdo2-lipid A biosynthetic process K02517,K20543,K22311 - 2.3.1.241,2.3.1.265 0.000000000000000000006727 106.0
SYD3_k127_829782_4 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000000000004593 76.0
SYD3_k127_8308163_0 Phospholipase D. Active site motifs. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 591.0
SYD3_k127_8308163_1 PFAM sigma-54 factor interaction domain-containing protein K00575,K12266 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 531.0
SYD3_k127_8308163_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000306 222.0
SYD3_k127_8308163_3 Lipase (class 3) K01046 - 3.1.1.3 0.00000000000000000000000000000000000000000000000000001481 209.0
SYD3_k127_8308163_4 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.0000000000000000000000000000000000002341 143.0
SYD3_k127_8308163_5 response to pH - - - 0.000000000000000000000000000000002159 147.0
SYD3_k127_8308163_8 Protein of unknown function (DUF2283) - - - 0.0002839 44.0
SYD3_k127_8339817_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 389.0
SYD3_k127_8339817_1 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001147 280.0
SYD3_k127_8339817_10 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000001622 68.0
SYD3_k127_8339817_2 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000006231 253.0
SYD3_k127_8339817_3 Kdo2-lipid A biosynthetic process K02517,K22311 GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016746,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.3.1.241,2.3.1.265 0.000000000000000000000000000000000000000000000000000000000000000000003142 247.0
SYD3_k127_8339817_4 MazG nucleotide pyrophosphohydrolase domain K02428,K02499,K04765 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.66,3.6.1.9 0.0000000000000000000000000000000000000000000000000000000000001004 221.0
SYD3_k127_8339817_5 Divergent polysaccharide deacetylase K09798 - - 0.0000000000000000000000000000000000000000000004026 178.0
SYD3_k127_8339817_6 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000008886 174.0
SYD3_k127_8339817_7 Peptidase M23 - - - 0.000000000000000000000000000000002104 145.0
SYD3_k127_8339817_8 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000003647 123.0
SYD3_k127_8339817_9 Domain of unknown function (DUF1844) - - - 0.00000000006122 74.0
SYD3_k127_8345732_0 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 586.0
SYD3_k127_8345732_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001828 230.0
SYD3_k127_8345732_2 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000001458 191.0
SYD3_k127_8345732_3 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0016618,GO:0030267,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.1.1.26 0.00000000000000000000000000000000000001253 151.0
SYD3_k127_8345732_4 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000003187 132.0
SYD3_k127_8345732_5 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.000000000000000000000000006288 126.0
SYD3_k127_8345732_6 Roadblock/LC7 domain - - - 0.000004728 58.0
SYD3_k127_8345732_7 Tetratricopeptide repeat - - - 0.0001279 52.0
SYD3_k127_8353309_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 7.079e-254 812.0
SYD3_k127_8353309_1 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 1.614e-228 716.0
SYD3_k127_8353309_10 Phospholipase D. Active site motifs. K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 375.0
SYD3_k127_8353309_11 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 375.0
SYD3_k127_8353309_12 helix_turn_helix gluconate operon transcriptional repressor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 368.0
SYD3_k127_8353309_13 Phospholipase D Transphosphatidylase K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 356.0
SYD3_k127_8353309_14 Initiation factor 2 subunit family K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 346.0
SYD3_k127_8353309_15 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 331.0
SYD3_k127_8353309_16 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 304.0
SYD3_k127_8353309_17 PFAM Acetyltransferase (GNAT) family K06976 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001272 273.0
SYD3_k127_8353309_18 DNA polymerase III subunit epsilon K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000002476 240.0
SYD3_k127_8353309_19 Belongs to the bacterial glucokinase family K00845 GO:0003674,GO:0003824,GO:0004340,GO:0004396,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019200,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0051156,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000002824 238.0
SYD3_k127_8353309_2 Phospholipase D Transphosphatidylase K06131 - - 8.74e-206 647.0
SYD3_k127_8353309_20 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000007579 225.0
SYD3_k127_8353309_21 5'-nucleotidase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000009051 231.0
SYD3_k127_8353309_22 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000002791 218.0
SYD3_k127_8353309_23 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000009356 192.0
SYD3_k127_8353309_24 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000002134 194.0
SYD3_k127_8353309_25 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000723 188.0
SYD3_k127_8353309_26 - - - - 0.0000000000000000000000000000000000000000000163 180.0
SYD3_k127_8353309_27 peroxiredoxin activity - - - 0.000000000000000000000000000000000000000209 164.0
SYD3_k127_8353309_28 Low affinity iron permease - - - 0.000000000000000000000000000000000000001438 153.0
SYD3_k127_8353309_29 PFAM Helix-turn-helix, type 11 domain protein K13572 - - 0.0000000000000000000000000000000000002191 154.0
SYD3_k127_8353309_3 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007523 498.0
SYD3_k127_8353309_30 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000006901 124.0
SYD3_k127_8353309_31 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000000000000004053 110.0
SYD3_k127_8353309_32 cell redox homeostasis - - - 0.000000000000000000000001533 116.0
SYD3_k127_8353309_33 Preprotein translocase SecG subunit K03075 - - 0.00000000000000005932 85.0
SYD3_k127_8353309_34 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000002328 72.0
SYD3_k127_8353309_35 DoxX K16937 - 1.8.5.2 0.000000007065 63.0
SYD3_k127_8353309_36 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0000006151 61.0
SYD3_k127_8353309_4 Homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004753 487.0
SYD3_k127_8353309_5 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 472.0
SYD3_k127_8353309_6 Protein of unknown function (DUF1015) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000057 435.0
SYD3_k127_8353309_7 Belongs to the phosphoglycerate kinase family K00927,K01803 - 2.7.2.3,5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005409 419.0
SYD3_k127_8353309_8 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008279 418.0
SYD3_k127_8353309_9 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 380.0
SYD3_k127_8379464_0 Tricorn protease homolog - - - 3.75e-249 786.0
SYD3_k127_8379464_1 Bacterial protein of unknown function (DUF885) - - - 5.373e-240 756.0
SYD3_k127_8379464_10 Trypsin - - - 0.000000000000000000000000000000002118 143.0
SYD3_k127_8379464_11 Thioredoxin-like - - - 0.0000000000000000000000000000486 126.0
SYD3_k127_8379464_12 protein-disulfide reductase activity K04084 - 1.8.1.8 0.000000000005955 77.0
SYD3_k127_8379464_2 Aldo Keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 390.0
SYD3_k127_8379464_3 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 354.0
SYD3_k127_8379464_4 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001906 244.0
SYD3_k127_8379464_5 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000001632 204.0
SYD3_k127_8379464_6 Protein of unknown function (DUF1203) - - - 0.000000000000000000000000000000000000000009893 159.0
SYD3_k127_8379464_7 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.00000000000000000000000000000000000000006802 156.0
SYD3_k127_8379464_8 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0000000000000000000000000000000000004101 156.0
SYD3_k127_8379464_9 Protein of unknown function (DUF3570) - - - 0.00000000000000000000000000000000004116 150.0
SYD3_k127_8415077_0 beta-lactamase - - - 4.896e-220 704.0
SYD3_k127_8415077_1 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 289.0
SYD3_k127_8415077_2 translation initiation inhibitor, yjgF family K04782 - 4.2.99.21 0.00000000000000000000000000000000000000001069 165.0
SYD3_k127_8415077_3 Outer membrane receptor K02014,K16087 - - 0.0000000000000000000000005437 123.0
SYD3_k127_8424994_0 Belongs to the MurCDEF family K01924 GO:0000166,GO:0000270,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008763,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034645,GO:0035639,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0046872,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005319 503.0
SYD3_k127_8424994_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0030554,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008647 436.0
SYD3_k127_8424994_2 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003629 372.0
SYD3_k127_8424994_3 PFAM aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002829 263.0
SYD3_k127_8424994_4 - - - - 0.0000000000000000000000000000000000000000000000000000002227 204.0
SYD3_k127_8424994_5 hyperosmotic response - - - 0.0000000000000000000005552 106.0
SYD3_k127_8424994_6 Domain of unknown function (DUF3597) - - - 0.00000003577 62.0
SYD3_k127_8424994_7 Cell division protein FtsQ K03589 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0071944 - 0.000001124 59.0
SYD3_k127_8424994_9 Protein of unknown function (DUF454) K09790 - - 0.0006324 48.0
SYD3_k127_8426267_0 4Fe-4S single cluster domain K06937 - - 4.364e-253 800.0
SYD3_k127_8426267_1 GTP-binding protein TypA K06207 - - 2.585e-198 636.0
SYD3_k127_8426267_10 Translation initiation factor K03113 - - 0.00000000000000003564 89.0
SYD3_k127_8426267_11 mttA/Hcf106 family K03116 - - 0.00000000448 68.0
SYD3_k127_8426267_12 PFAM helix-turn-helix, Fis-type - - - 0.000008735 54.0
SYD3_k127_8426267_13 protein domain associated with - - - 0.00001109 55.0
SYD3_k127_8426267_14 PFAM PASTA domain K01921,K08884,K12132 - 2.7.11.1,6.3.2.4 0.000103 53.0
SYD3_k127_8426267_15 LysM domain - - - 0.0001828 53.0
SYD3_k127_8426267_2 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 590.0
SYD3_k127_8426267_3 Glycine oxidase K03153 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016491,GO:0016638,GO:0016641,GO:0017144,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0036094,GO:0042364,GO:0042723,GO:0042724,GO:0043167,GO:0043168,GO:0043436,GO:0043799,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0071949,GO:0072527,GO:0072528,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.4.3.19 0.00000000000000000000000000000000000000000000000000000000000000002822 251.0
SYD3_k127_8426267_4 PFAM Ribulose-phosphate 3-epimerase K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000002563 235.0
SYD3_k127_8426267_5 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000007142 194.0
SYD3_k127_8426267_6 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000001951 149.0
SYD3_k127_8426267_7 related to Ser Thr protein kinases K07102 GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006022,GO:0006040,GO:0006082,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.1.221 0.00000000000000000000000001073 123.0
SYD3_k127_8426267_8 Cytochrome c - - - 0.00000000000000000000004061 108.0
SYD3_k127_8426267_9 TIGRFAM Outer membrane assembly lipoprotein YfiO K05807 - - 0.00000000000000000000018 111.0
SYD3_k127_8494702_0 YmdB-like protein K09769 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004196 323.0
SYD3_k127_8494702_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001252 304.0
SYD3_k127_8494702_10 O-Antigen ligase K18814 - - 0.00000000000000000000000000176 125.0
SYD3_k127_8494702_11 Glycosyl transferases group 1 - - - 0.0000000000000000000181 104.0
SYD3_k127_8494702_12 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000004952 91.0
SYD3_k127_8494702_13 mRNA catabolic process K18682 - - 0.0000000000002244 70.0
SYD3_k127_8494702_14 Redoxin K03564 - 1.11.1.15 0.00000000003097 67.0
SYD3_k127_8494702_15 Redoxin K03564 - 1.11.1.15 0.00000000007249 67.0
SYD3_k127_8494702_16 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000005351 66.0
SYD3_k127_8494702_17 Belongs to the UPF0434 family K09791 - - 0.000004354 59.0
SYD3_k127_8494702_2 surface antigen variable number - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002063 295.0
SYD3_k127_8494702_3 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000001947 263.0
SYD3_k127_8494702_4 alcohol dehydrogenase K00008 - 1.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000001775 259.0
SYD3_k127_8494702_5 Polyprenyl synthetase K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000004144 252.0
SYD3_k127_8494702_6 Psort location Cytoplasmic, score K00008,K00060 - 1.1.1.103,1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000009506 242.0
SYD3_k127_8494702_7 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000003335 228.0
SYD3_k127_8494702_8 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000006052 206.0
SYD3_k127_8494702_9 DEAD/H associated K03724 - - 0.0000000000000000000000000000000006345 136.0
SYD3_k127_8532019_0 Peptidase S46 - - - 4.624e-211 679.0
SYD3_k127_8532019_1 response to oxidative stress K04063 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006970,GO:0006972,GO:0006979,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0033194,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1990748 - 0.000000000000000000000000000000000000000000000000000002915 200.0
SYD3_k127_8532019_2 BON domain K04065 - - 0.000000000000000000000000000000000001985 148.0
SYD3_k127_8532019_3 - - - - 0.000000000000000000000003809 106.0
SYD3_k127_8532019_4 Trypsin K04771 - 3.4.21.107 0.000000000002556 81.0
SYD3_k127_8532019_5 Serine aminopeptidase, S33 K07019 - - 0.000000000004767 77.0
SYD3_k127_8532688_0 response to heat K03694,K03695 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 1.05e-231 732.0
SYD3_k127_8532688_1 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 548.0
SYD3_k127_8532688_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003963 383.0
SYD3_k127_8532688_3 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 316.0
SYD3_k127_8532688_4 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004808 284.0
SYD3_k127_8532688_5 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004159 284.0
SYD3_k127_8532688_6 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000001505 238.0
SYD3_k127_8532688_7 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000005242 179.0
SYD3_k127_8532688_8 Belongs to the CDS family K00981 GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044464,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 0.000000000000000000000000000000005082 138.0
SYD3_k127_8532688_9 methyltransferase - - - 0.0000000000000000000000000002855 130.0
SYD3_k127_8604779_0 peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005266 464.0
SYD3_k127_8604779_1 PFAM Glucose Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 359.0
SYD3_k127_8604779_2 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 290.0
SYD3_k127_8604779_4 DinB family - - - 0.0000000000000000000000000000000000001449 158.0
SYD3_k127_8604779_5 - - - - 0.0000000000002517 74.0
SYD3_k127_8604975_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K00256 - 1.3.99.16 5.095e-264 845.0
SYD3_k127_8604975_1 Peptidase S46 - - - 5.104e-200 644.0
SYD3_k127_8604975_10 AAA domain - - - 0.000000000000000000000000000000000000003887 164.0
SYD3_k127_8604975_11 - - - - 0.000000000000000000000000007955 115.0
SYD3_k127_8604975_12 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000002667 67.0
SYD3_k127_8604975_13 Putative adhesin - - - 0.000007569 58.0
SYD3_k127_8604975_2 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 374.0
SYD3_k127_8604975_3 epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004781 351.0
SYD3_k127_8604975_4 PFAM Methionine sulfoxide reductase B K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000007836 240.0
SYD3_k127_8604975_5 Peptide methionine sulfoxide reductase K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000003984 249.0
SYD3_k127_8604975_6 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000001614 239.0
SYD3_k127_8604975_7 Sortilin, neurotensin receptor 3, - - - 0.00000000000000000000000000000000000000000000000000000000000000038 225.0
SYD3_k127_8604975_8 response to oxidative stress K04063 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006970,GO:0006972,GO:0006979,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0033194,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1990748 - 0.000000000000000000000000000000000000000000000000000003227 193.0
SYD3_k127_8604975_9 [2Fe-2S] binding domain - - - 0.0000000000000000000000000000000000000000000000000848 183.0
SYD3_k127_8611111_0 Transport of potassium into the cell K03549 - - 2.926e-234 742.0
SYD3_k127_8611111_1 Transport of potassium into the cell K03549 - - 1.892e-209 670.0
SYD3_k127_8611111_10 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases K05710 - - 0.0000000000000001262 93.0
SYD3_k127_8611111_2 PFAM Rieske 2Fe-2S domain protein K00479,K00499 - 1.14.15.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006121 406.0
SYD3_k127_8611111_3 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000001756 237.0
SYD3_k127_8611111_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000002061 226.0
SYD3_k127_8611111_5 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.00000000000000000000000000000000000000000000000000000000002651 221.0
SYD3_k127_8611111_6 Transcriptional regulatory protein, C terminal K02483,K07667 GO:0008150,GO:0040007 - 0.000000000000000000000000000000000000000000000000005893 190.0
SYD3_k127_8611111_7 Histidine kinase K07646 - 2.7.13.3 0.0000000000000000000000000000000000000000000004094 185.0
SYD3_k127_8611111_8 response to abiotic stimulus K06867 - - 0.000000000000000000000000000000000000000004362 163.0
SYD3_k127_8611111_9 alpha-ribazole phosphatase activity K01834 - 5.4.2.11 0.00000000000000001173 88.0
SYD3_k127_8679700_0 Belongs to the aldehyde dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007651 532.0
SYD3_k127_8679700_1 CoA binding domain K09181 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 505.0
SYD3_k127_8679700_2 amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006175 252.0
SYD3_k127_8695072_0 xanthine dehydrogenase activity - - - 1.12e-321 997.0
SYD3_k127_8695072_1 X-Pro dipeptidyl-peptidase (S15 family) - - - 5.443e-276 869.0
SYD3_k127_8695072_10 allantoinase K01466 GO:0003674,GO:0003824,GO:0004038,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0019439,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 3.5.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 513.0
SYD3_k127_8695072_11 Peptidase, M16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 488.0
SYD3_k127_8695072_12 Belongs to the allantoicase family K01477 - 3.5.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 423.0
SYD3_k127_8695072_13 Dihydroorotate dehydrogenase K17723 GO:0003674,GO:0003824,GO:0003954,GO:0006139,GO:0006206,GO:0006208,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016491,GO:0016651,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 1.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 398.0
SYD3_k127_8695072_14 Ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 361.0
SYD3_k127_8695072_15 CO dehydrogenase flavoprotein C-terminal domain K13479 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 327.0
SYD3_k127_8695072_16 Catalyzes the oxidation of uric acid to 5- hydroxyisourate, which is further processed to form (S)-allantoin K00365 - 1.7.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000005054 269.0
SYD3_k127_8695072_17 integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000008205 228.0
SYD3_k127_8695072_18 2 iron, 2 sulfur cluster binding K03518,K07302,K13483 - 1.2.5.3,1.3.99.16 0.0000000000000000000000000000000000000000003723 182.0
SYD3_k127_8695072_19 OHCU decarboxylase K16840 - 4.1.1.97 0.0000000000000000000000000000000000000007998 155.0
SYD3_k127_8695072_2 Sugar (and other) transporter K07058 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 5.212e-231 735.0
SYD3_k127_8695072_20 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 GO:0003674,GO:0003824,GO:0003841,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016020,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0042171,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071617,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.3.1.51 0.000000000000000000000000000000000000009132 154.0
SYD3_k127_8695072_21 Phospholipid methyltransferase - - - 0.000000000000000000000000000000000007869 141.0
SYD3_k127_8695072_22 Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily K07127 - 3.5.2.17 0.0000000000000000000000000000000001711 134.0
SYD3_k127_8695072_23 DNA-binding transcription factor activity K03892 GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000005829 124.0
SYD3_k127_8695072_24 CHRD domain - - - 0.0000000000000000000008676 108.0
SYD3_k127_8695072_25 guanyl-nucleotide exchange factor activity K20276 - - 0.0000000001514 64.0
SYD3_k127_8695072_3 Insulinase (Peptidase family M16) - - - 9.135e-204 643.0
SYD3_k127_8695072_4 PFAM amidohydrolase K01464 - 3.5.2.2 5.366e-196 636.0
SYD3_k127_8695072_5 PFAM Permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 599.0
SYD3_k127_8695072_6 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006315 587.0
SYD3_k127_8695072_7 Pyridoxal-dependent decarboxylase conserved domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 549.0
SYD3_k127_8695072_8 Belongs to the HpcH HpaI aldolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 550.0
SYD3_k127_8695072_9 Carbon-nitrogen hydrolase K01431,K12251 - 3.5.1.53,3.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003333 517.0
SYD3_k127_8721489_0 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 543.0
SYD3_k127_8721489_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 376.0
SYD3_k127_8721489_2 Peptidase M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007484 291.0
SYD3_k127_8721489_3 electron transfer flavoprotein, alpha subunit K03522,K22432 - 1.3.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002059 281.0
SYD3_k127_8721489_4 Electron transfer flavoprotein domain K03521 - - 0.000000000000000000000000000000000000000000000000000000000000001146 227.0
SYD3_k127_8790411_0 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02481,K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006814 466.0
SYD3_k127_8790411_1 Glutamate formiminotransferase K00603,K13990 - 2.1.2.5,4.3.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000694 362.0
SYD3_k127_8790411_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses K01916,K01950 - 6.3.1.5,6.3.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000004766 277.0
SYD3_k127_8797891_0 e3 binding domain K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 417.0
SYD3_k127_8797891_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 346.0
SYD3_k127_8797891_10 TIGRFAM TonB family protein K03832 - - 0.000000003711 68.0
SYD3_k127_8797891_11 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00007309 55.0
SYD3_k127_8797891_2 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000217 282.0
SYD3_k127_8797891_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006559 284.0
SYD3_k127_8797891_4 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000005437 248.0
SYD3_k127_8797891_5 ACT domain K12524 - 1.1.1.3,2.7.2.4 0.000000000000000000000000000000000000000000000000000004983 198.0
SYD3_k127_8797891_6 Biotin/lipoate A/B protein ligase family K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000004057 210.0
SYD3_k127_8797891_7 membrane - - - 0.00000000000000000000000000000000000000000034 173.0
SYD3_k127_8797891_8 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000001596 76.0
SYD3_k127_8797891_9 membrane - - - 0.0000000003752 66.0
SYD3_k127_880801_0 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 548.0
SYD3_k127_880801_1 Peptidase M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 389.0
SYD3_k127_880801_2 electron transfer flavoprotein, alpha subunit K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000609 282.0
SYD3_k127_880801_3 electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000001076 138.0
SYD3_k127_880801_4 Belongs to the UPF0102 family K07460 - - 0.000000000000002122 82.0
SYD3_k127_880801_5 domain, Protein - - - 0.000000009637 67.0
SYD3_k127_8808121_0 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005344 490.0
SYD3_k127_8808121_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001199 257.0
SYD3_k127_8808121_2 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.000000000000000000000005603 103.0
SYD3_k127_8808121_3 - - - - 0.00000294 51.0
SYD3_k127_886163_0 PD-(D/E)XK nuclease superfamily K16899 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 481.0
SYD3_k127_886163_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001411 274.0
SYD3_k127_886163_2 PD-(D/E)XK nuclease superfamily K16898 - 3.6.4.12 0.000001678 60.0
SYD3_k127_8899977_0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005282 540.0
SYD3_k127_8899977_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015 - 1.1.1.26 0.0000000000000000000000000000000000000000598 156.0
SYD3_k127_8899977_2 ECF sigma factor K03088 - - 0.00000000000000000000000003674 113.0
SYD3_k127_8899977_3 DUF167 K09131 - - 0.00000000001362 74.0
SYD3_k127_8899977_4 Psort location Cytoplasmic, score - - - 0.0005687 47.0
SYD3_k127_8912190_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 471.0
SYD3_k127_8912190_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000145 283.0
SYD3_k127_8912190_2 Peptidase C26 K01658,K01664 - 2.6.1.85,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000154 230.0
SYD3_k127_8912190_3 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000009735 211.0
SYD3_k127_8912190_4 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000001101 164.0
SYD3_k127_8912190_5 Belongs to the TrpC family K01609 - 4.1.1.48 0.0000000000000000000000000000000000000002111 162.0
SYD3_k127_8912190_6 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000009017 136.0
SYD3_k127_8927915_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 436.0
SYD3_k127_8927915_1 Phosphoesterase family K21302 - 3.1.3.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 339.0
SYD3_k127_8927915_2 Belongs to the phosphoenolpyruvate carboxykinase (ATP) family K01610 - 4.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 284.0
SYD3_k127_8927915_3 ABC transporter K09817 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 285.0
SYD3_k127_8927915_4 Protein of unknown function (DUF1353) - - - 0.000000000000000000000000000000000007546 141.0
SYD3_k127_8927915_5 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000000000000001365 144.0
SYD3_k127_8927915_6 Involved in transport of zinc(II) with ZnuA and C K09816 GO:0000006,GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0010035,GO:0010038,GO:0010043,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0042221,GO:0044464,GO:0046873,GO:0046915,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.0000000000000000000004966 105.0
SYD3_k127_8927915_7 - - - - 0.000000000001305 70.0
SYD3_k127_9008239_0 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 468.0
SYD3_k127_9008239_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710,K12450 GO:0000166,GO:0000271,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005975,GO:0005976,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008460,GO:0009058,GO:0009059,GO:0009225,GO:0009226,GO:0009987,GO:0016051,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019305,GO:0019438,GO:0030312,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044464,GO:0045226,GO:0046379,GO:0046383,GO:0046483,GO:0048037,GO:0050662,GO:0051287,GO:0055086,GO:0070404,GO:0071704,GO:0071944,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 4.2.1.46,4.2.1.76 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004787 408.0
SYD3_k127_9008239_2 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000006532 237.0
SYD3_k127_9008239_3 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744,K09774,K22110 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0006810,GO:0008150,GO:0008643,GO:0008645,GO:0009279,GO:0015267,GO:0015288,GO:0015749,GO:0015750,GO:0015751,GO:0015757,GO:0016020,GO:0019867,GO:0022803,GO:0022829,GO:0022857,GO:0030312,GO:0030313,GO:0031975,GO:0034219,GO:0044462,GO:0044464,GO:0046323,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:1904659 - 0.0000000000000000000000000000000000000000000000000000000000001501 238.0
SYD3_k127_9008239_4 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000002796 166.0
SYD3_k127_9008239_5 PFAM Methyltransferase type - - - 0.00000000000000000000000000000008171 139.0
SYD3_k127_9008239_6 membrane - GO:0005575,GO:0016020 - 0.00000000000008198 84.0
SYD3_k127_9008239_7 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17105 - 2.5.1.42 0.00000009815 62.0
SYD3_k127_9207896_0 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 420.0
SYD3_k127_9207896_1 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000007439 123.0
SYD3_k127_92116_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1444.0
SYD3_k127_92116_1 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 556.0
SYD3_k127_92116_10 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003684 354.0
SYD3_k127_92116_11 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005569 302.0
SYD3_k127_92116_12 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001382 281.0
SYD3_k127_92116_13 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007926 260.0
SYD3_k127_92116_14 Glycosyl transferase, family 2 K00721,K20534 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000003832 267.0
SYD3_k127_92116_15 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000001565 248.0
SYD3_k127_92116_16 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000002863 239.0
SYD3_k127_92116_17 Hexapeptide repeat of succinyl-transferase - - - 0.00000000000000000000000000000000000000000000000000000000007496 216.0
SYD3_k127_92116_18 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000003832 212.0
SYD3_k127_92116_19 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000003087 209.0
SYD3_k127_92116_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K03918 - 2.6.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003277 499.0
SYD3_k127_92116_20 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000001071 192.0
SYD3_k127_92116_21 GAF domain - - - 0.00000000000000000000000000000000000000000000000002241 194.0
SYD3_k127_92116_22 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000005196 179.0
SYD3_k127_92116_23 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.00000000000000000000000000000000000000002083 173.0
SYD3_k127_92116_24 low molecular weight K03741 - 1.20.4.1 0.000000000000000000000000000003731 124.0
SYD3_k127_92116_25 Glycosyl transferases group 1 - - - 0.00000008319 66.0
SYD3_k127_92116_3 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004816 449.0
SYD3_k127_92116_4 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 405.0
SYD3_k127_92116_5 Transposase K02557,K07484,K13924,K21471 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007173 419.0
SYD3_k127_92116_6 NAD-dependent epimerase dehydratase K01784,K12454 - 5.1.3.10,5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 377.0
SYD3_k127_92116_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 395.0
SYD3_k127_92116_8 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 371.0
SYD3_k127_92116_9 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006109 359.0
SYD3_k127_9213453_0 ABC transporter transmembrane region K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004768 488.0
SYD3_k127_9213453_1 peptidoglycan-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005506 397.0
SYD3_k127_9213453_2 Belongs to the BI1 family K06890,K19416 - - 0.0000000000000000000000000000000000000000000000000000000000000003616 228.0
SYD3_k127_9213453_3 heme binding K21472 - - 0.00000000000000000000000000000000000000000000000000003734 199.0
SYD3_k127_9213453_4 photosynthesis - - - 0.0000000000000000000000000000000000000000000005597 170.0
SYD3_k127_9226678_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1114.0
SYD3_k127_9226678_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 373.0
SYD3_k127_92440_0 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 504.0
SYD3_k127_92440_1 PFAM Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000693 439.0
SYD3_k127_92440_10 - - - - 0.0000000000000000000000000000000000000001998 158.0
SYD3_k127_92440_11 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000009769 133.0
SYD3_k127_92440_12 PIN domain - - - 0.00000000009339 69.0
SYD3_k127_92440_13 Sporulation and spore germination - - - 0.0000000001232 75.0
SYD3_k127_92440_14 SnoaL-like domain - - - 0.00000005348 61.0
SYD3_k127_92440_15 SpoVT / AbrB like domain - - - 0.000001907 53.0
SYD3_k127_92440_16 protein involved in tolerance to divalent cations K03926 GO:0003674,GO:0005488,GO:0005507,GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0016043,GO:0022607,GO:0042221,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0046688,GO:0046872,GO:0046914,GO:0050896,GO:0051259,GO:0051260,GO:0065003,GO:0071840 - 0.0002677 44.0
SYD3_k127_92440_2 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009445 397.0
SYD3_k127_92440_3 SMART Tetratricopeptide - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 401.0
SYD3_k127_92440_4 Thermophilic metalloprotease (M29) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007605 387.0
SYD3_k127_92440_5 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003511 363.0
SYD3_k127_92440_6 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004984 289.0
SYD3_k127_92440_7 esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000006059 232.0
SYD3_k127_92440_8 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000005905 194.0
SYD3_k127_92440_9 Berberine and berberine like - - - 0.00000000000000000000000000000000000000000006538 160.0
SYD3_k127_9265663_0 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 3.529e-203 651.0
SYD3_k127_9265663_1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002907 471.0
SYD3_k127_9265663_2 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003325 368.0
SYD3_k127_9265663_3 quinone binding K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006789 366.0
SYD3_k127_9265663_4 formate dehydrogenase (NAD+) activity K00336,K18006 - 1.12.1.2,1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 332.0
SYD3_k127_9265663_5 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000009126 165.0
SYD3_k127_9265663_6 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.000000000000000000000000000000000000002369 162.0
SYD3_k127_9265663_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000000000000761 111.0
SYD3_k127_9265663_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000004561 109.0
SYD3_k127_9265663_9 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000001496 96.0
SYD3_k127_9349136_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 509.0
SYD3_k127_9349136_1 mRNA catabolic process K18682 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 487.0
SYD3_k127_9349136_2 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 390.0
SYD3_k127_9349136_3 Protein kinase domain - - - 0.0000000000000005189 87.0
SYD3_k127_9349136_4 Cell division protein ZapA K09888 - - 0.00000000002863 68.0
SYD3_k127_9349136_5 Forkhead associated domain - GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006110,GO:0006140,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010563,GO:0010675,GO:0010677,GO:0016020,GO:0016310,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0030312,GO:0030808,GO:0030809,GO:0030811,GO:0030812,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031330,GO:0036211,GO:0042325,GO:0042326,GO:0042802,GO:0043170,GO:0043412,GO:0043457,GO:0043467,GO:0043470,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045820,GO:0045912,GO:0045934,GO:0045936,GO:0045980,GO:0046777,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051174,GO:0051193,GO:0051195,GO:0051196,GO:0051198,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:1900371,GO:1900372,GO:1900542,GO:1900543,GO:1901564,GO:1903578,GO:1903579,GO:2001169,GO:2001170 - 0.00000005281 63.0
SYD3_k127_9369104_0 Cobalamin-independent synthase, Catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003103 485.0
SYD3_k127_9369104_1 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 492.0
SYD3_k127_9369104_2 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 316.0
SYD3_k127_9369104_3 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000001171 190.0
SYD3_k127_9369104_4 ferredoxin - - - 0.00000000000000000000000000006783 117.0
SYD3_k127_9369104_5 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000005352 53.0
SYD3_k127_946734_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 1.323e-258 831.0
SYD3_k127_946734_1 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 526.0
SYD3_k127_946734_10 PFAM Glycosyl transferase family 2 K07011 - - 0.000000000000000000000000000000000001697 152.0
SYD3_k127_946734_11 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000004266 143.0
SYD3_k127_946734_12 PFAM Pentapeptide repeats (8 copies) - - - 0.000000000000000000000000007249 128.0
SYD3_k127_946734_13 Domain of unknown function (DUF4340) - - - 0.000000000000000005288 97.0
SYD3_k127_946734_14 polysaccharide deacetylase - - - 0.0000000000000003135 93.0
SYD3_k127_946734_15 - - - - 0.000000000000001728 90.0
SYD3_k127_946734_16 polysaccharide deacetylase - - - 0.00000000000004654 85.0
SYD3_k127_946734_17 domain protein - - - 0.0000000000002374 83.0
SYD3_k127_946734_18 polysaccharide deacetylase - - - 0.0000000000003595 82.0
SYD3_k127_946734_19 protein-disulfide reductase activity K01829,K04084 - 1.8.1.8,5.3.4.1 0.0000000000127 74.0
SYD3_k127_946734_2 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 418.0
SYD3_k127_946734_20 COG3209 Rhs family protein - - - 0.00000000006798 75.0
SYD3_k127_946734_21 O-Antigen ligase - - - 0.00002808 57.0
SYD3_k127_946734_22 anaphase-promoting complex binding - - - 0.00004128 57.0
SYD3_k127_946734_3 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008199 290.0
SYD3_k127_946734_4 Pfam Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006175 262.0
SYD3_k127_946734_5 ABC-type uncharacterized transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000004065 254.0
SYD3_k127_946734_6 PFAM sugar transferase K13012 - - 0.0000000000000000000000000000000000000000000000000000000003598 224.0
SYD3_k127_946734_7 Glycosyl transferase family 21 - - - 0.000000000000000000000000000000000000000000000000001789 202.0
SYD3_k127_946734_8 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000006707 192.0
SYD3_k127_946734_9 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000003154 174.0
SYD3_k127_9472261_0 COGs COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K04108 - 1.3.7.9 1.063e-297 934.0
SYD3_k127_9472261_1 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008433 604.0
SYD3_k127_9472261_2 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 424.0
SYD3_k127_9472261_3 PFAM Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004438 304.0
SYD3_k127_9472261_4 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006243 300.0
SYD3_k127_9472261_5 Cna B domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003692 265.0
SYD3_k127_9472261_6 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001763 239.0
SYD3_k127_9472261_7 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000001243 216.0
SYD3_k127_9472261_8 chlorophyll binding - - - 0.0000001967 64.0
SYD3_k127_9475601_0 Bacterial protein of unknown function (DUF885) - - - 1.031e-236 745.0
SYD3_k127_9475601_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 2.778e-221 697.0
SYD3_k127_9475601_10 PDZ DHR GLGF domain protein - - - 0.00005593 56.0
SYD3_k127_9475601_2 cytochrome c nitrite reductase K15876 - - 0.00000000000000000000000000000000000000000000000000000000002004 209.0
SYD3_k127_9475601_3 peptidase - - - 0.0000000000000000000000000000000000000000000000000000001339 213.0
SYD3_k127_9475601_4 regulation of translation K03530 - - 0.0000000000000000000000000000000008743 133.0
SYD3_k127_9475601_5 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000001015 120.0
SYD3_k127_9475601_6 PFAM Acetyltransferase (GNAT) family - - - 0.00000000000000000000000005336 115.0
SYD3_k127_9475601_7 Thioesterase superfamily - - - 0.0000000000000000000002377 111.0
SYD3_k127_9475601_8 nuclease activity - - - 0.00000000006575 68.0
SYD3_k127_9475601_9 UPF0391 membrane protein - - - 0.0000001111 55.0
SYD3_k127_9503493_0 aminopeptidase activity - - - 0.0000000000000000000000000000004435 127.0
SYD3_k127_9503493_1 membrane-bound metal-dependent K07038 - - 0.00000000000000000000006537 111.0
SYD3_k127_9503493_2 PilZ domain - - - 0.00000000000000005709 91.0
SYD3_k127_9510017_0 PFAM Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.987e-219 694.0
SYD3_k127_9510017_1 ACT domain K12524 - 1.1.1.3,2.7.2.4 7.556e-196 625.0
SYD3_k127_9510017_2 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 524.0
SYD3_k127_9510017_4 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000003543 217.0
SYD3_k127_9510017_5 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000006801 189.0
SYD3_k127_9510017_6 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000009272 156.0
SYD3_k127_9510017_7 Glycosyl transferase family group 2 - - - 0.000000000000001604 87.0
SYD3_k127_9510017_8 SMART Transport-associated and nodulation - - - 0.000000005758 66.0
SYD3_k127_9519818_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005667 344.0
SYD3_k127_9519818_1 A G-specific K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000051 258.0
SYD3_k127_9519818_2 benzoyl-CoA oxygenase K15512 - 1.14.13.208 0.0000000000000000000000000000000000000000000000000000000004467 220.0
SYD3_k127_9519818_3 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000001254 154.0
SYD3_k127_9519818_4 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000003286 122.0
SYD3_k127_9519818_5 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.00000000007909 69.0
SYD3_k127_9519818_6 Uncharacterised protein family (UPF0158) - - - 0.000002003 55.0
SYD3_k127_9555062_0 3-demethylubiquinone-9 3-O-methyltransferase activity K07011,K20444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 398.0
SYD3_k127_9555062_1 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004518 271.0
SYD3_k127_9555062_10 - - - - 0.00003797 57.0
SYD3_k127_9555062_11 Membrane - - - 0.0005089 52.0
SYD3_k127_9555062_2 PFAM glycosyl transferase family 39 K14340 - - 0.000000000000000000000000000000000000000000000000000000944 214.0
SYD3_k127_9555062_4 - - - - 0.0000000000000000000000000002871 133.0
SYD3_k127_9555062_5 Acid phosphatase homologues K19302 - 3.6.1.27 0.0000000000000000000000001002 121.0
SYD3_k127_9555062_6 ATPases associated with a variety of cellular activities K01990,K09689,K09691,K09693 - 3.6.3.38,3.6.3.40 0.0000000000000000001704 95.0
SYD3_k127_9555062_7 membrane protein, required for N-linked glycosylation K07151 GO:0003674,GO:0003824,GO:0008150,GO:0009987,GO:0016043,GO:0016740,GO:0016757,GO:0045229,GO:0045232,GO:0071840 2.4.99.18 0.000000000000000004161 99.0
SYD3_k127_9555062_8 Bacterial membrane protein, YfhO - - - 0.000000000005398 79.0
SYD3_k127_9555062_9 Bacterial membrane protein, YfhO - - - 0.0000002708 61.0
SYD3_k127_9578954_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004656 465.0
SYD3_k127_9578954_1 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000002074 250.0
SYD3_k127_9578954_2 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000212 222.0
SYD3_k127_9578954_3 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000003184 197.0
SYD3_k127_9578954_4 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000001193 88.0
SYD3_k127_9578954_5 F5 8 type C domain protein - - - 0.00000308 57.0
SYD3_k127_9593491_0 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 484.0
SYD3_k127_9593491_1 Catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 355.0
SYD3_k127_9593491_2 Protein involved in meta-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000001459 178.0
SYD3_k127_9593491_3 Copper binding periplasmic protein CusF K07152 - - 0.0000000000000000000000000000000000000000001083 171.0
SYD3_k127_9593491_4 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000001753 126.0
SYD3_k127_9593491_5 Cytochrome c - - - 0.0000006809 61.0
SYD3_k127_9593491_6 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.0006373 44.0
SYD3_k127_9625702_0 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 302.0
SYD3_k127_9625702_1 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008559 282.0
SYD3_k127_9625702_2 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) - - - 0.0000000000000000000000000000000000831 142.0
SYD3_k127_9625702_3 PFAM PTS system fructose subfamily IIA component K02793 - 2.7.1.191 0.000000000000000000000000002514 117.0
SYD3_k127_9625702_4 phosphocarrier protein HPr K11189 - - 0.000000000000000000000003804 111.0
SYD3_k127_9691382_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00322 - 1.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008944 612.0
SYD3_k127_9691382_1 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004769 327.0
SYD3_k127_9691382_2 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 293.0
SYD3_k127_9691382_3 transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000002992 181.0
SYD3_k127_9691382_4 Domain of unknown function (DUF4136) - - - 0.00000000000000000000000005222 122.0
SYD3_k127_9691382_5 nucleic acid phosphodiester bond hydrolysis K07576,K07577 - - 0.0000000000000000000000001719 108.0
SYD3_k127_9691382_6 UPF0761 membrane protein K07058 - - 0.0000000000000000002036 101.0
SYD3_k127_9692265_0 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 349.0
SYD3_k127_9692265_1 - K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002259 293.0
SYD3_k127_9692265_2 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003321 263.0
SYD3_k127_9692265_3 Carboxypeptidase regulatory-like domain - - - 0.0000002411 65.0
SYD3_k127_9732607_0 peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 538.0
SYD3_k127_9732607_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 451.0
SYD3_k127_9732607_10 Transcription factor zinc-finger K09981 - - 0.0000000000007358 74.0
SYD3_k127_9732607_11 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000005811 60.0
SYD3_k127_9732607_2 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 394.0
SYD3_k127_9732607_3 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 379.0
SYD3_k127_9732607_4 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 364.0
SYD3_k127_9732607_5 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007624 335.0
SYD3_k127_9732607_6 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 289.0
SYD3_k127_9732607_7 4-hydroxy-tetrahydrodipicolinate reductase K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.000000000000000000000000000000000000000000000748 175.0
SYD3_k127_9732607_8 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000001719 168.0
SYD3_k127_9732607_9 - - - - 0.00000000000004047 73.0
SYD3_k127_973353_0 Protein of unknown function, DUF255 K06888 - - 5.194e-203 652.0
SYD3_k127_973353_1 penicillin amidase K01434 - 3.5.1.11 4.613e-199 648.0
SYD3_k127_973353_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00172,K00441,K03522 - 1.12.98.1,1.2.7.1 0.0000000000000000000000007601 109.0
SYD3_k127_973353_11 - - - - 0.00000000000000000002488 97.0
SYD3_k127_973353_12 UbiA prenyltransferase family K03179,K17105 - 2.5.1.39,2.5.1.42 0.00000000000004578 83.0
SYD3_k127_973353_13 PBS lyase HEAT-like repeat - - - 0.00000003835 65.0
SYD3_k127_973353_2 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 484.0
SYD3_k127_973353_3 PFAM Cytochrome b b6 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000296 408.0
SYD3_k127_973353_4 Cytochrome b(C-terminal)/b6/petD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 387.0
SYD3_k127_973353_5 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 384.0
SYD3_k127_973353_6 histone deacetylase K11407 - 3.5.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003965 328.0
SYD3_k127_973353_7 PFAM Rieske 2Fe-2S domain K02636,K03886 - 1.10.9.1 0.000000000000000000000000000000000000000000000000000001646 197.0
SYD3_k127_973353_8 LssY C-terminus - - - 0.0000000000000000000000000000000000000000000000000001462 199.0
SYD3_k127_973353_9 Transcriptional regulator K02529 - - 0.0000000000000000000000000000000000000000003382 162.0
SYD3_k127_9753531_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 3.271e-224 723.0
SYD3_k127_9753531_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 7.565e-205 645.0
SYD3_k127_9753531_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009761 263.0
SYD3_k127_9753531_3 Putative esterase - - - 0.000000000000000000000000000000000000002347 158.0
SYD3_k127_9753531_4 radical SAM domain protein - - - 0.0000004287 56.0
SYD3_k127_9778322_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 385.0
SYD3_k127_9778322_1 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 320.0
SYD3_k127_9778322_10 Virulence activator alpha C-term - - - 0.00000000000000001167 90.0
SYD3_k127_9778322_11 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000006333 83.0
SYD3_k127_9778322_12 Putative zinc-finger - - - 0.00000006093 64.0
SYD3_k127_9778322_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000978 328.0
SYD3_k127_9778322_3 ADP-ribosylation factor family K06883 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000102 265.0
SYD3_k127_9778322_4 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000001456 243.0
SYD3_k127_9778322_5 Roadblock/LC7 domain - - - 0.0000000000000000000000000000000000000000000000002555 183.0
SYD3_k127_9778322_6 methylamine metabolic process - - - 0.000000000000000000000000000000000005485 143.0
SYD3_k127_9778322_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000011 129.0
SYD3_k127_9778322_8 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K01760 - 4.4.1.8 0.0000000000000000000000000008647 121.0
SYD3_k127_9778322_9 PFAM HD domain - - - 0.0000000000000000001077 96.0
SYD3_k127_9821080_0 OmpA family K02557,K03286 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007324 494.0
SYD3_k127_9821080_1 Amino acid permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006166 478.0
SYD3_k127_9821080_10 TIGRFAM Small GTP-binding protein K06883 - - 0.000000000000000000000000000000000000000000000000000000000000008633 222.0
SYD3_k127_9821080_11 ATPases associated with a variety of cellular activities K05847 - - 0.0000000000000000000000000000000000000000000000005226 178.0
SYD3_k127_9821080_12 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000001318 163.0
SYD3_k127_9821080_13 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000004445 106.0
SYD3_k127_9821080_14 endo-1,4-beta-xylanase activity - - - 0.000000000000000000009424 105.0
SYD3_k127_9821080_15 Lysin motif - - - 0.0000000000000002727 82.0
SYD3_k127_9821080_16 Ferritin-like domain - - - 0.000000000000003387 86.0
SYD3_k127_9821080_17 PPIC-type PPIASE domain - - - 0.000000006656 65.0
SYD3_k127_9821080_2 serine-type peptidase activity K01278 - 3.4.14.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006048 490.0
SYD3_k127_9821080_3 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004435 462.0
SYD3_k127_9821080_4 Fructose-1-6-bisphosphatase, N-terminal domain K03841 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 338.0
SYD3_k127_9821080_5 PFAM Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008519 301.0
SYD3_k127_9821080_6 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001053 286.0
SYD3_k127_9821080_7 calcium proton exchanger K07300 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001119 274.0
SYD3_k127_9821080_8 Peptidase M15 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002519 261.0
SYD3_k127_9821080_9 PFAM Binding-protein-dependent transport system inner membrane component K05846 - - 0.00000000000000000000000000000000000000000000000000000000000000000007659 243.0
SYD3_k127_9856244_0 ABC transporter K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005382 374.0
SYD3_k127_9856244_1 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006166 313.0
SYD3_k127_9856244_2 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005308 310.0
SYD3_k127_9856244_3 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.0000000000000000000000000000000000000000000000000000000005567 206.0
SYD3_k127_9856244_4 NMT1-like family K02051 - - 0.00000000000000000003039 93.0
SYD3_k127_9856244_5 Domain of unknown function (DUF4437) - - - 0.0000000000000008973 83.0
SYD3_k127_9912501_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 289.0
SYD3_k127_9912501_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000002211 226.0
SYD3_k127_9912501_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000001873 209.0
SYD3_k127_9912501_3 DSBA-like thioredoxin domain - - - 0.00000000000000000001004 105.0
SYD3_k127_9912501_4 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000001113 85.0
SYD3_k127_9930904_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009946 450.0
SYD3_k127_9930904_1 Belongs to the PdxS SNZ family K06215 - 4.3.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008912 404.0
SYD3_k127_9930904_2 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.000000000000000000000000000000000000000000000000000000000002766 218.0
SYD3_k127_9930904_3 Alanine-glyoxylate amino-transferase - - - 0.00000000000000000000000000000000000000000000000000000000002638 224.0
SYD3_k127_9930904_4 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.0000000000000000000000000000000000000000000000000001706 196.0
SYD3_k127_9930904_5 PFAM Enoyl-CoA hydratase isomerase K01692 - 4.2.1.17 0.0000000000000000000000000000000000002807 157.0
SYD3_k127_9930904_6 cellulase activity - - - 0.0000000000000000000000000006662 128.0
SYD3_k127_9930904_8 arylamine N-acetyltransferase activity - - - 0.0000000002607 74.0
SYD3_k127_9966253_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 498.0
SYD3_k127_9966253_1 NADPH:quinone reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 424.0
SYD3_k127_9966253_10 SnoaL-like polyketide cyclase - - - 0.000000000000000001357 88.0
SYD3_k127_9966253_11 - - - - 0.00000000000000005543 91.0
SYD3_k127_9966253_12 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.0000000008937 66.0
SYD3_k127_9966253_2 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 343.0
SYD3_k127_9966253_3 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 328.0
SYD3_k127_9966253_4 Metallophosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002213 284.0
SYD3_k127_9966253_5 Domain of unknown function (DUF4386) - - - 0.0000000000000000000000000000000000000000000000000000000000001005 220.0
SYD3_k127_9966253_6 Domain of unknown function (DUF4386) - - - 0.00000000000000000000000000005683 125.0
SYD3_k127_9966253_7 ECF sigma factor K03088 - - 0.0000000000000000000000000000711 129.0
SYD3_k127_9966253_8 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000001046 106.0
SYD3_k127_9966253_9 PFAM cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.000000000000000000629 100.0
SYD3_k127_9978225_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006531 439.0
SYD3_k127_9978225_1 Vitamin K epoxide reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001085 280.0
SYD3_k127_9978225_2 Belongs to the sirtuin family. Class K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003233 247.0
SYD3_k127_9978225_3 cheY-homologous receiver domain - - - 0.0000000000000000000000000007444 119.0
SYD3_k127_9978225_4 phosphorelay signal transduction system - - - 0.0000000000000000000000722 106.0
SYD3_k127_9978225_5 cheY-homologous receiver domain - - - 0.00000000000000007723 85.0
SYD3_k127_9996442_0 Selenocysteine-specific translation elongation factor K03833 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 436.0
SYD3_k127_9996442_1 Pfam Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007429 381.0
SYD3_k127_9996442_2 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001288 287.0
SYD3_k127_9996442_3 Deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000004242 236.0
SYD3_k127_9996442_4 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000003985 153.0
SYD3_k127_9996442_5 PFAM Nucleotidyl transferase K00966 - 2.7.7.13 0.0000000000000000000000000000000005831 143.0
SYD3_k127_9996442_6 YqeY-like protein K09117 - - 0.000000000000000000000000000000009154 132.0
SYD3_k127_9996442_7 Protein tyrosine kinase - - - 0.0000000000000000000000000000009292 126.0
SYD3_k127_9996442_8 PFAM Adenylate cyclase K05873 - 4.6.1.1 0.00000000000000000000000007589 117.0
SYD3_k127_9996442_9 photosystem II stabilization K00703,K02237,K02238 - 2.4.1.21 0.000000000000006998 81.0