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Overview

ID MAG03791
Name SYD3_bin.21
Sample SMP0096
Taxonomy
Kingdom Bacteria
Phylum Bacteroidota
Class Bacteroidia
Order Chitinophagales
Family Saprospiraceae
Genus DATDQA01
Species
Assembly information
Completeness (%) 98.1
Contamination (%) 2.12
GC content (%) 48.0
N50 (bp) 22,200
Genome size (bp) 4,475,154

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3439

Gene name Description KEGG GOs EC E-value Score Sequence
SYD3_k127_1013843_0 OmpA MotB domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007656 544.0
SYD3_k127_1013843_1 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 505.0
SYD3_k127_1013843_11 OmpA MotB domain protein - - - 0.000000000000000000006928 96.0
SYD3_k127_1013843_2 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 395.0
SYD3_k127_1013843_3 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004419 383.0
SYD3_k127_1013843_4 TonB-linked outer membrane protein, SusC RagA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006215 346.0
SYD3_k127_1013843_5 Predicted periplasmic lipoprotein (DUF2279) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 327.0
SYD3_k127_1013843_6 long-chain fatty acid transporting porin activity K06076 - - 0.0000000000000000000000000000000000000000000000000000837 203.0
SYD3_k127_1013843_7 Transposase IS200 like - - - 0.0000000000000000000000000000000000003777 146.0
SYD3_k127_1013843_8 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000006711 137.0
SYD3_k127_1013843_9 DinB superfamily - - - 0.000000000000000000000000002299 118.0
SYD3_k127_1015583_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1044.0
SYD3_k127_1015583_1 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02622 - - 1.957e-293 914.0
SYD3_k127_1015583_10 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002137 236.0
SYD3_k127_1015583_11 beta-1,4-mannooligosaccharide phosphorylase K21065 - 3.2.1.197 0.000000000000000000000000000000000000000000000000000000004667 203.0
SYD3_k127_1015583_13 transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000003384 102.0
SYD3_k127_1015583_14 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000001042 80.0
SYD3_k127_1015583_15 CvpA family K03558 - - 0.000005201 55.0
SYD3_k127_1015583_16 Tetratricopeptide TPR_2 repeat protein - - - 0.00001832 58.0
SYD3_k127_1015583_2 Glucose / Sorbosone dehydrogenase - - - 7.936e-209 679.0
SYD3_k127_1015583_3 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 5.034e-206 657.0
SYD3_k127_1015583_4 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 573.0
SYD3_k127_1015583_5 histidine kinase-, DNA gyrase B - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008346 559.0
SYD3_k127_1015583_6 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009014 458.0
SYD3_k127_1015583_7 Haloacid dehalogenase-like hydrolase K07025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000497 345.0
SYD3_k127_1015583_8 Glycosyl hydrolases family 16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000103 277.0
SYD3_k127_1015583_9 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000007913 258.0
SYD3_k127_10170868_0 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 5.989e-296 922.0
SYD3_k127_10170868_1 PFAM GH3 auxin-responsive promoter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 591.0
SYD3_k127_10170868_10 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000004245 196.0
SYD3_k127_10170868_11 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000000000000000000556 213.0
SYD3_k127_10170868_12 Transposase IS200 like - - - 0.000000000000000000000000000000000000000008273 158.0
SYD3_k127_10170868_13 Chaperone of endosialidase - - - 0.0000000000000000000000000000000000000000639 176.0
SYD3_k127_10170868_14 - - - - 0.000000000000000000000000000000000002052 143.0
SYD3_k127_10170868_15 Transposase, Mutator family - - - 0.0000000000000000000002871 102.0
SYD3_k127_10170868_16 Pkd domain containing protein - - - 0.000000000000000002839 102.0
SYD3_k127_10170868_17 tail collar domain protein - - - 0.00000000005408 77.0
SYD3_k127_10170868_18 ASPIC and UnbV - - - 0.000001373 57.0
SYD3_k127_10170868_2 GH3 auxin-responsive promoter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 518.0
SYD3_k127_10170868_20 Belongs to the peptidase S8 family - - - 0.00004768 52.0
SYD3_k127_10170868_21 - - - - 0.0001615 53.0
SYD3_k127_10170868_22 - - - - 0.0001857 51.0
SYD3_k127_10170868_23 COG3328 Transposase and inactivated derivatives - - - 0.0009165 42.0
SYD3_k127_10170868_3 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 396.0
SYD3_k127_10170868_4 PFAM ROK family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004355 381.0
SYD3_k127_10170868_5 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 319.0
SYD3_k127_10170868_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001275 271.0
SYD3_k127_10170868_7 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000002765 213.0
SYD3_k127_10170868_8 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000004762 236.0
SYD3_k127_10170868_9 - - - - 0.0000000000000000000000000000000000000000000000000000002247 203.0
SYD3_k127_10173168_0 Peptidase family M28 - - - 3.507e-227 715.0
SYD3_k127_10173168_1 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006833 497.0
SYD3_k127_10173168_10 TonB-dependent receptor plug K02014 - - 0.000005323 51.0
SYD3_k127_10173168_2 Serine aminopeptidase, S33 K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005529 355.0
SYD3_k127_10173168_3 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000005433 242.0
SYD3_k127_10173168_4 Protein of unknown function (DUF3078) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001443 243.0
SYD3_k127_10173168_5 oxidoreductase activity - - - 0.00000000000000000000000000000000000000000000000000001385 214.0
SYD3_k127_10173168_6 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.0000000000000000000000000000000000000000000000000006612 187.0
SYD3_k127_10173168_7 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000004561 185.0
SYD3_k127_10173168_8 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.00000000000000000000000000000000008295 137.0
SYD3_k127_10173168_9 ThiS family K03636 - - 0.0000000001528 64.0
SYD3_k127_10274742_0 domain, Protein K20276 - - 0.000000000000000000000000000000000000000001172 180.0
SYD3_k127_10274742_1 IMG reference gene - - - 0.00000000000000000000000001004 111.0
SYD3_k127_10274742_2 HYR domain - - - 0.0000000003786 74.0
SYD3_k127_10274742_3 Fungalysin metallopeptidase (M36) - - - 0.000000001986 71.0
SYD3_k127_10286793_0 PKD domain containing protein - - - 3.771e-242 775.0
SYD3_k127_10286793_1 Bacterial membrane protein YfhO - - - 7.63e-219 706.0
SYD3_k127_10286793_10 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 467.0
SYD3_k127_10286793_11 Fic DOC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005742 460.0
SYD3_k127_10286793_12 UDP-N-acetylglucosamine 2-epimerase activity K01791 - 5.1.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007632 456.0
SYD3_k127_10286793_13 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003512 454.0
SYD3_k127_10286793_14 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 448.0
SYD3_k127_10286793_15 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791,K13019 - 5.1.3.14,5.1.3.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 414.0
SYD3_k127_10286793_16 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005603 414.0
SYD3_k127_10286793_17 Asparaginase K13051 - 3.4.19.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009342 411.0
SYD3_k127_10286793_18 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006697 409.0
SYD3_k127_10286793_19 DNA mismatch repair protein MutT K07098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008175 401.0
SYD3_k127_10286793_2 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000343 635.0
SYD3_k127_10286793_20 Benzoyl-CoA reductase subunit K04114 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002575 385.0
SYD3_k127_10286793_21 Alanine dehydrogenase/PNT, C-terminal domain K07538 - 1.1.1.368 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003457 375.0
SYD3_k127_10286793_22 glycosyl transferase family 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 359.0
SYD3_k127_10286793_23 Glycosyl transferase family 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 352.0
SYD3_k127_10286793_24 TIGRFAM RHS repeat-associated core - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 372.0
SYD3_k127_10286793_25 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 322.0
SYD3_k127_10286793_26 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004072 308.0
SYD3_k127_10286793_27 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 304.0
SYD3_k127_10286793_28 BadF/BadG/BcrA/BcrD ATPase family K04115 - 1.3.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007105 292.0
SYD3_k127_10286793_29 Belongs to the enoyl-CoA hydratase isomerase family K01715,K20036 - 4.2.1.155,4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002617 284.0
SYD3_k127_10286793_3 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 597.0
SYD3_k127_10286793_30 N-Acetylmuramoyl-L-alanine amidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002058 287.0
SYD3_k127_10286793_31 polyketide synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004665 273.0
SYD3_k127_10286793_32 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000000000009729 260.0
SYD3_k127_10286793_33 Transcriptional regulator K20968 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006089,GO:0006355,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009438,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019172,GO:0019219,GO:0019222,GO:0019243,GO:0019249,GO:0019752,GO:0031323,GO:0031326,GO:0032787,GO:0042180,GO:0042182,GO:0043436,GO:0044237,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046185,GO:0046394,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0051596,GO:0060255,GO:0061727,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901575,GO:1901576,GO:1901615,GO:1901617,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001006 258.0
SYD3_k127_10286793_34 exporters of the RND superfamily K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001029 248.0
SYD3_k127_10286793_35 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000007101 244.0
SYD3_k127_10286793_36 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001224 254.0
SYD3_k127_10286793_37 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000001701 252.0
SYD3_k127_10286793_38 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059,K00216 - 1.1.1.100,1.3.1.28 0.00000000000000000000000000000000000000000000000000000000000002253 223.0
SYD3_k127_10286793_4 2-hydroxyglutaryl-CoA dehydratase, D-component K04113 - 1.3.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009597 570.0
SYD3_k127_10286793_40 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000008402 233.0
SYD3_k127_10286793_41 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.0000000000000000000000000000000000000000000000000000001863 205.0
SYD3_k127_10286793_42 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000001475 194.0
SYD3_k127_10286793_43 domain, Protein - - - 0.0000000000000000000000000000000000000000000000002866 203.0
SYD3_k127_10286793_44 Belongs to the SUA5 family K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000007322 181.0
SYD3_k127_10286793_45 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000001119 174.0
SYD3_k127_10286793_46 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000006542 187.0
SYD3_k127_10286793_47 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.0000000000000000000000000000000000000000007776 169.0
SYD3_k127_10286793_48 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000001232 174.0
SYD3_k127_10286793_49 Pfam Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000144 154.0
SYD3_k127_10286793_5 Sterol-sensing domain of SREBP cleavage-activation K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004725 571.0
SYD3_k127_10286793_50 TIGRFAM CoA-substrate-specific enzyme activase - - - 0.0000000000000000000000000000000000000002693 169.0
SYD3_k127_10286793_51 helix_turn_helix ASNC type K03718 - - 0.0000000000000000000000000000000000000007367 154.0
SYD3_k127_10286793_52 aerobic-type carbon monoxide dehydrogenase, small subunit CoxS K03518,K04107 - 1.2.5.3,1.3.7.9 0.000000000000000000000000000000000000002504 169.0
SYD3_k127_10286793_53 Methyltransferase FkbM domain - - - 0.0000000000000000000000000000000000004393 151.0
SYD3_k127_10286793_55 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000001404 104.0
SYD3_k127_10286793_56 - - - - 0.00000000000002948 85.0
SYD3_k127_10286793_57 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.00000000000003457 78.0
SYD3_k127_10286793_59 FtsZ-dependent cytokinesis - - - 0.00000000002128 75.0
SYD3_k127_10286793_6 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004059 515.0
SYD3_k127_10286793_60 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009986,GO:0009987,GO:0016491,GO:0016620,GO:0016903,GO:0019362,GO:0019637,GO:0019674,GO:0022610,GO:0034641,GO:0043891,GO:0044237,GO:0044238,GO:0044281,GO:0044403,GO:0044406,GO:0044419,GO:0044424,GO:0044464,GO:0044650,GO:0046483,GO:0046496,GO:0051186,GO:0051704,GO:0055086,GO:0055114,GO:0071704,GO:0072524,GO:0140030,GO:0140032,GO:1901360,GO:1901564 1.2.1.12 0.00000000003329 65.0
SYD3_k127_10286793_61 Hemerythrin HHE cation binding domain - - - 0.0000000005768 67.0
SYD3_k127_10286793_63 PFAM NAD dependent epimerase dehydratase family - - - 0.0000003612 55.0
SYD3_k127_10286793_7 Enoyl-CoA hydratase/isomerase K07539 - 3.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002943 497.0
SYD3_k127_10286793_8 PFAM 3-hydroxyacyl-CoA dehydrogenase K00074,K15016 - 1.1.1.157,1.1.1.35,4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004259 510.0
SYD3_k127_10286793_9 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02472 - 1.1.1.336 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000489 486.0
SYD3_k127_10426943_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008506 596.0
SYD3_k127_10426943_1 IMG reference gene - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000435 554.0
SYD3_k127_10426943_2 IMG reference gene - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008512 534.0
SYD3_k127_10426943_3 IMG reference gene - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 478.0
SYD3_k127_10426943_4 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005802 380.0
SYD3_k127_10426943_5 IMG reference gene - - - 0.0000000000000000000000000000000000000000000000002134 182.0
SYD3_k127_10426943_6 - - - - 0.0000000000004712 78.0
SYD3_k127_10438070_0 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 451.0
SYD3_k127_10438070_1 C-terminal domain of CHU protein family - - - 0.0000000000000000000000003025 113.0
SYD3_k127_10438070_2 Protein of unknown function (DUF559) - - - 0.0000000000000000004936 93.0
SYD3_k127_10438070_3 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.000000000000007452 75.0
SYD3_k127_10438070_4 PFAM PKD domain - - - 0.000000000002534 68.0
SYD3_k127_10438070_5 PFAM PKD domain - - - 0.000000008694 59.0
SYD3_k127_10438070_6 C-terminal domain of CHU protein family - - - 0.0005817 44.0
SYD3_k127_10474531_0 PFAM Zinc carboxypeptidase - - - 3.403e-288 907.0
SYD3_k127_10474531_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 4.674e-262 825.0
SYD3_k127_10474531_2 Fumarylacetoacetase K01555 - 3.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 571.0
SYD3_k127_10474531_3 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 502.0
SYD3_k127_10474531_4 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000001114 222.0
SYD3_k127_10474531_5 PFAM MarC family integral membrane protein K05595 - - 0.00000000000000000000000000000000000000000000000000000000000007702 218.0
SYD3_k127_10474531_6 helix_turn_helix ASNC type K03718 - - 0.00000000000000000000000000000000000000000000000005674 182.0
SYD3_k127_10474531_7 Mut7-C RNAse domain - - - 0.00000000000005462 73.0
SYD3_k127_1054433_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.0 1310.0
SYD3_k127_1054433_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 2.027e-242 762.0
SYD3_k127_1054433_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002785 305.0
SYD3_k127_1054433_11 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000001004 235.0
SYD3_k127_1054433_12 photosynthesis - - - 0.0000000000000000000000000000000000000000000003681 174.0
SYD3_k127_1054433_13 TIGRFAM endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000001817 158.0
SYD3_k127_1054433_14 NUDIX domain - - - 0.00000000000000000000000000000000000000000653 162.0
SYD3_k127_1054433_15 ketosteroid isomerase - - - 0.000000000000000000000000000000000008683 141.0
SYD3_k127_1054433_16 acr, cog1399 - - - 0.0000000000000000000000000000000007439 137.0
SYD3_k127_1054433_17 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000001367 124.0
SYD3_k127_1054433_18 - - - - 0.000000000000000000000001362 122.0
SYD3_k127_1054433_19 - - - - 0.00000000000000000000000172 110.0
SYD3_k127_1054433_2 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 1.65e-228 730.0
SYD3_k127_1054433_20 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000002219 89.0
SYD3_k127_1054433_21 PGAP1-like protein - - - 0.0000000000000000009848 103.0
SYD3_k127_1054433_23 Animal haem peroxidase - - - 0.0000000001709 68.0
SYD3_k127_1054433_3 PFAM Peptidase family M20 M25 M40 K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006724 556.0
SYD3_k127_1054433_4 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 442.0
SYD3_k127_1054433_5 Hydroxymethylglutaryl-CoA lyase K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 426.0
SYD3_k127_1054433_6 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 363.0
SYD3_k127_1054433_7 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 328.0
SYD3_k127_1054433_8 Beta-lactamase class C and other penicillin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004597 318.0
SYD3_k127_1054433_9 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 295.0
SYD3_k127_10545813_0 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 4.871e-244 758.0
SYD3_k127_10545813_1 ABC transporter K06147,K11085 - - 1.258e-212 676.0
SYD3_k127_10545813_10 Asparaginase, N-terminal K01424 - 3.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000006074 257.0
SYD3_k127_10545813_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000268 228.0
SYD3_k127_10545813_12 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000000004796 191.0
SYD3_k127_10545813_13 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000005793 189.0
SYD3_k127_10545813_14 PFAM Restriction endonuclease, type I, EcoRI, R subunit Type III, Res subunit, N-terminal - - - 0.000000000000000000000000000000000008089 142.0
SYD3_k127_10545813_15 secondary active sulfate transmembrane transporter activity - - - 0.0000000000000000003271 95.0
SYD3_k127_10545813_16 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0000000002256 75.0
SYD3_k127_10545813_18 Type III restriction enzyme res subunit - - - 0.000004634 60.0
SYD3_k127_10545813_2 Beta-lactamase K01286 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003739 554.0
SYD3_k127_10545813_3 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005491 548.0
SYD3_k127_10545813_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0071704 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 456.0
SYD3_k127_10545813_5 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009228 456.0
SYD3_k127_10545813_6 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004587 376.0
SYD3_k127_10545813_7 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 367.0
SYD3_k127_10545813_8 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 297.0
SYD3_k127_10545813_9 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001596 280.0
SYD3_k127_10572949_0 ABC-type transport system involved in lipoprotein release permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 520.0
SYD3_k127_10572949_1 Belongs to the cysteine synthase cystathionine beta- synthase family K01697,K01738,K12339 - 2.5.1.47,4.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 490.0
SYD3_k127_10572949_2 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 393.0
SYD3_k127_10572949_3 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004096 279.0
SYD3_k127_10572949_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000007512 249.0
SYD3_k127_10572949_5 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001197 227.0
SYD3_k127_10572949_6 - - - - 0.000000000000000000000000000000000000000000000003398 184.0
SYD3_k127_10572949_7 hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000000004724 170.0
SYD3_k127_10572949_8 protein related to plant photosystem II stability assembly factor - - - 0.00000000000006241 83.0
SYD3_k127_10606021_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 1.08e-213 671.0
SYD3_k127_10606021_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002302 589.0
SYD3_k127_10606021_10 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007117 261.0
SYD3_k127_10606021_11 methyltransferase activity K21310 - 2.1.1.334 0.000000000000000000000000000000000000000000000000000000000000000000000001492 251.0
SYD3_k127_10606021_12 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000001041 229.0
SYD3_k127_10606021_13 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000004375 228.0
SYD3_k127_10606021_14 Response regulator of the LytR AlgR family K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000001685 229.0
SYD3_k127_10606021_15 3-demethylubiquinone-9 3-O-methyltransferase activity K12710 - - 0.0000000000000000000000000000000000000000000000000000839 194.0
SYD3_k127_10606021_16 Transcription termination factor nusG - - - 0.00000000000000000000000000000000000000005638 157.0
SYD3_k127_10606021_17 - - - - 0.0000000000000000000000000000000000000001002 169.0
SYD3_k127_10606021_18 extracellular polysaccharide biosynthetic process K07011 - - 0.000000000000000000000000000000000001833 152.0
SYD3_k127_10606021_19 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000002213 126.0
SYD3_k127_10606021_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 557.0
SYD3_k127_10606021_20 23S rRNA-intervening sequence protein - - - 0.000000000000000000000002342 107.0
SYD3_k127_10606021_21 Glycosyl transferases group 1 - - - 0.00000000000000005517 88.0
SYD3_k127_10606021_3 Male sterility protein K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008768 524.0
SYD3_k127_10606021_4 PFAM Phosphoadenosine phosphosulfate reductase K00957 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 496.0
SYD3_k127_10606021_5 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 440.0
SYD3_k127_10606021_6 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007239 402.0
SYD3_k127_10606021_7 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 325.0
SYD3_k127_10606021_8 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009044 291.0
SYD3_k127_10606021_9 Catalyzes the synthesis of activated sulfate K00860 GO:0003674,GO:0003824,GO:0004020,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237 2.7.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004083 278.0
SYD3_k127_10685566_0 PFAM GH3 auxin-responsive promoter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 557.0
SYD3_k127_10685566_1 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001841 278.0
SYD3_k127_10685566_2 ORF6N domain - - - 0.0000000000000000000000000000000000001908 145.0
SYD3_k127_10685566_3 Outer membrane protein Omp28 - - - 0.000004141 57.0
SYD3_k127_10685566_4 surface antigen - - - 0.00001434 48.0
SYD3_k127_10705218_0 Proprotein convertase P-domain - - - 1.188e-202 653.0
SYD3_k127_10705218_1 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 518.0
SYD3_k127_10705218_2 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P) K07094 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006771 320.0
SYD3_k127_10705218_3 Belongs to the glycosyl hydrolase 43 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000587 224.0
SYD3_k127_10720817_0 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 379.0
SYD3_k127_10720817_1 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002159 304.0
SYD3_k127_10720817_2 COGs COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein - - - 0.0000000000000000000000001282 125.0
SYD3_k127_10720817_3 metallopeptidase activity - - - 0.0000000001692 66.0
SYD3_k127_10748665_0 Transporter associated domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 456.0
SYD3_k127_10748665_1 Protein of unknown function (DUF3179) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009761 441.0
SYD3_k127_10748665_2 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 468.0
SYD3_k127_10748665_3 Cation transporter K11741 - - 0.000000000000000000000000000000000000000000000085 171.0
SYD3_k127_10748665_4 acetyltransferase - - - 0.000000000000000000000001855 104.0
SYD3_k127_10748665_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000007835 85.0
SYD3_k127_10748665_6 domain, Protein - - - 0.000001158 59.0
SYD3_k127_10748665_7 Pkd domain containing protein - - - 0.00004892 54.0
SYD3_k127_10769050_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 565.0
SYD3_k127_10769050_1 OstA-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 484.0
SYD3_k127_10769050_10 Biopolymer transport protein ExbD/TolR K03559 - - 0.0000000000000000000000000000000000000000000000000000000000000000634 225.0
SYD3_k127_10769050_11 M6 family metalloprotease domain protein - - - 0.000000000000000000000000000000000000000000000000000009816 199.0
SYD3_k127_10769050_12 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000000003114 163.0
SYD3_k127_10769050_13 Protein of unknown function (DUF2795) - - - 0.000000000000000000000000000000000000004416 146.0
SYD3_k127_10769050_14 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000005001 153.0
SYD3_k127_10769050_15 Tetratricopeptide repeat - - - 0.00000000000000000000005027 108.0
SYD3_k127_10769050_16 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000009118 95.0
SYD3_k127_10769050_17 Domain of unknown function (DUF4293) - - - 0.000000000000002731 81.0
SYD3_k127_10769050_2 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003509 445.0
SYD3_k127_10769050_3 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008748 322.0
SYD3_k127_10769050_4 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004159 327.0
SYD3_k127_10769050_5 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 319.0
SYD3_k127_10769050_6 COG0084 Mg-dependent DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 313.0
SYD3_k127_10769050_7 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004336 262.0
SYD3_k127_10769050_8 Ribonuclease H K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000002159 246.0
SYD3_k127_10769050_9 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000000000006915 235.0
SYD3_k127_10804848_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1254.0
SYD3_k127_10804848_1 TonB dependent receptor K16087 - - 0.0 1074.0
SYD3_k127_10804848_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000572 601.0
SYD3_k127_10804848_3 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.000000000000000000001603 97.0
SYD3_k127_10804848_4 - - - - 0.00000000000002858 81.0
SYD3_k127_10804848_5 - - - - 0.000611 46.0
SYD3_k127_10841509_0 Peptidase M16 - - - 3.638e-267 843.0
SYD3_k127_10841509_1 Leukotriene A4 hydrolase, C-terminal - - - 1.665e-212 682.0
SYD3_k127_10841509_2 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009279,GO:0009986,GO:0009987,GO:0016020,GO:0016049,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030154,GO:0030312,GO:0030313,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0040007,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044462,GO:0044464,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048869,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 379.0
SYD3_k127_10841509_3 Transporter K16264 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008661 294.0
SYD3_k127_10841509_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000002093 250.0
SYD3_k127_10841509_5 cellulase activity - - - 0.000000000000000000000000000000000000000000000000000000003963 229.0
SYD3_k127_10841509_6 LytTr DNA-binding domain K02477 - - 0.00000000000000000000000000000000000000000000002783 180.0
SYD3_k127_10841509_7 Zinc metalloprotease (Elastase) K01387 - 3.4.24.3 0.00000000000000000000001175 119.0
SYD3_k127_10879505_0 Paraquat-inducible protein A - - - 0.0000000000000000000000000000000000000000000000000000000000000000001337 241.0
SYD3_k127_10879505_2 Paraquat-inducible protein A - - - 0.00000000000000000000000000000000000001318 147.0
SYD3_k127_10879505_3 PFAM SMP-30 Gluconolaconase - - - 0.00000000005648 76.0
SYD3_k127_1094227_0 Outer membrane receptor for Fe3 -dicitrate K16091 - - 9.714e-241 768.0
SYD3_k127_1094227_1 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 1.198e-234 739.0
SYD3_k127_1094227_2 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003371 317.0
SYD3_k127_1094227_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 317.0
SYD3_k127_1094227_4 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000000000000006721 207.0
SYD3_k127_1094227_5 Pfam Bacterial-like globin K06886 - - 0.000000000000000000000000000000000000007634 149.0
SYD3_k127_1094227_6 Ethylbenzene dehydrogenase - - - 0.000000000000000000000000000000000001464 153.0
SYD3_k127_1094227_7 Cytochrome c - - - 0.000119 49.0
SYD3_k127_1109754_0 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 323.0
SYD3_k127_1109754_1 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000001113 247.0
SYD3_k127_1109754_2 water channel activity K02440,K06188 - - 0.0000000000000000000000000000000000000000000004302 174.0
SYD3_k127_1109754_3 Protein of unknown function (DUF721) - - - 0.0000000001177 65.0
SYD3_k127_1114848_0 Metallo-beta-lactamase superfamily K06136 - - 0.000002679 51.0
SYD3_k127_1114848_2 Tetratricopeptide repeat - - - 0.0007376 51.0
SYD3_k127_1282683_0 Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 544.0
SYD3_k127_1282683_1 glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004309 373.0
SYD3_k127_1282683_10 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000007969 206.0
SYD3_k127_1282683_11 Protein conserved in bacteria K09950 - - 0.0000000000000000000000000000000000000000000000000000003266 199.0
SYD3_k127_1282683_12 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000009774 198.0
SYD3_k127_1282683_13 - - - - 0.00000000000000000000000000000000000000000006149 165.0
SYD3_k127_1282683_14 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000000000000006937 102.0
SYD3_k127_1282683_15 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0006611 48.0
SYD3_k127_1282683_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003636 342.0
SYD3_k127_1282683_3 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 348.0
SYD3_k127_1282683_4 Mrr N-terminal domain K07448 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002262 275.0
SYD3_k127_1282683_5 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004255 273.0
SYD3_k127_1282683_6 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003266 265.0
SYD3_k127_1282683_7 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003477 251.0
SYD3_k127_1282683_8 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000001144 252.0
SYD3_k127_1282683_9 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000005046 233.0
SYD3_k127_1324034_0 Cytochrome C assembly protein - - - 0.0 1178.0
SYD3_k127_1324034_1 Beta-lactamase class C and other penicillin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009785 427.0
SYD3_k127_1324034_2 Heavy metal translocating P-type atpase K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000003543 234.0
SYD3_k127_1371252_0 serine-type peptidase activity K08676 - - 0.0 1461.0
SYD3_k127_1371252_1 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K11177 - 1.17.1.4 1.873e-271 852.0
SYD3_k127_1371252_2 fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 342.0
SYD3_k127_1371252_3 Belongs to the UPF0271 (lamB) family K07160 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000723 257.0
SYD3_k127_1371252_4 PFAM 2Fe-2S -binding K03518,K07302,K13483 - 1.2.5.3,1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000009824 213.0
SYD3_k127_1371252_5 PFAM Allophanate hydrolase subunit 1 K06351 - - 0.000000000000000000000000000000000000000000000000000000000001888 217.0
SYD3_k127_1371252_6 Domain of unknown function (DUF4260) - - - 0.0000000000000000000000000000000000003245 143.0
SYD3_k127_1371252_7 GIY-YIG catalytic domain K07461 - - 0.000000000000000000000000002632 115.0
SYD3_k127_1371252_8 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.00000000000003386 77.0
SYD3_k127_1401401_0 COGs COG3653 N-acyl-D-aspartate D-glutamate deacylase K06015 - 3.5.1.81 1.167e-240 756.0
SYD3_k127_1401401_1 Cation transport protein K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008157 569.0
SYD3_k127_1401401_2 TrkA-N domain K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008753 513.0
SYD3_k127_1401401_3 Peptidase, M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 443.0
SYD3_k127_1401401_4 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 339.0
SYD3_k127_1401401_5 ArgK protein K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006979 292.0
SYD3_k127_1401401_7 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.0000000000000000000000000000009714 134.0
SYD3_k127_1401401_8 PFAM Glycoside hydrolase, family 13 - - - 0.000000000000000000000000000002652 124.0
SYD3_k127_1410060_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 3.857e-280 867.0
SYD3_k127_1410060_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 1.857e-278 869.0
SYD3_k127_1410060_10 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 367.0
SYD3_k127_1410060_11 regulation of response to stimulus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000391 399.0
SYD3_k127_1410060_12 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 348.0
SYD3_k127_1410060_13 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 344.0
SYD3_k127_1410060_14 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005101 331.0
SYD3_k127_1410060_15 Patatin-like phospholipase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002295 319.0
SYD3_k127_1410060_16 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004814 271.0
SYD3_k127_1410060_17 COG2812 DNA polymerase III, gamma tau subunits K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001067 280.0
SYD3_k127_1410060_18 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000000000000000000000002393 207.0
SYD3_k127_1410060_19 outer membrane chaperone Skp (OmpH) K06142 - - 0.0000000000000000000000000000000000000000000000000000000003121 207.0
SYD3_k127_1410060_2 Dihydrolipoyl dehydrogenase K00382 - 1.8.1.4 7.379e-217 681.0
SYD3_k127_1410060_20 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000000000000000004121 205.0
SYD3_k127_1410060_21 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000001005 199.0
SYD3_k127_1410060_22 cell redox homeostasis K21636 - 1.1.98.6 0.000000000000000000000000000000000000000000000000000001164 210.0
SYD3_k127_1410060_23 extracellular polysaccharide biosynthetic process K13582 - - 0.000000000000000000000000000000000000000000000000009496 192.0
SYD3_k127_1410060_24 Capsular biosynthesis protein CpsI - - - 0.0000000000000000000000000000000000000000000000001934 189.0
SYD3_k127_1410060_25 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000001252 177.0
SYD3_k127_1410060_26 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000001527 170.0
SYD3_k127_1410060_27 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000523 179.0
SYD3_k127_1410060_28 Excinuclease ABC subunit B - - - 0.0000000000000000000000000000000000002452 152.0
SYD3_k127_1410060_29 Pfam Outer membrane protein (OmpH-like) K06142 - - 0.00000000000000000000000000000000001244 143.0
SYD3_k127_1410060_3 Gaf domain - - - 2.837e-208 673.0
SYD3_k127_1410060_30 energy transducer activity K03832 - - 0.0000000000000000000000000000000002458 139.0
SYD3_k127_1410060_31 - - - - 0.000000000000000000000000001985 119.0
SYD3_k127_1410060_32 Tetratricopeptide repeat - - - 0.000000000000000000000000003423 119.0
SYD3_k127_1410060_33 PFAM Uncharacterised protein family UPF0150 - - - 0.0000000000000000000000664 102.0
SYD3_k127_1410060_35 HicA toxin of bacterial toxin-antitoxin, - - - 0.00000000009533 63.0
SYD3_k127_1410060_36 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000001569 56.0
SYD3_k127_1410060_4 COG0076 Glutamate decarboxylase and related PLP-dependent K01593 - 4.1.1.105,4.1.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004224 518.0
SYD3_k127_1410060_5 PFAM PSP1 C-terminal conserved region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 496.0
SYD3_k127_1410060_6 Histidine ammonia-lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006739 494.0
SYD3_k127_1410060_7 Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 443.0
SYD3_k127_1410060_8 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007955 448.0
SYD3_k127_1410060_9 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006594 372.0
SYD3_k127_1423355_0 Belongs to the UbiD family K03182 - 4.1.1.98 1.166e-252 792.0
SYD3_k127_1423355_1 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000002448 250.0
SYD3_k127_1423355_2 - - - - 0.0000000000000000000000000000000001227 137.0
SYD3_k127_1423355_3 PFAM Uncharacterised protein family UPF0150 - - - 0.00000000000000002653 83.0
SYD3_k127_1423355_4 RNA-binding PUA-like domain of methyltransferase RsmF - - - 0.000000000002328 72.0
SYD3_k127_1425145_0 Biotin-lipoyl like K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 419.0
SYD3_k127_1425145_1 AcrB/AcrD/AcrF family K07239 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 393.0
SYD3_k127_1425145_2 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000007484 166.0
SYD3_k127_1431194_0 peptidase M42 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001724 256.0
SYD3_k127_1431194_1 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003859 258.0
SYD3_k127_1431194_2 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762,K13421 - 2.4.2.10,4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000001888 246.0
SYD3_k127_1431194_3 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000008026 201.0
SYD3_k127_1431194_4 Belongs to the Nudix hydrolase family - - - 0.000000000000000000000000000000000000007807 153.0
SYD3_k127_1483504_0 SprB repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005026 418.0
SYD3_k127_1483504_1 metallopeptidase activity - - - 0.00000000000005561 88.0
SYD3_k127_1483504_2 amine dehydrogenase activity - - - 0.0000002643 66.0
SYD3_k127_148949_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 4.482e-214 676.0
SYD3_k127_148949_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003629 586.0
SYD3_k127_148949_10 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000002407 240.0
SYD3_k127_148949_11 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000101 211.0
SYD3_k127_148949_12 Legume lectin domain - - - 0.00000000000000000000000000000000000000000000000000000001549 227.0
SYD3_k127_148949_13 Glyoxalase-like domain K05606 - 5.1.99.1 0.00000000000000000000000000000000000000000000000001691 183.0
SYD3_k127_148949_14 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000000000000000000000377 177.0
SYD3_k127_148949_15 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0000000000000000000000000001262 129.0
SYD3_k127_148949_16 Belongs to the peptidase S8 family K11016 - - 0.0000000000000000000000001892 124.0
SYD3_k127_148949_17 metallopeptidase activity - - - 0.00000000000000000000002654 118.0
SYD3_k127_148949_18 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000000003043 92.0
SYD3_k127_148949_19 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000000008044 78.0
SYD3_k127_148949_2 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009117 578.0
SYD3_k127_148949_20 SWIM zinc finger - - - 0.000000000000009297 77.0
SYD3_k127_148949_21 amine dehydrogenase activity K17285,K20274,K20276 - - 0.0000002746 64.0
SYD3_k127_148949_22 C-terminal domain of CHU protein family - - - 0.000007541 60.0
SYD3_k127_148949_3 tRNA synthetase class II core domain (G, H, P, S and T) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 559.0
SYD3_k127_148949_4 Zinc-uptake complex component A periplasmic K09815,K11707 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002758 346.0
SYD3_k127_148949_5 ATPases associated with a variety of cellular activities K11710,K19973 - 3.6.3.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 334.0
SYD3_k127_148949_6 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005454 317.0
SYD3_k127_148949_7 PFAM Peptidase, membrane zinc metallopeptidase K06973 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004926 273.0
SYD3_k127_148949_8 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000169 256.0
SYD3_k127_148949_9 Iron dependent repressor, metal binding and dimerisation domain K03709 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002102 248.0
SYD3_k127_1513227_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1042.0
SYD3_k127_1513227_1 PFAM Penicillin binding protein transpeptidase domain K05366 - 2.4.1.129,3.4.16.4 1.214e-249 798.0
SYD3_k127_1513227_10 chlorophyll binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007254 289.0
SYD3_k127_1513227_11 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000002737 263.0
SYD3_k127_1513227_12 S-adenosyl-l-methionine hydroxide adenosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000001932 223.0
SYD3_k127_1513227_13 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000000002104 193.0
SYD3_k127_1513227_14 Belongs to the GbsR family - - - 0.00000000000000000000000000000000000000000000000000003499 192.0
SYD3_k127_1513227_15 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000002608 104.0
SYD3_k127_1513227_16 - - - - 0.00000000000003517 76.0
SYD3_k127_1513227_2 acyl-CoA dehydrogenase K00252 - 1.3.8.6 1.554e-223 697.0
SYD3_k127_1513227_3 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008508 505.0
SYD3_k127_1513227_4 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 487.0
SYD3_k127_1513227_5 Phosphate starvation-inducible protein PhoH K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007577 425.0
SYD3_k127_1513227_6 Alpha amylase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 380.0
SYD3_k127_1513227_7 Winged helix DNA-binding domain K09927 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 369.0
SYD3_k127_1513227_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 323.0
SYD3_k127_1513227_9 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 322.0
SYD3_k127_1513282_0 Putative metal-binding motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002429 296.0
SYD3_k127_1513282_1 Thermolysin metallopeptidase, catalytic domain K01400 - 3.4.24.28 0.000000000000000000000000000000000000000000000000000000000000000002343 244.0
SYD3_k127_1513282_2 oxidoreductase activity - - - 0.000005862 59.0
SYD3_k127_1513282_3 - - - - 0.00001774 58.0
SYD3_k127_1513282_4 6-phosphogluconolactonase activity - - - 0.0005105 52.0
SYD3_k127_1527263_0 Dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 422.0
SYD3_k127_1527263_1 glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 417.0
SYD3_k127_1527263_2 Protein of unknown function (DUF4199) - - - 0.00000000001078 72.0
SYD3_k127_1527263_3 PFAM Glycosyl transferase, group 1 - - - 0.0000114 47.0
SYD3_k127_1535676_0 chlorophyll binding K03640 - - 1.777e-295 946.0
SYD3_k127_1535676_1 RNA polymerase, sigma-54 factor K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009503 575.0
SYD3_k127_1535676_10 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins - - - 0.000000000000000000000000000000000000000000000000003035 191.0
SYD3_k127_1535676_11 - - - - 0.000000000000000000000000000000000000000008604 162.0
SYD3_k127_1535676_12 - - - - 0.000000000000000000000000000000000000001068 171.0
SYD3_k127_1535676_13 transcription regulator containing HTH domain K18831 - - 0.000000000000000000000000000000000001796 141.0
SYD3_k127_1535676_14 PFAM Chloroplast import component protein (Tic20) - - - 0.0000000000000000000000000000000003457 133.0
SYD3_k127_1535676_15 NifU-like N terminal domain K04488 - - 0.00000000000000000000000001611 114.0
SYD3_k127_1535676_16 DNA-templated transcription, initiation K03088,K03091 - - 0.000000000000000000000001523 112.0
SYD3_k127_1535676_18 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03749 - - 0.0000009813 58.0
SYD3_k127_1535676_19 AntiSigma factor - - - 0.000004788 57.0
SYD3_k127_1535676_2 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005262 535.0
SYD3_k127_1535676_3 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639,K20967 - 4.1.99.22,4.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 449.0
SYD3_k127_1535676_4 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002935 332.0
SYD3_k127_1535676_5 COGs COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 331.0
SYD3_k127_1535676_6 COGs COG1975 Xanthine and CO dehydrogenase maturation factor XdhC CoxF family K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004289 301.0
SYD3_k127_1535676_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004527 263.0
SYD3_k127_1535676_8 MoaC family K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000000000007811 211.0
SYD3_k127_1535676_9 PFAM Phosphoribosyl transferase domain K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000003706 209.0
SYD3_k127_1563437_0 Large extracellular alpha-helical protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007621 574.0
SYD3_k127_1563437_1 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004936 368.0
SYD3_k127_1563437_10 amino acid activation for nonribosomal peptide biosynthetic process K01183,K01361,K20276 - 3.2.1.14,3.4.21.96 0.0004321 52.0
SYD3_k127_1563437_2 Pkd domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004737 275.0
SYD3_k127_1563437_3 YceI-like domain - - - 0.00000000000000000000000000000000000001865 169.0
SYD3_k127_1563437_4 Pkd domain containing protein - - - 0.00000000000000000000000000000001283 150.0
SYD3_k127_1563437_5 domain protein K20276 - - 0.0000000000000000000000001191 128.0
SYD3_k127_1563437_6 amine dehydrogenase activity - - - 0.000000000000000000000007263 122.0
SYD3_k127_1563437_7 Fungalysin metallopeptidase (M36) K01417 - - 0.0000000000000000005504 106.0
SYD3_k127_1563437_8 - - - - 0.0000000000000002285 97.0
SYD3_k127_1563437_9 domain, Protein K15125,K20276 - - 0.000000000155 78.0
SYD3_k127_1604280_0 FtsX-like permease family K02004 - - 2.827e-258 820.0
SYD3_k127_1604280_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 9.811e-245 766.0
SYD3_k127_1604280_2 Outer membrane protein beta-barrel family - - - 1.777e-237 760.0
SYD3_k127_1604280_3 Phospholipase/Carboxylesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 619.0
SYD3_k127_1604280_4 FAD dependent oxidoreductase K00301 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005134 397.0
SYD3_k127_1604280_5 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003445 376.0
SYD3_k127_1604280_6 deaminase K01487 - 3.5.4.3 0.0000000000000000000000000000000000000000000000000000000000000005227 222.0
SYD3_k127_1604280_7 Dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000003874 205.0
SYD3_k127_1604280_8 Protein of unknown function DUF86 - - - 0.00000000000000000000000000000000003277 139.0
SYD3_k127_1604280_9 DNA polymerase - - - 0.0000000000000000002139 93.0
SYD3_k127_161457_0 cystathionine K01758,K01760 - 4.4.1.1,4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 421.0
SYD3_k127_161457_1 homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000325 403.0
SYD3_k127_161551_0 Protein of unknown function (DUF1800) - - - 2.615e-198 635.0
SYD3_k127_161551_1 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000613 528.0
SYD3_k127_161551_2 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008725 382.0
SYD3_k127_161551_3 Acid phosphatase homologues - - - 0.000000000000000000000000000000000000000000000000000000002098 209.0
SYD3_k127_161551_4 chlorophyll binding - - - 0.0000000000000000000000000000000000000002907 160.0
SYD3_k127_161551_5 Pfam:DUF2029 - - - 0.000000000000000000000000000000000000002955 163.0
SYD3_k127_161551_6 Copper amine oxidase N-terminal domain - - - 0.000000000000000000000000000000000009983 145.0
SYD3_k127_1633984_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0 1089.0
SYD3_k127_1633984_1 cellulase activity - - - 2.425e-237 807.0
SYD3_k127_1633984_10 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 359.0
SYD3_k127_1633984_11 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006335 325.0
SYD3_k127_1633984_12 COG2040 Homocysteine selenocysteine methylase (S-methylmethionine-dependent) K00547 - 2.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007355 331.0
SYD3_k127_1633984_13 esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 292.0
SYD3_k127_1633984_14 cytochrome C peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000191 292.0
SYD3_k127_1633984_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002261 284.0
SYD3_k127_1633984_16 Ankyrin repeats (many copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003965 266.0
SYD3_k127_1633984_17 Protein of unknown function (DUF418) K07148 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004897 275.0
SYD3_k127_1633984_18 Glutamine amidotransferase class-I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002583 261.0
SYD3_k127_1633984_19 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001467 272.0
SYD3_k127_1633984_2 Two component regulator propeller - - - 4.241e-209 700.0
SYD3_k127_1633984_20 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001349 255.0
SYD3_k127_1633984_21 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000006967 209.0
SYD3_k127_1633984_22 Galactose oxidase, central domain - - - 0.00000000000000000000000000000000006242 145.0
SYD3_k127_1633984_23 CHAT domain - - - 0.0000000000000000000000000000002554 140.0
SYD3_k127_1633984_24 - - - - 0.00000000000000000000000000201 117.0
SYD3_k127_1633984_25 - - - - 0.0000000000000000000000016 113.0
SYD3_k127_1633984_26 - - - - 0.00000000000000000001105 96.0
SYD3_k127_1633984_27 PFAM blue (type 1) copper domain protein - - - 0.00000000001179 76.0
SYD3_k127_1633984_28 Belongs to the peptidase S8 family - - - 0.00000001531 66.0
SYD3_k127_1633984_29 nucleotide catabolic process - - - 0.000000287 66.0
SYD3_k127_1633984_3 cAMP biosynthetic process K21008 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004183 516.0
SYD3_k127_1633984_30 Tetratricopeptide repeat - - - 0.0001278 55.0
SYD3_k127_1633984_4 CotH kinase protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 494.0
SYD3_k127_1633984_5 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 473.0
SYD3_k127_1633984_6 Glutathione synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006159 447.0
SYD3_k127_1633984_7 ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006217 434.0
SYD3_k127_1633984_8 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007462 398.0
SYD3_k127_1633984_9 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 387.0
SYD3_k127_1654081_0 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 0.0 1015.0
SYD3_k127_1654081_1 Phenylacetic acid degradation protein PaaN K02618 - 1.2.1.91,3.3.2.12 4.867e-321 996.0
SYD3_k127_1654081_10 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 391.0
SYD3_k127_1654081_11 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 389.0
SYD3_k127_1654081_12 Endonuclease exonuclease phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 370.0
SYD3_k127_1654081_13 COG1024 Enoyl-CoA hydratase carnithine racemase K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 321.0
SYD3_k127_1654081_14 Binding-protein-dependent transport system inner membrane component K02050,K15577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001017 278.0
SYD3_k127_1654081_15 ribonuclease BN K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001451 255.0
SYD3_k127_1654081_16 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000003845 248.0
SYD3_k127_1654081_17 uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000958 209.0
SYD3_k127_1654081_18 COG1331 Highly conserved protein containing a thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000000377 198.0
SYD3_k127_1654081_19 thioesterase K07107 - - 0.000000000000000000000000000000000001547 144.0
SYD3_k127_1654081_2 TonB-dependent receptor - - - 9.845e-255 815.0
SYD3_k127_1654081_20 - - - - 0.000000000000000000000000000000000008433 145.0
SYD3_k127_1654081_21 Opacity protein - - - 0.00000000000000000002214 98.0
SYD3_k127_1654081_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008988 550.0
SYD3_k127_1654081_4 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 498.0
SYD3_k127_1654081_5 Arginine deiminase K01478 - 3.5.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008953 503.0
SYD3_k127_1654081_6 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 464.0
SYD3_k127_1654081_7 PHP domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 477.0
SYD3_k127_1654081_8 NMT1-like family K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 466.0
SYD3_k127_1654081_9 Phage shock protein A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005528 449.0
SYD3_k127_1665997_0 Major facilitator Superfamily K08222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 536.0
SYD3_k127_1665997_1 Concanavalin A-like lectin/glucanases superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 505.0
SYD3_k127_1665997_2 beta-1,4-mannooligosaccharide phosphorylase K20885 - 2.4.1.339,2.4.1.340 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 494.0
SYD3_k127_1665997_3 Pfam Oxidoreductase family, C-terminal alpha beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 346.0
SYD3_k127_1665997_4 - - - - 0.000000002589 62.0
SYD3_k127_1694340_0 heat shock protein binding - - - 8.961e-205 694.0
SYD3_k127_1694340_1 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005209 589.0
SYD3_k127_1694340_2 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 584.0
SYD3_k127_1694340_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 428.0
SYD3_k127_1694340_4 - - - - 0.0000000000000000000000000000000000000000000001632 177.0
SYD3_k127_1694340_5 heat shock protein binding - - - 0.0000000000000000000000000000002922 144.0
SYD3_k127_1694340_6 heat shock protein binding - - - 0.00000000000000000000000005507 109.0
SYD3_k127_1696441_0 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009896 292.0
SYD3_k127_1711381_0 TonB dependent receptor - - - 1.502e-302 960.0
SYD3_k127_1711381_1 ASPIC and UnbV - - - 2.949e-282 903.0
SYD3_k127_1711381_10 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000002582 196.0
SYD3_k127_1711381_2 Transport of potassium into the cell K03549 - - 3.144e-195 622.0
SYD3_k127_1711381_3 SusD family K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009726 574.0
SYD3_k127_1711381_4 SusD family K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003775 572.0
SYD3_k127_1711381_5 COG1055 Na H antiporter NhaD and related arsenite - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 520.0
SYD3_k127_1711381_6 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002148 461.0
SYD3_k127_1711381_7 K -dependent Na Ca exchanger K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 414.0
SYD3_k127_1711381_8 Inorganic pyrophosphatase K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003153 325.0
SYD3_k127_1711381_9 MafB19-like deaminase - - - 0.000000000000000000000000000000000000000000000000000000000000000000807 231.0
SYD3_k127_1784136_0 Phenylacetic acid catabolic protein K02611 - 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 293.0
SYD3_k127_1784136_1 Domain of unknown function (DUF5122) beta-propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007254 277.0
SYD3_k127_1784136_2 Domain of unknown function (DUF4294) - - - 0.000000000000000000000000000000000000000000000000000000003845 205.0
SYD3_k127_1784136_3 metal-sulfur cluster biosynthetic enzyme K02612 GO:0006082,GO:0006725,GO:0006805,GO:0008150,GO:0008152,GO:0009056,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016054,GO:0019439,GO:0019748,GO:0019752,GO:0032787,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0050896,GO:0051716,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0098754,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000434 201.0
SYD3_k127_1784136_4 Phenylacetic acid degradation B K02610 - - 0.00000000000000000000000000000000000000002439 154.0
SYD3_k127_1784136_5 Pyridoxamine 5'-phosphate oxidase K00275 - 1.4.3.5 0.00000000000009453 79.0
SYD3_k127_1784136_6 PFAM coagulation factor 5 8 type - - - 0.0000000002919 64.0
SYD3_k127_181133_0 Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 393.0
SYD3_k127_181133_1 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001703 233.0
SYD3_k127_181133_2 regulation of response to stimulus - - - 0.00000000000000000000000000000000000000000003886 187.0
SYD3_k127_181133_3 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000241 181.0
SYD3_k127_181133_4 surface antigen - - - 0.00000000000000000000000000000008714 137.0
SYD3_k127_181133_5 - - - - 0.00000000000000007607 81.0
SYD3_k127_1821037_0 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003802 443.0
SYD3_k127_1821037_1 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 399.0
SYD3_k127_1821037_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 344.0
SYD3_k127_1821037_3 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.00000000000000000000000000000000000000000000000000004165 194.0
SYD3_k127_1821037_4 histidine biosynthetic process - - - 0.00000000000000000000000000000000000000000000000405 184.0
SYD3_k127_1821037_5 Domain of unknown function (DUF4918) - - - 0.00000000000000000000000000000000000000000001216 166.0
SYD3_k127_1821037_6 - - - - 0.00000000000000000000000000000000000001352 151.0
SYD3_k127_1821037_7 - - - - 0.000000000000001148 90.0
SYD3_k127_1821037_8 - K17713 - - 0.00000000000003429 84.0
SYD3_k127_1842890_0 Cysteine synthase K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 483.0
SYD3_k127_1842890_1 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008908 313.0
SYD3_k127_1842890_2 Lipocalin-like domain K03098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001201 252.0
SYD3_k127_1842890_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000258 228.0
SYD3_k127_1842890_4 Protein of unknown function (DUF3788) - - - 0.00000000000000000000000000000000000000000004883 166.0
SYD3_k127_1918739_0 Sortilin, neurotensin receptor 3, - - - 0.0 1112.0
SYD3_k127_1918739_1 Heat shock 70 kDa protein K04043 - - 3e-323 998.0
SYD3_k127_1918739_10 Permease, YjgP YjgQ family K07091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 375.0
SYD3_k127_1918739_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004347 356.0
SYD3_k127_1918739_12 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007856 343.0
SYD3_k127_1918739_13 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005658 310.0
SYD3_k127_1918739_14 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002985 318.0
SYD3_k127_1918739_15 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 306.0
SYD3_k127_1918739_16 Conserved repeat domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006405 303.0
SYD3_k127_1918739_17 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003619 289.0
SYD3_k127_1918739_18 PFAM SpoU rRNA Methylase family - - - 0.00000000000000000000000000000000000000000000000000000001721 201.0
SYD3_k127_1918739_19 - - - - 0.000000000000000000000000000000000000000000000000000001718 205.0
SYD3_k127_1918739_2 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 8.547e-262 816.0
SYD3_k127_1918739_20 PFAM Cold-shock protein, DNA-binding - - - 0.000000000000000000000000000000000000000000000000000193 190.0
SYD3_k127_1918739_21 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000003789 176.0
SYD3_k127_1918739_22 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000104 162.0
SYD3_k127_1918739_23 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000007963 156.0
SYD3_k127_1918739_24 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000008907 148.0
SYD3_k127_1918739_25 Domain of unknown function (DUF4252) - - - 0.000000000000000000000000000000002416 135.0
SYD3_k127_1918739_26 - - - - 0.00000000000000000000000000001417 129.0
SYD3_k127_1918739_28 Anti-sigma-K factor rskA - - - 0.000000000000000000000076 108.0
SYD3_k127_1918739_29 Chaperone of endosialidase - - - 0.00000000000000000005522 104.0
SYD3_k127_1918739_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008182 593.0
SYD3_k127_1918739_30 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000006385 63.0
SYD3_k127_1918739_31 - - - - 0.000002125 55.0
SYD3_k127_1918739_32 Tetratricopeptide repeat - - - 0.00005963 48.0
SYD3_k127_1918739_4 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004003 518.0
SYD3_k127_1918739_5 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 497.0
SYD3_k127_1918739_6 PFAM Na Pi-cotransporter K03324 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007694 488.0
SYD3_k127_1918739_7 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007745 436.0
SYD3_k127_1918739_8 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 414.0
SYD3_k127_1918739_9 Putative serine dehydratase domain K20757 - 4.3.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 375.0
SYD3_k127_1956494_0 Domain of unknown function (DUF4143) K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 464.0
SYD3_k127_1956494_1 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008972 319.0
SYD3_k127_1956494_2 TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 296.0
SYD3_k127_1962546_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003571 603.0
SYD3_k127_1962546_1 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 289.0
SYD3_k127_1962546_2 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.00000000000000000000000000004873 119.0
SYD3_k127_2042085_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 1.5e-322 996.0
SYD3_k127_2042085_1 Putative esterase - - - 2.313e-297 920.0
SYD3_k127_2042085_10 WxcM-like, C-terminal - - - 0.0000000000000000000000000000000003646 135.0
SYD3_k127_2042085_11 Transposase IS200 like - - - 0.0000000000000000000000000000000007734 137.0
SYD3_k127_2042085_13 membrane - - - 0.0007654 48.0
SYD3_k127_2042085_2 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007673 395.0
SYD3_k127_2042085_3 3-keto-5-aminohexanoate cleavage protein K18013 - 2.3.1.247 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 374.0
SYD3_k127_2042085_4 Glycosyl transferase family 2 K20534 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 375.0
SYD3_k127_2042085_5 Fungalysin metallopeptidase (M36) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 351.0
SYD3_k127_2042085_6 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 340.0
SYD3_k127_2042085_7 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006665 280.0
SYD3_k127_2042085_8 ORF6N domain - - - 0.000000000000000000000000000000000000000000000000000000006396 203.0
SYD3_k127_2042085_9 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000126 179.0
SYD3_k127_2194105_0 Endoribonuclease that initiates mRNA decay K18682 - - 1.759e-247 777.0
SYD3_k127_2194105_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 579.0
SYD3_k127_2194105_2 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005296 387.0
SYD3_k127_2194105_3 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000002695 73.0
SYD3_k127_2312418_0 TonB dependent receptor - - - 1.984e-316 998.0
SYD3_k127_2312418_1 PFAM Glycosyl hydrolase family 3 C terminal domain K05349 - 3.2.1.21 9.41e-298 929.0
SYD3_k127_2312418_10 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 429.0
SYD3_k127_2312418_11 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094 423.0
SYD3_k127_2312418_12 PFAM SPFH domain Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 390.0
SYD3_k127_2312418_13 'glutamate synthase K00123,K00317,K00528,K09835 - 1.17.1.9,1.18.1.2,1.19.1.1,1.5.8.1,1.5.8.2,5.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 360.0
SYD3_k127_2312418_14 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 346.0
SYD3_k127_2312418_15 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 344.0
SYD3_k127_2312418_16 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008277 287.0
SYD3_k127_2312418_17 - - - - 0.000000000000000000000000000000000000000000000000000001712 216.0
SYD3_k127_2312418_18 Participates in the control of copper homeostasis K06201 - - 0.000000000000000000000000000000000000000000000000000006676 196.0
SYD3_k127_2312418_19 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.0000000000000000000000000000000000000000000000002221 181.0
SYD3_k127_2312418_2 Pkd domain containing protein - - - 1.509e-270 859.0
SYD3_k127_2312418_20 - - - - 0.0000000000000000000000000000000000000000000001224 175.0
SYD3_k127_2312418_21 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000000000000000001674 168.0
SYD3_k127_2312418_22 FG-GAP repeat - - - 0.000000000000000000000000000000000166 149.0
SYD3_k127_2312418_23 Transmembrane family 220, helix - - - 0.00000000000000000000000000006527 122.0
SYD3_k127_2312418_24 PFAM SPFH domain Band 7 family - - - 0.000000000000000000000733 96.0
SYD3_k127_2312418_25 Helicase K03657,K03658 - 3.6.4.12 0.00000000000002372 74.0
SYD3_k127_2312418_26 Globin - - - 0.000000000001725 71.0
SYD3_k127_2312418_27 - - - - 0.00000001409 63.0
SYD3_k127_2312418_28 CHAT domain - - - 0.0000005662 63.0
SYD3_k127_2312418_3 protein conserved in bacteria (DUF2329) - - - 8.322e-207 660.0
SYD3_k127_2312418_4 protein conserved in bacteria (DUF2329) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 593.0
SYD3_k127_2312418_5 Ragb susd K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 536.0
SYD3_k127_2312418_6 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004343 530.0
SYD3_k127_2312418_7 C4-dicarboxylate anaerobic carrier - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 511.0
SYD3_k127_2312418_8 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 483.0
SYD3_k127_2312418_9 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 453.0
SYD3_k127_2383469_0 Belongs to the peptidase M16 family K07263 - - 6.456e-251 805.0
SYD3_k127_2383469_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004263 477.0
SYD3_k127_2383469_2 PFAM Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000106 190.0
SYD3_k127_2415700_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 1.306e-293 915.0
SYD3_k127_2433898_0 Belongs to the serpin family K13963 - - 0.000000000000000000000000000000000000000000000000000000000003893 223.0
SYD3_k127_2433898_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000001368 224.0
SYD3_k127_2433898_2 PFAM Permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 0.00000000000000000000000006428 108.0
SYD3_k127_2433898_3 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000002927 103.0
SYD3_k127_248456_0 Calcineurin-like phosphoesterase - - - 3.643e-248 810.0
SYD3_k127_248456_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000003914 133.0
SYD3_k127_2518966_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 1.678e-260 811.0
SYD3_k127_2518966_1 arabinogalactan K01224 - 3.2.1.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 293.0
SYD3_k127_2518966_2 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000001231 203.0
SYD3_k127_2518966_3 PFAM PspC domain K03973 - - 0.000000000000000000000000000000000000000000000000001741 194.0
SYD3_k127_2518966_4 transcriptional regulator K10947 - - 0.00000000000000000000000000000000000000007351 154.0
SYD3_k127_2572131_0 - - - - 0.0000000000000000000000000000000000005793 153.0
SYD3_k127_2572131_1 - - - - 0.000000000000000000003043 98.0
SYD3_k127_2572131_2 - - - - 0.00000000000000000001475 94.0
SYD3_k127_2580003_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 360.0
SYD3_k127_2580003_1 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000004221 267.0
SYD3_k127_2580003_2 Putative member of DMT superfamily (DUF486) K09922 - - 0.0000000000000000000000000000000000000000000000000000000001864 205.0
SYD3_k127_2580003_3 Cellulase N-terminal ig-like domain K01179 - 3.2.1.4 0.00000008272 60.0
SYD3_k127_2580003_4 Fe2 transport system protein A K04758 - - 0.0008324 47.0
SYD3_k127_2622354_0 Catalyzes the conversion of dihydroorotate to orotate K00226,K17723 - 1.3.1.1,1.3.98.1 2.76e-231 721.0
SYD3_k127_2622354_1 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431,K12251 - 3.5.1.53,3.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 557.0
SYD3_k127_2622354_10 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000006939 66.0
SYD3_k127_2622354_2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266,K17722 - 1.3.1.1,1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 502.0
SYD3_k127_2622354_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000001203 226.0
SYD3_k127_2622354_4 Protein of unknown function (DUF2480) - - - 0.0000000000000000000000000000000000000000000000000000000000001122 217.0
SYD3_k127_2622354_5 Protein of unknown function, DUF393 - - - 0.00000000000000000000000000000004069 130.0
SYD3_k127_2622354_6 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000001643 136.0
SYD3_k127_2622354_8 23S rRNA-intervening sequence protein - - - 0.0000000000517 64.0
SYD3_k127_2622354_9 - - - - 0.0000000001291 68.0
SYD3_k127_2642130_0 MacB-like periplasmic core domain - - - 1.173e-254 809.0
SYD3_k127_2642130_1 FtsX-like permease family - - - 2.315e-231 739.0
SYD3_k127_2642130_2 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 544.0
SYD3_k127_2642130_3 TIGRFAM Acidobacterial duplicated orphan permease K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 307.0
SYD3_k127_2691555_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 1.345e-278 863.0
SYD3_k127_2691555_1 DNA polymerase III K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000647 367.0
SYD3_k127_2691555_10 Preprotein translocase SecG subunit K03075 - - 0.000000002424 58.0
SYD3_k127_2691555_2 cytochrome C peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006031 363.0
SYD3_k127_2691555_3 Membrane protein TerC, possibly involved in tellurium resistance - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004626 336.0
SYD3_k127_2691555_4 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000005002 268.0
SYD3_k127_2691555_5 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.000000000000000000000000000000000000000000004484 164.0
SYD3_k127_2691555_7 DoxX K15977 - - 0.00000000000000000000000000000235 124.0
SYD3_k127_2702755_0 Protein of unknown function (DUF2723) - - - 0.0 1176.0
SYD3_k127_2702755_1 Glucosamine-6-phosphate K02564 - 3.5.99.6 3.095e-316 979.0
SYD3_k127_2702755_10 2Fe-2S iron-sulfur cluster binding domain K02613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 331.0
SYD3_k127_2702755_11 Nuclease-related domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002991 283.0
SYD3_k127_2702755_12 Type IX secretion system membrane protein PorP/SprF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006322 257.0
SYD3_k127_2702755_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000002788 228.0
SYD3_k127_2702755_14 PFAM RNA polymerase sigma factor 70, region 4 type 2 K03088 - - 0.00000000000000000000000000000000000000000000000000000000001756 214.0
SYD3_k127_2702755_15 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000002613 203.0
SYD3_k127_2702755_16 PFAM Pseudouridine synthase, RsuA and RluB C D E F K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000004615 207.0
SYD3_k127_2702755_17 xylan catabolic process K03932 - - 0.0000000000000000000000000000000000000000000000000001599 197.0
SYD3_k127_2702755_18 Integral membrane protein (intg_mem_TP0381) - - - 0.000000000000000000000000000000000000000000168 168.0
SYD3_k127_2702755_19 SCP-like protein - - - 0.00000000000000000000000004148 114.0
SYD3_k127_2702755_2 Immunoglobulin like - - - 8.205e-225 775.0
SYD3_k127_2702755_20 - - - - 0.0000000000000000000000007995 106.0
SYD3_k127_2702755_21 TIGRFAM RHS repeat-associated core domain - - - 0.00000000000000000000001968 116.0
SYD3_k127_2702755_22 metallopeptidase activity - - - 0.000000000001239 81.0
SYD3_k127_2702755_23 oxidoreductase activity - - - 0.00000000008912 78.0
SYD3_k127_2702755_24 - - - - 0.00004849 48.0
SYD3_k127_2702755_3 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 574.0
SYD3_k127_2702755_4 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003323 546.0
SYD3_k127_2702755_5 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 467.0
SYD3_k127_2702755_6 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002776 417.0
SYD3_k127_2702755_7 Belongs to the CinA family K03742,K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009105 385.0
SYD3_k127_2702755_8 Fatty acid desaturase K00496 - 1.14.15.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006064 369.0
SYD3_k127_2702755_9 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006707 374.0
SYD3_k127_2739072_0 FAD linked oxidases, C-terminal domain - - - 0.0 1047.0
SYD3_k127_2739072_1 PFAM Pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 2.113e-269 842.0
SYD3_k127_2739072_10 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000001263 58.0
SYD3_k127_2739072_11 Putative prokaryotic signal transducing protein - - - 0.00001043 51.0
SYD3_k127_2739072_2 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004625 601.0
SYD3_k127_2739072_3 COGs COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductase beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007193 489.0
SYD3_k127_2739072_4 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005668 403.0
SYD3_k127_2739072_5 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000006051 236.0
SYD3_k127_2739072_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000006818 229.0
SYD3_k127_2739072_7 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.0000000000000000000000000000000000000111 152.0
SYD3_k127_2739072_8 COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K03088 - - 0.000000000000000000000000001869 121.0
SYD3_k127_2739072_9 CHAT domain - - - 0.00000000000000000000000001401 128.0
SYD3_k127_2758415_0 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 460.0
SYD3_k127_2758415_1 Glycosyl transferase, family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 382.0
SYD3_k127_2758415_2 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 353.0
SYD3_k127_2758415_3 PFAM Y_Y_Y domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002506 290.0
SYD3_k127_2758415_4 hydrolase K01560,K07025 - 3.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000102 244.0
SYD3_k127_2758415_5 Thioredoxin-like domain - - - 0.000000000000000004675 91.0
SYD3_k127_2758415_7 RDD family - - - 0.000006202 54.0
SYD3_k127_2758415_8 - - - - 0.0001322 50.0
SYD3_k127_2774990_0 AAA domain - - - 1.111e-291 932.0
SYD3_k127_2774990_1 Subtilase family - - - 3.001e-229 729.0
SYD3_k127_2774990_10 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) K15460 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016426,GO:0016430,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.223 0.0000000000000000000000000000000000004925 149.0
SYD3_k127_2774990_11 COG NOG19094 non supervised orthologous group - - - 0.0000000000000000000000000003713 116.0
SYD3_k127_2774990_12 - - - - 0.00000000000000000000000000392 117.0
SYD3_k127_2774990_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 532.0
SYD3_k127_2774990_3 Alanine dehydrogenase/PNT, N-terminal domain K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004706 506.0
SYD3_k127_2774990_4 PLD-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005073 462.0
SYD3_k127_2774990_5 Caspase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009959 364.0
SYD3_k127_2774990_6 B-1 B cell differentiation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003389 295.0
SYD3_k127_2774990_7 - - - - 0.0000000000000000000000000000000000000000000000000000005548 201.0
SYD3_k127_2774990_8 Dephospho-CoA kinase K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.00000000000000000000000000000000000000000000001648 177.0
SYD3_k127_2774990_9 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.0000000000000000000000000000000000000000005105 163.0
SYD3_k127_2779618_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 2.082e-205 650.0
SYD3_k127_2779618_1 SprB repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008716 550.0
SYD3_k127_2779618_10 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000005227 222.0
SYD3_k127_2779618_11 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000001725 216.0
SYD3_k127_2779618_12 DinB superfamily - - - 0.000000000000000000000000000000000000000000962 162.0
SYD3_k127_2779618_13 VTC domain - - - 0.0000000000000000000000000000000000009695 147.0
SYD3_k127_2779618_14 Group 1 truncated hemoglobin K06886 - - 0.000000000000000000000000000000001739 134.0
SYD3_k127_2779618_15 Chaperone of endosialidase - - - 0.00000000000003254 85.0
SYD3_k127_2779618_16 protein secretion - - - 0.00000000000007502 84.0
SYD3_k127_2779618_17 domain, Protein - - - 0.0000000023 70.0
SYD3_k127_2779618_18 Hep Hag repeat protein - - - 0.00009966 55.0
SYD3_k127_2779618_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005229 411.0
SYD3_k127_2779618_3 Tetratricopeptide repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000425 398.0
SYD3_k127_2779618_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007201 410.0
SYD3_k127_2779618_5 Oxidoreductase FAD-binding domain K02613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 383.0
SYD3_k127_2779618_6 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 332.0
SYD3_k127_2779618_7 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003324 287.0
SYD3_k127_2779618_8 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000008507 235.0
SYD3_k127_2779618_9 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000004517 231.0
SYD3_k127_2789234_0 Pfam Adenylate and Guanylate cyclase catalytic domain K01768,K04755 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 442.0
SYD3_k127_2789234_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 328.0
SYD3_k127_281854_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1258.0
SYD3_k127_281854_1 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 9.789e-251 781.0
SYD3_k127_281854_10 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000000000000000000001835 177.0
SYD3_k127_281854_11 methyltransferase K00559 - 2.1.1.41 0.0000000000000000000000000000000000000000002257 169.0
SYD3_k127_281854_12 ABC-type multidrug transport system ATPase and permease K06147 - - 0.0000000000000000000000000000000000000002129 164.0
SYD3_k127_281854_13 Psort location Cytoplasmic, score 8.96 - - - 0.000000000000000000000000000000000000001084 149.0
SYD3_k127_281854_14 Haemolytic K08998 - - 0.0000000000000000000000000000000538 126.0
SYD3_k127_281854_15 Sulfotransferase domain - - - 0.0000000000000000000001058 108.0
SYD3_k127_281854_16 Cytochrome c K00406,K12263 - - 0.000000000000001284 81.0
SYD3_k127_281854_17 CDP-alcohol phosphatidyltransferase - - - 0.00000000000002327 83.0
SYD3_k127_281854_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004377 486.0
SYD3_k127_281854_3 PFAM Scaffold protein Nfu NifU N terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003684 315.0
SYD3_k127_281854_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009978 298.0
SYD3_k127_281854_5 Pfam Biopterin-dependent aromatic amino acid hydroxylase K00500 - 1.14.16.1 0.00000000000000000000000000000000000000000000000000000000000000000000000001159 259.0
SYD3_k127_281854_6 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000009701 254.0
SYD3_k127_281854_7 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000014 261.0
SYD3_k127_281854_8 sulfuric ester hydrolase activity K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000003654 251.0
SYD3_k127_281854_9 nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000004987 207.0
SYD3_k127_2820183_0 Sortilin, neurotensin receptor 3, - - - 0.0 1500.0
SYD3_k127_2820183_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 586.0
SYD3_k127_2820183_10 Ion transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000885 349.0
SYD3_k127_2820183_11 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 352.0
SYD3_k127_2820183_12 YdjC-like protein K03478 - 3.5.1.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005863 326.0
SYD3_k127_2820183_13 Amidinotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 321.0
SYD3_k127_2820183_14 sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007966 304.0
SYD3_k127_2820183_15 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001211 268.0
SYD3_k127_2820183_16 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000003002 252.0
SYD3_k127_2820183_17 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000006985 220.0
SYD3_k127_2820183_18 Homocysteine S-methyltransferase K00547 - 2.1.1.10 0.000000000000000000000000000000000000000000000002872 184.0
SYD3_k127_2820183_19 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000000000000000001315 173.0
SYD3_k127_2820183_2 glucose-1-phosphate adenylyltransferase K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 533.0
SYD3_k127_2820183_20 - - - - 0.000000000000000000000000000000000000000002024 165.0
SYD3_k127_2820183_21 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000002245 149.0
SYD3_k127_2820183_22 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000001231 108.0
SYD3_k127_2820183_23 AraC family - - - 0.0000000000000000000004873 107.0
SYD3_k127_2820183_24 23S rRNA-intervening sequence protein - - - 0.00000000466 61.0
SYD3_k127_2820183_3 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003958 489.0
SYD3_k127_2820183_4 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005173 470.0
SYD3_k127_2820183_5 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 463.0
SYD3_k127_2820183_6 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 428.0
SYD3_k127_2820183_7 permease protein PstA K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004749 403.0
SYD3_k127_2820183_8 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 399.0
SYD3_k127_2820183_9 PBP superfamily domain K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004206 402.0
SYD3_k127_2822456_0 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000003708 156.0
SYD3_k127_2822456_1 COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog - - - 0.0000000000000000000000000000000001075 140.0
SYD3_k127_2822456_2 Polysaccharide biosynthesis protein - - - 0.0000000000000000001495 93.0
SYD3_k127_2822456_3 tetratricopeptide repeat - GO:0000922,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005813,GO:0005815,GO:0005819,GO:0005856,GO:0007346,GO:0008150,GO:0015630,GO:0019899,GO:0019900,GO:0030496,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051233,GO:0051726,GO:0065007,GO:0072686,GO:0097431,GO:1990023 - 0.0000000000000000003908 100.0
SYD3_k127_2822456_4 membrane protein (homolog of Drosophila rhomboid) K19225 - 3.4.21.105 0.0002654 51.0
SYD3_k127_2844595_0 Carboxypeptidase regulatory-like domain - - - 2.195e-282 886.0
SYD3_k127_2844595_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 6.061e-195 615.0
SYD3_k127_2844595_2 agmatine deiminase activity K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000534 509.0
SYD3_k127_2844595_3 COG0604 NADPH quinone reductase and related Zn-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 337.0
SYD3_k127_2844595_4 Phosphoesterase K07095 - - 0.000000000000000000000000000000000000000000000000000000000000002049 221.0
SYD3_k127_2844595_5 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000002161 196.0
SYD3_k127_2844595_6 isomerase activity - - - 0.00000000000000000000000000000000000000000004691 186.0
SYD3_k127_2844595_7 isomerase activity - - - 0.0000000000000000000000000000000000000195 168.0
SYD3_k127_2844595_9 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811 GO:0005575,GO:0005618,GO:0005623,GO:0006928,GO:0008150,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0043207,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0071944,GO:0071976 - 0.00000000001164 76.0
SYD3_k127_288460_0 Aldehyde dehydrogenase family K10217 - 1.2.1.32,1.2.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 565.0
SYD3_k127_288460_1 oligosaccharyl transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000001068 241.0
SYD3_k127_288596_0 Outer membrane protein assembly complex, YaeT protein K07277 - - 1.474e-313 983.0
SYD3_k127_288596_1 peptide-methionine (S)-S-oxide reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001553 280.0
SYD3_k127_288596_2 Transposase IS200 like - - - 0.000000000000000000000000000000000000000000000000000000000000004824 220.0
SYD3_k127_2896538_0 tRNA nucleotidyltransferase K00970,K00974 - 2.7.7.19,2.7.7.72 2.957e-206 655.0
SYD3_k127_2896538_1 Na H antiporter NhaD and related arsenite - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 554.0
SYD3_k127_2896538_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003445 527.0
SYD3_k127_2896538_3 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 482.0
SYD3_k127_2896538_4 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005196 302.0
SYD3_k127_2896538_5 - catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 0.00000000000000000000000000000000000000000000000000000000008163 212.0
SYD3_k127_2896538_6 - - - - 0.0000000000000000000000000000000000002756 148.0
SYD3_k127_2896538_7 Domain of unknown function (DUF4249) - - - 0.0000000000000000001034 100.0
SYD3_k127_2902245_0 ASPIC and UnbV - - - 2.119e-254 813.0
SYD3_k127_2902245_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 307.0
SYD3_k127_2902245_2 SPTR CHU large protein - - - 0.0000000000000000000000000000000000000000000006238 184.0
SYD3_k127_2902245_3 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000006307 75.0
SYD3_k127_2925735_0 Fe-S oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 569.0
SYD3_k127_2925735_1 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 460.0
SYD3_k127_2925735_10 Universal stress protein - - - 0.0000000000001521 80.0
SYD3_k127_2925735_2 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000001195 235.0
SYD3_k127_2925735_3 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000007304 223.0
SYD3_k127_2925735_4 extracellular nuclease K07004 - - 0.00000000000000000000000000000000000000000000000000000003731 219.0
SYD3_k127_2925735_5 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000004686 177.0
SYD3_k127_2925735_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000005835 164.0
SYD3_k127_2925735_7 Lamin Tail Domain - - - 0.0000000000000000000000000000000000000927 162.0
SYD3_k127_2925735_8 Gram-negative bacterial TonB protein C-terminal - - - 0.000000000000000000000000001285 126.0
SYD3_k127_2925735_9 Arylsulfotransferase (ASST) - - - 0.000000000000007679 76.0
SYD3_k127_2945371_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 1.353e-215 716.0
SYD3_k127_2945371_1 Amino acid permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 490.0
SYD3_k127_2945371_2 metallocarboxypeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009347 452.0
SYD3_k127_2945371_3 FIST N domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002875 420.0
SYD3_k127_2945371_4 FIST N domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003748 385.0
SYD3_k127_2945371_5 OmpA MotB domain protein K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000002764 246.0
SYD3_k127_2945371_6 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000001841 130.0
SYD3_k127_2945371_7 Pregnancy-associated plasma protein-A - - - 0.000000000000000003696 91.0
SYD3_k127_295293_0 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001288 287.0
SYD3_k127_295293_1 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000002053 167.0
SYD3_k127_295293_2 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000001338 162.0
SYD3_k127_295293_4 WG containing repeat - - - 0.000000001686 65.0
SYD3_k127_2993453_0 oxidoreductase activity - - - 0.000000000000000000000000000000000000003611 170.0
SYD3_k127_2993453_1 Domain of unknown function DUF11 - - - 0.00000000000222 82.0
SYD3_k127_2993453_2 domain protein K13735,K17624 - 3.2.1.97 0.0000742 57.0
SYD3_k127_3073215_0 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K07303 - 1.3.99.16 0.0 1189.0
SYD3_k127_3073215_1 SPTR CHU large protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 505.0
SYD3_k127_3073215_2 2Fe-2S -binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005248 265.0
SYD3_k127_3073215_3 Belongs to the glycosyl hydrolase 28 family - - - 0.0000000000000000000000000000000000000000000000000000002588 198.0
SYD3_k127_3073215_4 Protein of unknown function (DUF418) K07148 - - 0.00000000000000000000000000000000000000000000001016 186.0
SYD3_k127_3073215_5 Fibrobacter succinogenes major domain (Fib_succ_major) - - - 0.000000000000000000000000000000000000000000003577 171.0
SYD3_k127_3073215_6 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000004646 133.0
SYD3_k127_3073215_7 - - - - 0.00000000007315 63.0
SYD3_k127_3082030_0 succinate dehydrogenase, flavoprotein subunit K00239 GO:0000104,GO:0000166,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006113,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0022900,GO:0030030,GO:0030031,GO:0032991,GO:0033554,GO:0036094,GO:0040011,GO:0043167,GO:0043168,GO:0044085,GO:0044237,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044780,GO:0044781,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0048037,GO:0048870,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0070925,GO:0071840,GO:0071944,GO:0071949,GO:0071973,GO:0097159,GO:0097588,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363 1.3.5.1,1.3.5.4 3.649e-196 623.0
SYD3_k127_3082030_1 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000002229 160.0
SYD3_k127_3082030_2 Protein of unknown function DUF86 - - - 0.000000000000000000000000000000006079 130.0
SYD3_k127_3082030_3 Nucleotidyltransferase domain K07075 - - 0.000000002297 63.0
SYD3_k127_3082030_4 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.000001888 50.0
SYD3_k127_3193828_0 Prolyl endopeptidase K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 2.669e-293 918.0
SYD3_k127_3193828_1 TIGRFAM Acidobacterial duplicated orphan permease K02004 - - 7.113e-194 619.0
SYD3_k127_3193828_10 Single Cache domain 2 K07647 - 2.7.13.3 0.00000000000000000000000000000000000000000007629 180.0
SYD3_k127_3193828_11 - - - - 0.0000000000000000000000000000000000000000183 162.0
SYD3_k127_3193828_12 Cytochrome c K17222 - - 0.000000000000000000000000000000000000001883 152.0
SYD3_k127_3193828_13 tail collar domain protein - - - 0.00001227 57.0
SYD3_k127_3193828_15 Metallo-peptidase family M12 - - - 0.000592 52.0
SYD3_k127_3193828_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 529.0
SYD3_k127_3193828_3 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005323 427.0
SYD3_k127_3193828_4 DNA-damage-inducible protein D K14623 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003674 406.0
SYD3_k127_3193828_5 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 398.0
SYD3_k127_3193828_6 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006124 364.0
SYD3_k127_3193828_7 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 307.0
SYD3_k127_3193828_8 PFAM Cache K08738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004285 259.0
SYD3_k127_3193828_9 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000003158 219.0
SYD3_k127_323111_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 1.955e-284 887.0
SYD3_k127_323111_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 1.166e-235 734.0
SYD3_k127_323111_10 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008774 389.0
SYD3_k127_323111_11 transglycosylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 348.0
SYD3_k127_323111_12 PFAM Starch synthase, catalytic domain K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 346.0
SYD3_k127_323111_13 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003456 332.0
SYD3_k127_323111_14 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 314.0
SYD3_k127_323111_15 Two component transcriptional regulator, winged helix family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 309.0
SYD3_k127_323111_16 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004595 283.0
SYD3_k127_323111_17 Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002095 265.0
SYD3_k127_323111_18 Domain of unknown function (DUF4270) - - - 0.0000000000000000000000000000000000000000001 178.0
SYD3_k127_323111_19 YceI-like domain - - - 0.0000000000000000000000000000000000000000009308 163.0
SYD3_k127_323111_2 CarboxypepD_reg-like domain - - - 7.301e-225 726.0
SYD3_k127_323111_20 Domain of unknown function (DUF4290) - - - 0.00000000000000000000000000000000000000000606 162.0
SYD3_k127_323111_21 single-stranded DNA-binding protein K03111 - - 0.000000000000000000000000000000005086 131.0
SYD3_k127_323111_22 regulator of chromosome condensation, RCC1 - - - 0.000000000000000000000000001153 132.0
SYD3_k127_323111_23 single-stranded DNA-binding protein K03111 - - 0.0000000000000000000000002845 110.0
SYD3_k127_323111_25 - - - - 0.00000000000000001013 87.0
SYD3_k127_323111_26 Excinuclease ABC subunit B - - - 0.0000000003501 66.0
SYD3_k127_323111_27 domain, Protein K07277,K07278,K21449 - - 0.00003653 54.0
SYD3_k127_323111_3 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 3.661e-219 709.0
SYD3_k127_323111_4 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 2.237e-201 635.0
SYD3_k127_323111_5 Protein of unknown function (DUF819) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 564.0
SYD3_k127_323111_6 Y_Y_Y domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005062 588.0
SYD3_k127_323111_7 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 449.0
SYD3_k127_323111_8 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 409.0
SYD3_k127_323111_9 O-Antigen ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 399.0
SYD3_k127_3239145_0 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 321.0
SYD3_k127_3239145_1 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 305.0
SYD3_k127_3239145_2 Bax inhibitor 1 like - - - 0.000000000000000000000000000000000000000000000000000000004449 205.0
SYD3_k127_3239145_3 TonB family domain protein - - - 0.0000000000000000000000000000000000000000003479 164.0
SYD3_k127_327277_0 Chaperone of endosialidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003752 348.0
SYD3_k127_327277_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000003841 236.0
SYD3_k127_327277_2 Domain of unknown function (DUF892) - - - 0.00000000000000000000000000000000000000006269 158.0
SYD3_k127_327277_3 methyltransferase - - - 0.00000000000000000000000000000000005282 143.0
SYD3_k127_3288304_0 Sodium:sulfate symporter transmembrane region K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007325 603.0
SYD3_k127_3288304_1 Flavin-binding monooxygenase-like K07222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008999 464.0
SYD3_k127_3288304_2 Proprotein convertase P-domain - - - 0.000000000000000000000000000000000000000000000000000000000000001848 236.0
SYD3_k127_3288304_3 branched-chain-amino-acid transaminase activity K00824,K00826 - 2.6.1.21,2.6.1.42 0.0000000000000000000000000000000000000000000000000000000007075 210.0
SYD3_k127_3288304_4 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000002156 200.0
SYD3_k127_3411207_0 Fungalysin metallopeptidase (M36) - - - 1.031e-247 807.0
SYD3_k127_3411207_1 Fungalysin metallopeptidase (M36) - - - 7.333e-243 793.0
SYD3_k127_3411207_10 PKD domain - - - 0.000000000000000000000000000000007731 148.0
SYD3_k127_3411207_11 - - - - 0.00000000000000000000001422 108.0
SYD3_k127_3411207_12 Protein of unknown function (DUF998) - - - 0.000000000000000000001635 102.0
SYD3_k127_3411207_13 CAAX protease self-immunity - - - 0.0000000000468 64.0
SYD3_k127_3411207_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 631.0
SYD3_k127_3411207_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 626.0
SYD3_k127_3411207_4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000738 286.0
SYD3_k127_3411207_5 Response regulator of the LytR AlgR family K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000995 282.0
SYD3_k127_3411207_6 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003697 296.0
SYD3_k127_3411207_7 Activator of Hsp90 ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005042 243.0
SYD3_k127_3411207_8 Y_Y_Y domain - - - 0.000000000000000000000000000000000000000000000000000000003121 209.0
SYD3_k127_3411207_9 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000008961 175.0
SYD3_k127_3433344_0 magnesium chelatase K07391 - - 5.016e-231 724.0
SYD3_k127_3433344_1 Oxidoreductase domain protein - - - 2.765e-202 635.0
SYD3_k127_3433344_10 magnesium chelatase K07391 - - 0.00001094 48.0
SYD3_k127_3433344_11 Pfam ORF6N domain - - - 0.0002368 47.0
SYD3_k127_3433344_2 in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine K15777 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007075 463.0
SYD3_k127_3433344_3 Nucleoside H+ symporter K05820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 296.0
SYD3_k127_3433344_4 Belongs to the arylamine N-acetyltransferase family K00675 - 2.3.1.118 0.0000000000000000000000000000000000000000000000000000000000000000000000000003092 263.0
SYD3_k127_3433344_5 ORF6N domain - - - 0.00000000000000000000000002878 113.0
SYD3_k127_3433344_6 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0000000000000000001012 93.0
SYD3_k127_3433344_7 - - - - 0.00000000000000006007 81.0
SYD3_k127_3433344_8 YtxH-like protein - - - 0.00000000001318 67.0
SYD3_k127_3433344_9 Metallo-beta-lactamase superfamily - - - 0.000000009053 58.0
SYD3_k127_346432_0 PFAM Allophanate hydrolase subunit 2 K06350 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000196 255.0
SYD3_k127_346432_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0000000000000000000000000000003682 123.0
SYD3_k127_346432_2 Protein of unknown function DUF86 - - - 0.000000000000000000000000000001074 125.0
SYD3_k127_346432_3 Nucleotidyltransferase domain - - - 0.00002766 52.0
SYD3_k127_362688_0 PFAM NAD dependent epimerase dehydratase family K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004521 520.0
SYD3_k127_362688_1 export protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007186 507.0
SYD3_k127_362688_2 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 481.0
SYD3_k127_362688_3 3-Deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 305.0
SYD3_k127_362688_4 - - - - 0.000000000000000000000000000000000000000000000000000000003953 208.0
SYD3_k127_362688_5 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000002633 97.0
SYD3_k127_365342_0 Cys/Met metabolism PLP-dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009775 488.0
SYD3_k127_365342_1 Belongs to the peptidase S8 family K05996 - 3.4.17.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006155 469.0
SYD3_k127_365342_2 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 361.0
SYD3_k127_365342_3 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004653 302.0
SYD3_k127_365342_4 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000002345 203.0
SYD3_k127_365342_5 shikimate kinase activity K00891,K13829 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71,4.2.3.4 0.00000000000000000000000000004198 124.0
SYD3_k127_365342_6 Preprotein translocase subunit YajC K03210 - - 0.000000000000000001437 89.0
SYD3_k127_3665032_0 Prolyl oligopeptidase family - - - 0.0 1185.0
SYD3_k127_3665032_1 COG1233 Phytoene dehydrogenase and related K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 586.0
SYD3_k127_3665032_10 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000000000000000000000001323 184.0
SYD3_k127_3665032_11 SRPBCC domain-containing protein - - - 0.0000000000000000000000000000000000000000002212 164.0
SYD3_k127_3665032_12 Transcriptional regulator - - - 0.0000000003234 61.0
SYD3_k127_3665032_2 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004453 554.0
SYD3_k127_3665032_3 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 552.0
SYD3_k127_3665032_4 PFAM Squalene phytoene synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 321.0
SYD3_k127_3665032_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 315.0
SYD3_k127_3665032_6 PFAM MerR family regulatory protein K22491 - - 0.00000000000000000000000000000000000000000000000000000000000001339 226.0
SYD3_k127_3665032_7 hydroxylase K15746 - 1.14.15.24 0.00000000000000000000000000000000000000000000000000000000000002025 217.0
SYD3_k127_3665032_8 lycopene cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000001965 219.0
SYD3_k127_3665032_9 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000003754 189.0
SYD3_k127_3670797_0 protein involved in exopolysaccharide biosynthesis - - - 5.349e-231 736.0
SYD3_k127_3670797_1 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 389.0
SYD3_k127_3670797_2 IMG reference gene - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 344.0
SYD3_k127_3670797_3 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K04757 - 2.7.11.1 0.00000000000000000000000000000000001184 139.0
SYD3_k127_3670797_4 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA - - - 0.0000000000000000000000000000002564 128.0
SYD3_k127_371636_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 488.0
SYD3_k127_371636_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007131 462.0
SYD3_k127_371636_10 - - - - 0.000000000003651 72.0
SYD3_k127_371636_2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 467.0
SYD3_k127_371636_3 4 iron, 4 sulfur cluster binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 373.0
SYD3_k127_371636_4 Proton-conducting membrane transporter K12141 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000466 323.0
SYD3_k127_371636_5 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005651 322.0
SYD3_k127_371636_6 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004726 304.0
SYD3_k127_371636_7 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002393 244.0
SYD3_k127_371636_8 metallopeptidase activity K01179,K03768,K08738 - 3.2.1.4,5.2.1.8 0.000000000000000000000000000000000000000000000000000000009144 222.0
SYD3_k127_371636_9 Cytochrome C oxidase, cbb3-type, subunit III K00368,K00405 - 1.7.2.1 0.00000000000000000000000003488 112.0
SYD3_k127_376967_0 Mate efflux family protein K03327 - - 1.282e-245 764.0
SYD3_k127_376967_1 PFAM RNA polymerase sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005077 581.0
SYD3_k127_376967_2 OmpA MotB domain protein K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001421 284.0
SYD3_k127_376967_3 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001001 282.0
SYD3_k127_376967_4 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000261 256.0
SYD3_k127_376967_5 Predicted membrane protein (DUF2238) K08984 - - 0.00000000000000000000000000000000000000000000000000000000000004189 217.0
SYD3_k127_376967_6 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000000000002688 200.0
SYD3_k127_376967_7 OsmC-like protein - - - 0.000000000000000000000000000000000000000000000000003827 184.0
SYD3_k127_376967_8 - - - - 0.000000000000000000007641 98.0
SYD3_k127_376967_9 COG3794 Plastocyanin - - - 0.000801 49.0
SYD3_k127_3773777_0 PFAM Sodium Bile acid symporter family K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 561.0
SYD3_k127_3773777_1 PhoD-like phosphatase K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000087 467.0
SYD3_k127_3773777_2 PAP2 superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 414.0
SYD3_k127_3773777_3 Belongs to the MIP aquaporin (TC 1.A.8) family K02440 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 364.0
SYD3_k127_3773777_4 PFAM Bacterial regulatory protein, arsR family - - - 0.0000000000000000000000000000000000000000000001963 169.0
SYD3_k127_3773777_5 DinB family - - - 0.0000000000000000000000000000003122 129.0
SYD3_k127_3773777_6 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000002499 53.0
SYD3_k127_3818473_0 TIGRFAM dihydroorotase, multifunctional complex type K01464 - 3.5.2.2 3.539e-224 701.0
SYD3_k127_3818473_1 Permease for cytosine/purines, uracil, thiamine, allantoin K03457 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 523.0
SYD3_k127_3818473_2 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005424 339.0
SYD3_k127_3818473_3 Toxic component of a toxin-antitoxin (TA) module. An RNase K07065 - - 0.00000000000000000000000001533 113.0
SYD3_k127_3818473_4 - - - - 0.0000000000000004062 82.0
SYD3_k127_3818473_5 Pfam Carbon-nitrogen hydrolase K01431,K12251 - 3.5.1.53,3.5.1.6 0.0000002604 52.0
SYD3_k127_3830646_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K08314 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 340.0
SYD3_k127_3830646_1 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007803 297.0
SYD3_k127_3830646_2 phosphorylase K00757 - 2.4.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001881 269.0
SYD3_k127_3830646_3 Pseudouridine synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000002594 233.0
SYD3_k127_3830646_4 ArsC family K00537 - 1.20.4.1 0.0000000000000000000000000000000007301 133.0
SYD3_k127_3830646_5 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 0.000002014 51.0
SYD3_k127_3908230_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 3.403e-198 628.0
SYD3_k127_3908230_1 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 597.0
SYD3_k127_3908230_10 - - - - 0.00000000000000000000000000000000000000000000000007578 186.0
SYD3_k127_3908230_11 ABC-type transport system involved in cytochrome c biogenesis permease component K02194 - - 0.00000000000000000000000000000000000000000009304 169.0
SYD3_k127_3908230_12 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000164 164.0
SYD3_k127_3908230_13 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000002472 133.0
SYD3_k127_3908230_14 TIGRFAM Gliding motility-associated protein, GldC - - - 0.0000000000000000000000000000001646 126.0
SYD3_k127_3908230_15 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000001228 119.0
SYD3_k127_3908230_16 Leucine Rich Repeat - - - 0.00000000000302 81.0
SYD3_k127_3908230_17 - - - - 0.00001622 51.0
SYD3_k127_3908230_2 PFAM MgsA AAA ATPase C terminal K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008034 557.0
SYD3_k127_3908230_3 Iron/manganese superoxide dismutases, alpha-hairpin domain K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008993 385.0
SYD3_k127_3908230_4 PFAM Cytochrome c assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006605 366.0
SYD3_k127_3908230_5 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008962 332.0
SYD3_k127_3908230_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001343 250.0
SYD3_k127_3908230_7 Belongs to the peptidase S1B family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000456 248.0
SYD3_k127_3908230_8 Transcriptional regulator, asnc family K03719,K05800 - - 0.000000000000000000000000000000000000000000000000000000000000000000007374 236.0
SYD3_k127_3908230_9 acyl protein synthase acyl-CoA reductase-like protein - - - 0.00000000000000000000000000000000000000000000000001118 182.0
SYD3_k127_3922752_0 Diguanylate cyclase K15975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 430.0
SYD3_k127_3922752_1 PFAM TonB-dependent Receptor Plug - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 401.0
SYD3_k127_3922752_2 PFAM phospholipase Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006383 297.0
SYD3_k127_3922752_3 YceI-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001209 265.0
SYD3_k127_3922752_4 AP endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001293 258.0
SYD3_k127_3922752_5 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000007681 235.0
SYD3_k127_3922752_6 ABC-type Na efflux pump, permease component K01992 - - 0.000000000000000000000000000000000000000000000000000009819 195.0
SYD3_k127_3922752_7 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000003186 181.0
SYD3_k127_3951423_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1255.0
SYD3_k127_3951423_1 COGs COG1629 Outer membrane receptor protein mostly Fe transport - - - 0.0 1190.0
SYD3_k127_3951423_10 heme binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000006081 239.0
SYD3_k127_3951423_11 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218,K03437 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000008497 229.0
SYD3_k127_3951423_12 ABC-type multidrug transport system, ATPase and permease K06147 - - 0.00000000000000000000000000000000000000000000000000003118 195.0
SYD3_k127_3951423_13 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000002144 194.0
SYD3_k127_3951423_14 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000000000000000002634 175.0
SYD3_k127_3951423_15 PFAM Biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000085 180.0
SYD3_k127_3951423_16 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000000000251 168.0
SYD3_k127_3951423_17 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000007016 153.0
SYD3_k127_3951423_18 Fibronectin type III domain - - - 0.0000000000000000000000000000001 147.0
SYD3_k127_3951423_19 Amidohydrolase family - - - 0.00000000000000000000000001236 127.0
SYD3_k127_3951423_2 Periplasmic component of the Tol biopolymer transport system - - - 1.694e-312 989.0
SYD3_k127_3951423_20 SprB repeat - - - 0.0000000000000000000000003756 119.0
SYD3_k127_3951423_22 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.00000000000000000000003318 116.0
SYD3_k127_3951423_23 fibronectin type III domain protein - - - 0.000000000000000000001806 113.0
SYD3_k127_3951423_24 amine dehydrogenase activity K00504,K01181,K15531 GO:0005575,GO:0016020 1.14.17.3,3.2.1.156,3.2.1.8 0.0000000000004257 83.0
SYD3_k127_3951423_25 rhs-related protein - - - 0.00000000008995 75.0
SYD3_k127_3951423_26 CHAD domain - - - 0.0000000003013 70.0
SYD3_k127_3951423_27 Fibronectin type III domain - - - 0.000009656 59.0
SYD3_k127_3951423_28 Pkd domain containing protein - - - 0.00002081 58.0
SYD3_k127_3951423_3 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.168e-294 917.0
SYD3_k127_3951423_4 Fungalysin metallopeptidase (M36) - - - 8.069e-270 871.0
SYD3_k127_3951423_5 COGs COG1914 Mn2 and Fe2 transporter of the NRAMP family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 480.0
SYD3_k127_3951423_6 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000715 406.0
SYD3_k127_3951423_7 COGs COG5267 conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 409.0
SYD3_k127_3951423_8 (twin-arginine translocation) pathway signal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002931 394.0
SYD3_k127_3951423_9 usher protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002808 284.0
SYD3_k127_4001264_0 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 1.826e-199 635.0
SYD3_k127_4001264_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000009649 212.0
SYD3_k127_4001264_2 Protein of unknown function (DUF3467) - - - 0.0000000000000000000000000000000000000000000009311 169.0
SYD3_k127_4029410_0 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 9.708e-243 768.0
SYD3_k127_4029410_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000001316 240.0
SYD3_k127_4029410_2 Response regulator of the LytR AlgR family - - - 0.000000000000000000000000000000000000000000000000000000000886 209.0
SYD3_k127_4029410_3 - - - - 0.0000000000000004967 86.0
SYD3_k127_4083734_0 PFAM Aminotransferase class I and II K00639 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005326 603.0
SYD3_k127_4083734_1 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004259 464.0
SYD3_k127_4083734_2 Cystathionine beta-synthase K01697,K01738 - 2.5.1.47,4.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 413.0
SYD3_k127_4083734_3 Protein of unknown function (DUF2911) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 372.0
SYD3_k127_4083734_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000009843 235.0
SYD3_k127_4090595_0 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 1.197e-284 914.0
SYD3_k127_4090595_1 Glutamate formimidoyltransferase K00603,K13990 - 2.1.2.5,4.3.1.4 1.103e-226 714.0
SYD3_k127_4090595_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004914 353.0
SYD3_k127_4090595_3 surface antigen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009596 324.0
SYD3_k127_4090595_4 tail collar domain protein K01406,K21449 - 3.4.24.40 0.0000000000000000000000000000000000000000000003396 171.0
SYD3_k127_4090595_5 PFAM GIY-YIG catalytic domain K07461 - - 0.0000000001567 65.0
SYD3_k127_4096171_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 447.0
SYD3_k127_4096171_1 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 389.0
SYD3_k127_4096171_10 - - - - 0.00000000000000000000000001421 117.0
SYD3_k127_4096171_11 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000003515 106.0
SYD3_k127_4096171_12 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain - - - 0.00000000006279 69.0
SYD3_k127_4096171_13 LytTr DNA-binding domain - - - 0.0000000398 62.0
SYD3_k127_4096171_14 Pfam:HipA_N K07154 - 2.7.11.1 0.0000001271 55.0
SYD3_k127_4096171_2 SprB repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 419.0
SYD3_k127_4096171_3 COGs COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain - - - 0.00000000000000000000000000000000000000000000000000000000000000005773 235.0
SYD3_k127_4096171_4 Pkd domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001772 240.0
SYD3_k127_4096171_5 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000000000000000000000000000000000003501 209.0
SYD3_k127_4096171_6 ORF6N domain - - - 0.000000000000000000000000000000000000000004098 158.0
SYD3_k127_4096171_7 Tetratricopeptide repeat - - - 0.000000000000000000000000000000008299 137.0
SYD3_k127_4096171_8 Thioredoxin K01829 - 5.3.4.1 0.000000000000000000000000000000009445 134.0
SYD3_k127_4096171_9 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.000000000000000000000000001438 120.0
SYD3_k127_4103669_0 Aldehyde dehydrogenase family K00140,K22187 - 1.2.1.18,1.2.1.27 1.086e-221 696.0
SYD3_k127_4103669_1 adenosylmethionine-8-amino-7-oxononanoate transaminase activity K15372 - 2.6.1.55 1.071e-195 619.0
SYD3_k127_4103669_10 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 307.0
SYD3_k127_4103669_11 C4-type zinc ribbon domain K07164 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001169 273.0
SYD3_k127_4103669_12 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000007369 198.0
SYD3_k127_4103669_13 Belongs to the serpin family K13963 - - 0.000000000000000000000000000000000000005452 153.0
SYD3_k127_4103669_14 Glycosyl hydrolases family 8 - - - 0.0000000000000000000000000000000000002288 168.0
SYD3_k127_4103669_15 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.000000000000000000000000000000000003192 139.0
SYD3_k127_4103669_16 PFAM S23 ribosomal protein - - - 0.0000000000000000000000000000000002251 135.0
SYD3_k127_4103669_17 self proteolysis K03404,K07114,K15125,K20276 - 6.6.1.1 0.000000000000000000000000000000002528 154.0
SYD3_k127_4103669_18 - - - - 0.0000000000000000004714 107.0
SYD3_k127_4103669_19 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000002048 91.0
SYD3_k127_4103669_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 582.0
SYD3_k127_4103669_20 PFAM SMP-30 Gluconolaconase - - - 0.00000000000003541 91.0
SYD3_k127_4103669_21 - - - - 0.000000003494 63.0
SYD3_k127_4103669_22 COG1520 FOG WD40-like repeat - - - 0.0008231 51.0
SYD3_k127_4103669_3 Immunoglobulin-like repeats containing protein domain K20276 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 600.0
SYD3_k127_4103669_4 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 470.0
SYD3_k127_4103669_5 PFAM Alanine dehydrogenase PNT K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 396.0
SYD3_k127_4103669_6 belongs to the CobB CobQ family K06873 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 395.0
SYD3_k127_4103669_7 TPR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005899 382.0
SYD3_k127_4103669_8 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 329.0
SYD3_k127_4103669_9 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008245 327.0
SYD3_k127_4107471_0 MacB-like periplasmic core domain - - - 0.0 1068.0
SYD3_k127_4107471_1 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006844 317.0
SYD3_k127_4107471_2 phosphate-selective porin O and P - - - 0.000002515 53.0
SYD3_k127_4117509_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.745e-264 823.0
SYD3_k127_4117509_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 4.131e-250 790.0
SYD3_k127_4117509_10 PFAM Rhodanese-like domain - - - 0.0000000000000000000000000000000000001853 143.0
SYD3_k127_4117509_11 Thioredoxin K03671 - - 0.0000000000000000000000000000000000006263 141.0
SYD3_k127_4117509_12 Protein of unknown function (DUF1232) - - - 0.000000000000000000000000000000000009939 139.0
SYD3_k127_4117509_13 COGs COG0607 Rhodanese-related sulfurtransferase - - - 0.0000000000000000000000000000001005 128.0
SYD3_k127_4117509_14 Rhodanese-like domain - - - 0.000000000000000000000000000001669 122.0
SYD3_k127_4117509_15 - - - - 0.0000000000000000000000005105 109.0
SYD3_k127_4117509_16 - - - - 0.0000000000000000000001296 98.0
SYD3_k127_4117509_17 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000000002011 89.0
SYD3_k127_4117509_18 ATP synthase, delta epsilon subunit, beta-sandwich domain protein K02114 - - 0.0000000000000000002417 89.0
SYD3_k127_4117509_19 PFAM plasmid K06218 - - 0.00000000000000000035 90.0
SYD3_k127_4117509_2 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 1.577e-228 728.0
SYD3_k127_4117509_20 Chaperone of endosialidase - - - 0.00000000000005107 86.0
SYD3_k127_4117509_3 Belongs to the thiolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004173 579.0
SYD3_k127_4117509_4 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 347.0
SYD3_k127_4117509_5 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 304.0
SYD3_k127_4117509_6 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000001525 244.0
SYD3_k127_4117509_7 HAD superfamily haloacid dehalogenase hydrolase of Pasteurellaceae UniRef RepID A7JX35_PASHA K07025,K08723 - 3.1.3.5 0.0000000000000000000000000000000000000000000000001042 187.0
SYD3_k127_4117509_8 Putative auto-transporter adhesin, head GIN domain - - - 0.0000000000000000000000000000000000000000004727 167.0
SYD3_k127_4117509_9 - - - - 0.00000000000000000000000000000000000000001459 175.0
SYD3_k127_4129216_0 beta-lactamase - - - 3.312e-217 685.0
SYD3_k127_4129216_1 phosphoserine phosphatase activity - - - 0.0000000000000000000000000000000001982 145.0
SYD3_k127_4140397_0 Tricorn protease homolog K08676 - - 0.0 1255.0
SYD3_k127_4140397_1 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 495.0
SYD3_k127_4226032_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2278.0
SYD3_k127_4226032_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2173.0
SYD3_k127_4226032_10 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006276 311.0
SYD3_k127_4226032_11 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000007549 254.0
SYD3_k127_4226032_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003002 262.0
SYD3_k127_4226032_13 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000002117 205.0
SYD3_k127_4226032_14 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000000000000000000001358 202.0
SYD3_k127_4226032_15 methyltransferase - - - 0.0000000000000000000000000000000000000000000000004141 179.0
SYD3_k127_4226032_16 SusD family K21572 - - 0.0000000000000000000000000000000000000000000001939 184.0
SYD3_k127_4226032_17 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000001993 165.0
SYD3_k127_4226032_18 PFAM Sigma 54 modulation protein S30EA ribosomal protein K05808 - - 0.0000000000000000000000000000002688 125.0
SYD3_k127_4226032_19 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000008478 87.0
SYD3_k127_4226032_2 TonB dependent receptor - - - 1.162e-251 790.0
SYD3_k127_4226032_20 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000000001482 66.0
SYD3_k127_4226032_22 - - - - 0.0000002405 55.0
SYD3_k127_4226032_3 PFAM TonB-dependent Receptor Plug Domain - - - 1.055e-234 762.0
SYD3_k127_4226032_4 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 3.823e-219 683.0
SYD3_k127_4226032_5 Starch-binding associating with outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007345 561.0
SYD3_k127_4226032_6 Arylsulfotransferase (ASST) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006538 530.0
SYD3_k127_4226032_7 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 449.0
SYD3_k127_4226032_8 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 343.0
SYD3_k127_4226032_9 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 309.0
SYD3_k127_4249443_0 COG2373 Large extracellular alpha-helical protein - - - 0.0 1463.0
SYD3_k127_4249443_1 TonB-dependent receptor plug domain K02014 - - 1.092e-300 949.0
SYD3_k127_4249443_10 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005548 427.0
SYD3_k127_4249443_11 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005242 405.0
SYD3_k127_4249443_12 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 387.0
SYD3_k127_4249443_13 4-hydroxybenzoate polyprenyltransferase K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 350.0
SYD3_k127_4249443_14 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family K07264 - 2.4.2.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 349.0
SYD3_k127_4249443_15 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 325.0
SYD3_k127_4249443_16 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 301.0
SYD3_k127_4249443_17 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007786 299.0
SYD3_k127_4249443_18 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009602 274.0
SYD3_k127_4249443_19 Ribonuclease H-like K09776 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002422 244.0
SYD3_k127_4249443_2 Belongs to the formate--tetrahydrofolate ligase family K01938 GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.3 1.022e-266 831.0
SYD3_k127_4249443_20 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) K06169 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002253 245.0
SYD3_k127_4249443_21 Belongs to the SUA5 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000002111 238.0
SYD3_k127_4249443_22 alpha beta - - - 0.00000000000000000000000000000000000000000000000000000000000000001989 248.0
SYD3_k127_4249443_23 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000001172 212.0
SYD3_k127_4249443_24 CHAT domain - - - 0.00000000000000000000000000000000000000000000000000000000003714 233.0
SYD3_k127_4249443_25 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000002013 213.0
SYD3_k127_4249443_26 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.0000000000000000000000000000000000000000000000001432 185.0
SYD3_k127_4249443_27 Putative MetA-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000006859 175.0
SYD3_k127_4249443_28 YjbR - - - 0.000000000000000000000000000000000000000002038 157.0
SYD3_k127_4249443_29 Protein of unknown function (DUF1573) - - - 0.000000000000000000000000000000000000000188 156.0
SYD3_k127_4249443_3 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 4.7e-201 632.0
SYD3_k127_4249443_30 WbqC-like protein family - - - 0.000000000000000000000000000000000000003118 158.0
SYD3_k127_4249443_31 anaphase-promoting complex binding - - - 0.0000000000000000000000000000002998 138.0
SYD3_k127_4249443_32 Domain of unknown function (DUF4340) - - - 0.00000000000000000000000000000418 132.0
SYD3_k127_4249443_33 COG0607 Rhodanese-related sulfurtransferase - - - 0.00000000000000000000002943 104.0
SYD3_k127_4249443_34 Subtilase family - - - 0.000000000000000000001187 109.0
SYD3_k127_4249443_35 Restriction endonuclease K07448 - - 0.000000000000001146 89.0
SYD3_k127_4249443_37 - - - - 0.000000000001615 79.0
SYD3_k127_4249443_38 MORN repeat protein - - - 0.0000000002834 69.0
SYD3_k127_4249443_4 Peptidase M16 inactive domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 626.0
SYD3_k127_4249443_40 - - - - 0.00000008511 62.0
SYD3_k127_4249443_41 serine threonine protein kinase - - - 0.000003033 59.0
SYD3_k127_4249443_5 PFAM Peptidase M16 inactive domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008638 564.0
SYD3_k127_4249443_6 DNA polymerase K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 550.0
SYD3_k127_4249443_7 PAP2 superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 496.0
SYD3_k127_4249443_8 Fatty acid hydroxylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 493.0
SYD3_k127_4249443_9 ABC-type uncharacterized transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 498.0
SYD3_k127_4276741_0 STAS domain K03321 - - 1.666e-223 702.0
SYD3_k127_4276741_1 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 606.0
SYD3_k127_4276741_10 Cytochrome c - - - 0.0000000000000000000000000000000000000001329 159.0
SYD3_k127_4276741_11 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.000000000000000000000000000000000000001358 155.0
SYD3_k127_4276741_12 Cytochrome c - - - 0.0000000000000000000000000001509 119.0
SYD3_k127_4276741_13 tRNA_anti-like - - - 0.00000000000000000004591 95.0
SYD3_k127_4276741_14 Plasmid stabilization system - - - 0.0000000004175 64.0
SYD3_k127_4276741_15 - - - - 0.000000007942 59.0
SYD3_k127_4276741_16 - - - - 0.00008862 53.0
SYD3_k127_4276741_2 Y_Y_Y domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000687 556.0
SYD3_k127_4276741_3 POT family K03305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007498 473.0
SYD3_k127_4276741_4 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 417.0
SYD3_k127_4276741_5 ATPase (AAA superfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 400.0
SYD3_k127_4276741_6 Protein of unknown function (DUF1015) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005463 255.0
SYD3_k127_4276741_7 Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000001035 224.0
SYD3_k127_4276741_8 PFAM Lipid polyisoprenoid-binding, YceI-like - - - 0.00000000000000000000000000000000000000000000000000006768 192.0
SYD3_k127_4276741_9 YceI-like domain - - - 0.00000000000000000000000000000000000000000000004604 177.0
SYD3_k127_4300455_0 AsmA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 347.0
SYD3_k127_4300455_1 phospholipase Carboxylesterase - - - 0.00000000000000000000000000000000000000000000003062 182.0
SYD3_k127_4300455_2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000007225 143.0
SYD3_k127_4300455_3 Belongs to the ompA family - - - 0.00000000000000000000000000006329 117.0
SYD3_k127_4302216_0 Methionine synthase K00548 - 2.1.1.13 0.0 1615.0
SYD3_k127_4302216_1 Inorganic H+ pyrophosphatase K15987 - 3.6.1.1 0.0 1043.0
SYD3_k127_4302216_10 Serine phosphatase RsbU regulator of sigma subunit K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 419.0
SYD3_k127_4302216_11 Protein of unknown function (DUF2851) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000564 404.0
SYD3_k127_4302216_12 AAA domain K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 389.0
SYD3_k127_4302216_13 protein required for cytochrome oxidase assembly K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000375 380.0
SYD3_k127_4302216_14 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004075 361.0
SYD3_k127_4302216_15 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 357.0
SYD3_k127_4302216_16 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 344.0
SYD3_k127_4302216_17 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 325.0
SYD3_k127_4302216_18 Succinylglutamate desuccinylase / Aspartoacylase family K05526 - 3.5.1.96 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007193 306.0
SYD3_k127_4302216_19 Conserved repeat domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001923 301.0
SYD3_k127_4302216_2 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 3.616e-293 909.0
SYD3_k127_4302216_20 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000003506 273.0
SYD3_k127_4302216_21 ECF sigma factor K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002282 257.0
SYD3_k127_4302216_22 Polysaccharide biosynthesis C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006102 270.0
SYD3_k127_4302216_23 Chain length determinant protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002639 263.0
SYD3_k127_4302216_24 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000004311 249.0
SYD3_k127_4302216_25 CBS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000009238 235.0
SYD3_k127_4302216_26 - - - - 0.0000000000000000000000000000000000000000000000000000000000002752 222.0
SYD3_k127_4302216_27 protein secretion - - - 0.000000000000000000000000000000000000000000000000000000002383 228.0
SYD3_k127_4302216_28 TM2 domain - - - 0.00000000000000000000000000000000000000000000000000000001004 207.0
SYD3_k127_4302216_29 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000000000000003882 200.0
SYD3_k127_4302216_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 2.331e-214 687.0
SYD3_k127_4302216_30 D-Tyr-tRNA(Tyr) deacylase K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000003101 196.0
SYD3_k127_4302216_31 rod shape-determining protein MreC K03570 - - 0.000000000000000000000000000000000000000000000000000274 194.0
SYD3_k127_4302216_32 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase - - - 0.00000000000000000000000000000000000000000001021 169.0
SYD3_k127_4302216_33 PFAM Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000002583 159.0
SYD3_k127_4302216_34 MazG nucleotide pyrophosphohydrolase domain - - - 0.0000000000000000000000000000000000000001579 153.0
SYD3_k127_4302216_35 Putative heavy-metal-binding - - - 0.00000000000000000000000000000000000005228 144.0
SYD3_k127_4302216_36 phosphoesterase, PA-phosphatase related - - - 0.0000000000000000000000000000000000005639 148.0
SYD3_k127_4302216_37 Amidohydrolase family - - - 0.0000000000000000000000000000008962 131.0
SYD3_k127_4302216_38 COG2931 RTX toxins and related Ca2 -binding - - - 0.0000000000000000000000000006525 132.0
SYD3_k127_4302216_39 rod shape-determining protein MreD - - - 0.000000000000000000000006246 107.0
SYD3_k127_4302216_4 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 607.0
SYD3_k127_4302216_40 - - - - 0.0000000000000000000002137 103.0
SYD3_k127_4302216_5 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004558 598.0
SYD3_k127_4302216_6 Cell shape determining protein MreB Mrl K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 556.0
SYD3_k127_4302216_7 Aminopeptidase K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 512.0
SYD3_k127_4302216_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007168 456.0
SYD3_k127_4302216_9 Belongs to the PdxA family K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003184 432.0
SYD3_k127_4320876_0 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 0.0 1082.0
SYD3_k127_4320876_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 5.492e-317 980.0
SYD3_k127_4320876_10 PFAM Cys Met metabolism K01739,K01758,K01760 - 2.5.1.48,4.4.1.1,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005116 532.0
SYD3_k127_4320876_11 alanine dehydrogenase K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 529.0
SYD3_k127_4320876_12 Transketolase K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 466.0
SYD3_k127_4320876_13 Transketolase K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009647 428.0
SYD3_k127_4320876_14 phosphohydrolase K06885 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009253 417.0
SYD3_k127_4320876_15 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005781 373.0
SYD3_k127_4320876_16 D-isomer specific 2-hydroxyacid dehydrogenase K00018,K00058 - 1.1.1.29,1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003531 374.0
SYD3_k127_4320876_17 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005289 389.0
SYD3_k127_4320876_18 COGs COG5616 integral membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003665 344.0
SYD3_k127_4320876_19 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009602 333.0
SYD3_k127_4320876_2 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 9.91e-260 818.0
SYD3_k127_4320876_20 SPTR CHU large protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006754 334.0
SYD3_k127_4320876_21 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 297.0
SYD3_k127_4320876_22 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005576 286.0
SYD3_k127_4320876_23 Pectate lyase K01179,K03768,K08738 - 3.2.1.4,5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000001813 277.0
SYD3_k127_4320876_24 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000005905 263.0
SYD3_k127_4320876_25 D,D-heptose 1,7-bisphosphate phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000007042 236.0
SYD3_k127_4320876_26 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000885 229.0
SYD3_k127_4320876_27 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000001544 231.0
SYD3_k127_4320876_28 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) K03545 - - 0.00000000000000000000000000000000000000000000000000002262 205.0
SYD3_k127_4320876_29 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000000000000000434 175.0
SYD3_k127_4320876_3 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 2.38e-257 814.0
SYD3_k127_4320876_30 epimerase K07071 - - 0.000000000000000000000000000000000000000000000829 177.0
SYD3_k127_4320876_31 mannose-6-phosphate isomerase - - - 0.0000000000000000000000000000000000000000001151 163.0
SYD3_k127_4320876_32 - - - - 0.000000000000000000000000000000000000003095 150.0
SYD3_k127_4320876_33 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000000000000000000000006974 149.0
SYD3_k127_4320876_34 PFAM Uncharacterised P-loop hydrolase UPF0079 K06925 - - 0.00000000000000000000000000000004039 130.0
SYD3_k127_4320876_36 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000000000000001771 113.0
SYD3_k127_4320876_39 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000002237 65.0
SYD3_k127_4320876_4 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 1.886e-241 755.0
SYD3_k127_4320876_40 - - - - 0.000000005542 65.0
SYD3_k127_4320876_5 ABC transporter K18890 - - 1.475e-232 733.0
SYD3_k127_4320876_6 Pfam Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 2.028e-218 685.0
SYD3_k127_4320876_7 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 2.071e-196 619.0
SYD3_k127_4320876_8 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004678 603.0
SYD3_k127_4320876_9 VIT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007306 539.0
SYD3_k127_4331852_0 PFAM Formylglycine-generating sulfatase enzyme - - - 2.701e-196 619.0
SYD3_k127_4331852_1 Gliding motility-associated protein GldM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 404.0
SYD3_k127_4331852_2 TIGRFAM gliding motility associated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 325.0
SYD3_k127_4331852_3 of the beta-lactamase superfamily I K06167 - 3.1.4.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004045 290.0
SYD3_k127_4331852_4 Type IX secretion system membrane protein PorP/SprF - - - 0.00000000000000000000000000000000000000000000000000000000000000000002375 244.0
SYD3_k127_4331852_5 TIGRFAM gliding motility-associated protein GldL - - - 0.0000000000000000000000000000000000000000000000000000000008571 209.0
SYD3_k127_4331852_6 - - - - 0.0000000000000000008601 92.0
SYD3_k127_4331852_7 Outer membrane protein beta-barrel domain - - - 0.0000000001396 70.0
SYD3_k127_4331852_8 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000299 48.0
SYD3_k127_4333079_0 Pyrrolo-quinoline quinone K00117 - 1.1.5.2 4.203e-243 763.0
SYD3_k127_4333079_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 501.0
SYD3_k127_4333079_2 glycosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001772 243.0
SYD3_k127_433991_0 Periplasmic copper-binding protein (NosD) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 425.0
SYD3_k127_433991_1 Belongs to the glycosyl hydrolase 28 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 327.0
SYD3_k127_433991_2 Domain of unknown function (DUF4918) - - - 0.00000000000000000000000000000000000000000006528 165.0
SYD3_k127_433991_3 Putative restriction endonuclease - - - 0.00000000000000000000000000000000007052 140.0
SYD3_k127_4404064_0 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway K00351 - 1.6.5.8 9.131e-210 659.0
SYD3_k127_4404064_1 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347 - 1.6.5.8 5.402e-197 621.0
SYD3_k127_4404064_10 - - - - 0.0000002899 57.0
SYD3_k127_4404064_11 DNA-dependent ATPase I and helicase II - - - 0.0004736 42.0
SYD3_k127_4404064_2 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 612.0
SYD3_k127_4404064_3 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00350 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 355.0
SYD3_k127_4404064_4 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00349 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008011 356.0
SYD3_k127_4404064_5 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00348 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 303.0
SYD3_k127_4404064_6 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003525 259.0
SYD3_k127_4404064_7 Nucleotide binding protein, PINc - - - 0.0000000000000000000000000000000000147 139.0
SYD3_k127_4404064_8 nicotinamide mononucleotide transporter K03811 - - 0.0000000000000000000000000000000009851 138.0
SYD3_k127_4404064_9 - - - - 0.000000000005994 69.0
SYD3_k127_4412703_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 3.79e-282 878.0
SYD3_k127_4412703_1 Beta-eliminating lyase - - - 1.871e-238 745.0
SYD3_k127_4412703_10 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 374.0
SYD3_k127_4412703_11 Protein of unknown function, DUF255 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001199 262.0
SYD3_k127_4412703_12 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000003154 226.0
SYD3_k127_4412703_13 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000001506 184.0
SYD3_k127_4412703_14 DinB family - - - 0.0000000000000000000000000000000008711 136.0
SYD3_k127_4412703_15 Fructosamine kinase - - - 0.00000000000000000001361 96.0
SYD3_k127_4412703_2 Tryptophanase K01667 - 4.1.99.1 3.678e-220 698.0
SYD3_k127_4412703_3 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 529.0
SYD3_k127_4412703_4 Belongs to the proline racemase family K12658 - 5.1.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 507.0
SYD3_k127_4412703_5 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 457.0
SYD3_k127_4412703_6 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009776 448.0
SYD3_k127_4412703_7 COG1538 Outer membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005694 445.0
SYD3_k127_4412703_8 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003521 389.0
SYD3_k127_4412703_9 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 379.0
SYD3_k127_4418473_0 Chaperone of endosialidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 440.0
SYD3_k127_4418473_1 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001135 309.0
SYD3_k127_4418473_2 usher protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001669 287.0
SYD3_k127_4418473_3 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001917 271.0
SYD3_k127_4418473_4 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000008787 212.0
SYD3_k127_4418473_5 SprB repeat - - - 0.00000000000000000000000000000000000000000000000000002809 209.0
SYD3_k127_4418473_6 fibronectin type III domain protein - - - 0.00000000000000000000001853 114.0
SYD3_k127_4428463_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 310.0
SYD3_k127_4428463_1 - - - - 0.0000000000000000000000000000000000000000000000000003192 196.0
SYD3_k127_4428463_2 Psort location Cytoplasmic, score 8.96 - - - 0.00000000000000000000000000000000000000000000000009644 188.0
SYD3_k127_4428463_3 Dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000005215 128.0
SYD3_k127_4434946_0 COGs COG2270 Permease of the major facilitator superfamily K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 454.0
SYD3_k127_4434946_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 447.0
SYD3_k127_4434946_2 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 417.0
SYD3_k127_4434946_3 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005399 325.0
SYD3_k127_4434946_4 Belongs to the RimK family K05844 - - 0.00000000000000000007367 91.0
SYD3_k127_4495196_0 SPTR Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 642.0
SYD3_k127_4495196_1 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 373.0
SYD3_k127_4495196_2 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000001124 242.0
SYD3_k127_4495196_3 Dioxygenase K00449 - 1.13.11.3 0.0000000000000000000000000000000000000000000000000000000000000001055 230.0
SYD3_k127_4495196_4 endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000000000000000000000531 222.0
SYD3_k127_4495196_5 Cupin domain - - - 0.000000000000000000000000000000005056 130.0
SYD3_k127_4495196_6 Parallel beta-helix repeats - - - 0.00000000000000000000000001767 128.0
SYD3_k127_4554346_0 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 486.0
SYD3_k127_4554346_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002514 388.0
SYD3_k127_4554346_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009408 383.0
SYD3_k127_4554346_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009764 349.0
SYD3_k127_4554346_5 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000009994 144.0
SYD3_k127_4554346_6 - K21449 - - 0.0000000000000001077 94.0
SYD3_k127_4610828_0 PA14 K08738 - - 0.0 1315.0
SYD3_k127_4610828_1 aconitate hydratase K01681 - 4.2.1.3 0.0 1236.0
SYD3_k127_4610828_10 Belongs to the DEAD box helicase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008012 494.0
SYD3_k127_4610828_11 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008234 469.0
SYD3_k127_4610828_12 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 448.0
SYD3_k127_4610828_13 Integral membrane protein TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004788 446.0
SYD3_k127_4610828_14 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 439.0
SYD3_k127_4610828_15 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006196 409.0
SYD3_k127_4610828_16 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008279 418.0
SYD3_k127_4610828_17 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007882 403.0
SYD3_k127_4610828_18 Transporter associated domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 402.0
SYD3_k127_4610828_19 DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005114 384.0
SYD3_k127_4610828_2 Succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1027.0
SYD3_k127_4610828_20 Succinate dehydrogenase fumarate reductase Fe-S protein subunit K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005397 364.0
SYD3_k127_4610828_21 Permease, YjgP YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009796 357.0
SYD3_k127_4610828_22 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 320.0
SYD3_k127_4610828_23 ubiE/COQ5 methyltransferase family K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 313.0
SYD3_k127_4610828_24 NUDIX domain K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 304.0
SYD3_k127_4610828_25 membrane protein involved in aromatic hydrocarbon degradation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004757 306.0
SYD3_k127_4610828_26 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004305 292.0
SYD3_k127_4610828_27 uracil phosphoribosyltransferase K00761 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002863 274.0
SYD3_k127_4610828_28 O-acyltransferase activity K13018 - 2.3.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000002524 262.0
SYD3_k127_4610828_29 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.00000000000000000000000000000000000000000000000000000000000000000001392 245.0
SYD3_k127_4610828_3 Angiotensin-converting enzyme K01283 - 3.4.15.1 5.646e-269 839.0
SYD3_k127_4610828_30 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000008763 235.0
SYD3_k127_4610828_31 Methyltransferase FkbM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000003322 234.0
SYD3_k127_4610828_32 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000001228 226.0
SYD3_k127_4610828_33 TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 - - 0.0000000000000000000000000000000000000000000000000000000000000002964 227.0
SYD3_k127_4610828_34 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000001883 208.0
SYD3_k127_4610828_35 Single-stranded DNA-binding protein K03111 - - 0.000000000000000000000000000000000000000000000888 169.0
SYD3_k127_4610828_36 TIGRFAM gliding motility-associated lipoprotein GldD - - - 0.000000000000000000000000000000000000000000002383 173.0
SYD3_k127_4610828_37 DinB superfamily - - - 0.000000000000000000000000000000000000000002362 161.0
SYD3_k127_4610828_38 domain protein - - - 0.0000000000000000000000000000000000000002534 173.0
SYD3_k127_4610828_39 transcriptional regulator - - - 0.00000000000000000000000000000000000001866 146.0
SYD3_k127_4610828_4 Domain in cystathionine beta-synthase and other proteins. - - - 3.252e-262 824.0
SYD3_k127_4610828_40 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.00000000000000000000000000000000000006516 147.0
SYD3_k127_4610828_41 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K07443 - 2.1.1.63 0.00000000000000000000000000000000001495 138.0
SYD3_k127_4610828_42 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH - - - 0.00000000000000000000000000000000006222 154.0
SYD3_k127_4610828_43 metallopeptidase activity K09933 - - 0.0000000000000000000000000000000001087 143.0
SYD3_k127_4610828_44 Polyketide cyclase - - - 0.00000000000000000000000000000000181 142.0
SYD3_k127_4610828_45 Domain of unknown function (DUF3127) - - - 0.00000000000000000000000000000005578 129.0
SYD3_k127_4610828_46 - - - - 0.000000000000000000000000006053 113.0
SYD3_k127_4610828_47 energy transducer activity K01181,K03832 - 3.2.1.8 0.000000000000000000000000009614 126.0
SYD3_k127_4610828_48 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000000001142 107.0
SYD3_k127_4610828_49 Motility related/secretion protein - - - 0.0000000000000000001617 91.0
SYD3_k127_4610828_5 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 9.437e-240 750.0
SYD3_k127_4610828_50 - - - - 0.00000000000001184 89.0
SYD3_k127_4610828_51 family transcriptional regulator K13652 - - 0.0000053 58.0
SYD3_k127_4610828_53 PFAM N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.0003259 51.0
SYD3_k127_4610828_54 - - - - 0.0006191 46.0
SYD3_k127_4610828_6 Nicotinate-nucleotide adenylyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 607.0
SYD3_k127_4610828_7 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007877 592.0
SYD3_k127_4610828_8 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 509.0
SYD3_k127_4610828_9 Queuine tRNA-ribosyltransferase K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007427 503.0
SYD3_k127_4623852_0 PFAM glycoside hydrolase family 3 - - - 7.365e-310 977.0
SYD3_k127_4623852_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 594.0
SYD3_k127_4623852_10 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000001704 169.0
SYD3_k127_4623852_11 Glycoprotease family K14742 - - 0.00000000000000000000000000000000000006248 151.0
SYD3_k127_4623852_12 Molecular chaperone DnaK - - - 0.000000000000000000000000000000001925 133.0
SYD3_k127_4623852_13 DNA-binding transcription factor activity K03892 - - 0.0000000000000000000000000000001363 126.0
SYD3_k127_4623852_14 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell - - - 0.000000000000000000000000000001121 139.0
SYD3_k127_4623852_15 - - - - 0.0000000000000000000000000006275 117.0
SYD3_k127_4623852_16 surface antigen - - - 0.000000000000000000004089 109.0
SYD3_k127_4623852_17 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.00000000000000000009928 102.0
SYD3_k127_4623852_18 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13010 - 2.6.1.102 0.0000000000000001141 81.0
SYD3_k127_4623852_19 Belongs to the glycosyl hydrolase 8 (cellulase D) family - - - 0.000006165 53.0
SYD3_k127_4623852_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 557.0
SYD3_k127_4623852_20 heme binding - - - 0.00002259 49.0
SYD3_k127_4623852_3 Belongs to the peptidase S8 family K13276 GO:0005575,GO:0005576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 540.0
SYD3_k127_4623852_4 Belongs to the UPF0176 family K07146 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 436.0
SYD3_k127_4623852_5 Pfam Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 382.0
SYD3_k127_4623852_6 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000001364 265.0
SYD3_k127_4623852_7 Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005255 291.0
SYD3_k127_4623852_8 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001357 253.0
SYD3_k127_4623852_9 Two component transcriptional regulator, LytTR family K02477 - - 0.00000000000000000000000000000000000000000000000000000000001238 216.0
SYD3_k127_4648798_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1435.0
SYD3_k127_4648798_1 SPTR CHU large protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004279 337.0
SYD3_k127_4648798_10 Rhodanese Homology Domain - - - 0.00000000000000000000000002716 110.0
SYD3_k127_4648798_11 - - - - 0.000000000000000000508 94.0
SYD3_k127_4648798_12 PASTA domain containing protein K01921,K08884,K12132 - 2.7.11.1,6.3.2.4 0.00000000000000002972 92.0
SYD3_k127_4648798_13 Outer membrane protein beta-barrel domain - - - 0.0001119 52.0
SYD3_k127_4648798_14 - - - - 0.000191 50.0
SYD3_k127_4648798_2 Deoxycytidine triphosphate deaminase K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 288.0
SYD3_k127_4648798_3 domain, Protein K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004499 287.0
SYD3_k127_4648798_4 translation initiation factor activity - - - 0.0000000000000000000000000000000000000000000000000000000001807 214.0
SYD3_k127_4648798_5 Haem-binding domain - - - 0.0000000000000000000000000000000000000000005455 163.0
SYD3_k127_4648798_6 PFAM Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000005747 166.0
SYD3_k127_4648798_7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000009954 159.0
SYD3_k127_4648798_8 Belongs to the peptidase S8 family K11016 - - 0.00000000000000000000000000000000001009 158.0
SYD3_k127_4648798_9 Belongs to the P-Pant transferase superfamily - - - 0.00000000000000000000000000255 120.0
SYD3_k127_466816_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1037.0
SYD3_k127_466816_1 Transposase IS200 like - - - 0.0000000000000000000000000000000000000000000000000000000000000000004362 235.0
SYD3_k127_4678672_0 Oxidoreductase K00184 - - 7.862e-207 659.0
SYD3_k127_4678672_1 PFAM Cytochrome c, class I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006651 536.0
SYD3_k127_4678672_10 - - - - 0.00005511 53.0
SYD3_k127_4678672_2 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009203 537.0
SYD3_k127_4678672_3 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 450.0
SYD3_k127_4678672_4 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 433.0
SYD3_k127_4678672_5 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004233 302.0
SYD3_k127_4678672_6 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000009528 150.0
SYD3_k127_4678672_7 OsmC-like protein K07397 - - 0.0000000000000000000000000000001067 128.0
SYD3_k127_4678672_8 Preprotein translocase SecG subunit K03075 - - 0.000000000000000000000000002836 112.0
SYD3_k127_4678672_9 membrane - - - 0.000000000000000000001389 99.0
SYD3_k127_485880_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0 1038.0
SYD3_k127_485880_1 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000907 280.0
SYD3_k127_485880_2 Biopolymer transport protein ExbD TolR K03559 - - 0.0000000000000000000000000000000000003705 143.0
SYD3_k127_485880_3 Biopolymer transport protein ExbD/TolR K03559 - - 0.0000000000000000000000000006275 117.0
SYD3_k127_485880_4 TonB family domain protein - - - 0.0000000000003078 74.0
SYD3_k127_4897767_0 C-terminal domain of CHU protein family - - - 3.756e-215 744.0
SYD3_k127_4897767_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 528.0
SYD3_k127_4897767_2 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000008677 253.0
SYD3_k127_4897767_3 Outer membrane protein Omp28 - - - 0.000000000000000000000000000000000000000000000000000002416 200.0
SYD3_k127_4897767_4 Thioredoxin - - - 0.000000000000000000000000000000000000000000000001431 179.0
SYD3_k127_4897767_5 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000219 139.0
SYD3_k127_4897767_6 - - - - 0.0000000000000000000001925 102.0
SYD3_k127_4906133_0 Chaperone of endosialidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000758 356.0
SYD3_k127_4906133_1 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000005724 256.0
SYD3_k127_4906133_2 Domain of unknown function (DUF4294) - - - 0.00000000000000000000000001815 114.0
SYD3_k127_4906133_3 Domain of unknown function (DUF892) - - - 0.000000003913 58.0
SYD3_k127_4906133_4 Hep Hag repeat protein - - - 0.000000004647 69.0
SYD3_k127_4943329_0 Periplasmic component of the Tol biopolymer transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003951 604.0
SYD3_k127_4943329_1 Serine aminopeptidase, S33 K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004595 474.0
SYD3_k127_4943329_10 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000009016 269.0
SYD3_k127_4943329_11 TraB family K09973 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000127 254.0
SYD3_k127_4943329_12 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000009411 240.0
SYD3_k127_4943329_13 Protein of unknown function (DUF2652) - - - 0.00000000000000000000000000000000000000000000000000000000000000009843 237.0
SYD3_k127_4943329_14 TIGRFAM glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000003487 212.0
SYD3_k127_4943329_16 signal transduction protein with a C-terminal ATPase domain - - - 0.00000000000000000000000000000000000000000000000000004522 209.0
SYD3_k127_4943329_17 Amino-transferase class IV K02619 - 4.1.3.38 0.0000000000000000000000000000000000000000000000000001773 192.0
SYD3_k127_4943329_18 - - - - 0.0000000000000000000000000000000000000001631 159.0
SYD3_k127_4943329_19 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000001347 149.0
SYD3_k127_4943329_2 chorismate binding enzyme K01665 - 2.6.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003071 392.0
SYD3_k127_4943329_20 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000004204 159.0
SYD3_k127_4943329_21 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000001411 147.0
SYD3_k127_4943329_22 - - - - 0.000000000000000000001162 102.0
SYD3_k127_4943329_23 Histidine kinase - - - 0.00000000000000000002057 104.0
SYD3_k127_4943329_24 Sulfotransferase family - - - 0.0000002008 63.0
SYD3_k127_4943329_25 Outer membrane protein beta-barrel domain - - - 0.0003933 50.0
SYD3_k127_4943329_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 389.0
SYD3_k127_4943329_4 PFAM SMP-30 Gluconolaconase K01053 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 370.0
SYD3_k127_4943329_5 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 356.0
SYD3_k127_4943329_6 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006743 332.0
SYD3_k127_4943329_7 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 302.0
SYD3_k127_4943329_8 penicillin-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 295.0
SYD3_k127_4943329_9 Protein of unknown function (DUF3089) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001361 287.0
SYD3_k127_4975699_0 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000695 509.0
SYD3_k127_4975699_1 PUA domain containing protein K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005429 407.0
SYD3_k127_4975699_2 PFAM aldo keto reductase K19265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008345 317.0
SYD3_k127_4975699_3 AAA domain, putative AbiEii toxin, Type IV TA system K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006037 244.0
SYD3_k127_5013582_0 PFAM ASPIC and UnbV - - - 2.46e-285 912.0
SYD3_k127_5013582_1 PKD domain - - - 5.963e-201 672.0
SYD3_k127_5013582_10 PFAM oxidoreductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000006906 247.0
SYD3_k127_5013582_11 Carbohydrate family 9 binding domain-like - - - 0.0000000000000000000000000000000000000000000000000000000000000001736 226.0
SYD3_k127_5013582_12 - - - - 0.00000000000000000000000000000000000000000000000000000000004499 214.0
SYD3_k127_5013582_13 cellulase activity - - - 0.000000000000000000000000000000000000000000000000000000005666 231.0
SYD3_k127_5013582_14 metal-dependent protease of the PAD1 JAB1 superfamily K21140 - 3.13.1.6 0.00000000000000000000000000004068 121.0
SYD3_k127_5013582_15 ThiS family K03636 - - 0.00000000000000000001059 95.0
SYD3_k127_5013582_16 Putative auto-transporter adhesin, head GIN domain - - - 0.0000000000000000426 90.0
SYD3_k127_5013582_2 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009531 587.0
SYD3_k127_5013582_3 MoeZ MoeB domain K21029,K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008189 578.0
SYD3_k127_5013582_4 SPTR CHU large protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 547.0
SYD3_k127_5013582_5 TIGRFAM cysteine desulfurase family protein, VC1184 subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 479.0
SYD3_k127_5013582_6 Phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 415.0
SYD3_k127_5013582_7 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003994 353.0
SYD3_k127_5013582_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 346.0
SYD3_k127_5013582_9 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009313 319.0
SYD3_k127_5026003_0 Alpha-2-Macroglobulin K06894 - - 0.0 1350.0
SYD3_k127_5026003_1 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.0 1034.0
SYD3_k127_5026003_10 Quinol cytochrome c oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006675 254.0
SYD3_k127_5026003_11 cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000001635 213.0
SYD3_k127_5026003_12 Protein of unknown function (DUF420) K08976 - - 0.0000000000000000000000000000000000000000000000000008837 188.0
SYD3_k127_5026003_15 - - - - 0.0000000000000000000005179 100.0
SYD3_k127_5026003_2 PFAM Polysulphide reductase, NrfD K00185 - - 2.763e-255 792.0
SYD3_k127_5026003_3 Penicillin-binding Protein K05367 - 2.4.1.129 5.843e-246 782.0
SYD3_k127_5026003_4 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 1.575e-203 644.0
SYD3_k127_5026003_5 Oxidoreductase K00184 - - 2.315e-197 626.0
SYD3_k127_5026003_6 Quinol cytochrome c oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003395 523.0
SYD3_k127_5026003_7 oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 406.0
SYD3_k127_5026003_8 cytochrome C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001038 273.0
SYD3_k127_5026003_9 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000006651 268.0
SYD3_k127_5060378_0 nitric oxide reductase K04561 - 1.7.2.5 0.0 1189.0
SYD3_k127_5060378_1 cell adhesion involved in biofilm formation - - - 5.364e-253 854.0
SYD3_k127_5060378_10 cellulose binding - - - 0.000000000000000006381 94.0
SYD3_k127_5060378_11 domain, Protein K20276 - - 0.00000000001901 79.0
SYD3_k127_5060378_2 PFAM Phosphatidic acid phosphatase type 2 haloperoxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007891 435.0
SYD3_k127_5060378_3 Cation efflux family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 301.0
SYD3_k127_5060378_4 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K00574,K07755 - 2.1.1.137,2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 302.0
SYD3_k127_5060378_5 Rossmann-like domain K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000000000000000000007215 239.0
SYD3_k127_5060378_6 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000478 197.0
SYD3_k127_5060378_7 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000003042 179.0
SYD3_k127_5060378_8 transcriptional regulator - - - 0.0000000000000000000000000000000000000007671 154.0
SYD3_k127_5060378_9 Protein of unknown function (DUF2905) - - - 0.00000000000000000000000003067 111.0
SYD3_k127_5066381_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003887 556.0
SYD3_k127_5066381_1 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000379 520.0
SYD3_k127_5066381_10 Cyclic nucleotide-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001199 232.0
SYD3_k127_5066381_11 PFAM Cache K08738 - - 0.0000000000000000000000000000000000000000000000000000000000000002732 245.0
SYD3_k127_5066381_12 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000000000000000000000000000000000112 210.0
SYD3_k127_5066381_13 SPTR Cupin 2 conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000000000701 199.0
SYD3_k127_5066381_14 - - - - 0.00000000000000000000000000000000000000000000000002548 182.0
SYD3_k127_5066381_15 - - - - 0.000000000000000000000000000000000000000000000003516 183.0
SYD3_k127_5066381_16 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000000000004398 168.0
SYD3_k127_5066381_17 Single Cache domain 2 K07647 - 2.7.13.3 0.00000000000000000000000000000000000000000001482 184.0
SYD3_k127_5066381_18 - - - - 0.0000000000000000000000000000000000000006735 156.0
SYD3_k127_5066381_2 Participates in initiation and elongation during chromosome replication - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 457.0
SYD3_k127_5066381_20 - - - - 0.0000000000000000000000001686 110.0
SYD3_k127_5066381_21 Cupin - - - 0.00000000000000000001171 108.0
SYD3_k127_5066381_22 - - - - 0.00000000000000000004094 94.0
SYD3_k127_5066381_23 Hep Hag repeat protein - - - 0.0000000001555 74.0
SYD3_k127_5066381_24 SPTR CHU large protein - - - 0.000000037 61.0
SYD3_k127_5066381_3 beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 431.0
SYD3_k127_5066381_4 Putative esterase K07017 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003393 394.0
SYD3_k127_5066381_5 FAD-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007276 315.0
SYD3_k127_5066381_6 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004632 312.0
SYD3_k127_5066381_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001713 265.0
SYD3_k127_5066381_8 SPTR Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002172 264.0
SYD3_k127_5066381_9 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001538 269.0
SYD3_k127_5105136_0 GMC oxidoreductase - - - 2.714e-240 755.0
SYD3_k127_5105136_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 4.958e-227 711.0
SYD3_k127_5105136_10 Fe-S metabolism K02426 - - 0.000000000000000000000000000000000000000000000000000003349 195.0
SYD3_k127_5105136_11 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000005357 189.0
SYD3_k127_5105136_12 transcriptional regulator - - - 0.00000000000000000000000000000000000000000018 163.0
SYD3_k127_5105136_13 FeS assembly SUF system protein - - - 0.0000000000000000000000000000000000000136 146.0
SYD3_k127_5105136_14 Lipopolysaccharide-assembly - - - 0.00000000000000000000000000000001198 134.0
SYD3_k127_5105136_15 Cytochrome c, class I K08738 - - 0.00000000000000000000000000915 113.0
SYD3_k127_5105136_16 PFAM PspC domain - - - 0.000000000000000000007266 93.0
SYD3_k127_5105136_17 - - - - 0.00000000000000000001828 94.0
SYD3_k127_5105136_19 Gluconate 2-dehydrogenase subunit 3 - - - 0.0000000000000005489 85.0
SYD3_k127_5105136_2 PFAM Dynamin family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 581.0
SYD3_k127_5105136_21 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000003789 51.0
SYD3_k127_5105136_3 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005629 547.0
SYD3_k127_5105136_4 ATPase (AAA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002973 500.0
SYD3_k127_5105136_5 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003657 462.0
SYD3_k127_5105136_6 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 340.0
SYD3_k127_5105136_7 PFAM Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006858 263.0
SYD3_k127_5105136_8 PFAM Shikimate dehydrogenase substrate binding K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000009591 261.0
SYD3_k127_5105136_9 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005797 246.0
SYD3_k127_5197293_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0070011,GO:0070012,GO:0071704,GO:0140096,GO:1901564 3.4.21.83 6.556e-290 908.0
SYD3_k127_5197293_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 5.112e-199 646.0
SYD3_k127_5197293_10 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 308.0
SYD3_k127_5197293_11 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002898 280.0
SYD3_k127_5197293_12 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000007489 232.0
SYD3_k127_5197293_13 IMP dehydrogenase activity K04767,K07182 - - 0.00000000000000000000000000000000000000000007966 164.0
SYD3_k127_5197293_14 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000002459 135.0
SYD3_k127_5197293_15 Peptidyl-prolyl cis-trans isomerase K01802,K03767,K03772 - 5.2.1.8 0.000000000000000000000000000002554 132.0
SYD3_k127_5197293_16 Cytochrome c - - - 0.00000000000000000000000000173 116.0
SYD3_k127_5197293_17 Putative prokaryotic signal transducing protein - - - 0.00000000000000000005167 102.0
SYD3_k127_5197293_18 - - - - 0.000000000000000001413 90.0
SYD3_k127_5197293_19 Bax inhibitor 1 like - - - 0.0000000001177 62.0
SYD3_k127_5197293_2 cellulase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 594.0
SYD3_k127_5197293_20 - - - - 0.000000244 61.0
SYD3_k127_5197293_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004861 507.0
SYD3_k127_5197293_4 MatE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 465.0
SYD3_k127_5197293_5 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005943 401.0
SYD3_k127_5197293_6 COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000342 380.0
SYD3_k127_5197293_7 phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004733 374.0
SYD3_k127_5197293_8 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 362.0
SYD3_k127_5197293_9 Hexapeptide repeat of succinyl-transferase K02617,K08279 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006289 311.0
SYD3_k127_5297854_0 TonB-dependent Receptor Plug - - - 1.505e-239 765.0
SYD3_k127_5297854_1 Carbohydrate family 9 binding domain-like - - - 7.744e-230 737.0
SYD3_k127_5297854_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005377 450.0
SYD3_k127_5297854_3 ribonucleoside-diphosphate reductase activity K00525,K21636 - 1.1.98.6,1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 462.0
SYD3_k127_5297854_4 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 302.0
SYD3_k127_5297854_5 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000009639 110.0
SYD3_k127_5297854_6 TIGRFAM type I restriction system adenine methylase (hsdM) K03427 - 2.1.1.72 0.000000000004695 67.0
SYD3_k127_5297854_7 - - - - 0.0000000002838 66.0
SYD3_k127_5297854_8 sequence-specific DNA binding K03427 - 2.1.1.72 0.0000000203 56.0
SYD3_k127_5423657_0 PFAM Peptidase family M20 M25 M40 - - - 1.069e-217 683.0
SYD3_k127_5423657_1 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 334.0
SYD3_k127_5423657_2 PFAM SNARE associated Golgi protein K03975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000876 272.0
SYD3_k127_5423657_3 Phosphoesterase PA-phosphatase related K19302 - 3.6.1.27 0.00000000000000000000000000000000000002256 151.0
SYD3_k127_5423657_4 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 0.0000000000000000000000000000000000004252 143.0
SYD3_k127_5478964_0 CarboxypepD_reg-like domain - - - 0.0 1041.0
SYD3_k127_5478964_1 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.0 1011.0
SYD3_k127_5478964_2 acyl-CoA dehydrogenase - - - 5.507e-233 736.0
SYD3_k127_5478964_3 Belongs to the aldehyde dehydrogenase family K00128,K00154 - 1.2.1.3,1.2.1.68 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 478.0
SYD3_k127_5478964_4 SusD family K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006484 417.0
SYD3_k127_5478964_5 - - - - 0.000000000000000000000000000000005964 129.0
SYD3_k127_5494132_0 ABC transporter K15738 - - 3.827e-293 906.0
SYD3_k127_5494132_1 Domain of unknown function (DUF4143) K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 414.0
SYD3_k127_5494132_2 Male sterility protein K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 359.0
SYD3_k127_5494132_3 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003885 277.0
SYD3_k127_5494132_4 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000008044 52.0
SYD3_k127_5506704_0 C-terminal domain of CHU protein family - - - 8.351e-265 846.0
SYD3_k127_5506704_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 1.779e-199 629.0
SYD3_k127_5506704_2 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007354 357.0
SYD3_k127_5506704_3 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000000000000000001063 267.0
SYD3_k127_5506704_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002586 254.0
SYD3_k127_5506704_5 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000008971 240.0
SYD3_k127_5506704_6 ATPase kinase involved in NAD metabolism - - - 0.00000000000000000000000000000000004067 141.0
SYD3_k127_5506704_7 PFAM TonB-dependent Receptor Plug Domain K02014 - - 0.000000000000000000000006132 108.0
SYD3_k127_5506704_8 Methyltransferase domain - - - 0.0000000000001773 74.0
SYD3_k127_5520184_0 DNA polymerase X family - - - 1.552e-212 674.0
SYD3_k127_5520184_1 amino acid activation for nonribosomal peptide biosynthetic process - - - 5.866e-197 662.0
SYD3_k127_5520184_10 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000002204 145.0
SYD3_k127_5520184_11 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell - - - 0.000000000000000000000000001409 127.0
SYD3_k127_5520184_2 Erythromycin esterase K06880 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005764 584.0
SYD3_k127_5520184_3 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 567.0
SYD3_k127_5520184_4 Voltage gated chloride channel K03281 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 524.0
SYD3_k127_5520184_5 Hep Hag repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 421.0
SYD3_k127_5520184_6 pyrroloquinoline quinone binding K01206,K01218 - 3.2.1.51,3.2.1.78 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 407.0
SYD3_k127_5520184_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005949 288.0
SYD3_k127_5520184_8 Dienelactone hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000004519 241.0
SYD3_k127_5520184_9 Phosphoribosyl transferase domain K07100 - - 0.0000000000000000000000000000000000000000000000000000000000001397 220.0
SYD3_k127_5557792_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004364 269.0
SYD3_k127_5557792_1 Chaperone of endosialidase - - - 0.0000000000000000000000000000000000001475 164.0
SYD3_k127_5557792_2 Pkd domain containing protein - - - 0.000000000000000000000000002689 128.0
SYD3_k127_5557792_3 Two component transcriptional regulator, LytTR family K02477 - - 0.0000000000000003113 83.0
SYD3_k127_5557792_4 Tetratricopeptide repeat - - - 0.00002401 57.0
SYD3_k127_5630071_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005603 304.0
SYD3_k127_5630071_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001472 266.0
SYD3_k127_5635208_0 TonB-dependent receptor plug - - - 0.0 1043.0
SYD3_k127_5635208_1 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 8.058e-314 977.0
SYD3_k127_5635208_10 Sugar nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009222 449.0
SYD3_k127_5635208_11 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002787 387.0
SYD3_k127_5635208_12 Bacterial phospho-glucose isomerase C-terminal SIS domain K15916 - 5.3.1.8,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 367.0
SYD3_k127_5635208_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005945 313.0
SYD3_k127_5635208_14 Domain of unknown function (DUF4249) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 292.0
SYD3_k127_5635208_15 PFAM Transglycosylase SLT domain K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001553 290.0
SYD3_k127_5635208_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000003724 253.0
SYD3_k127_5635208_17 Redoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002683 250.0
SYD3_k127_5635208_18 Spermidine synthase K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000002316 219.0
SYD3_k127_5635208_19 TIGRFAM Methylglyoxal synthase K01734 - 4.2.3.3 0.000000000000000000000000000000000000000000000000000000000238 207.0
SYD3_k127_5635208_2 NADH ubiquinone oxidoreductase subunit 5 (Chain L) multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 6.081e-225 713.0
SYD3_k127_5635208_20 SPTR CHU large protein - - - 0.000000000000000000000000000000000000000000000000000000001375 228.0
SYD3_k127_5635208_21 NADH-quinone oxidoreductase subunit E K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000005097 203.0
SYD3_k127_5635208_22 domain protein K01179,K01997,K04618 - 1.1.3.9,3.2.1.4 0.00000000000000000000000000000000000000000000000000000008794 227.0
SYD3_k127_5635208_23 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000006699 195.0
SYD3_k127_5635208_24 Thioredoxin - - - 0.00000000000000000000000000000000000000000000001727 175.0
SYD3_k127_5635208_25 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000002391 165.0
SYD3_k127_5635208_26 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000000000000000000000009692 162.0
SYD3_k127_5635208_27 Ribosomal protein L31 K02909 - - 0.00000000000000000000000000000000000000267 148.0
SYD3_k127_5635208_28 Redoxin - - - 0.000000000000000000000000000000000000004316 169.0
SYD3_k127_5635208_29 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000000000001621 146.0
SYD3_k127_5635208_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335,K18331 - 1.12.1.3,1.6.5.3 1.567e-224 703.0
SYD3_k127_5635208_30 PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000000000000000000000003746 150.0
SYD3_k127_5635208_31 Hsp20/alpha crystallin family K13993 - - 0.00000000000000000000000000000000001441 141.0
SYD3_k127_5635208_32 BlaR1 peptidase M56 - - - 0.00000000000000000000000000000000006257 144.0
SYD3_k127_5635208_33 Domain of unknown function (DUF4920) - - - 0.00000000000000000000000000000000736 138.0
SYD3_k127_5635208_34 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000000001474 119.0
SYD3_k127_5635208_36 Hsp20/alpha crystallin family K13993 - - 0.00000000000000000004418 95.0
SYD3_k127_5635208_38 PFAM Pentapeptide repeats (8 copies) - - - 0.00000000452 72.0
SYD3_k127_5635208_39 gliding motility-associated C-terminal domain - - - 0.000000007824 71.0
SYD3_k127_5635208_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 5.136e-201 632.0
SYD3_k127_5635208_5 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000547 533.0
SYD3_k127_5635208_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000551 489.0
SYD3_k127_5635208_7 PFAM NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 485.0
SYD3_k127_5635208_8 metallopeptidase activity K12287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 543.0
SYD3_k127_5635208_9 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 463.0
SYD3_k127_5661192_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1040.0
SYD3_k127_5661192_1 Phosphotransferase enzyme family - - - 7.222e-266 852.0
SYD3_k127_5661192_2 Phenylacetic acid catabolic protein K02609 - 1.14.13.149 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000385 555.0
SYD3_k127_5661192_3 Peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008052 455.0
SYD3_k127_5661192_4 succinate dehydrogenase or fumarate reductase, flavoprotein K00239 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004394 422.0
SYD3_k127_5661192_5 diphosphomevalonate decarboxylase K01597 - 4.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 334.0
SYD3_k127_5661192_6 RNA recognition motif - - - 0.0000000000000000000265 93.0
SYD3_k127_5667769_0 FG-GAP repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002714 301.0
SYD3_k127_5667769_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004324 280.0
SYD3_k127_5667769_10 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell - - - 0.00000000001201 74.0
SYD3_k127_5667769_11 - - - - 0.00000000003717 76.0
SYD3_k127_5667769_12 - - - - 0.0004153 49.0
SYD3_k127_5667769_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004998 271.0
SYD3_k127_5667769_3 - - - - 0.00000000000000000000000000000000001811 144.0
SYD3_k127_5667769_4 YjbR - - - 0.000000000000000000000001506 105.0
SYD3_k127_5667769_5 surface antigen - - - 0.00000000000000000009833 105.0
SYD3_k127_5667769_6 Two component transcriptional regulator, LytTR family K02477 - - 0.000000000000000000117 93.0
SYD3_k127_5667769_7 Two component transcriptional regulator, LytTR family K02477 - - 0.000000000000000001065 90.0
SYD3_k127_5667769_8 to other proteins from the same organism - - - 0.000000000000002098 90.0
SYD3_k127_5667769_9 tail collar domain protein - - - 0.00000000000297 79.0
SYD3_k127_5683584_0 membrane protein involved in D-alanine export - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 610.0
SYD3_k127_5683584_1 SPTR Phosphoesterase, PA-phosphatase related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000732 538.0
SYD3_k127_5683584_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 293.0
SYD3_k127_5683584_3 oligosaccharyl transferase activity - - - 0.0000003298 60.0
SYD3_k127_5718266_0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01921 - 6.3.2.4 8.97e-222 697.0
SYD3_k127_5718266_1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 457.0
SYD3_k127_5718266_2 HYR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 441.0
SYD3_k127_5718266_3 Protein conserved in bacteria K07654 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000001795 294.0
SYD3_k127_5718266_4 SET domain - - - 0.0000000000000000000000000000000000000000000000001269 181.0
SYD3_k127_5718266_5 Pregnancy-associated plasma protein-A - - - 0.000000006343 71.0
SYD3_k127_5719561_0 BNR Asp-box repeat - - - 1.089e-249 796.0
SYD3_k127_5719561_1 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006077 563.0
SYD3_k127_5719561_10 Lipid A 3-O-deacylase (PagL) - - - 0.0000001878 60.0
SYD3_k127_5719561_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004708 479.0
SYD3_k127_5719561_3 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 306.0
SYD3_k127_5719561_4 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000008184 234.0
SYD3_k127_5719561_5 Type IX secretion system membrane protein PorP/SprF - - - 0.0000000000000000000000000000000000000000000000000000000000001161 225.0
SYD3_k127_5719561_6 translation initiation factor activity K06996 - - 0.00000000000000000000000000000001775 130.0
SYD3_k127_5719561_7 methyltransferase activity - - - 0.00000000000000000000000000000002757 132.0
SYD3_k127_5719561_8 - - - - 0.00000000004043 68.0
SYD3_k127_5719561_9 chlorophyll binding - - - 0.00000000005132 72.0
SYD3_k127_5810094_0 domain, Protein - - - 0.00000000000000000000000000009594 118.0
SYD3_k127_5810094_1 domain, Protein K20276 - - 0.000000000000000000003057 110.0
SYD3_k127_5810094_2 HYR domain - - - 0.000000005244 70.0
SYD3_k127_5810094_3 Subtilase family - - - 0.00000004765 67.0
SYD3_k127_5811006_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 4.495e-223 709.0
SYD3_k127_5811006_1 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 3.913e-202 646.0
SYD3_k127_5811006_2 Radical SAM K11784 - 1.21.98.1 7.536e-199 626.0
SYD3_k127_5811006_3 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003849 452.0
SYD3_k127_5811006_4 Metal cation transporter, ZIP family K07238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 397.0
SYD3_k127_5811006_5 PFAM pfkB family carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008191 329.0
SYD3_k127_5811006_6 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000001011 243.0
SYD3_k127_5811006_7 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000003238 221.0
SYD3_k127_5811006_8 Uncharacterized conserved protein (DUF2267) - - - 0.0000000000000000000000000000000000000007548 152.0
SYD3_k127_5811006_9 metallopeptidase activity - - - 0.00000001745 68.0
SYD3_k127_5841092_0 amine dehydrogenase activity - - - 5.138e-219 714.0
SYD3_k127_5841092_1 Peptidase dimerisation domain K12941 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006216 569.0
SYD3_k127_5841092_2 peptidase activity, acting on L-amino acid peptides K05996 - 3.4.17.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 567.0
SYD3_k127_5841092_3 alginic acid biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000387 465.0
SYD3_k127_5841092_4 PFAM Aminotransferase class I and II K14287 - 2.6.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 442.0
SYD3_k127_5841092_5 Protease prsW family - - - 0.000000000000000000000000000000000000000000000000000001403 199.0
SYD3_k127_5841092_6 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000001754 181.0
SYD3_k127_5841092_7 PFAM Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000001068 124.0
SYD3_k127_5841092_8 phosphohydrolase - - - 0.0000000000000000471 88.0
SYD3_k127_5841092_9 helix_turn_helix, arabinose operon control protein - - - 0.0004742 44.0
SYD3_k127_5873609_0 BNR Asp-box repeat - - - 0.0 1408.0
SYD3_k127_5873609_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1049.0
SYD3_k127_5873609_10 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006564 484.0
SYD3_k127_5873609_11 nucleoside transporter K03317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009524 490.0
SYD3_k127_5873609_12 Dahp synthetase i kdsa K04516 - 5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008491 444.0
SYD3_k127_5873609_13 Phage shock protein A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 430.0
SYD3_k127_5873609_14 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003167 383.0
SYD3_k127_5873609_15 membrane protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 369.0
SYD3_k127_5873609_16 Uncharacterized protein conserved in bacteria (DUF2130) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 376.0
SYD3_k127_5873609_17 Ion transport protein K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003266 316.0
SYD3_k127_5873609_18 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005578 291.0
SYD3_k127_5873609_19 Belongs to the UPF0246 family K09861 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0033194,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:1901700 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001486 273.0
SYD3_k127_5873609_2 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K00615 - 2.2.1.1 3.868e-304 951.0
SYD3_k127_5873609_20 Protein of unknown function (DUF4197) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002024 253.0
SYD3_k127_5873609_21 dehydrogenase complex catalyzes the overall conversion of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001316 250.0
SYD3_k127_5873609_22 WG containing repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001655 253.0
SYD3_k127_5873609_23 uridine kinase K00876 - 2.7.1.48 0.000000000000000000000000000000000000000000000000000000000000003713 222.0
SYD3_k127_5873609_24 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000004438 222.0
SYD3_k127_5873609_25 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.00000000000000000000000000000000000000000000000000000001634 202.0
SYD3_k127_5873609_26 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000000000000000000007331 198.0
SYD3_k127_5873609_27 thiolester hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000236 196.0
SYD3_k127_5873609_28 Uncharacterized protein conserved in bacteria (DUF2255) - - - 0.000000000000000000000000000000000000000000008879 166.0
SYD3_k127_5873609_29 DinB family - - - 0.00000000000000000000000000000000000000000003139 166.0
SYD3_k127_5873609_3 Amidohydrolase family - - - 8.107e-287 887.0
SYD3_k127_5873609_30 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000003956 155.0
SYD3_k127_5873609_31 - - - - 0.0000000000000000000000000000000000476 140.0
SYD3_k127_5873609_32 Protein of unknown function (DUF1573) - - - 0.000000000000000000000000000000009924 133.0
SYD3_k127_5873609_33 START domain - - - 0.000000000000000000000000000003859 127.0
SYD3_k127_5873609_34 Fe2 -dicitrate sensor, membrane component - - - 0.00000000000000000000000118 115.0
SYD3_k127_5873609_35 - - - - 0.0000000000001291 73.0
SYD3_k127_5873609_37 - - - - 0.0006968 44.0
SYD3_k127_5873609_4 Metallo-peptidase family M12 - - - 2.352e-236 760.0
SYD3_k127_5873609_5 phosphorylase K00688,K00691,K16153 - 2.4.1.1,2.4.1.11,2.4.1.8 4.238e-213 676.0
SYD3_k127_5873609_6 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005043 604.0
SYD3_k127_5873609_7 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006119 578.0
SYD3_k127_5873609_8 Belongs to the glycosyl hydrolase 30 family K01201 - 3.2.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000625 552.0
SYD3_k127_5873609_9 Pyridoxal-dependent decarboxylase conserved domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 529.0
SYD3_k127_5881342_0 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002881 259.0
SYD3_k127_5881342_1 light absorption K07255,K21700 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007469 241.0
SYD3_k127_5881342_3 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000001956 149.0
SYD3_k127_5881342_4 energy transducer activity K03832 - - 0.000000000000149 76.0
SYD3_k127_5881342_5 ASPIC and UnbV - - - 0.0001122 54.0
SYD3_k127_5967570_0 Domain of unknown function (DUF4139) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 462.0
SYD3_k127_5967570_1 M6 family metalloprotease domain protein - - - 0.0000000000000000000000000000000000000000004096 176.0
SYD3_k127_5967570_2 heme binding - - - 0.00000000000000000000000000000008479 136.0
SYD3_k127_5967570_3 Regulator of chromosome condensation (RCC1) repeat - - - 0.0001058 55.0
SYD3_k127_5977282_0 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000002909 181.0
SYD3_k127_5977282_1 metallopeptidase activity - - - 0.000000000002212 71.0
SYD3_k127_5977282_2 response regulator K14979 - - 0.00000000004947 66.0
SYD3_k127_5996704_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 579.0
SYD3_k127_5996704_1 PFAM glycosyl hydrolase 53 domain protein K01224 - 3.2.1.89 0.000000000000000000000000000000000000002698 154.0
SYD3_k127_600307_0 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 2.338e-261 812.0
SYD3_k127_600307_1 COG1132 ABC-type multidrug transport system, ATPase and permease components K06147 - - 2.682e-207 653.0
SYD3_k127_600307_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007434 497.0
SYD3_k127_600307_3 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 341.0
SYD3_k127_600307_4 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006597 331.0
SYD3_k127_600307_5 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002099 253.0
SYD3_k127_600307_6 Transglycosylase associated protein - - - 0.000000000000000007554 85.0
SYD3_k127_600307_8 - - - - 0.0000000002154 70.0
SYD3_k127_6010451_0 PFAM TonB-dependent Receptor Plug - - - 1.464e-209 676.0
SYD3_k127_6010451_1 PFAM Aminotransferase class I and II K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000001665 265.0
SYD3_k127_6010451_2 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001997 265.0
SYD3_k127_6010451_3 cobalamin-transporting ATPase activity K02014,K16092 - - 0.000000000000000000000000000000000000000000000000000000000001226 233.0
SYD3_k127_6010451_4 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000000000000000000000000000000000000000000000003026 196.0
SYD3_k127_6010451_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000003951 138.0
SYD3_k127_6010451_6 Domain of unknown function (DUF4974) - - - 0.000000000000000000000000000000004001 141.0
SYD3_k127_6010451_7 transposase activity - - - 0.000003172 49.0
SYD3_k127_6045961_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002811 579.0
SYD3_k127_6045961_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 560.0
SYD3_k127_6045961_10 MraZ protein, putative antitoxin-like K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.00000000000000000000000000000000000000000004301 166.0
SYD3_k127_6045961_11 Cell division protein K03589 - - 0.000000000000000000000000000000000000000006282 163.0
SYD3_k127_6045961_12 - - - - 0.000000000000937 73.0
SYD3_k127_6045961_13 - - - - 0.0000001135 56.0
SYD3_k127_6045961_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 556.0
SYD3_k127_6045961_3 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006396 566.0
SYD3_k127_6045961_4 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 518.0
SYD3_k127_6045961_5 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008608 448.0
SYD3_k127_6045961_6 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 434.0
SYD3_k127_6045961_7 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 417.0
SYD3_k127_6045961_8 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003306 402.0
SYD3_k127_6045961_9 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002295 280.0
SYD3_k127_6053506_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495 587.0
SYD3_k127_6053506_1 lyase activity K11645 GO:0003674,GO:0003824,GO:0004332,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016829,GO:0016830,GO:0016832,GO:0042802,GO:0044424,GO:0044444,GO:0044464 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 559.0
SYD3_k127_6053506_2 Pfam:Pyridox_oxidase K01768 - 4.6.1.1 0.000000000000000000000000000001699 124.0
SYD3_k127_6053506_3 pyridoxamine 5-phosphate - - - 0.00001129 53.0
SYD3_k127_6056023_0 TIGRFAM N-terminal double-transmembrane domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002755 616.0
SYD3_k127_6056023_1 - - - - 0.00000000000000000000000000000000000000000000000002349 189.0
SYD3_k127_6056023_2 Sulfotransferase family - - - 0.00000000009472 73.0
SYD3_k127_6097772_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - 3.152e-270 841.0
SYD3_k127_6097772_1 Threonine aldolase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002368 445.0
SYD3_k127_6097772_10 PFAM Uncharacterised ACR, COG1259 K08999 - - 0.000000000000000000000000000000000000000000000000000000000000000000007694 239.0
SYD3_k127_6097772_11 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000004851 240.0
SYD3_k127_6097772_12 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000001315 161.0
SYD3_k127_6097772_13 Phosphohydrolase - - - 0.0000000000000000000000000002375 121.0
SYD3_k127_6097772_14 Tetratricopeptide repeat - - - 0.0000000000000000001077 93.0
SYD3_k127_6097772_15 Glycosyl transferase family 2 - - - 0.0000000000003166 80.0
SYD3_k127_6097772_2 COGs COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 427.0
SYD3_k127_6097772_3 Peptidase C1-like family K01372 - 3.4.22.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 387.0
SYD3_k127_6097772_4 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 373.0
SYD3_k127_6097772_5 Electron transfer flavoprotein K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 353.0
SYD3_k127_6097772_6 Electron transfer flavoprotein domain K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 301.0
SYD3_k127_6097772_7 GlcNAc-PI de-N-acetylase K01463 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004599 294.0
SYD3_k127_6097772_8 regulator of chromosome condensation, RCC1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005032 290.0
SYD3_k127_6097772_9 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000002138 276.0
SYD3_k127_6120560_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 5.507e-199 646.0
SYD3_k127_6120560_1 coagulation factor 5 8 type K09955 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 553.0
SYD3_k127_6120560_11 30S ribosomal protein Thx K19033 - - 0.0001273 45.0
SYD3_k127_6120560_2 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 340.0
SYD3_k127_6120560_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 308.0
SYD3_k127_6120560_4 SPTR Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000003361 227.0
SYD3_k127_6120560_5 Raf kinase inhibitor-like protein K06910 - - 0.00000000000000000000000000000000000000000000000000006938 190.0
SYD3_k127_6120560_7 cellular response to DNA damage stimulus - - - 0.000000000000000000000001774 109.0
SYD3_k127_6120560_8 DNA-templated transcription, initiation K03088,K03091 - - 0.0000000000000000001111 96.0
SYD3_k127_6120560_9 cAMP biosynthetic process - - - 0.000000000006097 79.0
SYD3_k127_6267268_0 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006517 457.0
SYD3_k127_6267268_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 383.0
SYD3_k127_6267268_2 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000789 262.0
SYD3_k127_6267268_3 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000001268 143.0
SYD3_k127_6267268_4 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000000000000006871 135.0
SYD3_k127_6287910_0 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009357 414.0
SYD3_k127_6287910_1 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 400.0
SYD3_k127_6287910_2 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004442 342.0
SYD3_k127_6287910_3 PFAM Outer membrane protein, OmpA MotB, C-terminal - - - 0.000000000000000000000002496 121.0
SYD3_k127_6287910_4 C-terminal domain of CHU protein family - - - 0.000002841 50.0
SYD3_k127_6287910_5 transposase activity - - - 0.000003172 49.0
SYD3_k127_6287945_0 Glycosyl transferases group 1 - - - 8.694e-306 955.0
SYD3_k127_6287945_1 COGs COG2152 glycosylase K20885 - 2.4.1.339,2.4.1.340 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 546.0
SYD3_k127_6287945_2 PFAM Patatin-like phospholipase - - - 0.0000000000000000000000000000000000000000000000000000000000000003595 234.0
SYD3_k127_6287945_3 - - - - 0.00000000000000000000000003202 111.0
SYD3_k127_6287945_4 transposase activity - - - 0.000003172 49.0
SYD3_k127_6307048_0 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 547.0
SYD3_k127_6307048_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005948 437.0
SYD3_k127_6307048_2 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000009171 145.0
SYD3_k127_6307048_3 - - - - 0.0000000000008078 72.0
SYD3_k127_6324894_0 FeS assembly protein SufB K09014 - - 3.957e-250 778.0
SYD3_k127_6324894_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 548.0
SYD3_k127_6324894_2 FeS assembly ATPase SufC K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 379.0
SYD3_k127_6324894_3 FeS assembly protein SufD K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005483 324.0
SYD3_k127_6324894_4 Two component transcriptional regulator, winged helix family - - - 0.0000000000000000000000003327 105.0
SYD3_k127_6324894_5 YKOF-related Family - - - 0.00000000008382 65.0
SYD3_k127_6384000_0 PFAM TonB-dependent Receptor Plug - - - 0.0 1339.0
SYD3_k127_6384000_1 heme binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 319.0
SYD3_k127_6384000_2 Transcriptional regulatory protein, C terminal K07658 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001998 271.0
SYD3_k127_6384000_3 MOSC domain - - - 0.0000000000000000000000000000000001808 139.0
SYD3_k127_6384000_4 - - - - 0.000000000000005022 80.0
SYD3_k127_6384000_5 COG3209 Rhs family protein - - - 0.0000000000001424 76.0
SYD3_k127_6413426_0 Domain of unknown function (DUF5117) - - - 2.44e-305 955.0
SYD3_k127_6413426_1 Exodeoxyribonuclease V, gamma subunit K03657 - 3.6.4.12 1.443e-222 726.0
SYD3_k127_6413426_2 Beta-lactamase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006607 378.0
SYD3_k127_6413426_3 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002781 289.0
SYD3_k127_6413426_4 Arginase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008203 247.0
SYD3_k127_6413426_5 domain, Protein - - - 0.000000000000000000000000001442 114.0
SYD3_k127_6430383_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1083.0
SYD3_k127_6430383_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1082.0
SYD3_k127_6430383_10 - - - - 0.0000000000000000000000000000000004049 134.0
SYD3_k127_6430383_11 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000008391 126.0
SYD3_k127_6430383_12 Bacterial PH domain K09167 - - 0.000000000000000000000000001878 118.0
SYD3_k127_6430383_13 Biotin carboxyl carrier protein K01960 - 6.4.1.1 0.00000000000000000000000002924 115.0
SYD3_k127_6430383_2 protein CHP03519, membrane, Bacteroidetes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 369.0
SYD3_k127_6430383_3 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005196 287.0
SYD3_k127_6430383_4 Bacterial PH domain K08981 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002197 284.0
SYD3_k127_6430383_5 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007636 256.0
SYD3_k127_6430383_6 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000000000004235 203.0
SYD3_k127_6430383_7 mevalonate kinase activity K00054,K00869,K01641 - 1.1.1.88,2.3.3.10,2.7.1.36 0.00000000000000000000000000000000000000000000000005713 188.0
SYD3_k127_6430383_8 CYTH domain - - - 0.000000000000000000000000000000000000000000000001168 179.0
SYD3_k127_6430383_9 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000000000000000000001392 146.0
SYD3_k127_645315_0 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 335.0
SYD3_k127_645315_1 TIGRFAM ComEC Rec2-related protein K02238 - - 0.00000000000000000000000000000000000000000000001039 194.0
SYD3_k127_645315_2 Male sterility protein K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000004068 168.0
SYD3_k127_645315_3 Helix-hairpin-helix motif - - - 0.000000000000000000000000000000000000004722 160.0
SYD3_k127_645315_4 chlorophyll binding K03286 - - 0.000000000003991 76.0
SYD3_k127_645315_6 rRNA binding - - - 0.000000002101 68.0
SYD3_k127_6484045_0 Glutamate formimidoyltransferase K00603,K13990 - 2.1.2.5,4.3.1.4 4.023e-229 721.0
SYD3_k127_6484045_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003472 353.0
SYD3_k127_6484045_2 Chaperone of endosialidase - - - 0.0000000000008664 69.0
SYD3_k127_6495905_0 Sortilin, neurotensin receptor 3, - - - 0.0 1263.0
SYD3_k127_6495905_1 Outer membrane protein beta-barrel family - - - 1.284e-310 971.0
SYD3_k127_6495905_10 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007474 427.0
SYD3_k127_6495905_11 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003486 420.0
SYD3_k127_6495905_12 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 417.0
SYD3_k127_6495905_13 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000005996 273.0
SYD3_k127_6495905_14 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001739 258.0
SYD3_k127_6495905_15 ABC transporter, ATP-binding protein K09812 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002535 249.0
SYD3_k127_6495905_16 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000108 249.0
SYD3_k127_6495905_17 NADP oxidoreductase coenzyme F420-dependent - - - 0.00000000000000000000000000000000000000000000000000000000000002092 223.0
SYD3_k127_6495905_18 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000002104 213.0
SYD3_k127_6495905_2 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 2.381e-302 941.0
SYD3_k127_6495905_20 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.00000000000000000000000000000000000000000000000000000000229 213.0
SYD3_k127_6495905_21 - - - - 0.0000000000000000000000000000000000000000000000006629 181.0
SYD3_k127_6495905_22 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000000000000000000000007055 160.0
SYD3_k127_6495905_23 Transposase IS200 like - - - 0.000000000000000000000000000000000002487 148.0
SYD3_k127_6495905_24 Stress responsive A/B Barrel Domain - - - 0.0000000000000000003557 92.0
SYD3_k127_6495905_26 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0008914 51.0
SYD3_k127_6495905_3 PFAM Cytochrome c assembly protein K02198 - - 1.143e-293 929.0
SYD3_k127_6495905_4 Required for chromosome condensation and partitioning K03529 - - 2.095e-291 935.0
SYD3_k127_6495905_5 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 5.068e-261 814.0
SYD3_k127_6495905_6 Respiratory-chain NADH dehydrogenase 51 Kd subunit K00122,K00124,K00335 - 1.17.1.9,1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 590.0
SYD3_k127_6495905_7 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004909 539.0
SYD3_k127_6495905_8 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 527.0
SYD3_k127_6495905_9 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004154 487.0
SYD3_k127_6533411_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 2.287e-226 709.0
SYD3_k127_6533411_1 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005471 486.0
SYD3_k127_6533411_2 apolipoprotein N-acyltransferase K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 466.0
SYD3_k127_6533411_3 Fic/DOC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 439.0
SYD3_k127_6533411_4 ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004257 392.0
SYD3_k127_6533411_5 Tyrosine recombinase XerC K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005485 383.0
SYD3_k127_6533411_6 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004761 362.0
SYD3_k127_6533411_7 Bacterial Ig-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 340.0
SYD3_k127_6533411_8 Diacylglycerol kinase catalytic domain (presumed) - - - 0.0000000000000000000000000000000000000000000000000000003355 205.0
SYD3_k127_6533411_9 COGs COG0791 Cell wall-associated hydrolase (invasion-associated protein) - - - 0.00000000000000000000000001987 115.0
SYD3_k127_6543000_0 D-alanyl-D-alanine carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000225 290.0
SYD3_k127_6543000_1 Glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000175 242.0
SYD3_k127_6543000_2 Modulates RecA activity K03565 - - 0.00000000000000000000000000000000001328 140.0
SYD3_k127_6543000_3 - - - - 0.00000000002798 75.0
SYD3_k127_6543000_4 - - - - 0.000002905 53.0
SYD3_k127_6543000_5 - - - - 0.00005264 55.0
SYD3_k127_6554062_0 PFAM ASPIC and UnbV - - - 8.583e-286 914.0
SYD3_k127_6554062_1 PFAM FAD linked oxidase domain protein - - - 5.86e-201 635.0
SYD3_k127_6554062_10 Alpha-amylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007301 383.0
SYD3_k127_6554062_11 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000397 350.0
SYD3_k127_6554062_12 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004273 329.0
SYD3_k127_6554062_13 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 298.0
SYD3_k127_6554062_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001522 258.0
SYD3_k127_6554062_15 Peptidase M16 - - - 0.000000000000000000000000000000000000000000000000000000000000000000005353 251.0
SYD3_k127_6554062_16 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000006423 199.0
SYD3_k127_6554062_17 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000000000000000000001365 198.0
SYD3_k127_6554062_18 YceI-like domain - - - 0.0000000000000000000000000000000000000000000000001689 184.0
SYD3_k127_6554062_19 Carboxymuconolactone decarboxylase family - - - 0.000000000000000000000000000000000000000000000001815 179.0
SYD3_k127_6554062_2 TonB-dependent receptor - - - 3.967e-196 636.0
SYD3_k127_6554062_20 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000008631 170.0
SYD3_k127_6554062_21 Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000000000004809 162.0
SYD3_k127_6554062_22 rRNA (guanine-N2-)-methyltransferase activity - - - 0.0000000000000000000000000000000000000005002 158.0
SYD3_k127_6554062_23 - - - - 0.00000000000000000000000000000000002618 145.0
SYD3_k127_6554062_24 DNA/RNA non-specific endonuclease K01173 - - 0.000000000000000000000000000000007513 141.0
SYD3_k127_6554062_25 PFAM MerR family regulatory protein K22491 - - 0.0000000000000000000000000004506 124.0
SYD3_k127_6554062_26 - - - - 0.0000000000000000000000000007102 125.0
SYD3_k127_6554062_27 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000001015 111.0
SYD3_k127_6554062_28 Heavy metal transport detoxification protein K08364 - - 0.0000000000000009176 82.0
SYD3_k127_6554062_3 Two component regulator propeller domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 630.0
SYD3_k127_6554062_4 N-acetyl-alpha-D-glucosaminyl L-malate synthase K00754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 562.0
SYD3_k127_6554062_5 Aldehyde K13877,K14519 - 1.2.1.26,1.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 511.0
SYD3_k127_6554062_6 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 482.0
SYD3_k127_6554062_7 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007143 470.0
SYD3_k127_6554062_8 AMP-dependent synthetase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 407.0
SYD3_k127_6554062_9 Belongs to the DapA family K01714,K21062 - 3.5.4.22,4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 392.0
SYD3_k127_6557049_0 COGs COG2192 carbamoyl transferase NodU family K00612 - - 1.344e-247 775.0
SYD3_k127_6557049_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 571.0
SYD3_k127_6557049_10 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000001209 211.0
SYD3_k127_6557049_11 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000006392 201.0
SYD3_k127_6557049_12 GIY-YIG catalytic domain K07461 - - 0.000000000000000000000000000000000000000000000001288 177.0
SYD3_k127_6557049_13 Tellurite resistance protein TehB - - - 0.000000000000000000000000000001459 132.0
SYD3_k127_6557049_14 Glycosyl transferases group 1 - - - 0.00000000000000000000000000007532 120.0
SYD3_k127_6557049_2 asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008966 523.0
SYD3_k127_6557049_3 PFAM membrane bound O-acyl transferase, MBOAT family protein K19294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009314 518.0
SYD3_k127_6557049_4 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006829 457.0
SYD3_k127_6557049_5 Nucleotidyl transferase K00971 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 396.0
SYD3_k127_6557049_6 short-chain dehydrogenase reductase SDR K12454 - 5.1.3.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009509 393.0
SYD3_k127_6557049_7 COGs COG0463 Glycosyltransferase involved in cell wall biogenesis K13002 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000466 296.0
SYD3_k127_6557049_8 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004351 275.0
SYD3_k127_6557049_9 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000000000000000009661 227.0
SYD3_k127_6575052_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 1.674e-202 640.0
SYD3_k127_6575052_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 559.0
SYD3_k127_6575052_2 PFAM Tetratricopeptide - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003906 284.0
SYD3_k127_6575052_3 Peptidase, M23 family - - - 0.00000000000000000000000000000000000000000000000000001279 204.0
SYD3_k127_6575052_4 Domain of unknown function (DUF4292) - - - 0.000000000000000000000002893 112.0
SYD3_k127_6701512_0 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003375 593.0
SYD3_k127_6701512_1 DoxX - - - 0.00000000000000000000000000000000000000000000000894 174.0
SYD3_k127_6701512_2 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000000004317 172.0
SYD3_k127_6701512_3 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000000000000000007945 155.0
SYD3_k127_6719920_0 - - - - 7.38e-290 919.0
SYD3_k127_6723748_0 Glycosyl hydrolase family 63 C-terminal domain - - - 0.0 1286.0
SYD3_k127_6723748_1 TonB dependent receptor - - - 0.0 1153.0
SYD3_k127_6723748_10 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 305.0
SYD3_k127_6723748_11 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008601 282.0
SYD3_k127_6723748_12 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001653 237.0
SYD3_k127_6723748_13 phosphorelay sensor kinase activity K02342,K02660 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000008811 244.0
SYD3_k127_6723748_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000001864 224.0
SYD3_k127_6723748_15 - catabolite gene activator and regulatory subunit of cAMP-dependent protein K10914 - - 0.00000000000000000000000000000000000000000000000000000377 199.0
SYD3_k127_6723748_16 Methyltransferase domain - - - 0.000000000000000000000000000000000000000002898 161.0
SYD3_k127_6723748_17 Haem-degrading - - - 0.0000000000000000000000000000000001741 138.0
SYD3_k127_6723748_18 YHS domain - - - 0.000000000000000000000000000002623 132.0
SYD3_k127_6723748_19 Y_Y_Y domain - - - 0.00000000000000000000000000002276 123.0
SYD3_k127_6723748_2 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 7.709e-236 741.0
SYD3_k127_6723748_20 YHS domain protein - - - 0.00000000000000000000000001374 121.0
SYD3_k127_6723748_21 - - - - 0.00000000000000000000495 103.0
SYD3_k127_6723748_22 Protein of unknown function (DUF1622) - - - 0.0000000000000000000473 94.0
SYD3_k127_6723748_23 Cytochrome c - - - 0.00000000000000002055 86.0
SYD3_k127_6723748_24 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 - 3.6.1.13 0.00000000000009831 74.0
SYD3_k127_6723748_25 - - - - 0.00000000001523 70.0
SYD3_k127_6723748_3 Glycogen debranching enzyme - - - 5.121e-226 720.0
SYD3_k127_6723748_4 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006818 551.0
SYD3_k127_6723748_5 Glycogen recognition site of AMP-activated protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005473 483.0
SYD3_k127_6723748_6 Ferric reductase like transmembrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005446 458.0
SYD3_k127_6723748_7 Starch-binding associating with outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 389.0
SYD3_k127_6723748_8 Short-chain dehydrogenase reductase SDR K00034 - 1.1.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006418 379.0
SYD3_k127_6723748_9 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006478 360.0
SYD3_k127_6724957_0 Oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005553 585.0
SYD3_k127_6724957_1 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 411.0
SYD3_k127_6724957_2 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000006881 217.0
SYD3_k127_6724957_3 Histidine triad domain protein K02503 - - 0.00000000000000000000000000000000000000000000000001076 183.0
SYD3_k127_6724957_4 - - - - 0.00000000000000000000000000000000000005834 143.0
SYD3_k127_6724957_5 - - - - 0.0000000000000000000000000000000000001428 145.0
SYD3_k127_6724957_6 Tetratricopeptide repeat - - - 0.000000003028 69.0
SYD3_k127_6789682_0 AcrB/AcrD/AcrF family K07239 - - 0.0 1118.0
SYD3_k127_6789682_1 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 441.0
SYD3_k127_6843557_0 domain, Protein K20276 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008804 404.0
SYD3_k127_6843557_1 IMG reference gene - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 366.0
SYD3_k127_6843557_2 Conserved repeat domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001458 263.0
SYD3_k127_6855099_0 Animal haem peroxidase - - - 7.278e-223 704.0
SYD3_k127_6855099_1 Psort location CytoplasmicMembrane, score 10.00 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007015 594.0
SYD3_k127_6855099_2 COG NOG14456 non supervised orthologous group - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 295.0
SYD3_k127_6855099_3 lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000007674 273.0
SYD3_k127_6855099_4 Appr-1'-p processing enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000002766 239.0
SYD3_k127_6855099_5 - - - - 0.000000000000000000000000000000000000165 149.0
SYD3_k127_6902867_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 6.62e-226 711.0
SYD3_k127_6902867_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 501.0
SYD3_k127_6902867_10 Mrr N-terminal domain K07448 - - 0.0000000000000000000000000000000000000000000000000001208 187.0
SYD3_k127_6902867_11 O-antigen ligase like membrane protein K02847 - - 0.000000000000000000000000000000000006016 153.0
SYD3_k127_6902867_13 metallocarboxypeptidase activity - - - 0.000005896 56.0
SYD3_k127_6902867_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006675 356.0
SYD3_k127_6902867_3 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007421 327.0
SYD3_k127_6902867_4 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004321 295.0
SYD3_k127_6902867_5 TIGRFAM Por secretion system C-terminal sorting domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005426 295.0
SYD3_k127_6902867_6 Psort location CytoplasmicMembrane, score 10.00 K12343 - 1.3.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000002768 269.0
SYD3_k127_6902867_7 NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000000000000000000000000002644 262.0
SYD3_k127_6902867_8 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003046 257.0
SYD3_k127_6902867_9 - - - - 0.000000000000000000000000000000000000000000000000000000002949 212.0
SYD3_k127_6921002_0 SprB repeat - - - 7.186e-202 684.0
SYD3_k127_6921002_1 drug metabolite-transporting permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 335.0
SYD3_k127_6921002_2 Protein of unknown function (DUF1697) - - - 0.0000000000000000000000000000000000000005685 154.0
SYD3_k127_6921002_3 metallopeptidase activity - - - 0.0000000000000000000007203 113.0
SYD3_k127_6921002_4 Transport of potassium into the cell K03549 - - 0.0000002703 55.0
SYD3_k127_6930954_0 domain protein K20276 - - 0.000000000000000000000000000009047 138.0
SYD3_k127_6930954_1 cellulose binding - - - 0.000006235 58.0
SYD3_k127_7004213_0 PFAM Tetratricopeptide - - - 9.289e-255 821.0
SYD3_k127_7004213_1 PFAM AMP-dependent synthetase and ligase K01907 - 6.2.1.16 2.351e-241 762.0
SYD3_k127_7004213_2 Cys/Met metabolism PLP-dependent enzyme K01761 - 4.4.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 415.0
SYD3_k127_7004213_3 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 402.0
SYD3_k127_7004213_4 LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 383.0
SYD3_k127_7004213_5 Psort location OuterMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 368.0
SYD3_k127_7004213_6 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000007427 210.0
SYD3_k127_7004213_7 long-chain fatty acid transport protein - - - 0.000000001792 68.0
SYD3_k127_7004213_8 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000001794 64.0
SYD3_k127_7004213_9 - - - - 0.0008862 50.0
SYD3_k127_7018216_0 BNR Asp-box repeat - - - 0.0 1361.0
SYD3_k127_7018216_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1226.0
SYD3_k127_7018216_10 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000001598 251.0
SYD3_k127_7018216_11 Alpha/beta hydrolase family K07020 - - 0.0000000000000000000000000000000000000000000000000000000003656 209.0
SYD3_k127_7018216_12 Peptide-methionine (R)-S-oxide reductase K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000007233 203.0
SYD3_k127_7018216_13 Transport and Golgi organisation 2 - - - 0.00000000000000000000000000000000000000000000000305 183.0
SYD3_k127_7018216_14 NUDIX domain - - - 0.00000000000000000000000000000000000000000000003423 174.0
SYD3_k127_7018216_15 DinB family - - - 0.000000000000000000000000000834 120.0
SYD3_k127_7018216_16 LysE type translocator - - - 0.0000000000000000000000001216 114.0
SYD3_k127_7018216_2 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003636 567.0
SYD3_k127_7018216_3 COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 512.0
SYD3_k127_7018216_4 metallopeptidase activity K07282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005659 456.0
SYD3_k127_7018216_5 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008257 418.0
SYD3_k127_7018216_6 Mg2 transporter protein, CorA family protein K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007887 389.0
SYD3_k127_7018216_7 domain protein K13735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 312.0
SYD3_k127_7018216_8 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003748 284.0
SYD3_k127_7018216_9 ligase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001798 289.0
SYD3_k127_7059440_0 permease - - - 7.3e-322 1004.0
SYD3_k127_7059440_1 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003798 443.0
SYD3_k127_7059440_2 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000000106 163.0
SYD3_k127_7079229_0 AAA ATPase domain - - - 0.0 1736.0
SYD3_k127_7079229_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1142.0
SYD3_k127_7079229_10 ABC transporter K06158 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 542.0
SYD3_k127_7079229_11 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000573 519.0
SYD3_k127_7079229_12 DNA polymerase III, epsilon subunit K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 468.0
SYD3_k127_7079229_13 Carbohydrate esterase, sialic acid-specific acetylesterase K05970 - 3.1.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000389 455.0
SYD3_k127_7079229_14 PFAM peptidase T2 asparaginase 2 K01444,K13051 - 3.4.19.5,3.5.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 448.0
SYD3_k127_7079229_15 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006949 445.0
SYD3_k127_7079229_16 PFAM Uncharacterised conserved protein UCP016719 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009607 443.0
SYD3_k127_7079229_17 NAD dependent epimerase dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 380.0
SYD3_k127_7079229_18 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 376.0
SYD3_k127_7079229_2 Bacterial protein of unknown function (DUF853) K06915 - - 1.42e-215 681.0
SYD3_k127_7079229_20 LytTr DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 356.0
SYD3_k127_7079229_21 catalase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008267 361.0
SYD3_k127_7079229_22 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 355.0
SYD3_k127_7079229_23 CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009456 347.0
SYD3_k127_7079229_24 fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 353.0
SYD3_k127_7079229_25 beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 337.0
SYD3_k127_7079229_26 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003956 314.0
SYD3_k127_7079229_27 Belongs to the UPF0173 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 308.0
SYD3_k127_7079229_28 GTP cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005405 303.0
SYD3_k127_7079229_29 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 302.0
SYD3_k127_7079229_3 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 2.458e-208 662.0
SYD3_k127_7079229_30 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003688 285.0
SYD3_k127_7079229_31 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002398 266.0
SYD3_k127_7079229_32 chaperone-mediated protein folding K08309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003676 274.0
SYD3_k127_7079229_33 acr, cog1678 K07735 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003651 245.0
SYD3_k127_7079229_34 DNA/RNA non-specific endonuclease K01173 - - 0.000000000000000000000000000000000000000000000000000000000000000000002121 245.0
SYD3_k127_7079229_35 Protein of unknown function (DUF3810) - - - 0.000000000000000000000000000000000000000000000000000000000000000001331 241.0
SYD3_k127_7079229_36 Chloramphenicol acetyltransferase K19271 - 2.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000004086 231.0
SYD3_k127_7079229_37 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000002075 231.0
SYD3_k127_7079229_38 Tetratricopeptide - - - 0.000000000000000000000000000000000000000000000000000000000001976 216.0
SYD3_k127_7079229_39 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000004679 228.0
SYD3_k127_7079229_4 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 1.123e-202 636.0
SYD3_k127_7079229_40 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000000000000000000008239 203.0
SYD3_k127_7079229_41 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000003001 200.0
SYD3_k127_7079229_42 COG1331 Highly conserved protein containing a thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000005693 196.0
SYD3_k127_7079229_43 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000002324 195.0
SYD3_k127_7079229_44 Pseudouridine synthase K06179,K06180 - 5.4.99.23,5.4.99.24 0.000000000000000000000000000000000000000000000000006512 189.0
SYD3_k127_7079229_45 SpoOM protein - - - 0.0000000000000000000000000000000000000000000003002 171.0
SYD3_k127_7079229_46 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000002736 161.0
SYD3_k127_7079229_47 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.000000000000000000000000000000000000000004348 165.0
SYD3_k127_7079229_48 photosystem II stabilization - - - 0.00000000000000000000000000000000000009313 153.0
SYD3_k127_7079229_49 Acyl carrier protein phosphodiesterase - - - 0.00000000000000000000000000004855 124.0
SYD3_k127_7079229_5 glycosyl transferase family 2 K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000466 629.0
SYD3_k127_7079229_50 protein trimerization K05807 - - 0.00000000000000000000005882 110.0
SYD3_k127_7079229_51 regulation of response to stimulus K07483,K09800 - - 0.0000000000000000004796 103.0
SYD3_k127_7079229_52 Hint domain - - - 0.0000000000002139 84.0
SYD3_k127_7079229_53 Carbohydrate esterase, sialic acid-specific acetylesterase K05970 - 3.1.1.53 0.0000000000003104 71.0
SYD3_k127_7079229_55 - - - - 0.0009424 46.0
SYD3_k127_7079229_6 catalase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 612.0
SYD3_k127_7079229_7 4Fe-4S binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005965 587.0
SYD3_k127_7079229_8 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005419 555.0
SYD3_k127_7079229_9 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007384 533.0
SYD3_k127_710734_0 Pyrrolo-quinoline quinone K00117 - 1.1.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005154 469.0
SYD3_k127_710734_1 flavoprotein involved in K transport K07222,K11816 - 1.14.13.168 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 396.0
SYD3_k127_7121270_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 455.0
SYD3_k127_7121270_1 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 346.0
SYD3_k127_7121270_10 oxidation-reduction process K09022 - 3.5.99.10 0.00000000000000000000000000000000000001247 149.0
SYD3_k127_7121270_11 - - - - 0.0000000000000000000000000000000001145 149.0
SYD3_k127_7121270_12 Chromatin associated protein KTI12 - - - 0.0000000000000000000000000000004447 130.0
SYD3_k127_7121270_13 - - - - 0.00000000000000000000000000604 125.0
SYD3_k127_7121270_14 - - - - 0.0000000000000001297 81.0
SYD3_k127_7121270_16 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000002539 65.0
SYD3_k127_7121270_17 PFAM Peptidase M56, BlaR1 - - - 0.00002419 46.0
SYD3_k127_7121270_2 GDSL-like Lipase/Acylhydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001689 290.0
SYD3_k127_7121270_3 AAA domain K07028 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007957 272.0
SYD3_k127_7121270_4 Domain of unknown function (DUF4287) - - - 0.00000000000000000000000000000000000000000000000000000000000917 212.0
SYD3_k127_7121270_5 Putative restriction endonuclease - - - 0.000000000000000000000000000000000000000000000000000001792 197.0
SYD3_k127_7121270_6 SdiA-regulated - - - 0.000000000000000000000000000000000000000000000003543 185.0
SYD3_k127_7121270_7 response to heat K03668,K09914 - - 0.00000000000000000000000000000000000000000000004497 178.0
SYD3_k127_7121270_8 Sporulation protein YtfJ (Spore_YtfJ) - - - 0.00000000000000000000000000000000000000000003432 164.0
SYD3_k127_7121270_9 PFAM Penicillinase repressor - - - 0.00000000000000000000000000000000000000007011 154.0
SYD3_k127_7151683_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1825.0
SYD3_k127_7151683_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1210.0
SYD3_k127_7151683_10 PFAM Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000001157 168.0
SYD3_k127_7151683_11 Glycosyl hydrolase family 65, N-terminal domain - - - 0.0000000000000000000003123 97.0
SYD3_k127_7151683_12 HEPN domain - - - 0.00000000001192 70.0
SYD3_k127_7151683_13 - K01611 - 4.1.1.50 0.0000000005509 65.0
SYD3_k127_7151683_14 - - - - 0.000002384 55.0
SYD3_k127_7151683_15 acetyltransferases and hydrolases with the alpha beta hydrolase fold K01046 - 3.1.1.3 0.0005124 54.0
SYD3_k127_7151683_2 COGs COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase - - - 1.919e-269 837.0
SYD3_k127_7151683_3 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 9.163e-201 639.0
SYD3_k127_7151683_4 B-1 B cell differentiation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 456.0
SYD3_k127_7151683_5 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009714 358.0
SYD3_k127_7151683_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003695 312.0
SYD3_k127_7151683_7 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000499 306.0
SYD3_k127_7151683_8 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007288 267.0
SYD3_k127_7151683_9 Transposase IS200 like - - - 0.0000000000000000000000000000000000000000000005666 169.0
SYD3_k127_7164885_0 Ribosomal protein S1 K02945 - - 6.68e-294 925.0
SYD3_k127_7164885_1 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 1.038e-231 728.0
SYD3_k127_7164885_10 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000001658 157.0
SYD3_k127_7164885_11 - - - - 0.000000000000000000000000000000000000002655 147.0
SYD3_k127_7164885_12 Transposase IS200 like - - - 0.000000000000000000000000000001627 126.0
SYD3_k127_7164885_13 - - - - 0.00000000000000000000000000009666 115.0
SYD3_k127_7164885_14 Tetratricopeptide repeat - - - 0.000000000000000002328 97.0
SYD3_k127_7164885_15 - - - - 0.0000000000000003142 79.0
SYD3_k127_7164885_16 Transposase - - - 0.00000000001688 68.0
SYD3_k127_7164885_17 - - - - 0.00000000005195 67.0
SYD3_k127_7164885_18 - - - - 0.00000003833 54.0
SYD3_k127_7164885_2 Belongs to the citrate synthase family K01647 - 2.3.3.1 6.077e-203 640.0
SYD3_k127_7164885_3 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 361.0
SYD3_k127_7164885_4 enterobactin catabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008963 330.0
SYD3_k127_7164885_5 COG1705 Muramidase (flagellum-specific) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 296.0
SYD3_k127_7164885_6 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000001305 189.0
SYD3_k127_7164885_7 ABC-type Na efflux pump, permease component K01992 - - 0.0000000000000000000000000000000000000000000000372 180.0
SYD3_k127_7164885_8 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000004089 168.0
SYD3_k127_7176380_0 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 570.0
SYD3_k127_7176380_1 L-lysine 6-monooxygenase (NADPH-requiring) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009858 567.0
SYD3_k127_7176380_10 OmpA MotB domain protein K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 367.0
SYD3_k127_7176380_11 ferredoxin-NADP+ reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 298.0
SYD3_k127_7176380_12 glycosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001044 248.0
SYD3_k127_7176380_13 Uroporphyrin-iii c tetrapyrrole (Corrin porphyrin) methyltransferase K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000001804 241.0
SYD3_k127_7176380_14 Two component transcriptional regulator, LytTR family K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000001959 234.0
SYD3_k127_7176380_15 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000006878 219.0
SYD3_k127_7176380_16 Collagen triple helix repeat (20 copies) - - - 0.00000000000000000000002893 116.0
SYD3_k127_7176380_17 - - - - 0.00000000000000000000004111 101.0
SYD3_k127_7176380_18 - - - - 0.000000000000000000004004 101.0
SYD3_k127_7176380_19 LytTR family two component system response regulatory protein K02477 - - 0.0000000000000000006697 91.0
SYD3_k127_7176380_2 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 567.0
SYD3_k127_7176380_20 Chaperone of endosialidase - - - 0.00000000000006639 86.0
SYD3_k127_7176380_22 Hep Hag repeat protein - - - 0.000000004885 70.0
SYD3_k127_7176380_23 domain, Protein K13735,K21449 - - 0.00005087 57.0
SYD3_k127_7176380_3 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 505.0
SYD3_k127_7176380_4 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 490.0
SYD3_k127_7176380_5 fatty acid desaturase K00508 - 1.14.19.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009884 435.0
SYD3_k127_7176380_6 fatty acid desaturase K00508 - 1.14.19.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005455 424.0
SYD3_k127_7176380_7 PFAM FAD dependent oxidoreductase K00285 - 1.4.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 422.0
SYD3_k127_7176380_8 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 416.0
SYD3_k127_7176380_9 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 441.0
SYD3_k127_7185531_0 IMG reference gene - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 505.0
SYD3_k127_7185531_1 protein secretion - - - 0.000000000000000000006202 100.0
SYD3_k127_7185531_2 guanyl-nucleotide exchange factor activity - - - 0.000001379 64.0
SYD3_k127_7208956_0 Sodium hydrogen exchanger - - - 5.219e-305 948.0
SYD3_k127_7208956_1 PFAM Prenyltransferase squalene oxidase - - - 0.0000000000000000000000000000000000000000000000000000001282 207.0
SYD3_k127_7252485_0 with chaperone activity ATP-binding subunit K03696 - - 0.0 1257.0
SYD3_k127_7252485_1 LmbE family - - - 9.687e-276 871.0
SYD3_k127_7252485_10 GTP cyclohydrolase II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001297 246.0
SYD3_k127_7252485_11 transporter antisigma-factor antagonist STAS - - - 0.000000000000000000000000000000000000000000000001026 177.0
SYD3_k127_7252485_12 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000003704 135.0
SYD3_k127_7252485_16 SprB repeat - - - 0.00002546 57.0
SYD3_k127_7252485_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 1.06e-200 640.0
SYD3_k127_7252485_3 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000667 610.0
SYD3_k127_7252485_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 440.0
SYD3_k127_7252485_5 PFAM MazG nucleotide pyrophosphohydrolase K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005235 341.0
SYD3_k127_7252485_6 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 326.0
SYD3_k127_7252485_7 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006388 290.0
SYD3_k127_7252485_8 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001319 284.0
SYD3_k127_7252485_9 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001636 273.0
SYD3_k127_7275885_0 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) K00382 - 1.8.1.4 1.177e-236 738.0
SYD3_k127_7275885_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 531.0
SYD3_k127_7275885_2 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 376.0
SYD3_k127_7275885_3 Nuclease, EndA NucM family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007006 250.0
SYD3_k127_7275885_4 5'-nucleotidase K01081 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000001443 211.0
SYD3_k127_7275885_5 PFAM Receptor L domain - - - 0.0000000000000000000000000000000000000000000000000009091 201.0
SYD3_k127_7275885_6 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000000000000000005159 166.0
SYD3_k127_7275885_7 - - - - 0.0000000000000000000000000001318 121.0
SYD3_k127_7283474_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 1.592e-278 865.0
SYD3_k127_7283474_1 Pyridoxal-phosphate dependent enzyme K06001 - 4.2.1.20 3.443e-237 742.0
SYD3_k127_7283474_10 Domain of unknown function (DUF4212) - - - 0.00000000000000000000000000002262 120.0
SYD3_k127_7283474_11 COG3209 Rhs family protein - - - 0.0000000000000000000002374 109.0
SYD3_k127_7283474_12 Chaperone of endosialidase - - - 0.000000001716 70.0
SYD3_k127_7283474_13 Chaperone of endosialidase - - - 0.0000106 57.0
SYD3_k127_7283474_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 538.0
SYD3_k127_7283474_3 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004473 408.0
SYD3_k127_7283474_4 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001256 275.0
SYD3_k127_7283474_5 Two component transcriptional regulator, LytTR family K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002349 277.0
SYD3_k127_7283474_6 Chaperone of endosialidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001712 269.0
SYD3_k127_7283474_7 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000003737 194.0
SYD3_k127_7283474_8 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000001694 199.0
SYD3_k127_7283474_9 Parallel beta-helix repeats - - - 0.000000000000000000000000000000000000000000004209 183.0
SYD3_k127_7286711_0 ASPIC and UnbV - - - 0.0 1381.0
SYD3_k127_7286711_1 ASPIC and UnbV - - - 0.0 1180.0
SYD3_k127_7286711_2 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006915 394.0
SYD3_k127_7286711_3 Pfam:SusD K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005386 282.0
SYD3_k127_7307405_0 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009306 512.0
SYD3_k127_7307405_1 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006682 501.0
SYD3_k127_7307405_2 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 397.0
SYD3_k127_7307405_3 ABC transporter K18889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 316.0
SYD3_k127_7307405_4 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000431 317.0
SYD3_k127_7307405_5 SMART PUR-alpha beta gamma DNA RNA-binding - - - 0.00000000000000000000000000000000000000000001588 166.0
SYD3_k127_738760_0 hemolysin activation secretion protein - - - 1.411e-281 902.0
SYD3_k127_738760_1 ribonuclease, Rne Rng family K08301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 608.0
SYD3_k127_738760_10 - - - - 0.0000004471 51.0
SYD3_k127_738760_11 Glycosyl transferase family 1 - - - 0.000008385 50.0
SYD3_k127_738760_12 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0001957 54.0
SYD3_k127_738760_2 transferase activity, transferring glycosyl groups K13500 - 2.4.1.175,2.4.1.226 0.0000000000000000000000000000000000000000000000000000000000000000004375 238.0
SYD3_k127_738760_3 PFAM YicC-like family, N-terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000001714 239.0
SYD3_k127_738760_4 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000001083 224.0
SYD3_k127_738760_5 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000001314 180.0
SYD3_k127_738760_6 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00000000000000000000000000000000000000000001011 168.0
SYD3_k127_738760_7 Belongs to the bacterial histone-like protein family K03530 - - 0.000000000000000000000000000000000000000006303 158.0
SYD3_k127_738760_8 protein affecting Mg2 Co2 transport K06195 - - 0.00000000000000000000000000000000004367 138.0
SYD3_k127_738760_9 - - - - 0.000000000000001167 82.0
SYD3_k127_7410092_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 4.156e-216 685.0
SYD3_k127_7410092_1 Trehalose utilisation K09992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005953 270.0
SYD3_k127_7410092_2 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000002086 246.0
SYD3_k127_7410092_3 carbonic anhydrase acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000002979 230.0
SYD3_k127_7412285_0 DNA helicase K03657 - 3.6.4.12 7.833e-278 873.0
SYD3_k127_7412285_1 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003502 318.0
SYD3_k127_7412285_2 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000002149 192.0
SYD3_k127_7412285_3 Pfam:DUF2029 - - - 0.00000000000000000000000000000000000000000000000000001219 199.0
SYD3_k127_7412285_4 mechanosensitive ion channel K22044 - - 0.00000000000000000000000000000000000000000000000003081 190.0
SYD3_k127_7412285_5 Pkd domain containing protein - - - 0.000456 50.0
SYD3_k127_7519303_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 2.872e-208 651.0
SYD3_k127_7519303_1 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 517.0
SYD3_k127_7519303_10 Psort location Cytoplasmic, score 8.96 - - - 0.0000000002319 65.0
SYD3_k127_7519303_2 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 393.0
SYD3_k127_7519303_3 Transporter associated domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003804 378.0
SYD3_k127_7519303_4 Pfam Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 322.0
SYD3_k127_7519303_5 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008026 296.0
SYD3_k127_7519303_6 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000002178 235.0
SYD3_k127_7519303_7 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000001477 136.0
SYD3_k127_7519303_8 Lipopolysaccharide-assembly, LptC-related - - - 0.000000000000000000000000000004134 126.0
SYD3_k127_7519303_9 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000003385 104.0
SYD3_k127_7549530_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 2.914e-207 661.0
SYD3_k127_7549530_1 ASPIC and UnbV - - - 7.582e-206 661.0
SYD3_k127_7549530_2 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 610.0
SYD3_k127_7549530_3 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 604.0
SYD3_k127_7549530_4 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004779 593.0
SYD3_k127_7549530_5 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005991 289.0
SYD3_k127_7549530_6 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 290.0
SYD3_k127_7549530_7 PFAM Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006981 272.0
SYD3_k127_7549530_8 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000032 209.0
SYD3_k127_7549530_9 Rhomboid family K09650 - 3.4.21.105 0.000000000000000000000000000000000000000000000215 176.0
SYD3_k127_758547_0 Fructosamine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000003125 222.0
SYD3_k127_758547_1 - - - - 0.000000000000000000000000000000000000000002057 160.0
SYD3_k127_7627815_0 peptidase S9 prolyl oligopeptidase active site domain protein - - - 1.532e-275 876.0
SYD3_k127_7627815_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 1.162e-251 790.0
SYD3_k127_7627815_10 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.0000000000000000000000000002591 120.0
SYD3_k127_7627815_12 tail collar domain protein - - - 0.0000000000002352 82.0
SYD3_k127_7627815_13 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - - - 0.0000005975 53.0
SYD3_k127_7627815_2 Peptidase family M1 domain K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 553.0
SYD3_k127_7627815_3 Peptidase M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009817 446.0
SYD3_k127_7627815_4 PFAM NAD dependent epimerase dehydratase family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 412.0
SYD3_k127_7627815_5 Predicted membrane protein (DUF2207) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 312.0
SYD3_k127_7627815_6 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 - 3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 295.0
SYD3_k127_7627815_7 Pfam:PNPOx_C K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000002168 243.0
SYD3_k127_7627815_8 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000002407 184.0
SYD3_k127_7627815_9 Protein of unknown function (DUF1566) - - - 0.0000000000000000000000000000001243 138.0
SYD3_k127_7647901_0 Alpha-L-fucosidase K01206 - 3.2.1.51 5.893e-214 673.0
SYD3_k127_7647901_1 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 472.0
SYD3_k127_7647901_2 ribonuclease BN K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 322.0
SYD3_k127_7647901_3 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002391 262.0
SYD3_k127_7647901_4 arginyl-trna synthetase - - - 0.00000000000000000000000000000000000000000003066 184.0
SYD3_k127_7647901_5 surface antigen - - - 0.00000000000000000000000000000000000283 156.0
SYD3_k127_7647901_6 domain, Protein - - - 0.00000000000000000000000000007651 134.0
SYD3_k127_7647901_7 Chaperone of endosialidase - - - 0.000000000000000000000004149 119.0
SYD3_k127_7651862_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 4.194e-222 698.0
SYD3_k127_7651862_1 PFAM Glyoxalase bleomycin resistance protein dioxygenase K00457 - 1.13.11.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 569.0
SYD3_k127_7651862_2 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007139 329.0
SYD3_k127_7651862_3 alkyl hydroperoxide reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005591 280.0
SYD3_k127_7651862_4 Calcineurin-like phosphoesterase superfamily domain K03651 - 3.1.4.53 0.00000000000000000000000000000000000000000000000000000000397 207.0
SYD3_k127_7651862_5 homogentisate 12-dioxygenase K00451 - 1.13.11.5 0.000000000000000000000003866 102.0
SYD3_k127_7651862_6 COG1404 Subtilisin-like serine proteases - - - 0.000000000000000000003039 108.0
SYD3_k127_7651862_7 transcriptional regulators - - - 0.0000003744 57.0
SYD3_k127_7678617_0 ABC-type transport system involved in lipoprotein release permease component K09808,K09815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 393.0
SYD3_k127_7678617_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 332.0
SYD3_k127_7678617_2 Peptidyl-prolyl cis-trans isomerase K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000006305 258.0
SYD3_k127_7678617_4 PFAM Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000008406 239.0
SYD3_k127_7678617_5 - - - - 0.0000000000000000000000000000000000004049 143.0
SYD3_k127_7691478_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 3.568e-247 778.0
SYD3_k127_7691478_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003419 569.0
SYD3_k127_7691478_2 Protein of unknown function (DUF1624) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 449.0
SYD3_k127_7691478_3 PFAM Spore coat protein CotH - - - 0.0000000000000000000000000000000000000000000000000000000000000000005319 237.0
SYD3_k127_7691478_4 Acetyltransferase (GNAT) domain K03829 - - 0.0000000000000000000000000000000000000000000000000000000000002543 215.0
SYD3_k127_7691478_5 regulatory protein, arsR - - - 0.00000003088 60.0
SYD3_k127_7698679_0 IMG reference gene - - - 0.0 1208.0
SYD3_k127_7698679_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 6.794e-240 751.0
SYD3_k127_7698679_10 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000001196 143.0
SYD3_k127_7698679_11 cellulose binding - - - 0.00000000004324 75.0
SYD3_k127_7698679_12 amine dehydrogenase activity - - - 0.00000004103 69.0
SYD3_k127_7698679_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 8.575e-239 766.0
SYD3_k127_7698679_3 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 600.0
SYD3_k127_7698679_4 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 321.0
SYD3_k127_7698679_5 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001145 287.0
SYD3_k127_7698679_6 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000003842 243.0
SYD3_k127_7698679_7 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000000000000003828 224.0
SYD3_k127_7698679_8 CAAX amino terminal protease family K07052 - - 0.00000000000000000000000000000000000000000000947 173.0
SYD3_k127_7698679_9 Acyl-transferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000009827 169.0
SYD3_k127_7717289_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 3.175e-280 886.0
SYD3_k127_7717289_1 PFAM TonB-dependent Receptor K16091 - - 2.267e-261 825.0
SYD3_k127_7717289_10 signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 319.0
SYD3_k127_7717289_11 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 313.0
SYD3_k127_7717289_12 Domain of unknown function (DUF4837) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002006 284.0
SYD3_k127_7717289_13 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001802 268.0
SYD3_k127_7717289_14 Hep Hag repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006318 269.0
SYD3_k127_7717289_15 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000172 243.0
SYD3_k127_7717289_16 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000397 266.0
SYD3_k127_7717289_17 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001708 239.0
SYD3_k127_7717289_18 Protein of unknown function (DUF3109) - - - 0.000000000000000000000000000000000000000000000000000000000003374 213.0
SYD3_k127_7717289_19 PHP domain protein - - - 0.0000000000000000000000000000000000000000000000000000000001952 217.0
SYD3_k127_7717289_2 PAP2 superfamily - - - 1.68e-246 769.0
SYD3_k127_7717289_20 Participates in initiation and elongation during chromosome replication - - - 0.00000000000000000000000000000000000000000000000000000001496 214.0
SYD3_k127_7717289_21 Protein of unknown function (DUF4230) - - - 0.0000000000000000000000000000000000000003122 156.0
SYD3_k127_7717289_22 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000000000003388 152.0
SYD3_k127_7717289_23 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000001253 123.0
SYD3_k127_7717289_24 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000001411 127.0
SYD3_k127_7717289_25 - - - - 0.000000000000000000000000001058 119.0
SYD3_k127_7717289_26 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell - - - 0.00000000000000000000000001704 118.0
SYD3_k127_7717289_3 Participates in both transcription termination and antitermination K02600 - - 1.066e-206 648.0
SYD3_k127_7717289_4 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006003 575.0
SYD3_k127_7717289_5 Phosphoesterase PA-phosphatase related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 513.0
SYD3_k127_7717289_6 peptidylprolyl isomerase K01802,K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332 523.0
SYD3_k127_7717289_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007255 353.0
SYD3_k127_7717289_8 Protein of unknown function (DUF2400) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004969 333.0
SYD3_k127_7717289_9 PFAM Phosphatidic acid phosphatase type 2 haloperoxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 340.0
SYD3_k127_7771210_0 Concanavalin A-like lectin/glucanases superfamily - - - 6.71e-235 747.0
SYD3_k127_7771210_1 SusD family K21572 - - 5.716e-199 632.0
SYD3_k127_7775432_0 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003981 430.0
SYD3_k127_7775432_1 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005905 374.0
SYD3_k127_7775432_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000001608 210.0
SYD3_k127_7775432_3 Putative beta-lactamase-inhibitor-like, PepSY-like - - - 0.0000000000001821 81.0
SYD3_k127_7780390_0 Motility related/secretion protein - - - 0.0 2100.0
SYD3_k127_7780390_1 domain protein - - - 0.0 1072.0
SYD3_k127_7780390_10 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 490.0
SYD3_k127_7780390_11 amidohydrolase K20810 - 3.5.4.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000945 477.0
SYD3_k127_7780390_12 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007983 459.0
SYD3_k127_7780390_13 Glycosyl hydrolases family 2, TIM barrel domain K01190 - 3.2.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 443.0
SYD3_k127_7780390_14 alginic acid biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007107 433.0
SYD3_k127_7780390_15 ferredoxin-NADP+ reductase activity K00384,K21567 - 1.18.1.2,1.19.1.1,1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 415.0
SYD3_k127_7780390_16 PFAM FAD dependent oxidoreductase K15736 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000451 403.0
SYD3_k127_7780390_17 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 387.0
SYD3_k127_7780390_18 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 309.0
SYD3_k127_7780390_19 Parallel beta-helix repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002365 275.0
SYD3_k127_7780390_2 Alpha-glucosidase K01187,K21574 - 3.2.1.20,3.2.1.3 0.0 1056.0
SYD3_k127_7780390_20 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000644 265.0
SYD3_k127_7780390_21 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007981 263.0
SYD3_k127_7780390_22 peptide-methionine (R)-S-oxide reductase K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000001143 220.0
SYD3_k127_7780390_23 Protein of unknown function (DUF819) - - - 0.00000000000000000000000000000000000000000000000000000000000002044 229.0
SYD3_k127_7780390_24 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000000000000000000003584 208.0
SYD3_k127_7780390_25 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000001773 214.0
SYD3_k127_7780390_26 deoxyhypusine monooxygenase activity - - - 0.00000000000000000000000000000000000000000000000000000005406 202.0
SYD3_k127_7780390_27 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000001565 192.0
SYD3_k127_7780390_28 Peroxiredoxin K04063 - - 0.0000000000000000000000000000000000000000000000000009876 186.0
SYD3_k127_7780390_29 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.000000000000000000000000000000000000000000000002371 183.0
SYD3_k127_7780390_3 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 2.367e-311 964.0
SYD3_k127_7780390_30 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000262 181.0
SYD3_k127_7780390_31 Protein of unknown function (DUF1572) - - - 0.00000000000000000000000000000000000000000000006363 173.0
SYD3_k127_7780390_32 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000002511 167.0
SYD3_k127_7780390_33 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000000002766 153.0
SYD3_k127_7780390_34 - - - - 0.00000000000000000000000000000000000008971 147.0
SYD3_k127_7780390_35 GCN5-related N-acetyl-transferase K06975 - - 0.00000000000000000000000000001359 123.0
SYD3_k127_7780390_36 Dodecin K09165 - - 0.0000000000000005846 79.0
SYD3_k127_7780390_37 Domain of unknown function (DUF4783) - - - 0.000000000000006211 79.0
SYD3_k127_7780390_38 Protein of unknown function (DUF1648) - - - 0.0000000000001038 77.0
SYD3_k127_7780390_39 - - - - 0.0000000000001462 78.0
SYD3_k127_7780390_4 Amidophosphoribosyltransferase K00764 - 2.4.2.14 1.083e-283 884.0
SYD3_k127_7780390_41 Psort location CytoplasmicMembrane, score - - - 0.000000000002021 73.0
SYD3_k127_7780390_43 Pkd domain containing protein - - - 0.000000463 62.0
SYD3_k127_7780390_44 - - - - 0.0006594 52.0
SYD3_k127_7780390_5 ATP dependent DNA ligase C terminal region K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 6.684e-196 625.0
SYD3_k127_7780390_6 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K01929 - 5.1.1.1,6.3.2.10 2.326e-195 644.0
SYD3_k127_7780390_7 Tetratricopeptide repeat - - - 4.418e-195 625.0
SYD3_k127_7780390_8 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 2.683e-194 618.0
SYD3_k127_7780390_9 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006566 604.0
SYD3_k127_7781943_0 Concanavalin A-like lectin/glucanases superfamily - - - 0.0 1377.0
SYD3_k127_7781943_1 Heat shock protein Hsp90 K04079 - - 3.089e-258 811.0
SYD3_k127_7781943_10 metallopeptidase activity - - - 0.000000000000000000000002975 120.0
SYD3_k127_7781943_11 23S rRNA-intervening sequence protein - - - 0.000000000000000000000003485 106.0
SYD3_k127_7781943_2 PPIC-type PPIASE domain K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003742 514.0
SYD3_k127_7781943_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 537.0
SYD3_k127_7781943_4 peptidylprolyl isomerase K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006084 470.0
SYD3_k127_7781943_5 Fungalysin/Thermolysin Propeptide Motif K01400 - 3.4.24.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 336.0
SYD3_k127_7781943_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000007911 232.0
SYD3_k127_7781943_7 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.000000000000000000000000000000000000000000000000000000000001694 220.0
SYD3_k127_7781943_8 cellulose binding K09483 - 4.2.1.118 0.000000000000000000000000000000000000000000000000000001093 214.0
SYD3_k127_7781943_9 IMP dehydrogenase activity K04767,K07182 - - 0.0000000000000000000000000000000000000000000000001846 180.0
SYD3_k127_78243_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 3.627e-259 809.0
SYD3_k127_78243_1 SdrD B-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005313 298.0
SYD3_k127_78243_2 Large extracellular alpha-helical protein - - - 0.0000000000000000000000000000000000004117 164.0
SYD3_k127_78243_3 - - - - 0.00000000000000001698 91.0
SYD3_k127_7839452_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 579.0
SYD3_k127_7839452_1 COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00162 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 562.0
SYD3_k127_7839452_10 - - - - 0.0000000000000000008357 97.0
SYD3_k127_7839452_2 PFAM Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 514.0
SYD3_k127_7839452_3 COGs COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007185 470.0
SYD3_k127_7839452_4 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005186 467.0
SYD3_k127_7839452_5 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 385.0
SYD3_k127_7839452_6 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004212 379.0
SYD3_k127_7839452_7 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 342.0
SYD3_k127_7839452_8 Mur ligase middle domain K01924,K02558 - 6.3.2.45,6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000007026 262.0
SYD3_k127_7839452_9 metallopeptidase activity K01179,K03768,K08738 - 3.2.1.4,5.2.1.8 0.00000000000000000000005722 106.0
SYD3_k127_7842956_0 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000002482 216.0
SYD3_k127_7842956_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000009106 229.0
SYD3_k127_7842956_2 - - - - 0.00000000000000000000000000000000003211 141.0
SYD3_k127_7842956_3 STAS domain K03321 - - 0.000000000000000000000001906 105.0
SYD3_k127_7842956_4 alginic acid biosynthetic process - - - 0.0009361 51.0
SYD3_k127_7863452_0 esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005516 308.0
SYD3_k127_7863452_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004626 293.0
SYD3_k127_7863452_2 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001991 242.0
SYD3_k127_7863452_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion K07798 - - 0.0000000000000000000000000000000000000000000000000000000008078 217.0
SYD3_k127_7945064_0 Molybdopterin oxidoreductase K07812,K08352 - 1.7.2.3,1.8.5.5 0.0 1518.0
SYD3_k127_7945064_1 PFAM Glycoside hydrolase family 65, central catalytic K00691 - 2.4.1.8 3.952e-287 902.0
SYD3_k127_7945064_10 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008083 451.0
SYD3_k127_7945064_11 PFAM peptidase M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 439.0
SYD3_k127_7945064_12 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 385.0
SYD3_k127_7945064_13 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 382.0
SYD3_k127_7945064_14 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000859 337.0
SYD3_k127_7945064_15 Cell wall hydrolase autolysin K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004496 330.0
SYD3_k127_7945064_16 COG5337 Spore coat assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 323.0
SYD3_k127_7945064_17 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 312.0
SYD3_k127_7945064_18 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006409 307.0
SYD3_k127_7945064_19 integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008222 290.0
SYD3_k127_7945064_2 domain protein - - - 5.29e-234 732.0
SYD3_k127_7945064_20 Crp-like helix-turn-helix domain K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008203 274.0
SYD3_k127_7945064_21 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000003406 241.0
SYD3_k127_7945064_22 PFAM NUDIX hydrolase K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000003283 227.0
SYD3_k127_7945064_23 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000001691 221.0
SYD3_k127_7945064_24 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000002002 220.0
SYD3_k127_7945064_25 Haloacid dehalogenase-like hydrolase K01838 - 5.4.2.6 0.000000000000000000000000000000000000000000000000000001111 199.0
SYD3_k127_7945064_26 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.0000000000000000000000000000000000000000000000000000838 199.0
SYD3_k127_7945064_27 PFAM YeeE YedE family (DUF395) K07112 - - 0.0000000000000000000000000000000000000000000000000005252 186.0
SYD3_k127_7945064_28 PFAM Rhomboid family - - - 0.000000000000000000000000000000000000000000000000002224 189.0
SYD3_k127_7945064_29 - - - - 0.0000000000000000000000000000000000000000000144 175.0
SYD3_k127_7945064_3 Conserved repeat domain - - - 2.688e-231 754.0
SYD3_k127_7945064_30 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000001478 124.0
SYD3_k127_7945064_31 Biotin carboxylase K01961,K01965 - 6.3.4.14,6.4.1.2,6.4.1.3 0.00000000000000000000000001099 112.0
SYD3_k127_7945064_32 Protein of unknown function (DUF983) - - - 0.000000000000000000000002659 108.0
SYD3_k127_7945064_33 Protein of unknown function (DUF2652) - - - 0.00000000000000000004643 99.0
SYD3_k127_7945064_34 Protein of unknown function (DUF2892) - - - 0.000000000000000006325 85.0
SYD3_k127_7945064_35 BPTI/Kunitz family of serine protease inhibitors. - - - 0.0000000000000002013 83.0
SYD3_k127_7945064_36 PFAM Excinuclease ABC C subunit domain protein - - - 0.00000000000001334 76.0
SYD3_k127_7945064_37 - - - - 0.0000000001097 66.0
SYD3_k127_7945064_38 receptor - - - 0.000006884 49.0
SYD3_k127_7945064_4 4Fe-4S binding domain - - - 4.272e-216 683.0
SYD3_k127_7945064_40 YD repeat protein - - - 0.0007619 44.0
SYD3_k127_7945064_5 COG0659 Sulfate permease and related K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 553.0
SYD3_k127_7945064_6 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002837 518.0
SYD3_k127_7945064_7 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 514.0
SYD3_k127_7945064_8 Alpha amylase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 509.0
SYD3_k127_7945064_9 Organic solvent tolerance protein OstA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 453.0
SYD3_k127_8014203_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004071 544.0
SYD3_k127_8014203_1 Chaperone of endosialidase - - - 0.000000000000000000000000000000000000000000002386 183.0
SYD3_k127_8014203_2 response regulator K02477 - - 0.00000000000000001047 88.0
SYD3_k127_8014203_3 - - - - 0.00002855 51.0
SYD3_k127_8045477_0 Phenylacetic acid catabolic protein K02609 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007963 522.0
SYD3_k127_8045477_1 D-alanyl-D-alanine carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 294.0
SYD3_k127_8045477_2 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 289.0
SYD3_k127_8045477_3 Transcriptional regulator, TetR family - - - 0.000000000000000000000000000000000000000001367 162.0
SYD3_k127_8045477_4 Phenylacetic acid degradation B K02610 - - 0.00000000000000000000000000000000000000000634 155.0
SYD3_k127_8045477_5 Oxidoreductase FAD-binding domain K02613 - - 0.0000000003204 60.0
SYD3_k127_8074724_0 Cystathionine beta-synthase K01697 - 4.2.1.22 2.773e-222 696.0
SYD3_k127_8074724_1 Cysteine desulfurase K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004939 469.0
SYD3_k127_8074724_2 NADH dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 407.0
SYD3_k127_8074724_3 ATP synthesis coupled electron transport K12137,K15828 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 421.0
SYD3_k127_8074724_4 Proton-conducting membrane transporter K12141 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004649 263.0
SYD3_k127_8074724_5 Type IX secretion system membrane protein PorP/SprF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002858 265.0
SYD3_k127_8074724_6 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000003451 256.0
SYD3_k127_8074724_7 Phosphoglucosamine mutase K01840 - 5.4.2.8 0.00000000000000000000000000000000000000000000000000002047 192.0
SYD3_k127_8074724_8 Hydrogenase 4 membrane K12140 - - 0.00000000000000000000000000000000000004534 150.0
SYD3_k127_8074724_9 LysM domain K08307,K12204,K16291 - - 0.00000000000000000000000000006788 126.0
SYD3_k127_8184728_0 signal peptide peptidase SppA, 67K type K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 489.0
SYD3_k127_8184728_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006424 338.0
SYD3_k127_8184728_2 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000005839 204.0
SYD3_k127_8184728_3 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000888 169.0
SYD3_k127_8211811_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 9.444e-275 856.0
SYD3_k127_8211811_1 Peptidase family M1 domain K01256 - 3.4.11.2 2.85e-207 663.0
SYD3_k127_8211811_10 Domain of unknown function (DUF4835) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001233 268.0
SYD3_k127_8211811_11 outer membrane assembly lipoprotein YfiO K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007543 265.0
SYD3_k127_8211811_12 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000004056 216.0
SYD3_k127_8211811_13 RNA polymerase - - - 0.0000000000000000000000000000000000001149 144.0
SYD3_k127_8211811_14 - - - - 0.000000000000000000000000001837 123.0
SYD3_k127_8211811_15 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000001156 106.0
SYD3_k127_8211811_16 serine-type endopeptidase activity K04771 - 3.4.21.107 0.0000000000000000003707 98.0
SYD3_k127_8211811_2 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009019 598.0
SYD3_k127_8211811_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 482.0
SYD3_k127_8211811_4 Lamin Tail Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004781 499.0
SYD3_k127_8211811_5 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 453.0
SYD3_k127_8211811_6 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 440.0
SYD3_k127_8211811_7 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 367.0
SYD3_k127_8211811_8 nuclear chromosome segregation K02557,K18376 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 371.0
SYD3_k127_8211811_9 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000001012 271.0
SYD3_k127_8295784_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1239.0
SYD3_k127_8295784_1 Glycosyl hydrolase family 3 C-terminal domain K05349 - 3.2.1.21 2.207e-266 837.0
SYD3_k127_8295784_10 WD domain, G-beta repeat K12132 - 2.7.11.1 0.000000000000000000000000006797 127.0
SYD3_k127_8295784_11 Kelch repeat type 1 - - - 0.000000000000000000000002639 119.0
SYD3_k127_8295784_12 YtxH-like protein - - - 0.000000000000000000001282 97.0
SYD3_k127_8295784_13 - - - - 0.00000000000000000001232 95.0
SYD3_k127_8295784_14 - - - - 0.0000000000000002907 82.0
SYD3_k127_8295784_15 DNA recombination K03631,K06921,K20345 - - 0.000000000000007293 87.0
SYD3_k127_8295784_2 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 432.0
SYD3_k127_8295784_3 CHAT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008834 420.0
SYD3_k127_8295784_4 Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway K16329 - 4.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 396.0
SYD3_k127_8295784_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 326.0
SYD3_k127_8295784_6 Ndr family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002036 285.0
SYD3_k127_8295784_7 Leucine-rich repeat (LRR) protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000004394 239.0
SYD3_k127_8295784_8 hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000000000004522 179.0
SYD3_k127_8295784_9 - - - - 0.00000000000000000000000000000000000000000000005759 174.0
SYD3_k127_8308023_0 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006378 336.0
SYD3_k127_8308023_1 Adenylate cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000008426 262.0
SYD3_k127_8308023_2 Asparaginyl-tRNA synthetase K01893 - 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000007978 252.0
SYD3_k127_8308023_3 regulation of response to stimulus - - - 0.000004668 59.0
SYD3_k127_8329836_0 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004457 328.0
SYD3_k127_8329836_1 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000001588 155.0
SYD3_k127_8329836_2 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K02479 - - 0.000005002 50.0
SYD3_k127_835216_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1254.0
SYD3_k127_835216_1 glutaminyl-tRNA synthetase K01886 - 6.1.1.18 1.556e-250 783.0
SYD3_k127_835216_10 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000002406 231.0
SYD3_k127_835216_12 PFAM Phosphoribosyl-ATP pyrophosphohydrolase - - - 0.00000000000000000000000000000000000000000000000000000002982 200.0
SYD3_k127_835216_13 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000000000000000000000000000825 193.0
SYD3_k127_835216_14 PFAM N-6 DNA methylase K03427 - 2.1.1.72 0.0000000000000000000000000000000000000000000002755 170.0
SYD3_k127_835216_15 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000000002256 137.0
SYD3_k127_835216_16 Interferon-induced transmembrane protein - - - 0.0000000000000000000000000008672 114.0
SYD3_k127_835216_17 Protein of unknown function (DUF2752) - - - 0.000000000000000000000000115 112.0
SYD3_k127_835216_18 Helix-hairpin-helix motif - - - 0.00000000003083 65.0
SYD3_k127_835216_19 Protein of unknown function (DUF3822) - - - 0.0002387 52.0
SYD3_k127_835216_2 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 1.407e-228 724.0
SYD3_k127_835216_20 Leucine-rich repeat (LRR) protein - - - 0.0004928 54.0
SYD3_k127_835216_3 PFAM TRAP dicarboxylate transporter- DctP subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002847 479.0
SYD3_k127_835216_4 endonuclease I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 493.0
SYD3_k127_835216_5 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 430.0
SYD3_k127_835216_6 Peptidase S8 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007807 386.0
SYD3_k127_835216_7 PFAM Methyltransferase type 12 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001327 258.0
SYD3_k127_835216_8 RNA methyltransferase, RsmD K08316 - 2.1.1.171 0.0000000000000000000000000000000000000000000000000000000000000000001163 234.0
SYD3_k127_835216_9 Domain of unknown function (DUF697) - - - 0.00000000000000000000000000000000000000000000000000000000000000003209 230.0
SYD3_k127_8386545_0 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007332 417.0
SYD3_k127_8386545_1 PFAM von Willebrand factor type A domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004362 255.0
SYD3_k127_8387778_0 TIGRFAM Acidobacterial duplicated orphan permease K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 435.0
SYD3_k127_8387778_1 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 299.0
SYD3_k127_8427560_0 TonB dependent receptor K02014 - - 0.0 1253.0
SYD3_k127_8427560_1 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 6.09e-268 849.0
SYD3_k127_8427560_10 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 382.0
SYD3_k127_8427560_11 Chaperone of endosialidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 393.0
SYD3_k127_8427560_12 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008339 353.0
SYD3_k127_8427560_13 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 332.0
SYD3_k127_8427560_14 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006657 302.0
SYD3_k127_8427560_15 cellulase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003063 284.0
SYD3_k127_8427560_16 PFAM Phosphatidic acid phosphatase type 2 haloperoxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002208 269.0
SYD3_k127_8427560_17 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000002832 224.0
SYD3_k127_8427560_18 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000001777 214.0
SYD3_k127_8427560_19 - - - - 0.0000000000000000000000000000000000000000000000001219 184.0
SYD3_k127_8427560_2 Serine carboxypeptidase - - - 4.058e-240 753.0
SYD3_k127_8427560_20 Protein of unknown function, DUF481 - - - 0.0000000000000000000000000000000000000000000000005258 184.0
SYD3_k127_8427560_21 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000005387 192.0
SYD3_k127_8427560_22 PFAM Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000008561 177.0
SYD3_k127_8427560_24 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000003805 164.0
SYD3_k127_8427560_25 PFAM Archaeal ATPase K06921 - - 0.00000000000000000000000000000000000000002564 156.0
SYD3_k127_8427560_26 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000333 175.0
SYD3_k127_8427560_27 Protein chain release factor B K15034 - - 0.00000000000000000000000000000000002834 139.0
SYD3_k127_8427560_28 LuxR family transcriptional regulator - - - 0.0000000000000000000000000000003324 127.0
SYD3_k127_8427560_29 Hep Hag repeat protein - - - 0.000000000000000000000000000001135 139.0
SYD3_k127_8427560_3 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 605.0
SYD3_k127_8427560_30 PFAM outer membrane chaperone Skp (OmpH) K06142 - - 0.00000000000000000000000001546 115.0
SYD3_k127_8427560_31 Protein of unknown function (DUF2652) - - - 0.0000000000000000000000003724 114.0
SYD3_k127_8427560_32 Divergent 4Fe-4S mono-cluster - - - 0.0000000000000000000000004086 107.0
SYD3_k127_8427560_33 Domain of unknown function (DUF4286) - - - 0.000000000000000000000001148 108.0
SYD3_k127_8427560_35 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.00000000000000000007091 98.0
SYD3_k127_8427560_36 Protein of unknown function (DUF4199) - - - 0.000000000000000002506 91.0
SYD3_k127_8427560_37 Proteolipid membrane potential modulator - - - 0.000000000000000562 84.0
SYD3_k127_8427560_38 Outer membrane protein beta-barrel domain - - - 0.00000000000008432 80.0
SYD3_k127_8427560_39 Hep Hag repeat protein - - - 0.000000000004613 80.0
SYD3_k127_8427560_4 TonB-dependent Receptor Plug K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003938 563.0
SYD3_k127_8427560_5 Thiol-activated cytolysin K11031 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 492.0
SYD3_k127_8427560_6 ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003114 432.0
SYD3_k127_8427560_7 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006318 405.0
SYD3_k127_8427560_8 ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008596 401.0
SYD3_k127_8427560_9 OST-HTH/LOTUS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 379.0
SYD3_k127_8470951_0 histidine kinase-, DNA gyrase B - - - 0.0 1287.0
SYD3_k127_8470951_1 Major facilitator Superfamily K16211 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 538.0
SYD3_k127_8470951_2 cellulase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003175 433.0
SYD3_k127_8470951_3 - - - - 0.000000000000000000000000000000000000000000000004152 179.0
SYD3_k127_8470951_4 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000744 136.0
SYD3_k127_8470951_5 Thioredoxin-like - - - 0.000000000000000000000000000000005707 134.0
SYD3_k127_8470951_6 OmpA family - - - 0.0000000000000000000000002932 112.0
SYD3_k127_8470951_7 metallopeptidase activity - - - 0.000000000218 70.0
SYD3_k127_8470951_8 Hep Hag repeat protein - - - 0.00000006188 65.0
SYD3_k127_8470951_9 BNR Asp-box repeat K01186 - 3.2.1.18 0.0001794 57.0
SYD3_k127_8486456_0 Polysaccharide lyase family 8, super-sandwich domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008661 503.0
SYD3_k127_8486456_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000007128 219.0
SYD3_k127_8486456_2 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000787 180.0
SYD3_k127_8486456_3 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000001622 191.0
SYD3_k127_8546898_0 surface antigen - - - 0.000000000000000000000007121 112.0
SYD3_k127_8546898_1 Fibronectin type 3 domain K01179,K06882 - 3.2.1.4 0.0000055 59.0
SYD3_k127_8546898_2 Carboxypeptidase regulatory-like domain - - - 0.00005043 58.0
SYD3_k127_855206_0 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000003517 216.0
SYD3_k127_855206_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000003885 216.0
SYD3_k127_855206_2 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.000000000000000000000000000000000000000001967 158.0
SYD3_k127_855206_3 - - - - 0.00000000000000000008609 94.0
SYD3_k127_8561583_0 PFAM TonB-dependent Receptor Plug - - - 1.162e-300 943.0
SYD3_k127_8561583_1 ABC transporter K15738 - - 1.858e-197 635.0
SYD3_k127_8561583_10 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.00000000000000000000000000001359 123.0
SYD3_k127_8561583_11 Translation initiation factor K03113 - - 0.000000000000000001117 90.0
SYD3_k127_8561583_12 Chaperone of endosialidase - - - 0.00000000000001621 87.0
SYD3_k127_8561583_2 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 479.0
SYD3_k127_8561583_3 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 456.0
SYD3_k127_8561583_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002617 233.0
SYD3_k127_8561583_5 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.000000000000000000000000000000000000000000000000000000000001927 212.0
SYD3_k127_8561583_6 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000005696 216.0
SYD3_k127_8561583_7 ABC transporter K15738 - - 0.00000000000000000000000000000000000000000000002026 176.0
SYD3_k127_8561583_8 Beta-lactamase - - - 0.000000000000000000000000000000007744 141.0
SYD3_k127_8561583_9 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000006176 130.0
SYD3_k127_8567674_0 heavy metal translocating P-type ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 1.295e-317 992.0
SYD3_k127_8567674_1 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004376 340.0
SYD3_k127_8567674_2 Helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006494 254.0
SYD3_k127_8596306_0 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 391.0
SYD3_k127_8596306_1 methylmalonyl-CoA mutase N-terminal domain K01847 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 301.0
SYD3_k127_8596306_2 Methyltransferase domain K00588 - 2.1.1.104 0.000000000000000000000000000000000000000000002593 168.0
SYD3_k127_8613888_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1467.0
SYD3_k127_8613888_1 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009918 567.0
SYD3_k127_8613888_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006315 315.0
SYD3_k127_8613888_11 FRG - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 308.0
SYD3_k127_8613888_12 Belongs to the acetyltransferase family. ArgA subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006596 307.0
SYD3_k127_8613888_13 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 288.0
SYD3_k127_8613888_14 Thioesterase superfamily K02614 - - 0.0000000000000000000000000000000000000000000000006546 178.0
SYD3_k127_8613888_16 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000006995 109.0
SYD3_k127_8613888_17 ThiS family - - - 0.00000000000000000000000249 104.0
SYD3_k127_8613888_18 - - - - 0.00000000000001436 81.0
SYD3_k127_8613888_2 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004478 480.0
SYD3_k127_8613888_3 Belongs to the SEDS family K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005758 383.0
SYD3_k127_8613888_4 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008328 362.0
SYD3_k127_8613888_5 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 359.0
SYD3_k127_8613888_6 dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003767 325.0
SYD3_k127_8613888_7 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003408 319.0
SYD3_k127_8613888_8 Oxygen tolerance - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007629 332.0
SYD3_k127_8613888_9 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 309.0
SYD3_k127_8627075_0 Proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 6.723e-273 852.0
SYD3_k127_8627075_1 Amidohydrolase family - - - 9.186e-229 720.0
SYD3_k127_8627075_10 Chaperone of endosialidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001712 260.0
SYD3_k127_8627075_11 PFAM histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000003135 208.0
SYD3_k127_8627075_12 negative regulation of canonical Wnt signaling pathway involved in osteoblast differentiation K06252 GO:0000902,GO:0000904,GO:0001503,GO:0001649,GO:0001764,GO:0002076,GO:0003674,GO:0005102,GO:0005178,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005623,GO:0006928,GO:0007155,GO:0007160,GO:0007275,GO:0007399,GO:0007409,GO:0008037,GO:0008038,GO:0008150,GO:0008285,GO:0009653,GO:0009966,GO:0009968,GO:0009986,GO:0009987,GO:0010646,GO:0010648,GO:0010721,GO:0016043,GO:0016049,GO:0016477,GO:0022008,GO:0022610,GO:0023051,GO:0023057,GO:0030030,GO:0030111,GO:0030154,GO:0030178,GO:0030182,GO:0030278,GO:0030279,GO:0030334,GO:0030336,GO:0030424,GO:0030425,GO:0031012,GO:0031175,GO:0031589,GO:0032501,GO:0032502,GO:0032879,GO:0032989,GO:0032990,GO:0033267,GO:0033688,GO:0033689,GO:0036477,GO:0040007,GO:0040011,GO:0040012,GO:0040013,GO:0042127,GO:0042802,GO:0042995,GO:0043005,GO:0043025,GO:0043195,GO:0043679,GO:0044297,GO:0044302,GO:0044306,GO:0044421,GO:0044456,GO:0044463,GO:0044464,GO:0044877,GO:0045202,GO:0045595,GO:0045596,GO:0045667,GO:0045668,GO:0048468,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048588,GO:0048589,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050767,GO:0050768,GO:0050789,GO:0050793,GO:0050794,GO:0050839,GO:0051093,GO:0051179,GO:0051239,GO:0051241,GO:0051270,GO:0051271,GO:0051674,GO:0051960,GO:0051961,GO:0060284,GO:0060560,GO:0060828,GO:0061564,GO:0065007,GO:0070593,GO:0071840,GO:0090090,GO:0097442,GO:0097447,GO:0097457,GO:0097458,GO:0098793,GO:0120025,GO:0120036,GO:0120038,GO:0120039,GO:0150034,GO:1905239,GO:1905240,GO:1990026,GO:1990138,GO:2000026,GO:2000145,GO:2000146,GO:2001222,GO:2001223 - 0.000000000000000000000000000000000000000000000000000000003207 228.0
SYD3_k127_8627075_13 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000006342 197.0
SYD3_k127_8627075_14 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000002584 194.0
SYD3_k127_8627075_15 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000002303 185.0
SYD3_k127_8627075_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.00000000000000000000000000000000000000000001216 166.0
SYD3_k127_8627075_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000000000000000000006232 158.0
SYD3_k127_8627075_18 - - - - 0.0000000000000000000000000000000000000004888 151.0
SYD3_k127_8627075_19 - - - - 0.00000000000007472 81.0
SYD3_k127_8627075_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 4.834e-210 657.0
SYD3_k127_8627075_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002483 601.0
SYD3_k127_8627075_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003433 572.0
SYD3_k127_8627075_5 NADH dehydrogenase K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005959 544.0
SYD3_k127_8627075_6 Glycoside hydrolase family 16 K01216 - 3.2.1.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 349.0
SYD3_k127_8627075_7 AP endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 318.0
SYD3_k127_8627075_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 312.0
SYD3_k127_8627075_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002606 275.0
SYD3_k127_8684440_0 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006148 263.0
SYD3_k127_8684440_1 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000002727 177.0
SYD3_k127_8684440_2 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000008526 173.0
SYD3_k127_8684440_3 WbqC-like protein family - - - 0.000000000000000000000000000000000003427 147.0
SYD3_k127_8684440_4 Sulfotransferase domain - - - 0.000000000000000000000000000004371 126.0
SYD3_k127_8684440_5 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000003126 122.0
SYD3_k127_8684440_7 D-glucuronyl C5-epimerase C-terminus - - - 0.000000000000000002008 96.0
SYD3_k127_8684440_8 Glycosyltransferase Family 4 - - - 0.0000001764 57.0
SYD3_k127_8700569_0 DNA polymerase Ligase (LigD) - - - 5.475e-257 812.0
SYD3_k127_8700569_1 Superfamily I DNA and RNA K10742 - 3.6.4.12 5.429e-252 816.0
SYD3_k127_8700569_10 Domain of unknown function (DUF4129) - - - 0.0000000000000003116 89.0
SYD3_k127_8700569_11 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin - - - 0.0000000000000004164 89.0
SYD3_k127_8700569_2 PFAM amino acid permease-associated region K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 384.0
SYD3_k127_8700569_3 PDZ DHR GLGF domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 329.0
SYD3_k127_8700569_4 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 317.0
SYD3_k127_8700569_5 PFAM Integral membrane protein DUF95 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002435 278.0
SYD3_k127_8700569_6 - - - - 0.000000000000000000000000000000000000000000000000000001541 207.0
SYD3_k127_8700569_7 RDD family - - - 0.00000000000000000000000000000000000000000004142 169.0
SYD3_k127_8700569_8 Bacterial protein of unknown function (DUF937) - - - 0.0000000000000000000000000211 118.0
SYD3_k127_8709940_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 2.043e-231 739.0
SYD3_k127_8709940_1 Cation transport protein K03498 - - 2.794e-231 725.0
SYD3_k127_8709940_10 WD40-like Beta Propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 375.0
SYD3_k127_8709940_11 DNA recombination K03631,K06921,K20345 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 386.0
SYD3_k127_8709940_12 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 362.0
SYD3_k127_8709940_13 Phenazine biosynthesis-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 324.0
SYD3_k127_8709940_14 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 315.0
SYD3_k127_8709940_15 Domain of unknown function (DUF5103) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004734 321.0
SYD3_k127_8709940_16 Putative NAD(P)-binding K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 297.0
SYD3_k127_8709940_17 thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 289.0
SYD3_k127_8709940_18 outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001168 294.0
SYD3_k127_8709940_19 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000002998 246.0
SYD3_k127_8709940_2 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 2.346e-222 700.0
SYD3_k127_8709940_20 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000004881 239.0
SYD3_k127_8709940_21 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000001674 223.0
SYD3_k127_8709940_22 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000000000000000000000000000000000000399 214.0
SYD3_k127_8709940_23 Belongs to the UPF0403 family - - - 0.000000000000000000000000000000000000000000000000000000000085 208.0
SYD3_k127_8709940_24 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000002778 207.0
SYD3_k127_8709940_25 - - - - 0.00000000000000000000000000000000000000000000000000002117 196.0
SYD3_k127_8709940_26 - - - - 0.00000000000000000000000000000000000000000000000001079 187.0
SYD3_k127_8709940_27 - - - - 0.00000000000000000000000000000000000000000000000001198 185.0
SYD3_k127_8709940_28 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.0000000000000000000000000000000000000000000225 168.0
SYD3_k127_8709940_29 synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000001382 153.0
SYD3_k127_8709940_3 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 1.51e-218 689.0
SYD3_k127_8709940_30 Uncharacterized ACR, COG1993 K09137 - - 0.0000000000000000000000000000000000001253 144.0
SYD3_k127_8709940_31 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000003111 143.0
SYD3_k127_8709940_32 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.0000000000000000000000000000005068 126.0
SYD3_k127_8709940_33 COG COG0724 RNA-binding proteins (RRM domain) - - - 0.0000000000000000000000000002806 117.0
SYD3_k127_8709940_34 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.00000000000000000000000001446 111.0
SYD3_k127_8709940_35 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000003583 114.0
SYD3_k127_8709940_37 Protein of unknown function (DUF1761) - - - 0.000000000000000000114 93.0
SYD3_k127_8709940_38 Glycosyl transferases group 1 - - - 0.0000000000000001976 91.0
SYD3_k127_8709940_4 Peptidase dimerisation domain K12941 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 612.0
SYD3_k127_8709940_5 peptidase M1 K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005358 612.0
SYD3_k127_8709940_6 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 568.0
SYD3_k127_8709940_7 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004769 484.0
SYD3_k127_8709940_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008084 441.0
SYD3_k127_8709940_9 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07646 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000443 378.0
SYD3_k127_8779699_0 major facilitator superfamily K08151 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003571 584.0
SYD3_k127_8779699_1 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 446.0
SYD3_k127_8779699_10 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000008481 166.0
SYD3_k127_8779699_2 Cytochrome P450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002693 409.0
SYD3_k127_8779699_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003594 396.0
SYD3_k127_8779699_4 Fungalysin/Thermolysin Propeptide Motif K01400 - 3.4.24.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 404.0
SYD3_k127_8779699_5 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 379.0
SYD3_k127_8779699_6 Short-chain dehydrogenase reductase SDR K13774 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008092 356.0
SYD3_k127_8779699_7 PFAM Endonuclease Exonuclease phosphatase K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 340.0
SYD3_k127_8779699_8 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006 314.0
SYD3_k127_8779699_9 Conserved hypothetical protein (DUF2461) - - - 0.00000000000000000000000000000000000000000000000000000006765 202.0
SYD3_k127_8824101_0 TIGRFAM formate dehydrogenase, alpha subunit, archaeal-type K00123,K18332 - 1.12.1.3,1.17.1.9 0.0 1411.0
SYD3_k127_8824101_1 competence protein COMEC - - - 0.00000000000000000000000000001265 124.0
SYD3_k127_8824101_3 Transposase - - - 0.00000000000000004358 84.0
SYD3_k127_8824101_4 Transposase IS200 like - - - 0.00000000000006797 76.0
SYD3_k127_8831213_0 ABC transporter K11085 - - 2.177e-202 646.0
SYD3_k127_8831213_1 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 1.286e-198 657.0
SYD3_k127_8831213_2 Psort location OuterMembrane, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 523.0
SYD3_k127_8831213_3 glutamine synthetase K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004768 436.0
SYD3_k127_8831213_4 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004504 409.0
SYD3_k127_8831213_5 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009118 411.0
SYD3_k127_8831213_6 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 359.0
SYD3_k127_8831213_7 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000001287 253.0
SYD3_k127_8831213_8 (GNAT) family K22441 - 2.3.1.57 0.00000000000000000000000000000000000001704 151.0
SYD3_k127_8842866_0 Belongs to the xylose isomerase family K01805 - 5.3.1.5 4.526e-217 681.0
SYD3_k127_8842866_1 PFAM FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 1.162e-196 625.0
SYD3_k127_8842866_2 Cellulase N-terminal ig-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 611.0
SYD3_k127_8842866_3 PFAM Glycoside hydrolase, family 37 K01194 - 3.2.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 539.0
SYD3_k127_8842866_4 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002422 494.0
SYD3_k127_8842866_5 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001037 254.0
SYD3_k127_8842866_6 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.0000000000000000000000000000000000000000000000000000000000000000006332 233.0
SYD3_k127_8842866_7 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000007724 258.0
SYD3_k127_8842866_8 Protein of unknown function (DUF2652) - - - 0.00000000000000000000000000000000000000000000000000001179 202.0
SYD3_k127_8842866_9 proteolysis K02441 - - 0.000000000000000000000000000000000000000000000000003344 187.0
SYD3_k127_8866117_0 Nitrous oxide reductase K00376 - 1.7.2.4 0.0 1077.0
SYD3_k127_8866117_1 Membrane protein involved in D-alanine export - - - 6.476e-218 684.0
SYD3_k127_8866117_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 305.0
SYD3_k127_8866117_11 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 301.0
SYD3_k127_8866117_12 mevalonate kinase activity K00869,K00938 - 2.7.1.36,2.7.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007518 280.0
SYD3_k127_8866117_13 AAA domain, putative AbiEii toxin, Type IV TA system K19340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002181 275.0
SYD3_k127_8866117_14 lipoprotein involved in nitrous oxide reduction K19342 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001546 270.0
SYD3_k127_8866117_15 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.0000000000000000000000000000000000000000000000000000000000000000001492 242.0
SYD3_k127_8866117_16 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000002246 239.0
SYD3_k127_8866117_17 bifunctional deaminase-reductase domain protein K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000003429 232.0
SYD3_k127_8866117_18 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000006745 209.0
SYD3_k127_8866117_19 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000001513 225.0
SYD3_k127_8866117_2 ligase activity - - - 9.88e-204 644.0
SYD3_k127_8866117_20 chlorophyll binding K03640 - - 0.00000000000000000000000000000000000000000000000000005139 209.0
SYD3_k127_8866117_21 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000003837 205.0
SYD3_k127_8866117_22 COG2335 Secreted and surface protein containing fasciclin-like repeats - - - 0.00000000000000000000000000000000000000000000002959 175.0
SYD3_k127_8866117_23 Glyoxalase-like domain K07032 - - 0.0000000000000000000000000000000000000000000004132 170.0
SYD3_k127_8866117_24 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000008072 168.0
SYD3_k127_8866117_25 PFAM NosL K19342 - - 0.000000000000000000000000000000000001161 144.0
SYD3_k127_8866117_26 DoxX-like family - - - 0.00000000000000000000000000000005046 128.0
SYD3_k127_8866117_27 - - - - 0.0000000000000000000000000000001949 128.0
SYD3_k127_8866117_29 ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - 0.0000009516 62.0
SYD3_k127_8866117_3 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008352 529.0
SYD3_k127_8866117_4 Domain present in carbohydrate binding proteins and sugar hydrolses K07218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 469.0
SYD3_k127_8866117_5 SprB repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004748 474.0
SYD3_k127_8866117_6 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid K01823 - 5.3.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 388.0
SYD3_k127_8866117_7 nitrous oxide K19341 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 321.0
SYD3_k127_8866117_8 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008017 335.0
SYD3_k127_8866117_9 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005733 309.0
SYD3_k127_8877704_0 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 585.0
SYD3_k127_8877704_1 PA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 585.0
SYD3_k127_8877704_2 Glycosyl transferase, family 9 K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 363.0
SYD3_k127_8877704_3 PFAM GH3 auxin-responsive promoter - - - 0.000000000000000000000000000000000000002577 150.0
SYD3_k127_8877704_4 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019144,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0047631,GO:0050896 3.6.1.13 0.000000000000000004605 89.0
SYD3_k127_8880996_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1153.0
SYD3_k127_8880996_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1020.0
SYD3_k127_8880996_10 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 6.845e-199 627.0
SYD3_k127_8880996_11 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007269 592.0
SYD3_k127_8880996_12 IMG reference gene - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008266 641.0
SYD3_k127_8880996_13 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 565.0
SYD3_k127_8880996_14 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 520.0
SYD3_k127_8880996_15 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007708 525.0
SYD3_k127_8880996_16 domain, Protein K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 527.0
SYD3_k127_8880996_17 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005148 479.0
SYD3_k127_8880996_18 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 523.0
SYD3_k127_8880996_19 amidohydrolase K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 478.0
SYD3_k127_8880996_2 PFAM ASPIC and UnbV - - - 2.826e-302 961.0
SYD3_k127_8880996_20 domain, Protein K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006726 508.0
SYD3_k127_8880996_21 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 460.0
SYD3_k127_8880996_22 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 448.0
SYD3_k127_8880996_23 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 421.0
SYD3_k127_8880996_24 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008164 416.0
SYD3_k127_8880996_25 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 412.0
SYD3_k127_8880996_26 PFAM PKD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003108 454.0
SYD3_k127_8880996_27 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 393.0
SYD3_k127_8880996_28 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005456 398.0
SYD3_k127_8880996_29 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 366.0
SYD3_k127_8880996_3 Peptidase family C25 - - - 1.732e-275 885.0
SYD3_k127_8880996_30 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 362.0
SYD3_k127_8880996_31 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006007 367.0
SYD3_k127_8880996_32 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 391.0
SYD3_k127_8880996_33 OmpA MotB domain protein K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006491 365.0
SYD3_k127_8880996_34 Methionine aminopeptidase K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 340.0
SYD3_k127_8880996_35 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000593 324.0
SYD3_k127_8880996_36 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004431 327.0
SYD3_k127_8880996_37 PFAM NAD dependent epimerase dehydratase family K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 325.0
SYD3_k127_8880996_38 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 309.0
SYD3_k127_8880996_39 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 306.0
SYD3_k127_8880996_4 gliding motility-associated lipoprotein GldJ - - - 1.456e-222 700.0
SYD3_k127_8880996_40 COGs COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004175 322.0
SYD3_k127_8880996_41 PFAM Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 311.0
SYD3_k127_8880996_42 Type IX secretion system membrane protein PorP/SprF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006534 300.0
SYD3_k127_8880996_43 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004252 281.0
SYD3_k127_8880996_44 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004729 283.0
SYD3_k127_8880996_45 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000001516 274.0
SYD3_k127_8880996_46 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001254 256.0
SYD3_k127_8880996_47 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001619 269.0
SYD3_k127_8880996_48 FG-GAP repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005633 279.0
SYD3_k127_8880996_49 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000004004 244.0
SYD3_k127_8880996_5 Amidohydrolase family - - - 1.458e-212 676.0
SYD3_k127_8880996_50 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000008556 244.0
SYD3_k127_8880996_51 Forms part of the polypeptide exit tunnel K02926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000581 239.0
SYD3_k127_8880996_52 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000005898 237.0
SYD3_k127_8880996_53 IMG reference gene - - - 0.00000000000000000000000000000000000000000000000000000000000000000004325 267.0
SYD3_k127_8880996_54 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000002803 221.0
SYD3_k127_8880996_55 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000008454 220.0
SYD3_k127_8880996_56 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000001179 219.0
SYD3_k127_8880996_57 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000003524 199.0
SYD3_k127_8880996_58 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000001438 197.0
SYD3_k127_8880996_59 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000008576 194.0
SYD3_k127_8880996_6 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 4.302e-209 659.0
SYD3_k127_8880996_60 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000003039 190.0
SYD3_k127_8880996_61 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000003434 189.0
SYD3_k127_8880996_62 ABC transporter K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000537 190.0
SYD3_k127_8880996_63 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000006279 181.0
SYD3_k127_8880996_64 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000000000000000000000004996 183.0
SYD3_k127_8880996_65 - - - - 0.00000000000000000000000000000000000000000000002065 181.0
SYD3_k127_8880996_66 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000851 169.0
SYD3_k127_8880996_67 Belongs to the arginase family K01479 - 3.5.3.8 0.00000000000000000000000000000000000000000001421 175.0
SYD3_k127_8880996_68 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000004297 155.0
SYD3_k127_8880996_69 - - - - 0.00000000000000000000000000000000000000001769 157.0
SYD3_k127_8880996_7 SPTR CHU large protein - - - 1.594e-206 714.0
SYD3_k127_8880996_70 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000916 150.0
SYD3_k127_8880996_71 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000006682 146.0
SYD3_k127_8880996_72 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000001258 145.0
SYD3_k127_8880996_73 Acetyltransferase (GNAT) domain K00657 - 2.3.1.57 0.00000000000000000000000000000000000002878 148.0
SYD3_k127_8880996_74 Protein of unknown function (DUF3667) - - - 0.0000000000000000000000000000000000002021 154.0
SYD3_k127_8880996_75 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.00000000000000000000000000000000001095 136.0
SYD3_k127_8880996_76 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000003237 134.0
SYD3_k127_8880996_77 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000199 130.0
SYD3_k127_8880996_78 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000000004812 121.0
SYD3_k127_8880996_79 transcriptional regulator - - - 0.00000000000000000000000000007188 119.0
SYD3_k127_8880996_8 Bacterial sugar transferase - - - 2.153e-200 634.0
SYD3_k127_8880996_80 CUB and sushi K17495 - - 0.000000000000000000000000001061 133.0
SYD3_k127_8880996_81 Belongs to the universal ribosomal protein uL29 family K02904 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000001596 102.0
SYD3_k127_8880996_82 IMG reference gene - - - 0.00000000000000000000007825 105.0
SYD3_k127_8880996_83 Putative porin - - - 0.000000000000000004768 99.0
SYD3_k127_8880996_85 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000004291 76.0
SYD3_k127_8880996_86 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000000003301 73.0
SYD3_k127_8880996_87 Septum formation initiator - - - 0.0000000000007908 73.0
SYD3_k127_8880996_88 GIY-YIG catalytic domain protein K07461 - - 0.0000000878 56.0
SYD3_k127_8880996_9 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 5.97e-200 631.0
SYD3_k127_8880996_90 PFAM conserved - - - 0.000003394 49.0
SYD3_k127_8882840_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0 1044.0
SYD3_k127_8882840_1 Kelch repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 324.0
SYD3_k127_8882840_2 Lysin motif - - - 0.0000000000000000000000004128 104.0
SYD3_k127_8882840_3 regulation of response to stimulus K01126,K21449 - 3.1.4.46 0.00000000000000000000004257 115.0
SYD3_k127_8907697_0 COG1228 Imidazolonepropionase and related K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 497.0
SYD3_k127_8907697_1 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 385.0
SYD3_k127_8907697_2 SPTR CHU large protein - - - 0.000000000000000000000000000000000000000000000000000001263 216.0
SYD3_k127_8907697_3 Protein of unknown function, DUF255 - - - 0.0001117 54.0
SYD3_k127_8929036_0 Peptidase, S9A B C family, catalytic domain protein - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044464,GO:0046983,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 2.51e-255 806.0
SYD3_k127_8929036_1 Belongs to the glycosyl hydrolase 2 family K01190 - 3.2.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 459.0
SYD3_k127_8929036_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000008812 67.0
SYD3_k127_8954274_0 Fructose-1-6-bisphosphatase, N-terminal domain K03841 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 557.0
SYD3_k127_8954274_1 ABC transporter K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 449.0
SYD3_k127_8954274_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000000000000000000000000000000000000000000000000000000000000001993 226.0
SYD3_k127_8954274_3 PFAM NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000002621 168.0
SYD3_k127_89960_0 Cation transporter/ATPase, N-terminus K01535 - 3.6.3.6 0.000000000000000000000000000000000000000000000000000000000000000000005724 256.0
SYD3_k127_89960_1 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01531 - 3.6.3.2 0.0000000000000000000000000000000000000006878 156.0
SYD3_k127_89960_2 Pyridoxal-phosphate dependent enzyme - - - 0.00000000000000000000000000000001519 127.0
SYD3_k127_89960_3 - - - - 0.000002494 52.0
SYD3_k127_89960_4 Belongs to the peptidase S8 family K12287,K12516,K20276 - - 0.0005152 51.0
SYD3_k127_9020510_0 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0 1120.0
SYD3_k127_9020510_1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K01585 - 4.1.1.19 2.429e-246 767.0
SYD3_k127_9020510_10 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 466.0
SYD3_k127_9020510_12 Belongs to the arginase family K01480 - 3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 370.0
SYD3_k127_9020510_13 Serine protease, subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009193 347.0
SYD3_k127_9020510_14 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 314.0
SYD3_k127_9020510_15 Phenazine biosynthesis-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000103 265.0
SYD3_k127_9020510_16 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000138 252.0
SYD3_k127_9020510_17 Transposase - - - 0.00000000000000000000000000000000000000000000000000000000000001997 228.0
SYD3_k127_9020510_18 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000009373 228.0
SYD3_k127_9020510_19 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000006342 197.0
SYD3_k127_9020510_2 Sigma-54 interaction domain K03405 - 6.6.1.1 1.557e-218 688.0
SYD3_k127_9020510_20 Etoposide-induced protein 2.4 (EI24) K06203 - - 0.0000000000000000000000000000000000000000000000000011 192.0
SYD3_k127_9020510_21 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000186 193.0
SYD3_k127_9020510_22 SURF4 family K15977 - - 0.0000000000000000000000000000000000001269 148.0
SYD3_k127_9020510_23 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000000000000001481 160.0
SYD3_k127_9020510_24 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000001414 127.0
SYD3_k127_9020510_25 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000000000000000000000005224 119.0
SYD3_k127_9020510_26 PFAM Transposase IS200 like - - - 0.000000000000000000008964 94.0
SYD3_k127_9020510_28 - - - - 0.000001062 55.0
SYD3_k127_9020510_29 sporulation - - - 0.0001347 54.0
SYD3_k127_9020510_3 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 584.0
SYD3_k127_9020510_4 FAD-dependent dehydrogenase K07137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 584.0
SYD3_k127_9020510_5 Deoxyhypusine synthase K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005589 557.0
SYD3_k127_9020510_6 von Willebrand factor, type A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 542.0
SYD3_k127_9020510_7 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005716 534.0
SYD3_k127_9020510_8 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 522.0
SYD3_k127_9020510_9 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007594 481.0
SYD3_k127_9113592_0 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 478.0
SYD3_k127_9113592_1 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 386.0
SYD3_k127_9113592_2 chlorophyll binding K21218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001845 284.0
SYD3_k127_9130398_0 Glycosyl hydrolase family 65 central catalytic domain - - - 4.248e-283 880.0
SYD3_k127_9130398_1 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004462 314.0
SYD3_k127_9167897_0 Tryptophan 2,3-dioxygenase K00453 - 1.13.11.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 423.0
SYD3_k127_9167897_1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile K01241 - 3.2.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 414.0
SYD3_k127_9167897_2 PFAM EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007672 364.0
SYD3_k127_9167897_3 short-chain dehydrogenase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004056 287.0
SYD3_k127_9167897_4 oxidation-reduction process K01617,K15067 - 3.5.99.5,4.1.1.77 0.0000000000000000000000000000000000000000000000000000000000007477 213.0
SYD3_k127_9167897_5 Belongs to the aldehyde dehydrogenase family K00128,K10217 - 1.2.1.3,1.2.1.32,1.2.1.85 0.00000000000000000000000000000000000000000000000000004041 190.0
SYD3_k127_9171973_0 RQC K03654 - 3.6.4.12 3.659e-201 650.0
SYD3_k127_9171973_1 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 594.0
SYD3_k127_9171973_10 YCII-related domain - - - 0.0000000000000000005672 90.0
SYD3_k127_9171973_11 SnoaL-like domain - - - 0.00000000002191 74.0
SYD3_k127_9171973_12 DNA-binding transcription factor activity - - - 0.0004054 48.0
SYD3_k127_9171973_2 ADP-glyceromanno-heptose 6-epimerase activity K02377 - 1.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 541.0
SYD3_k127_9171973_3 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009793 544.0
SYD3_k127_9171973_4 5'-nucleotidase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006974 511.0
SYD3_k127_9171973_5 Participates in initiation and elongation during chromosome replication - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005601 453.0
SYD3_k127_9171973_6 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005379 423.0
SYD3_k127_9171973_7 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000002964 227.0
SYD3_k127_9171973_8 2'-5' RNA ligase - - - 0.00000000000000000000000000000005799 131.0
SYD3_k127_9171973_9 Transcriptional regulator - - - 0.00000000000000000000000007706 122.0
SYD3_k127_9202581_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006003 534.0
SYD3_k127_9202581_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006388 531.0
SYD3_k127_9202581_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 432.0
SYD3_k127_9202581_3 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006772 428.0
SYD3_k127_9202581_4 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004579 419.0
SYD3_k127_9202581_5 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006004 407.0
SYD3_k127_9202581_6 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000001328 234.0
SYD3_k127_9202581_7 Cell division protein K03589 - - 0.0000000000000000000000000000000000000001895 159.0
SYD3_k127_9202581_8 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000263 112.0
SYD3_k127_9202581_9 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000439 46.0
SYD3_k127_9322872_0 Arylsulfotransferase (ASST) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008484 580.0
SYD3_k127_9322872_1 Arylsulfotransferase (ASST) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005737 406.0
SYD3_k127_9322872_2 Fe-S oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008521 380.0
SYD3_k127_9322872_3 Dihydrodipicolinate reductase, N-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009182 346.0
SYD3_k127_9322872_4 Orotidine 5''-phosphate decarboxylase K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009163 316.0
SYD3_k127_9322872_5 Belongs to the ABC transporter superfamily K02031,K02032,K13896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000073 264.0
SYD3_k127_9322872_6 - - - - 0.0000000000000000000000000000000000000488 147.0
SYD3_k127_9322872_7 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.00000000000000000001018 96.0
SYD3_k127_9345352_0 regulator of chromosome condensation, RCC1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005231 271.0
SYD3_k127_9345352_1 IMG reference gene - - - 0.0000000000000000000000000000000000000000000000000009691 211.0
SYD3_k127_9345352_2 Thioesterase domain - - - 0.0000000000000000000000000000000000000000000001814 175.0
SYD3_k127_9345352_3 Transcriptional regulator - - - 0.0000000000000000000000000000001146 126.0
SYD3_k127_9345352_4 - - - - 0.00000000001052 66.0
SYD3_k127_9345352_5 metallopeptidase activity K12287 - - 0.0002007 55.0
SYD3_k127_9407813_0 Amino acid permease K03294,K03758 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008921 505.0
SYD3_k127_9407813_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 471.0
SYD3_k127_9407813_2 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001744 245.0
SYD3_k127_9407813_3 - - - - 0.00000000000000000000000000000000000000000000000000000007188 203.0
SYD3_k127_9407813_4 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000001343 194.0
SYD3_k127_9407813_5 COG0346 Lactoylglutathione lyase and related lyases K07032 - - 0.00000000000000000000000000000000000000000000000002128 183.0
SYD3_k127_9407813_6 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000000000001925 174.0
SYD3_k127_9407813_7 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000003296 172.0
SYD3_k127_9407813_8 bifunctional deaminase-reductase domain protein - - - 0.000000000001128 71.0
SYD3_k127_9407813_9 - - - - 0.000000000001839 70.0
SYD3_k127_9469315_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1223.0
SYD3_k127_9469315_1 of the AAA class - - - 0.0 1163.0
SYD3_k127_9469315_10 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 3.142e-218 689.0
SYD3_k127_9469315_11 Glycosyl hydrolase family 20, domain 2 K12373 - 3.2.1.52 1.616e-217 693.0
SYD3_k127_9469315_12 Peptidase M1, membrane alanine aminopeptidase - - - 1.359e-212 677.0
SYD3_k127_9469315_13 Belongs to the glycosyl hydrolase 2 family K01190 - 3.2.1.23 4.881e-210 666.0
SYD3_k127_9469315_14 Na+/H+ antiporter family - - - 3.372e-209 670.0
SYD3_k127_9469315_15 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005874 537.0
SYD3_k127_9469315_16 ADP binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008832 543.0
SYD3_k127_9469315_17 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003361 508.0
SYD3_k127_9469315_18 DoxX family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 468.0
SYD3_k127_9469315_19 Outer membrane protein protective antigen OMA87 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 466.0
SYD3_k127_9469315_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1034.0
SYD3_k127_9469315_20 COGs COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007888 441.0
SYD3_k127_9469315_21 Xylose isomerase-like TIM barrel K01816 - 5.3.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005012 424.0
SYD3_k127_9469315_22 Phosphotriesterase family K07048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 424.0
SYD3_k127_9469315_23 saccharopine dehydrogenase activity K00290 - 1.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 417.0
SYD3_k127_9469315_24 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007001 400.0
SYD3_k127_9469315_25 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005231 411.0
SYD3_k127_9469315_26 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 378.0
SYD3_k127_9469315_27 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 353.0
SYD3_k127_9469315_28 Signal transduction response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007845 344.0
SYD3_k127_9469315_29 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 334.0
SYD3_k127_9469315_3 GTP-binding protein TypA K06207 - - 7.737e-306 946.0
SYD3_k127_9469315_30 Psort location Cytoplasmic, score 8.96 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007082 332.0
SYD3_k127_9469315_31 deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007328 318.0
SYD3_k127_9469315_32 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005226 299.0
SYD3_k127_9469315_33 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000543 295.0
SYD3_k127_9469315_34 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007342 276.0
SYD3_k127_9469315_35 Kelch motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001414 271.0
SYD3_k127_9469315_36 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000143 239.0
SYD3_k127_9469315_37 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000001001 225.0
SYD3_k127_9469315_38 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000001627 234.0
SYD3_k127_9469315_39 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000613 218.0
SYD3_k127_9469315_4 DNA segregation ATPase FtsK SpoIIIE and related K03466 - - 1.244e-281 889.0
SYD3_k127_9469315_40 NAD dependent epimerase dehydratase family protein K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000006543 222.0
SYD3_k127_9469315_41 adenosine deaminase K01488,K02029,K21053 - 3.5.4.2,3.5.4.4 0.0000000000000000000000000000000000000000000000000000000000007562 221.0
SYD3_k127_9469315_42 RNA methyltransferase, TrmH K03437 - - 0.000000000000000000000000000000000000000000000000004474 190.0
SYD3_k127_9469315_43 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000001401 181.0
SYD3_k127_9469315_44 CAAX amino terminal protease family K07052 - - 0.0000000000000000000000000000000000000000000001132 180.0
SYD3_k127_9469315_45 leucine binding - - - 0.0000000000000000000000000000000000000000000001945 185.0
SYD3_k127_9469315_46 Transporter - - - 0.00000000000000000000000000000000000000009566 162.0
SYD3_k127_9469315_47 Gluconate 2-dehydrogenase subunit 3 - - - 0.000000000000000000000000000000000000006429 152.0
SYD3_k127_9469315_48 DinB family - - - 0.0000000000000000000000000000000000001256 146.0
SYD3_k127_9469315_49 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000001558 145.0
SYD3_k127_9469315_5 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 1.298e-279 874.0
SYD3_k127_9469315_50 - - - - 0.000000000000000000000000000000000007507 143.0
SYD3_k127_9469315_51 PFAM Uncharacterised protein family UPF0029, Impact, N-terminal - - - 0.000000000000000000000000000000000008651 144.0
SYD3_k127_9469315_52 IMP dehydrogenase activity K04767,K07182 - - 0.00000000000000000000000000003928 121.0
SYD3_k127_9469315_53 - - - - 0.00000000000000000000000003994 116.0
SYD3_k127_9469315_54 PFAM Outer membrane lipoprotein carrier protein LolA K03634 - - 0.000000000000000000009182 101.0
SYD3_k127_9469315_55 heme copper-type cytochrome quinol oxidase, subunit 3 K02276 - 1.9.3.1 0.000000000000002167 85.0
SYD3_k127_9469315_6 COG2303 Choline dehydrogenase and related - - - 5.171e-262 817.0
SYD3_k127_9469315_7 Aldehyde dehydrogenase family K00294,K13821 - 1.2.1.88,1.5.5.2 1.096e-255 801.0
SYD3_k127_9469315_8 Tetratricopeptide repeat - - - 3.914e-252 796.0
SYD3_k127_9469315_9 Alpha-amylase domain K21575 - 3.2.1.135 3.811e-243 765.0
SYD3_k127_9537875_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1055.0
SYD3_k127_9537875_1 TonB dependent receptor K21573 - - 1.067e-247 784.0
SYD3_k127_9537875_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 1.788e-231 745.0
SYD3_k127_9537875_3 Belongs to the glycosyl hydrolase 32 family K03332 - 3.2.1.80 1.215e-197 628.0
SYD3_k127_9537875_4 PFAM Acetyl-CoA hydrolase transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 583.0
SYD3_k127_9537875_5 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 567.0
SYD3_k127_9537875_6 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009297 344.0
SYD3_k127_9537875_7 Sigma 54 modulation protein / S30EA ribosomal protein K05808 - - 0.000000000000002111 85.0
SYD3_k127_9537875_8 - - - - 0.00000000002398 73.0
SYD3_k127_960310_0 Biotin carboxylase C-terminal domain K01961,K01965 - 6.3.4.14,6.4.1.2,6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008715 477.0
SYD3_k127_960310_1 Belongs to the KdsA family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008905 448.0
SYD3_k127_960310_2 Transaldolase/Fructose-6-phosphate aldolase K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 436.0
SYD3_k127_960310_3 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000000000000000004045 210.0
SYD3_k127_9629248_0 Putative collagen-binding domain of a collagenase - - - 4.005e-208 668.0
SYD3_k127_9629248_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 6.946e-207 659.0
SYD3_k127_9629248_10 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 406.0
SYD3_k127_9629248_11 Belongs to the peptidase S8 family K01342,K08651,K14645 - 3.4.21.62,3.4.21.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005871 396.0
SYD3_k127_9629248_12 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 313.0
SYD3_k127_9629248_13 Rhodanese Homology Domain K06917 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 312.0
SYD3_k127_9629248_14 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002025 243.0
SYD3_k127_9629248_15 Peptidase family S51 - - - 0.00000000000000000000000000000000000000000000000000000000000005144 220.0
SYD3_k127_9629248_16 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000008858 221.0
SYD3_k127_9629248_17 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000128 209.0
SYD3_k127_9629248_18 Exonuclease - - - 0.0000000000000000000000000000000000000000000000000000001116 200.0
SYD3_k127_9629248_19 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000001125 187.0
SYD3_k127_9629248_2 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 6.308e-200 630.0
SYD3_k127_9629248_21 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000001484 125.0
SYD3_k127_9629248_22 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00000000000000000004264 93.0
SYD3_k127_9629248_23 Domain of unknown function (DUF4395) - - - 0.000000000000000004109 90.0
SYD3_k127_9629248_25 negative regulation of extracellular matrix assembly K03006 - 2.7.7.6 0.00002461 49.0
SYD3_k127_9629248_3 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 593.0
SYD3_k127_9629248_4 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006478 577.0
SYD3_k127_9629248_5 Protein of unknown function (DUF2867) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 517.0
SYD3_k127_9629248_6 Thioredoxin reductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004191 502.0
SYD3_k127_9629248_7 Belongs to the BshC family K22136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008954 447.0
SYD3_k127_9629248_8 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 452.0
SYD3_k127_9629248_9 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003277 430.0
SYD3_k127_9630613_0 RagB SusD domain protein K21572 - - 3.49e-265 835.0
SYD3_k127_9630613_1 Belongs to the glycosyl hydrolase 13 family - - - 7.374e-253 811.0
SYD3_k127_9630613_2 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 522.0
SYD3_k127_9630613_3 Outer membrane receptor K21573 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 318.0
SYD3_k127_9630613_4 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001025 280.0
SYD3_k127_9630613_5 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003759 276.0
SYD3_k127_9630613_6 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004078 271.0
SYD3_k127_9630613_7 Acetyltransferase (GNAT) domain K03830 - - 0.0000000000000000000000000000000008698 141.0
SYD3_k127_9637994_0 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component K02004 - - 1.422e-309 970.0
SYD3_k127_9637994_1 membrane protein involved in D-alanine export - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008742 578.0
SYD3_k127_9637994_10 Methyltransferase domain - - - 0.000000000000000000000000000000000000000005158 165.0
SYD3_k127_9637994_11 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000002001 165.0
SYD3_k127_9637994_12 - - - - 0.000000000000000000000000000000000000002548 156.0
SYD3_k127_9637994_13 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000004085 153.0
SYD3_k127_9637994_14 Sulfotransferase family - - - 0.0000000000000000000000001809 117.0
SYD3_k127_9637994_15 Pkd domain containing protein - - - 0.00000000000000000006521 98.0
SYD3_k127_9637994_16 Sulfotransferase domain - - - 0.000000000000000002445 100.0
SYD3_k127_9637994_17 transposase activity - - - 0.000000000000002219 76.0
SYD3_k127_9637994_18 - - - - 0.00000000002117 75.0
SYD3_k127_9637994_2 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 566.0
SYD3_k127_9637994_3 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 316.0
SYD3_k127_9637994_4 COG2755 Lysophospholipase L1 and related K10804 - 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000002816 250.0
SYD3_k127_9637994_5 Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000001609 244.0
SYD3_k127_9637994_6 carbohydrate metabolic process - - - 0.00000000000000000000000000000000000000000000000000000005377 205.0
SYD3_k127_9637994_7 Nodulation protein S (NodS) - - - 0.0000000000000000000000000000000000000000000000000000005579 203.0
SYD3_k127_9637994_8 - - - - 0.0000000000000000000000000000000000000000000000000000007078 198.0
SYD3_k127_9637994_9 carbohydrate metabolic process - - - 0.0000000000000000000000000000000000000000000002028 178.0
SYD3_k127_9653844_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 8.879e-298 930.0
SYD3_k127_9653844_1 Tetratricopeptide repeat protein - - - 3.348e-208 681.0
SYD3_k127_9653844_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 556.0
SYD3_k127_9653844_3 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007269 324.0
SYD3_k127_9653844_4 Belongs to the RimK family K05844 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007988 296.0
SYD3_k127_9653844_5 peptidase M23 - - - 0.00000000000000000000000000000000000000000000000000000006018 205.0
SYD3_k127_9653844_6 Protein of unknown function (DUF1698) - - - 0.00000000000000000000000000000000000000000000005556 177.0
SYD3_k127_9653844_7 COGs COG2270 Permease of the major facilitator superfamily K06902 - - 0.00000000000000000000000003145 115.0
SYD3_k127_9653844_8 Low molecular weight phosphatase family K01104 - 3.1.3.48 0.00005684 46.0
SYD3_k127_9653844_9 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00007403 48.0
SYD3_k127_9686490_0 TamB, inner membrane protein subunit of TAM complex - - - 6.32e-224 752.0
SYD3_k127_9686490_1 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 506.0
SYD3_k127_9686490_10 Protein of unknown function (DUF433) - - - 0.0000000000000000000001331 99.0
SYD3_k127_9686490_11 - - - - 0.00000001594 62.0
SYD3_k127_9686490_2 transport system involved in gliding motility, auxiliary component K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 503.0
SYD3_k127_9686490_3 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000586 488.0
SYD3_k127_9686490_4 S1 P1 Nuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002985 406.0
SYD3_k127_9686490_5 COG1131 ABC-type multidrug transport system ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 347.0
SYD3_k127_9686490_6 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 308.0
SYD3_k127_9686490_7 TIGRFAM Gliding motility-associated ABC transporter permease protein GldF K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001181 278.0
SYD3_k127_9686490_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000002624 232.0
SYD3_k127_9686490_9 - - - - 0.0000000000000000000000002222 109.0
SYD3_k127_9690849_0 elongation factor G domain IV K02355 - - 2.744e-320 993.0
SYD3_k127_9690849_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 442.0
SYD3_k127_9690849_2 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.0000000255 57.0
SYD3_k127_9704433_0 peptidase - - - 1.153e-215 687.0
SYD3_k127_9704433_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002672 445.0
SYD3_k127_9704433_2 acyl-CoA reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005509 348.0
SYD3_k127_9704433_3 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005411 303.0
SYD3_k127_9704433_4 Peptidase S9 - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044464,GO:0046983,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000002432 207.0
SYD3_k127_9704433_5 DNA-templated transcription, initiation K03088,K03091 - - 0.000000000000005219 82.0
SYD3_k127_9704433_6 chaperone-mediated protein folding - - - 0.0000001969 61.0
SYD3_k127_9704433_7 COG0457 FOG TPR repeat - - - 0.0004742 44.0
SYD3_k127_9711493_0 SPFH Band 7 PHB domain protein K07192 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003111 561.0
SYD3_k127_9711493_1 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 526.0
SYD3_k127_9711493_2 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008203 499.0
SYD3_k127_9711493_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 395.0
SYD3_k127_9711493_4 amidohydrolase K13566 - 3.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004564 271.0
SYD3_k127_9711493_5 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000009289 198.0
SYD3_k127_9711493_6 of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000122 148.0
SYD3_k127_9711493_7 CBS domain - - - 0.0000000000000000000000000000015 126.0
SYD3_k127_9711493_8 serine protease - - - 0.0000000000000000000000000005313 121.0
SYD3_k127_9726474_0 PFAM EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007831 291.0
SYD3_k127_9726474_1 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001928 276.0
SYD3_k127_9726474_2 NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000000000000000000000857 261.0
SYD3_k127_9726474_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000929 197.0
SYD3_k127_9726474_4 PFAM Integrase core domain - - - 0.000000000000000000000000000000000000000000000000002827 196.0
SYD3_k127_9726474_5 Clp protease adaptor protein ClpS K06891 - - 0.0000000000000000000000001009 109.0
SYD3_k127_9726474_6 transposase activity - - - 0.0000000000000006549 78.0
SYD3_k127_9726474_7 Transposase K07497 - - 0.0000000002422 65.0
SYD3_k127_9826963_0 Peptidase family C25 - - - 5.833e-251 833.0
SYD3_k127_9826963_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 518.0
SYD3_k127_9826963_10 Sulfotransferase domain - - - 0.0000000000000000000000000000000000000226 155.0
SYD3_k127_9826963_11 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000007083 143.0
SYD3_k127_9826963_12 Sulfotransferase family - - - 0.00000000000000000000006102 108.0
SYD3_k127_9826963_13 TIGRFAM Gliding motility-associated lipoprotein, GldH - GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006040,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0017144,GO:0040011,GO:0042737,GO:0043170,GO:0044237,GO:0044248,GO:0046348,GO:0048870,GO:0051179,GO:0051674,GO:0071704,GO:0071976,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000001896 99.0
SYD3_k127_9826963_14 Sec-independent protein translocase protein TatA K03116 - - 0.0000000000000000007206 89.0
SYD3_k127_9826963_15 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position - - - 0.0000198 57.0
SYD3_k127_9826963_2 2-methylthioadenine synthetase K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 513.0
SYD3_k127_9826963_3 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 493.0
SYD3_k127_9826963_4 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007299 364.0
SYD3_k127_9826963_5 IMG reference gene - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002765 262.0
SYD3_k127_9826963_6 Gliding motility protein, GldB - - - 0.0000000000000000000000000000000000000000000000000000000000000000002272 244.0
SYD3_k127_9826963_7 IMG reference gene - - - 0.000000000000000000000000000000000000000000000000000000000000000001159 246.0
SYD3_k127_9826963_8 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000001851 191.0
SYD3_k127_9826963_9 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000005665 169.0
SYD3_k127_9869732_0 Peptidase family M49 - - - 2.462e-217 689.0
SYD3_k127_9869732_1 SMART Metal-dependent phosphohydrolase, HD region - - - 0.000000000000000000000000000000000000000000000000000000001661 207.0
SYD3_k127_9869732_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000001889 158.0
SYD3_k127_9869732_3 PAP2 superfamily - - - 0.0000000000000000000000000000000000000004869 160.0
SYD3_k127_9869732_4 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000001359 72.0
SYD3_k127_9900344_0 InterPro IPR003838 K02004 - - 2.978e-298 936.0
SYD3_k127_9900344_1 ABC-type antimicrobial peptide transport system, permease component K02004 - - 1.995e-277 876.0
SYD3_k127_9900344_2 MacB-like periplasmic core domain - - - 6.025e-196 638.0
SYD3_k127_9900344_3 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000949 351.0
SYD3_k127_9900344_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000007424 234.0
SYD3_k127_9900344_5 AraC-like ligand binding domain - - - 0.00000000000000000000000000000009988 127.0
SYD3_k127_9900344_6 permease - - - 0.0000000000000005018 78.0
SYD3_k127_9914132_0 Cytochrome C oxidase subunit I K02274 - 1.9.3.1 1.523e-246 772.0
SYD3_k127_9914132_1 COG2366 Protein related to penicillin acylase K01434 - 3.5.1.11 5.852e-224 719.0
SYD3_k127_9914132_10 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001114 278.0
SYD3_k127_9914132_11 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001223 245.0
SYD3_k127_9914132_12 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000005003 256.0
SYD3_k127_9914132_13 Protein of unknown function, DUF255 - - - 0.000000000000000000000000000000000000000000000000000000000000000003485 240.0
SYD3_k127_9914132_14 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000001993 226.0
SYD3_k127_9914132_15 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.00000000000000000000000000000000000000000000000000000000000001092 222.0
SYD3_k127_9914132_16 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000000000000000001441 216.0
SYD3_k127_9914132_17 COG0589 Universal stress protein UspA and related nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000000000002844 216.0
SYD3_k127_9914132_18 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000003431 205.0
SYD3_k127_9914132_19 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000041 194.0
SYD3_k127_9914132_2 Protein of unknown function (DUF3641) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 475.0
SYD3_k127_9914132_20 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.000000000000000000000000000000000000000000000000002807 188.0
SYD3_k127_9914132_21 Protein of unknown function (DUF1579) - - - 0.00000000000000000000000000000000000000000000001312 178.0
SYD3_k127_9914132_22 Serine protease, subtilase family - - - 0.00000000000000000000000000000000000000000000009233 188.0
SYD3_k127_9914132_23 Carboxymuconolactone decarboxylase family - - - 0.000000000000000000000000000000000000000000009215 165.0
SYD3_k127_9914132_24 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000009494 166.0
SYD3_k127_9914132_25 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.0000000000000000000000000000000000000000475 158.0
SYD3_k127_9914132_26 Phosphoglycerate mutase family K08296 - - 0.0000000000000000000000000000000000000003095 154.0
SYD3_k127_9914132_27 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000001741 149.0
SYD3_k127_9914132_28 Protein of unknown function (DUF1761) - - - 0.000000000000000000000000000000000002052 143.0
SYD3_k127_9914132_29 IMP dehydrogenase activity K04767,K07182 - - 0.0000000000000000000000000000000007321 136.0
SYD3_k127_9914132_3 Pkd domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 455.0
SYD3_k127_9914132_30 PFAM Peptidase family S41 - - - 0.000000000000000000000000000000001463 147.0
SYD3_k127_9914132_31 UbiA prenyltransferase family K03179 - 2.5.1.39 0.0000000000000000000000000001203 126.0
SYD3_k127_9914132_32 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell - - - 0.0000000000000000000000000005839 125.0
SYD3_k127_9914132_34 PFAM Cytochrome c, class I - - - 0.000000000000000000000001593 109.0
SYD3_k127_9914132_35 tail collar domain protein - - - 0.00000000000000000000003544 113.0
SYD3_k127_9914132_36 Inorganic pyrophosphatase K01507 - 3.6.1.1 0.0000000000000000000001065 106.0
SYD3_k127_9914132_37 Sigma-70 region 2 K03088 - - 0.0000000000000000000001375 106.0
SYD3_k127_9914132_38 2TM domain - - - 0.0000000000000000000001476 102.0
SYD3_k127_9914132_39 DinB family - - - 0.00000000000000000001688 98.0
SYD3_k127_9914132_4 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 451.0
SYD3_k127_9914132_40 - - - - 0.0000000000001359 79.0
SYD3_k127_9914132_41 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism K21053 - 3.5.4.2 0.00000000004981 67.0
SYD3_k127_9914132_42 Hep Hag repeat protein - - - 0.0000008369 60.0
SYD3_k127_9914132_43 AntiSigma factor - - - 0.00000634 57.0
SYD3_k127_9914132_44 Pectate lyase - - - 0.000009884 58.0
SYD3_k127_9914132_45 COG NOG25370 non supervised orthologous group - - - 0.0005941 48.0
SYD3_k127_9914132_5 AsmA-like C-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004307 443.0
SYD3_k127_9914132_6 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 402.0
SYD3_k127_9914132_7 Histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 379.0
SYD3_k127_9914132_8 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 371.0
SYD3_k127_9914132_9 COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA K06169 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008254 290.0
SYD3_k127_9931522_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 557.0
SYD3_k127_9931522_1 Protein involved in outer membrane biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 556.0
SYD3_k127_9931522_10 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K00773,K11782,K15461 - 2.1.1.61,2.4.2.29,4.2.1.151 0.0000000000000000000000000000000000000000000000000000004839 200.0
SYD3_k127_9931522_11 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000009962 198.0
SYD3_k127_9931522_12 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.00000000000000000000000000000000000000000001265 166.0
SYD3_k127_9931522_13 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000003164 151.0
SYD3_k127_9931522_14 zinc metalloprotease - - - 0.000000000236 73.0
SYD3_k127_9931522_15 AhpC/TSA family - - - 0.000000000312 73.0
SYD3_k127_9931522_17 AhpC/TSA family - - - 0.0000004679 61.0
SYD3_k127_9931522_2 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008658 426.0
SYD3_k127_9931522_3 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 378.0
SYD3_k127_9931522_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008298 332.0
SYD3_k127_9931522_5 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003643 317.0
SYD3_k127_9931522_6 Polyphosphate nucleotide phosphotransferase, PPK2 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003653 306.0
SYD3_k127_9931522_7 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 304.0
SYD3_k127_9931522_8 Mur ligase middle domain K01924,K02558 - 6.3.2.45,6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 290.0
SYD3_k127_9931522_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006943 249.0
SYD3_k127_9935014_0 Sugar (and other) transporter - - - 4.052e-231 724.0
SYD3_k127_9935014_1 Alpha-acetolactate decarboxylase K01575 - 4.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000008228 267.0
SYD3_k127_9935014_2 Winged helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000005842 193.0
SYD3_k127_9935014_4 - - - - 0.00000003286 64.0
SYD3_k127_994750_0 Large extracellular alpha-helical protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004463 441.0
SYD3_k127_994750_1 domain, Protein - - - 0.00000000000000000000000000005442 138.0
SYD3_k127_9949033_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006282 591.0
SYD3_k127_9949033_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 364.0
SYD3_k127_9949033_2 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 362.0
SYD3_k127_9949033_3 Efflux transporter, RND family, MFP subunit K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005551 294.0
SYD3_k127_9949033_4 Mut7-C RNAse domain - - - 0.00000000000000000000000000000634 122.0
SYD3_k127_9949033_5 Protein of unknown function (DUF433) - - - 0.00000000000000000000000000001483 119.0
SYD3_k127_9949033_6 - - - - 0.0000000000000000000000000003546 116.0
SYD3_k127_9980291_0 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005701 486.0
SYD3_k127_9980291_1 Oxidoreductase family, NAD-binding Rossmann fold K00118 - 1.1.99.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 475.0
SYD3_k127_9980291_2 Protein of unknown function (DUF2652) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 411.0
SYD3_k127_9980291_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000006653 141.0