Overview

ID MAG03797
Name SYD3_bin.31
Sample SMP0096
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Alphaproteobacteria
Order Rhizobiales
Family Xanthobacteraceae
Genus Pseudolabrys
Species
Assembly information
Completeness (%) 88.82
Contamination (%) 3.84
GC content (%) 62.0
N50 (bp) 34,852
Genome size (bp) 3,557,472

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3466

Gene name Description KEGG GOs EC E-value Score Sequence
SYD3_k127_10151614_0 Adenylate cyclase K01768 - 4.6.1.1 4.856e-255 798.0
SYD3_k127_10151614_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 7.44e-238 748.0
SYD3_k127_10151614_2 Terminase RNaseH-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003482 550.0
SYD3_k127_10151614_3 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001138 241.0
SYD3_k127_10151614_4 Glycosyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000005428 233.0
SYD3_k127_10151614_5 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000002444 199.0
SYD3_k127_10151614_6 Protein of unknown function (DUF805) - - - 0.00000000000000000000000000735 115.0
SYD3_k127_10151614_7 - - - - 0.000000000000000000000008254 111.0
SYD3_k127_10151614_8 Monogalactosyldiacylglycerol (MGDG) synthase K03429 - 2.4.1.315 0.0006416 51.0
SYD3_k127_10164839_0 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000003467 203.0
SYD3_k127_1020598_0 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K10764 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 603.0
SYD3_k127_1020598_1 2'-deoxycytidine 5'-triphosphate deaminase (DCD) K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009144 583.0
SYD3_k127_1020598_10 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003297 462.0
SYD3_k127_1020598_11 Alpha/beta hydrolase family K01561 - 3.8.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005806 440.0
SYD3_k127_1020598_12 Lysylphosphatidylglycerol synthase TM region K07027,K14205 - 2.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 441.0
SYD3_k127_1020598_13 Phosphate transport system permease K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 433.0
SYD3_k127_1020598_14 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007248 438.0
SYD3_k127_1020598_15 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000564 424.0
SYD3_k127_1020598_16 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 426.0
SYD3_k127_1020598_17 Transcriptional regulatory protein, C terminal K07657 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000728 407.0
SYD3_k127_1020598_18 Electron transfer flavoprotein K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 407.0
SYD3_k127_1020598_19 Glycosyl transferase family group 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004964 405.0
SYD3_k127_1020598_2 Aminotransferase class-III K00821 GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000296 573.0
SYD3_k127_1020598_20 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 385.0
SYD3_k127_1020598_21 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004529 362.0
SYD3_k127_1020598_22 belongs to the carbohydrate kinase PfkB family K16370 - 2.7.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 348.0
SYD3_k127_1020598_23 Bacterial protein of unknown function (DUF899) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000502 337.0
SYD3_k127_1020598_24 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 322.0
SYD3_k127_1020598_25 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 303.0
SYD3_k127_1020598_26 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006158 279.0
SYD3_k127_1020598_27 Thioredoxin-like - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000732 278.0
SYD3_k127_1020598_28 electron transport protein SCO1 SenC K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001875 272.0
SYD3_k127_1020598_29 PFAM lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000003223 243.0
SYD3_k127_1020598_3 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004194 556.0
SYD3_k127_1020598_30 GcrA cell cycle regulator K13583 - - 0.0000000000000000000000000000000000000000000000000000000000000000004282 231.0
SYD3_k127_1020598_31 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000001152 227.0
SYD3_k127_1020598_32 ApaG domain K06195 - - 0.000000000000000000000000000000000000000000000000000001951 197.0
SYD3_k127_1020598_33 AntiSigma factor - - - 0.00000000000000000000000000000000000000000000000000003109 198.0
SYD3_k127_1020598_34 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000000000000004229 189.0
SYD3_k127_1020598_35 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000102 148.0
SYD3_k127_1020598_36 PFAM Glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.0000000000000000000001058 102.0
SYD3_k127_1020598_37 Hypoxia induced protein conserved region - - - 0.0000000000000000000004834 96.0
SYD3_k127_1020598_4 OpgC protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000784 520.0
SYD3_k127_1020598_40 - - - - 0.0000005972 53.0
SYD3_k127_1020598_5 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 511.0
SYD3_k127_1020598_6 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002903 500.0
SYD3_k127_1020598_7 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 507.0
SYD3_k127_1020598_8 Electron transfer flavoprotein K03522 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 489.0
SYD3_k127_1020598_9 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 477.0
SYD3_k127_10214868_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 4.095e-284 876.0
SYD3_k127_10214868_1 Cys/Met metabolism PLP-dependent enzyme K01738,K01740 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003961,GO:0004124,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006555,GO:0006563,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0017144,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0050667,GO:0071265,GO:0071266,GO:0071268,GO:0071269,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47,2.5.1.49 4.483e-245 761.0
SYD3_k127_10214868_10 Pfam:Pyridox_oxidase K07006 - - 0.0000000000000000000000000000000000000000000000000000000000000000003843 234.0
SYD3_k127_10214868_11 Belongs to the P(II) protein family K04751 GO:0003674,GO:0006808,GO:0008150,GO:0030234,GO:0050789,GO:0050790,GO:0065007,GO:0065009,GO:0098772 - 0.000000000000000000000000000000000000000000000000000000000000001617 219.0
SYD3_k127_10214868_12 - - - - 0.000000000000000000000000000000000000000000000006231 175.0
SYD3_k127_10214868_13 protein possibly involved in aromatic compounds catabolism - - - 0.000000000000000000000000000000000000000000004742 168.0
SYD3_k127_10214868_14 Protein of unknown function (DUF3175) - - - 0.000000000000000000000000166 108.0
SYD3_k127_10214868_15 Protein of unknown function (DUF2842) - - - 0.000000000000000001021 92.0
SYD3_k127_10214868_16 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration - - - 0.000000007952 59.0
SYD3_k127_10214868_2 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 426.0
SYD3_k127_10214868_3 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 419.0
SYD3_k127_10214868_4 enoyl-CoA hydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002875 365.0
SYD3_k127_10214868_5 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 352.0
SYD3_k127_10214868_6 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 308.0
SYD3_k127_10214868_7 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002013 270.0
SYD3_k127_10214868_8 Ribosomal protein S9/S16 K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003834 260.0
SYD3_k127_10214868_9 CoA binding domain K06929 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000004598 244.0
SYD3_k127_10217641_0 Angiotensin-converting enzyme K01283 - 3.4.15.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003703 357.0
SYD3_k127_10217641_1 Belongs to the GST superfamily K11209 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 336.0
SYD3_k127_10226385_0 carnitine dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 576.0
SYD3_k127_10226385_1 Protein of unknown function (DUF3568) - - - 0.000000000000000000001012 99.0
SYD3_k127_10226385_2 Protein conserved in bacteria - - - 0.0000000001828 65.0
SYD3_k127_10261820_0 FAD binding domain K00244 - 1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003817 542.0
SYD3_k127_10261820_1 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 373.0
SYD3_k127_10261820_10 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00000001569 56.0
SYD3_k127_10261820_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 323.0
SYD3_k127_10261820_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 299.0
SYD3_k127_10261820_4 asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007916 284.0
SYD3_k127_10261820_5 Phospholipid methyltransferase - - - 0.00000000000000000000000000000000000000000000000000004737 193.0
SYD3_k127_10261820_6 Cmp dcmp deaminase zinc-binding K01493 - 3.5.4.12 0.000000000000000000000000007014 115.0
SYD3_k127_10261820_7 Fumarate reductase flavoprotein C-term - - - 0.000000000000000000000005308 105.0
SYD3_k127_10261820_8 Cytochrome c - - - 0.00000000000000000002211 96.0
SYD3_k127_10261820_9 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000003696 65.0
SYD3_k127_10351156_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1398.0
SYD3_k127_10351156_1 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 2.196e-303 940.0
SYD3_k127_10351156_10 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 406.0
SYD3_k127_10351156_11 PFAM SAICAR synthetase K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 332.0
SYD3_k127_10351156_12 PFAM regulatory protein LysR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 328.0
SYD3_k127_10351156_13 HpcH/HpaI aldolase/citrate lyase family K02510 - 4.1.2.52 0.000000000000000000000000000000000000000000000000000000001794 213.0
SYD3_k127_10351156_14 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000026 203.0
SYD3_k127_10351156_15 protein-(glutamine-N5) methyltransferase activity K00543,K16130,K18896,K18897,K21515 - 2.1.1.156,2.1.1.157,2.1.1.209,2.1.1.4 0.000000000000000000000000000000000000006059 155.0
SYD3_k127_10351156_16 Domain of unknown function (DUF1476) - - - 0.00000000000000000000000000000000000004531 149.0
SYD3_k127_10351156_17 - - - - 0.00000000000000000000783 93.0
SYD3_k127_10351156_18 Ribbon-helix-helix domain - - - 0.000000000000000002085 89.0
SYD3_k127_10351156_19 - - - - 0.000000001142 65.0
SYD3_k127_10351156_2 Periplasmic binding protein domain - - - 1.687e-236 741.0
SYD3_k127_10351156_3 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 4.353e-233 725.0
SYD3_k127_10351156_4 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 GO:0003674,GO:0003824,GO:0004333,GO:0005488,GO:0005515,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016860,GO:0016862,GO:0016999,GO:0017144,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0048037,GO:0050163,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 2.617e-219 683.0
SYD3_k127_10351156_5 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0071496 - 3.901e-196 618.0
SYD3_k127_10351156_6 SpoU rRNA Methylase family K02533 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 543.0
SYD3_k127_10351156_7 symbiont process K00612 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000538 548.0
SYD3_k127_10351156_8 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006094 495.0
SYD3_k127_10351156_9 COG1226 Kef-type K transport systems K10716 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0042802,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 465.0
SYD3_k127_10362599_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.11.1.21 0.0 1344.0
SYD3_k127_10362599_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1293.0
SYD3_k127_10362599_10 Beta-ketoacyl synthase, C-terminal domain K00647 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.41 1.004e-225 703.0
SYD3_k127_10362599_11 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 8.021e-224 703.0
SYD3_k127_10362599_12 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 8.014e-220 688.0
SYD3_k127_10362599_13 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 8.449e-218 692.0
SYD3_k127_10362599_14 Rieske [2Fe-2S] domain - - - 1.017e-211 664.0
SYD3_k127_10362599_15 Belongs to the glutamine synthetase family K01915 - 6.3.1.2 5.243e-208 659.0
SYD3_k127_10362599_16 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 1.396e-198 627.0
SYD3_k127_10362599_17 Phosphotransferase enzyme family K07102 - 2.7.1.221 2.146e-197 628.0
SYD3_k127_10362599_18 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 614.0
SYD3_k127_10362599_19 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 597.0
SYD3_k127_10362599_2 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.0 1211.0
SYD3_k127_10362599_20 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 592.0
SYD3_k127_10362599_21 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038,K21977 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 587.0
SYD3_k127_10362599_22 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.1.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 563.0
SYD3_k127_10362599_23 PhoH-like protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 538.0
SYD3_k127_10362599_24 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 511.0
SYD3_k127_10362599_25 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 482.0
SYD3_k127_10362599_26 pfkB family carbohydrate kinase K00847,K00856 - 2.7.1.20,2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006187 469.0
SYD3_k127_10362599_27 Enoyl- acyl-carrier-protein reductase NADH K00208 GO:0003674,GO:0003824,GO:0004312,GO:0004318,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0030497,GO:0032787,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:1901576 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007062 446.0
SYD3_k127_10362599_28 signal peptide peptidase SppA K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003854 434.0
SYD3_k127_10362599_29 Transporter associated domain K06189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 432.0
SYD3_k127_10362599_3 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1166.0
SYD3_k127_10362599_30 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 424.0
SYD3_k127_10362599_31 ThiF family K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006927 414.0
SYD3_k127_10362599_32 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004409 405.0
SYD3_k127_10362599_33 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 405.0
SYD3_k127_10362599_34 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 392.0
SYD3_k127_10362599_35 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 371.0
SYD3_k127_10362599_36 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007536 369.0
SYD3_k127_10362599_37 LysR family K04761 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 362.0
SYD3_k127_10362599_38 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 357.0
SYD3_k127_10362599_39 Alpha/beta hydrolase family K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 353.0
SYD3_k127_10362599_4 PD-(D/E)XK nuclease superfamily K16898 - 3.6.4.12 0.0 1108.0
SYD3_k127_10362599_40 Nucleotidyl transferase K00966,K00992 - 2.7.7.13,2.7.7.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 328.0
SYD3_k127_10362599_41 Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length K01716 - 4.2.1.59,5.3.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 323.0
SYD3_k127_10362599_42 Putative peptidoglycan binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004074 335.0
SYD3_k127_10362599_43 Scaffold protein Nfu/NifU N terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 302.0
SYD3_k127_10362599_44 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 299.0
SYD3_k127_10362599_45 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006436 290.0
SYD3_k127_10362599_46 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 291.0
SYD3_k127_10362599_47 Glycoprotease family K01409,K14742 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008034 283.0
SYD3_k127_10362599_48 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001587 282.0
SYD3_k127_10362599_49 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001614 280.0
SYD3_k127_10362599_5 PD-(D/E)XK nuclease superfamily K16899 - 3.6.4.12 0.0 1050.0
SYD3_k127_10362599_50 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000001129 265.0
SYD3_k127_10362599_51 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000002369 257.0
SYD3_k127_10362599_52 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004733 248.0
SYD3_k127_10362599_53 Belongs to the Fur family K09826 - - 0.0000000000000000000000000000000000000000000000000000000000000000005377 231.0
SYD3_k127_10362599_54 Ferric uptake regulator family K03711 - - 0.000000000000000000000000000000000000000000000000000000000000000001057 231.0
SYD3_k127_10362599_55 Bacterial SH3 domain K01876 - 6.1.1.12 0.0000000000000000000000000000000000000000000000000000000000000003482 225.0
SYD3_k127_10362599_56 Protein of unknown function (DUF448) K07742 - - 0.00000000000000000000000000000000000000000000000000000000000006778 222.0
SYD3_k127_10362599_57 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000000000000007169 214.0
SYD3_k127_10362599_58 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000003511 201.0
SYD3_k127_10362599_59 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000000000000003767 198.0
SYD3_k127_10362599_6 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 1.612e-315 974.0
SYD3_k127_10362599_60 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000000000000000000003005 196.0
SYD3_k127_10362599_61 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.000000000000000000000000000000000000000000000000000005125 196.0
SYD3_k127_10362599_62 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000000000000003226 191.0
SYD3_k127_10362599_63 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000003047 182.0
SYD3_k127_10362599_64 Bacterial regulatory protein, arsR family - - - 0.0000000000000000000000000000000000000000000000004113 177.0
SYD3_k127_10362599_65 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.000000000000000000000000000000000000000000000001328 178.0
SYD3_k127_10362599_66 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000000000000000000000000002144 177.0
SYD3_k127_10362599_67 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009889,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2001141 - 0.00000000000000000000000000000000000000000000004866 170.0
SYD3_k127_10362599_68 Protein of unknown function (DUF1428) - - - 0.000000000000000000000000000000000000000000005651 166.0
SYD3_k127_10362599_69 FR47-like protein K03789 - 2.3.1.128 0.0000000000000000000000000000000000000000001335 165.0
SYD3_k127_10362599_7 PAS fold - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 8.734e-294 923.0
SYD3_k127_10362599_70 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000008221 143.0
SYD3_k127_10362599_71 Transcriptional regulator - - - 0.00000000000000000000000000000000007241 143.0
SYD3_k127_10362599_72 Protein of unknown function (FYDLN_acid) - - - 0.00000000000000000000000004456 112.0
SYD3_k127_10362599_73 Lipopolysaccharide assembly protein A domain - - - 0.00000000000000000000001307 106.0
SYD3_k127_10362599_74 - - - - 0.00000000000000000000004964 102.0
SYD3_k127_10362599_75 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00000000000000000000007622 109.0
SYD3_k127_10362599_76 UPF0391 membrane protein - - - 0.0000003845 56.0
SYD3_k127_10362599_8 Participates in both transcription termination and antitermination K02600 - - 4.702e-282 872.0
SYD3_k127_10362599_9 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 2.351e-232 730.0
SYD3_k127_10368875_0 MMPL family K03296 - - 0.0 1482.0
SYD3_k127_10368875_1 Arginyl-tRNA synthetase K01887 - 6.1.1.19 2.902e-278 866.0
SYD3_k127_10368875_10 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006459 280.0
SYD3_k127_10368875_11 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000002085 254.0
SYD3_k127_10368875_12 Sporulation related domain - - - 0.00000000000000000000000000000000000000000000000000000005472 214.0
SYD3_k127_10368875_13 Belongs to the HesB IscA family K13628,K15724 - - 0.000000000000000000000000000000000000000000000004219 174.0
SYD3_k127_10368875_14 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 GO:0003674,GO:0005215 - 0.0000000000000000000000000001013 121.0
SYD3_k127_10368875_15 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 GO:0003674,GO:0005215 - 0.0000000000000000000002196 99.0
SYD3_k127_10368875_16 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000006281 72.0
SYD3_k127_10368875_2 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein - - - 1.711e-204 652.0
SYD3_k127_10368875_3 Belongs to the dGTPase family. Type 2 subfamily K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 517.0
SYD3_k127_10368875_4 Glycosyl hydrolase family 3 N terminal domain K01207,K05349 - 3.2.1.21,3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004328 450.0
SYD3_k127_10368875_5 exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 416.0
SYD3_k127_10368875_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008524 391.0
SYD3_k127_10368875_7 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 359.0
SYD3_k127_10368875_8 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 336.0
SYD3_k127_10368875_9 Sel1-like repeats. K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 320.0
SYD3_k127_10384209_0 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 2.146e-257 798.0
SYD3_k127_10384209_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0071704 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 490.0
SYD3_k127_10384209_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002077 433.0
SYD3_k127_10384209_3 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004533 364.0
SYD3_k127_10384209_4 Protein of unknown function (DUF1009) K09949 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 303.0
SYD3_k127_10384209_5 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000004528 239.0
SYD3_k127_10419466_0 Involved in the TonB-independent uptake of proteins K03641 - - 2.429e-227 709.0
SYD3_k127_10419466_1 LVIVD repeat - - - 2.717e-215 673.0
SYD3_k127_10419466_10 Cell division and transport-associated protein TolA - - - 0.00000000000000000000000000000000000000000000000000000000000000006218 238.0
SYD3_k127_10419466_11 Thioesterase superfamily K07107 - - 0.0000000000000000000000000000000000000000000000000000000000000003151 230.0
SYD3_k127_10419466_12 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000012 221.0
SYD3_k127_10419466_13 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.000000000000000000000000000000000000000000000000000000000003952 212.0
SYD3_k127_10419466_14 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000000000000000000000002422 210.0
SYD3_k127_10419466_15 PFAM Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000003765 177.0
SYD3_k127_10419466_16 Protein of unknown function (DUF2852) - - - 0.0000000000000000000000000000000000000000000000648 173.0
SYD3_k127_10419466_17 NUDIX domain K03574 - 3.6.1.55 0.00000000000000000000000000000000000000001057 156.0
SYD3_k127_10419466_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 563.0
SYD3_k127_10419466_3 YmdB-like protein K09769 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004333 434.0
SYD3_k127_10419466_4 MotA/TolQ/ExbB proton channel family K03562 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0017038,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000719 403.0
SYD3_k127_10419466_5 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 390.0
SYD3_k127_10419466_6 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 372.0
SYD3_k127_10419466_7 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004326 342.0
SYD3_k127_10419466_8 WHG domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000722 312.0
SYD3_k127_10419466_9 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.0000000000000000000000000000000000000000000000000000000000000000000315 235.0
SYD3_k127_10423036_0 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000693 228.0
SYD3_k127_10423036_1 PFAM Polysaccharide biosynthesis protein - - - 0.000002216 54.0
SYD3_k127_10718931_0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009301 469.0
SYD3_k127_1190597_0 P-type ATPase K17686 - 3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000001323 213.0
SYD3_k127_1190597_1 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000000000008088 180.0
SYD3_k127_120608_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002773 378.0
SYD3_k127_120608_1 iron ion homeostasis K02012 - - 0.00000001973 62.0
SYD3_k127_121814_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07638 - 2.7.13.3 5.069e-230 732.0
SYD3_k127_121814_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 599.0
SYD3_k127_121814_10 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 GO:0003674,GO:0003824,GO:0004735,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003723 321.0
SYD3_k127_121814_11 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 310.0
SYD3_k127_121814_12 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 296.0
SYD3_k127_121814_13 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008594 289.0
SYD3_k127_121814_14 Putative bacterial sensory transduction regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004192 251.0
SYD3_k127_121814_15 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000000000000000000000000002 229.0
SYD3_k127_121814_16 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000008481 217.0
SYD3_k127_121814_17 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000000000000000004172 184.0
SYD3_k127_121814_18 N-terminal half of MaoC dehydratase - - - 0.000000000000000000000000000000000000000000000001837 183.0
SYD3_k127_121814_19 PFAM MaoC domain protein dehydratase - - - 0.0000000000000000000000000000000000000000000003137 171.0
SYD3_k127_121814_2 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 536.0
SYD3_k127_121814_20 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.00000000000000000000000000000000000000002358 153.0
SYD3_k127_121814_21 Helix-turn-helix K07334,K21498 - - 0.00000000000000000000000000000000000007409 143.0
SYD3_k127_121814_22 - - - - 0.0000000000000000000000000000000000003806 150.0
SYD3_k127_121814_23 - - - - 0.000000000000000000000000000000000001091 142.0
SYD3_k127_121814_24 Membrane fusogenic activity K09806 - - 0.0000000000000000000000000000000002857 133.0
SYD3_k127_121814_25 - - - - 0.000000000000000000000001815 115.0
SYD3_k127_121814_26 - - - - 0.0000000000000000000002097 102.0
SYD3_k127_121814_27 - - - - 0.00000000000000000002083 96.0
SYD3_k127_121814_28 - - - - 0.000000000000007257 78.0
SYD3_k127_121814_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003456 438.0
SYD3_k127_121814_4 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 424.0
SYD3_k127_121814_5 Putative S-adenosyl-L-methionine-dependent methyltransferase K00574,K18164 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 422.0
SYD3_k127_121814_6 Dam-replacing family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 379.0
SYD3_k127_121814_7 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 358.0
SYD3_k127_121814_8 transcriptional regulator, winged helix family K07659 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 352.0
SYD3_k127_121814_9 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 337.0
SYD3_k127_1239113_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 5.559e-295 914.0
SYD3_k127_1239113_1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K03336 - 3.7.1.22 1.876e-278 868.0
SYD3_k127_1239113_10 Periplasmic binding protein K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000005576 231.0
SYD3_k127_1239113_11 Serine aminopeptidase, S33 K09023 - - 0.000000000000000000000000000000000000000006593 164.0
SYD3_k127_1239113_2 Molybdopterin-binding domain of aldehyde dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 513.0
SYD3_k127_1239113_3 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 431.0
SYD3_k127_1239113_4 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004775 416.0
SYD3_k127_1239113_5 Amidohydrolase K10220 - 4.2.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005269 409.0
SYD3_k127_1239113_6 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 354.0
SYD3_k127_1239113_7 Branched-chain amino acid ATP-binding cassette transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005693 345.0
SYD3_k127_1239113_8 Branched-chain amino acid transport K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 288.0
SYD3_k127_1239113_9 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000001192 256.0
SYD3_k127_1299481_0 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 313.0
SYD3_k127_1299481_1 PFAM amidohydrolase K01485 - 3.5.4.1 0.000000000000000000000000000000000000000000000000000000000000000008683 232.0
SYD3_k127_1299481_2 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000003684 226.0
SYD3_k127_1299481_3 NMT1/THI5 like - - - 0.000000000000000000000000000000002069 138.0
SYD3_k127_130836_0 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 417.0
SYD3_k127_130868_0 Protein of unknown function (DUF1214) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 488.0
SYD3_k127_130868_1 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) - - - 0.00000000000000000000000000000006552 128.0
SYD3_k127_130868_2 - - - - 0.0000000000000000000000000003104 116.0
SYD3_k127_130868_3 ParB-like nuclease domain - - - 0.000000000000000000000000001711 115.0
SYD3_k127_130868_4 Cysteine-rich secretory protein family - - - 0.0000000003193 64.0
SYD3_k127_130868_5 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.0000003145 58.0
SYD3_k127_130872_0 His Kinase A (phosphoacceptor) domain - - - 0.0 1472.0
SYD3_k127_130872_1 Sodium:solute symporter family K14393 - - 0.0 1109.0
SYD3_k127_130872_10 5-aminolevulinic acid synthase K00643 - 2.3.1.37 9.93e-225 700.0
SYD3_k127_130872_11 Tripartite ATP-independent periplasmic transporter, DctM component - - - 2.516e-222 697.0
SYD3_k127_130872_12 Threonine synthase N terminus K01733 GO:0003674,GO:0003824,GO:0004795,GO:0006082,GO:0006520,GO:0006566,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009088,GO:0009987,GO:0016053,GO:0016311,GO:0016829,GO:0016835,GO:0016838,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.3.1 4.7e-213 670.0
SYD3_k127_130872_13 Putative diguanylate phosphodiesterase - - - 2.413e-204 660.0
SYD3_k127_130872_14 Malonyl-CoA decarboxylase K01578 - 4.1.1.9 5.005e-196 619.0
SYD3_k127_130872_15 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 8.125e-195 616.0
SYD3_k127_130872_16 Aminotransferase class-III K03918,K07250,K20428 - 2.6.1.19,2.6.1.22,2.6.1.33,2.6.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009616 588.0
SYD3_k127_130872_17 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006065 554.0
SYD3_k127_130872_18 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749 GO:0003674,GO:0003824,GO:0008410,GO:0016740,GO:0016782,GO:0047369 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008467 530.0
SYD3_k127_130872_19 cytochrome c oxidase subunit III K02276 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003167 504.0
SYD3_k127_130872_2 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0022900,GO:0022904,GO:0034220,GO:0044237,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 1.9.3.1 4e-323 992.0
SYD3_k127_130872_20 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007354 542.0
SYD3_k127_130872_21 C-methyltransferase C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000784 499.0
SYD3_k127_130872_22 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 489.0
SYD3_k127_130872_23 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 478.0
SYD3_k127_130872_24 mandelate racemase muconate lactonizing K22209 - 4.2.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007997 462.0
SYD3_k127_130872_25 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 469.0
SYD3_k127_130872_26 Peptidase family M48 K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008233 456.0
SYD3_k127_130872_27 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 434.0
SYD3_k127_130872_28 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 431.0
SYD3_k127_130872_29 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 425.0
SYD3_k127_130872_3 Dehydratase family K01687 - 4.2.1.9 1.305e-285 886.0
SYD3_k127_130872_30 Branched-chain amino acid transport system permease K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006103 420.0
SYD3_k127_130872_31 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003684 416.0
SYD3_k127_130872_32 PFAM NAD-dependent epimerase dehydratase K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004387 415.0
SYD3_k127_130872_33 NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007677 390.0
SYD3_k127_130872_34 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006927 384.0
SYD3_k127_130872_35 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005129 383.0
SYD3_k127_130872_36 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004916 381.0
SYD3_k127_130872_37 Branched-chain amino acid transport K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005823 380.0
SYD3_k127_130872_38 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005142 374.0
SYD3_k127_130872_39 nucleoside-triphosphate diphosphatase activity K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000489 361.0
SYD3_k127_130872_4 TIGRFAM hopanoid biosynthesis associated RND transporter like protein HpnN K07003 - - 1.324e-257 820.0
SYD3_k127_130872_40 Peptidase C26 K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000078 360.0
SYD3_k127_130872_41 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 338.0
SYD3_k127_130872_42 helix_turn_helix, Lux Regulon - GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 332.0
SYD3_k127_130872_43 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 301.0
SYD3_k127_130872_44 Glycosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003418 299.0
SYD3_k127_130872_45 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 286.0
SYD3_k127_130872_46 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001394 281.0
SYD3_k127_130872_47 Invasion associated locus B (IalB) protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004196 272.0
SYD3_k127_130872_48 Belongs to the UPF0262 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004212 271.0
SYD3_k127_130872_49 COG1309 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001241 269.0
SYD3_k127_130872_5 Putative modulator of DNA gyrase K03568 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 3.082e-252 792.0
SYD3_k127_130872_50 Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I K02258 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006235 265.0
SYD3_k127_130872_51 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007063 273.0
SYD3_k127_130872_52 Transition state regulatory protein AbrB K07120 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001039 256.0
SYD3_k127_130872_53 Protein of unknown function (DUF3300) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000767 255.0
SYD3_k127_130872_54 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001449 245.0
SYD3_k127_130872_55 methionine sulfoxide reductase K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000004511 235.0
SYD3_k127_130872_56 SURF1 family K14998 - - 0.0000000000000000000000000000000000000000000000000000000000000000001608 238.0
SYD3_k127_130872_57 PAN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000871 226.0
SYD3_k127_130872_58 Lysylphosphatidylglycerol synthase TM region - - - 0.0000000000000000000000000000000000000000000000000000000000000008794 231.0
SYD3_k127_130872_59 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000242 226.0
SYD3_k127_130872_6 Belongs to the TPP enzyme family K01652 - 2.2.1.6 9.345e-247 773.0
SYD3_k127_130872_60 Low molecular weight phosphotyrosine protein phosphatase K01104,K03741 - 1.20.4.1,3.1.3.48 0.000000000000000000000000000000000000000000000000000000000000005041 220.0
SYD3_k127_130872_61 COG3090 TRAP-type C4-dicarboxylate transport system small permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000524 219.0
SYD3_k127_130872_62 - - - - 0.0000000000000000000000000000000000000000000000000000000002495 210.0
SYD3_k127_130872_63 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000003279 209.0
SYD3_k127_130872_64 transferase activity, transferring glycosyl groups K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000005607 206.0
SYD3_k127_130872_65 Oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000227 200.0
SYD3_k127_130872_66 Protein of unknown function (DUF2948) - - - 0.000000000000000000000000000000000000000000000000002579 191.0
SYD3_k127_130872_67 Protein of unknown function (DUF983) - - - 0.00000000000000000000000000000000000000000000000007794 180.0
SYD3_k127_130872_68 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.00000000000000000000000000000000000000000000000009345 181.0
SYD3_k127_130872_69 subfamily IA, variant 3 - - - 0.0000000000000000000000000000000000000000000000001117 186.0
SYD3_k127_130872_7 glutamate--cysteine ligase K01919 - 6.3.2.2 2.25e-238 742.0
SYD3_k127_130872_70 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.00000000000000000000000000000000000000000000007604 170.0
SYD3_k127_130872_71 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K03802,K05844 - 6.3.2.29,6.3.2.30 0.0000000000000000000000000000000000000000000004968 177.0
SYD3_k127_130872_72 (Lipo)protein K04754 - - 0.00000000000000000000000000000000000000000000942 173.0
SYD3_k127_130872_73 Diacylglycerol kinase catalytic domain - - - 0.00000000000000000000000000000000000000000001188 174.0
SYD3_k127_130872_74 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.00000000000000000000000000000000000000000001382 172.0
SYD3_k127_130872_75 Phosphorylase superfamily - - - 0.0000000000000000000000000000000000000000000216 171.0
SYD3_k127_130872_76 NUDIX domain - - - 0.000000000000000000000000000000000000000000031 168.0
SYD3_k127_130872_77 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01560,K07025,K20862 - 3.1.3.102,3.1.3.104,3.8.1.2 0.00000000000000000000000000000000000000000005778 169.0
SYD3_k127_130872_78 Bacterial extracellular solute-binding protein K02020,K22003 - 5.3.3.7 0.000000000000000000000000000000000000000002842 168.0
SYD3_k127_130872_79 - - - - 0.0000000000000000000000000000000000000001296 154.0
SYD3_k127_130872_8 Putative nucleotidyltransferase substrate binding domain K02342,K07182 - 2.7.7.7 9.295e-234 744.0
SYD3_k127_130872_80 Domain of unknown function (DUF4212) - - - 0.0000000000000000000000000000000000002452 143.0
SYD3_k127_130872_81 MlaC protein - - - 0.0000000000000000000000000000000000008345 149.0
SYD3_k127_130872_82 - - - - 0.000000000000000000000000000000000005574 146.0
SYD3_k127_130872_83 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000000000000000000007638 136.0
SYD3_k127_130872_84 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.0000000000000000000000000000000001297 136.0
SYD3_k127_130872_85 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis - - - 0.000000000000000000000000000002387 132.0
SYD3_k127_130872_86 - - - - 0.000000000000000000000000000009114 125.0
SYD3_k127_130872_87 - - - - 0.0000000000000000000000003912 108.0
SYD3_k127_130872_88 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.0000000000000000001297 89.0
SYD3_k127_130872_89 - - - - 0.000000000000000001688 95.0
SYD3_k127_130872_9 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 1.497e-225 707.0
SYD3_k127_130872_90 Inositol monophosphatase family - - - 0.00000000000000002815 83.0
SYD3_k127_130872_91 Mycolic acid cyclopropane synthetase - - - 0.0000000000000005919 88.0
SYD3_k127_130872_92 Domain of unknown function (DUF1127) - - - 0.0000000000005553 73.0
SYD3_k127_130872_93 - - - - 0.000000000003659 68.0
SYD3_k127_130872_94 - - - - 0.00000000003503 70.0
SYD3_k127_130872_95 Resolvase - - - 0.000000008282 57.0
SYD3_k127_132995_0 Pyridine nucleotide-disulphide oxidoreductase K00529,K18227,K18249 - 1.18.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005331 425.0
SYD3_k127_132995_1 Protein of unknown function (DUF3616) - - - 0.0000000000000000000002483 98.0
SYD3_k127_1366840_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 3.952e-288 907.0
SYD3_k127_1366840_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 500.0
SYD3_k127_1366840_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000007449 135.0
SYD3_k127_1377895_0 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K00479,K05708,K14748 - 1.14.12.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000553 353.0
SYD3_k127_1377895_1 aerobic-type carbon monoxide dehydrogenase, small subunit CoxS K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000008989 244.0
SYD3_k127_1377895_2 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.000000000000000003852 86.0
SYD3_k127_142053_0 helix_turn_helix gluconate operon transcriptional repressor K00375 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003774 288.0
SYD3_k127_142053_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005688 248.0
SYD3_k127_1442999_0 Diguanylate cyclase K13245 - 3.1.4.52 0.0 1511.0
SYD3_k127_1442999_1 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005493 457.0
SYD3_k127_1442999_2 Uncharacterized ACR, COG1678 K07735 - - 0.000000000000000000000000000000000000000000000000004377 181.0
SYD3_k127_1442999_3 Protein of unknown function (DUF1192) - - - 0.0000000000000001402 81.0
SYD3_k127_1457555_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 0.0 1007.0
SYD3_k127_1457555_1 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 9.613e-210 664.0
SYD3_k127_1457555_2 Protein of unknown function (DUF1015) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 571.0
SYD3_k127_1457555_3 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 362.0
SYD3_k127_1457555_4 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.000000000000002508 77.0
SYD3_k127_1457555_5 HflC and HflK could regulate a protease K04087 - - 0.00000008111 53.0
SYD3_k127_1544874_0 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000001352 203.0
SYD3_k127_1544874_1 Glyoxalase-like domain - - - 0.00006653 54.0
SYD3_k127_1552364_0 HlyD family secretion protein K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 416.0
SYD3_k127_1552364_1 PFAM ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 368.0
SYD3_k127_1552364_2 MacB-like periplasmic core domain K02004 - - 0.000000000001687 67.0
SYD3_k127_1552364_3 Hsp70 protein K04043 - - 0.00009822 47.0
SYD3_k127_15955_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.0 1055.0
SYD3_k127_15955_1 Apolipoprotein A1/A4/E domain - - - 1.148e-310 1000.0
SYD3_k127_15955_10 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.000000000000000000000000000000000000000000000000000000000000004328 225.0
SYD3_k127_15955_11 VWA domain containing CoxE-like protein K09989 - - 0.0000000000000000000000000000000000000000000000000000001799 197.0
SYD3_k127_15955_12 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.000000000000000000000000000000000000000000000000000001519 193.0
SYD3_k127_15955_13 - - - - 0.000000000000000000000000000000000000000001092 162.0
SYD3_k127_15955_14 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000004484 123.0
SYD3_k127_15955_15 Histidine kinase K07647 - 2.7.13.3 0.000000000000007388 81.0
SYD3_k127_15955_16 Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) - - - 0.00000001062 65.0
SYD3_k127_15955_2 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 455.0
SYD3_k127_15955_3 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 450.0
SYD3_k127_15955_4 mandelate racemase muconate lactonizing K19802 GO:0003674,GO:0003824,GO:0016853,GO:0016854,GO:0016855 5.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 428.0
SYD3_k127_15955_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 427.0
SYD3_k127_15955_6 Pyridoxal-phosphate dependent enzyme K01754 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006520,GO:0006563,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016841,GO:0016853,GO:0016854,GO:0016855,GO:0017144,GO:0018249,GO:0019538,GO:0019752,GO:0019842,GO:0030170,GO:0030378,GO:0030848,GO:0036094,GO:0036211,GO:0036361,GO:0042219,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046416,GO:0046437,GO:0046872,GO:0047661,GO:0048037,GO:0050662,GO:0070178,GO:0070179,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901607 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006323 407.0
SYD3_k127_15955_7 ATPases associated with a variety of cellular activities K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 388.0
SYD3_k127_15955_8 Nucleoside H+ symporter K05820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 294.0
SYD3_k127_15955_9 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000002384 259.0
SYD3_k127_1604049_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 595.0
SYD3_k127_1604049_1 MOSC N-terminal beta barrel domain K07140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 306.0
SYD3_k127_1613729_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007517 248.0
SYD3_k127_1613729_1 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.00000000002486 66.0
SYD3_k127_1664966_0 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K01784,K03274 - 5.1.3.2,5.1.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005492 471.0
SYD3_k127_1664966_1 heptosyltransferase K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 374.0
SYD3_k127_1664966_2 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000061 68.0
SYD3_k127_169251_0 Tannase and feruloyl esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006673 433.0
SYD3_k127_1706232_0 4Fe-4S binding domain - - - 8.257e-268 834.0
SYD3_k127_1706232_1 MoeA C-terminal region (domain IV) - - - 1.204e-241 763.0
SYD3_k127_1706232_10 MoeA domain protein domain I and II - - - 0.00000000000000000000000000000000000000000000000000000000000008453 227.0
SYD3_k127_1706232_11 sulfur carrier activity K04085 - - 0.0000000000000000000008118 97.0
SYD3_k127_1706232_12 - - - - 0.0000000000000004231 81.0
SYD3_k127_1706232_13 Endonuclease Exonuclease phosphatase - - - 0.0000000006816 69.0
SYD3_k127_1706232_2 WD domain, G-beta repeat K08738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751 599.0
SYD3_k127_1706232_3 amine oxidase K00274 - 1.4.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 451.0
SYD3_k127_1706232_4 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 384.0
SYD3_k127_1706232_5 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006866 341.0
SYD3_k127_1706232_6 TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000674 327.0
SYD3_k127_1706232_7 Nitroreductase family K19286 - 1.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008836 306.0
SYD3_k127_1706232_8 FecR protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004803 264.0
SYD3_k127_1706232_9 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000003941 254.0
SYD3_k127_1726515_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 1.023e-222 715.0
SYD3_k127_1726515_1 Nucleotidyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006012 574.0
SYD3_k127_1726515_10 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000001709 223.0
SYD3_k127_1726515_2 Hydrolase CocE NonD family K06978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 426.0
SYD3_k127_1726515_3 Acetamidase/Formamidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000485 355.0
SYD3_k127_1726515_4 KR domain K00065 - 1.1.1.127 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007227 337.0
SYD3_k127_1726515_5 Belongs to the binding-protein-dependent transport system permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008624 308.0
SYD3_k127_1726515_6 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001537 284.0
SYD3_k127_1726515_7 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005675 252.0
SYD3_k127_1726515_8 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000004952 250.0
SYD3_k127_1726515_9 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000005141 223.0
SYD3_k127_1749416_0 TonB dependent receptor K02014 - - 1.453e-198 642.0
SYD3_k127_1749416_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 357.0
SYD3_k127_1749416_2 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 351.0
SYD3_k127_1749416_3 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000000000000001616 124.0
SYD3_k127_1749416_4 - - - - 0.00000000000000000000000000003905 121.0
SYD3_k127_1780133_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0 1226.0
SYD3_k127_1780133_1 Cache domain - - - 0.0 1065.0
SYD3_k127_1780133_2 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 587.0
SYD3_k127_1780133_3 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 460.0
SYD3_k127_1780133_4 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001145 259.0
SYD3_k127_1780133_5 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005186 259.0
SYD3_k127_1780133_6 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046,K13797 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000005279 249.0
SYD3_k127_1780133_7 alpha-L-arabinofuranosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000207 257.0
SYD3_k127_1780133_8 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000004982 183.0
SYD3_k127_1780133_9 FecR protein - - - 0.0000000000000000000000000000000000000000000001339 195.0
SYD3_k127_1813199_0 Selenoprotein B, glycine betaine sarcosine D-proline reductase family K10672,K21579 - 1.21.4.2,1.21.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007321 294.0
SYD3_k127_1813199_1 PFAM Glycine sarcosine betaine reductase complex, protein B, alpha and beta subunits K10671 - 1.21.4.2 0.00000000000000000000006215 103.0
SYD3_k127_1813199_2 Glycine reductase complex component B subunit gamma K10672 - 1.21.4.2 0.00000000000000000004994 92.0
SYD3_k127_1845713_0 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01953 - 6.3.5.4 2.412e-254 800.0
SYD3_k127_1845713_1 UDP binding domain K02474 - - 5.383e-197 621.0
SYD3_k127_1845713_10 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006233 435.0
SYD3_k127_1845713_11 Transaldolase K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 381.0
SYD3_k127_1845713_12 Glycosyl transferase 4-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008379 385.0
SYD3_k127_1845713_13 Methionine biosynthesis protein MetW K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006494 367.0
SYD3_k127_1845713_14 Glycosyl transferase family 4 K02851,K13007 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003006 351.0
SYD3_k127_1845713_15 Nucleotidyl transferase K00966 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000485 319.0
SYD3_k127_1845713_16 Aminoglycoside phosphotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005726 308.0
SYD3_k127_1845713_17 ABC transporter K09691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003283 263.0
SYD3_k127_1845713_18 PFAM ABC-2 type transporter K01992,K09690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001125 254.0
SYD3_k127_1845713_19 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000007709 244.0
SYD3_k127_1845713_2 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710,K01784,K12450 - 4.2.1.46,4.2.1.76,5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 568.0
SYD3_k127_1845713_20 phosphoglycolate phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000009574 239.0
SYD3_k127_1845713_21 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000001815 171.0
SYD3_k127_1845713_22 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000716 157.0
SYD3_k127_1845713_23 Belongs to the mannose-6-phosphate isomerase type 2 family K00971,K16011 - 2.7.7.13,5.3.1.8 0.000000000000000000000000000000008641 127.0
SYD3_k127_1845713_3 Epimerase dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006118 539.0
SYD3_k127_1845713_4 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 531.0
SYD3_k127_1845713_5 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 522.0
SYD3_k127_1845713_6 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000042 508.0
SYD3_k127_1845713_7 Zinc-binding dehydrogenase K00001,K00121 - 1.1.1.1,1.1.1.284 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006583 504.0
SYD3_k127_1845713_8 Polysaccharide biosynthesis protein K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 503.0
SYD3_k127_1845713_9 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004297 494.0
SYD3_k127_197799_0 AcrB/AcrD/AcrF family K21134 - - 0.0 1483.0
SYD3_k127_197799_1 SMART Elongator protein 3 MiaB NifB - - - 1.248e-261 812.0
SYD3_k127_197799_10 PFAM ThiJ PfpI domain protein K18199 - 4.2.1.103 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008623 279.0
SYD3_k127_197799_11 Evidence Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K12262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001275 261.0
SYD3_k127_197799_12 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001018 254.0
SYD3_k127_197799_13 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009871 245.0
SYD3_k127_197799_14 ErfK YbiS YcfS YnhG - - - 0.0000000000000000000000000000000000000000000000000000000000000004882 227.0
SYD3_k127_197799_15 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000000000000000000000009577 212.0
SYD3_k127_197799_16 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.0000000000000000000000000000000000000000000000000000000003572 221.0
SYD3_k127_197799_17 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000001611 192.0
SYD3_k127_197799_18 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000007937 197.0
SYD3_k127_197799_19 Protein of unknown function, DUF - - - 0.0000000000000000000000000000000000000000000000006694 179.0
SYD3_k127_197799_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 3.313e-245 776.0
SYD3_k127_197799_20 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000006163 164.0
SYD3_k127_197799_21 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000003435 167.0
SYD3_k127_197799_22 - - - - 0.0000000000000000000000000000000007533 142.0
SYD3_k127_197799_23 motor activity - - - 0.000000000000000000000000000007541 125.0
SYD3_k127_197799_24 Protein of unknown function (DUF2721) - - - 0.0000000000000000000000000003708 119.0
SYD3_k127_197799_26 - - - - 0.0000000000000000000000001756 110.0
SYD3_k127_197799_27 sh3 domain protein K01447,K01448,K09774 - 3.5.1.28 0.00000000000000000000005197 111.0
SYD3_k127_197799_28 - - - - 0.00000000000000000000005391 110.0
SYD3_k127_197799_29 Membrane-bound lysozyme-inhibitor of c-type lysozyme - - - 0.000000000000000000000794 99.0
SYD3_k127_197799_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 498.0
SYD3_k127_197799_30 Short repeat of unknown function (DUF308) - - - 0.00000000000000000000377 101.0
SYD3_k127_197799_32 - - - - 0.00000000346 61.0
SYD3_k127_197799_33 Chromophore maturation protein PvdO - - - 0.00000000466 61.0
SYD3_k127_197799_4 Adenylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 387.0
SYD3_k127_197799_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000388 351.0
SYD3_k127_197799_6 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 348.0
SYD3_k127_197799_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000319 348.0
SYD3_k127_197799_8 Sulfatase K01130 - 3.1.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006311 319.0
SYD3_k127_197799_9 MgtC family K07507 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009898 295.0
SYD3_k127_2013444_0 Histidine kinase - - - 0.00000000000000000000000000000001672 135.0
SYD3_k127_2013444_1 In Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media - - - 0.00000000000008456 72.0
SYD3_k127_2031445_0 pyruvate phosphate dikinase K01006 - 2.7.9.1 0.0 1473.0
SYD3_k127_2031445_1 Required for chromosome condensation and partitioning K03529 - - 0.0 1355.0
SYD3_k127_2031445_10 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004375 582.0
SYD3_k127_2031445_11 Belongs to the FPP GGPP synthase family K02523 GO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009108,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0042180,GO:0042181,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901615,GO:1901617,GO:1901661,GO:1901663 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 529.0
SYD3_k127_2031445_12 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 535.0
SYD3_k127_2031445_13 Zinc-binding dehydrogenase K19745 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 498.0
SYD3_k127_2031445_14 Cytochrome bd terminal oxidase subunit II K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003927 481.0
SYD3_k127_2031445_15 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 490.0
SYD3_k127_2031445_16 a g-specific adenine glycosylase K03575 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008969 470.0
SYD3_k127_2031445_17 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 447.0
SYD3_k127_2031445_18 Predicted membrane protein (DUF2207) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008894 458.0
SYD3_k127_2031445_19 Cell Wall Hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006805 410.0
SYD3_k127_2031445_2 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0 1040.0
SYD3_k127_2031445_20 Putative neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 400.0
SYD3_k127_2031445_21 Peptidase family S49 K04773,K04774 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003854 362.0
SYD3_k127_2031445_22 UreE urease accessory protein, C-terminal domain K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005106 358.0
SYD3_k127_2031445_23 Belongs to the GcvT family K06980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000059 343.0
SYD3_k127_2031445_24 MarR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 334.0
SYD3_k127_2031445_25 glycosylase i K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 321.0
SYD3_k127_2031445_26 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 317.0
SYD3_k127_2031445_27 May be involved in the biosynthesis of molybdopterin K03638 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0042802,GO:0044424,GO:0044444,GO:0044464 2.7.7.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 300.0
SYD3_k127_2031445_28 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002896 299.0
SYD3_k127_2031445_29 Metal dependent phosphohydrolases with conserved 'HD' motif. K06952 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 294.0
SYD3_k127_2031445_3 electron transfer K00311 GO:0003674,GO:0003824,GO:0004174,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016645,GO:0016649,GO:0016722,GO:0017133,GO:0019866,GO:0022900,GO:0022904,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032592,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043783,GO:0044237,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045251,GO:0045333,GO:0048037,GO:0048038,GO:0048039,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070013,GO:0098573,GO:0098798,GO:1902494,GO:1990204 1.5.5.1 8.777e-277 859.0
SYD3_k127_2031445_30 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 286.0
SYD3_k127_2031445_31 GHMP kinases N terminal domain K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005199 287.0
SYD3_k127_2031445_32 Methyltransferase small domain K15460 - 2.1.1.223 0.0000000000000000000000000000000000000000000000000000000000000000003075 239.0
SYD3_k127_2031445_33 COG1651 protein-disulfide isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000001553 235.0
SYD3_k127_2031445_34 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000008004 231.0
SYD3_k127_2031445_35 protein tyrosine phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000002193 221.0
SYD3_k127_2031445_36 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000002455 228.0
SYD3_k127_2031445_37 Domain of unknown function (DUF892) - - - 0.00000000000000000000000000000000000000000000000000000000001451 213.0
SYD3_k127_2031445_38 Protein of unknown function (DUF721) - - - 0.0000000000000000000000000000000000000000000000000009022 190.0
SYD3_k127_2031445_39 Protein of unknown function (DUF2385) - - - 0.0000000000000000000000000000000000000000000000000009473 186.0
SYD3_k127_2031445_4 Tetratricopeptide repeat - - - 1.097e-243 765.0
SYD3_k127_2031445_40 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000000004246 180.0
SYD3_k127_2031445_41 SOS response associated peptidase (SRAP) - - - 0.0000000000000000000000000000000000000000000000003747 177.0
SYD3_k127_2031445_42 protein possibly involved in aromatic compounds catabolism - - - 0.0000000000000000000000000000000000000000000024 167.0
SYD3_k127_2031445_43 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000000000001072 164.0
SYD3_k127_2031445_44 NUDIX domain - - - 0.00000000000000000000000000000000000000000001086 172.0
SYD3_k127_2031445_45 - - - - 0.0000000000000000000000000000000000000000000368 165.0
SYD3_k127_2031445_46 COG0346 Lactoylglutathione lyase and related lyases K07032 - - 0.0000000000000000000000000000000000000000004388 162.0
SYD3_k127_2031445_47 - - - - 0.000000000000000000000000000000000000000439 154.0
SYD3_k127_2031445_48 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.00000000000000000000000000000000001068 143.0
SYD3_k127_2031445_49 - - - - 0.0000000000000000000000000000172 120.0
SYD3_k127_2031445_5 Amidohydrolase family K01465 - 3.5.2.3 1.553e-225 722.0
SYD3_k127_2031445_50 Putative prokaryotic signal transducing protein - - - 0.000000000000000000000000001916 113.0
SYD3_k127_2031445_51 - - - - 0.00000000000000000000001143 109.0
SYD3_k127_2031445_52 - - - - 0.00000000001245 66.0
SYD3_k127_2031445_53 Protein of unknown function (DUF3096) - - - 0.0000000001114 63.0
SYD3_k127_2031445_54 - - - - 0.0000000009315 62.0
SYD3_k127_2031445_55 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000001501 58.0
SYD3_k127_2031445_6 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 2.127e-210 662.0
SYD3_k127_2031445_7 PFAM Xanthine uracil vitamin C permease K06901 - - 1.063e-207 653.0
SYD3_k127_2031445_8 Elongator protein 3, MiaB family, Radical SAM - - - 2.307e-197 621.0
SYD3_k127_2031445_9 Belongs to the N(4) N(6)-methyltransferase family K13581 - 2.1.1.72 6.413e-196 615.0
SYD3_k127_2051952_0 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 478.0
SYD3_k127_2051952_1 Protein of unknown function (DUF3422) - - - 0.00000000000000000000000000485 111.0
SYD3_k127_2088719_0 Thiamine pyrophosphate enzyme, central domain K03852 - 2.3.3.15 0.0 1097.0
SYD3_k127_2088719_1 TIGRFAM cytochrome c oxidase, cbb3-type, subunit I K00404 GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0022900,GO:0022904,GO:0034220,GO:0044237,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 1.9.3.1 4.98e-321 987.0
SYD3_k127_2088719_10 Amidase K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000237 511.0
SYD3_k127_2088719_11 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005819 516.0
SYD3_k127_2088719_12 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008152 498.0
SYD3_k127_2088719_13 Autotransporter beta-domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 506.0
SYD3_k127_2088719_14 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999,K11959 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008883 431.0
SYD3_k127_2088719_15 phosphate acetyltransferase K00625 - 2.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 424.0
SYD3_k127_2088719_16 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007491 420.0
SYD3_k127_2088719_17 PFAM cytochrome C oxidase mono-heme subunit FixO K00405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004692 415.0
SYD3_k127_2088719_18 Branched-chain amino acid transport system permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 409.0
SYD3_k127_2088719_19 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004393 402.0
SYD3_k127_2088719_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533 GO:0003674,GO:0003824,GO:0005215,GO:0005388,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0008150,GO:0008324,GO:0015075,GO:0015085,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0070588,GO:0070838,GO:0071944,GO:0072511,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.4 7.798e-277 868.0
SYD3_k127_2088719_20 Conserved hypothetical protein 698 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 399.0
SYD3_k127_2088719_21 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 381.0
SYD3_k127_2088719_22 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 357.0
SYD3_k127_2088719_23 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 311.0
SYD3_k127_2088719_24 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 308.0
SYD3_k127_2088719_25 branched-chain amino acid K01995,K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 310.0
SYD3_k127_2088719_26 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K13039 - 4.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 299.0
SYD3_k127_2088719_27 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008159 293.0
SYD3_k127_2088719_28 Crp Fnr family K01420,K15861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008122 269.0
SYD3_k127_2088719_29 CBS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001516 264.0
SYD3_k127_2088719_3 Tripartite tricarboxylate transporter TctA family K07793 - - 2.203e-264 820.0
SYD3_k127_2088719_30 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006921 266.0
SYD3_k127_2088719_31 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K06034 - 4.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000008827 259.0
SYD3_k127_2088719_32 response regulator K14987 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007666 248.0
SYD3_k127_2088719_33 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001331 233.0
SYD3_k127_2088719_34 Hsp20/alpha crystallin family K13993 - - 0.000000000000000000000000000000000000000000000000000000000003791 211.0
SYD3_k127_2088719_35 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01856,K01860,K19802 - 5.1.1.20,5.5.1.1,5.5.1.7 0.000000000000000000000000000000000000000000000000000000003689 213.0
SYD3_k127_2088719_36 Bacterial transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000006733 208.0
SYD3_k127_2088719_37 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000001219 177.0
SYD3_k127_2088719_38 FixH - - - 0.00000000000000000000000000000000003615 143.0
SYD3_k127_2088719_39 Cbb3-type cytochrome oxidase component FixQ K00407 - - 0.0000000000000001204 82.0
SYD3_k127_2088719_4 TIGRFAM cytochrome c oxidase accessory protein - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 5.588e-224 707.0
SYD3_k127_2088719_40 Cytochrome oxidase maturation protein cbb3-type - - - 0.000000000000007394 83.0
SYD3_k127_2088719_5 Belongs to the citrate synthase family K01647,K01659 - 2.3.3.1,2.3.3.5 2.026e-203 637.0
SYD3_k127_2088719_6 Aldehyde dehydrogenase family K13922,K15515 - 1.2.1.81,1.2.1.87 2.485e-203 643.0
SYD3_k127_2088719_7 Histidine kinase K14986 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 561.0
SYD3_k127_2088719_8 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006024 518.0
SYD3_k127_2088719_9 Belongs to the succinate malate CoA ligase beta subunit family K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 518.0
SYD3_k127_2166071_0 Transposase domain (DUF772) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005767 492.0
SYD3_k127_216934_0 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 2.024e-227 709.0
SYD3_k127_216934_1 Iron-sulfur cluster-binding domain - - - 1.795e-199 627.0
SYD3_k127_216934_2 Glycosyltransferase family 87 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004773 601.0
SYD3_k127_216934_3 Phosphorylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003997 457.0
SYD3_k127_216934_4 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005726 366.0
SYD3_k127_2189866_0 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 1.1e-253 790.0
SYD3_k127_2233190_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000002631 222.0
SYD3_k127_233121_0 PEP-utilising enzyme, N-terminal K08484 - 2.7.3.9 0.0 1179.0
SYD3_k127_233121_1 Belongs to the aspartokinase family K00928 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.4 7.178e-208 656.0
SYD3_k127_233121_2 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004255 342.0
SYD3_k127_2376869_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005524 419.0
SYD3_k127_2408644_0 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 1.048e-271 843.0
SYD3_k127_2408644_1 NMT1-like family K15576 - - 8.063e-254 788.0
SYD3_k127_2408644_10 nitrate ABC transporter K02050,K15577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 473.0
SYD3_k127_2408644_11 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 451.0
SYD3_k127_2408644_12 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005112 444.0
SYD3_k127_2408644_13 Peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004353 373.0
SYD3_k127_2408644_14 Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide K01725 - 4.2.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001836 273.0
SYD3_k127_2408644_15 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.00000000000000000000000000000000000000000000000000000000000000001197 235.0
SYD3_k127_2408644_16 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000007774 181.0
SYD3_k127_2408644_17 Sterol carrier protein - - - 0.000000000000000000000000000000005962 134.0
SYD3_k127_2408644_18 OmpA-like transmembrane domain K16079 - - 0.000000000000000000000000000002133 130.0
SYD3_k127_2408644_19 SOS response K14160 - - 0.0000000000000000000000000002451 124.0
SYD3_k127_2408644_2 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 5.371e-227 711.0
SYD3_k127_2408644_20 - - - - 0.000000000000000000002248 94.0
SYD3_k127_2408644_21 - - - - 0.000000000000000001601 93.0
SYD3_k127_2408644_22 PilZ domain - - - 0.0000000000003194 72.0
SYD3_k127_2408644_23 - - - - 0.0000000000004387 71.0
SYD3_k127_2408644_3 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 1.872e-224 703.0
SYD3_k127_2408644_4 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 2.23e-209 655.0
SYD3_k127_2408644_5 Protein of unknown function (DUF3422) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 582.0
SYD3_k127_2408644_6 OsmC-like protein K06889,K07397 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007584 554.0
SYD3_k127_2408644_7 FMN-dependent dehydrogenase K00101 - 1.1.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009551 520.0
SYD3_k127_2408644_8 ATPases associated with a variety of cellular activities K02049,K15578 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 489.0
SYD3_k127_2408644_9 Sigma-70 factor, region 1.2 K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004835 488.0
SYD3_k127_2470004_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004344 587.0
SYD3_k127_2470004_1 Nitrile hydratase, alpha chain K01721 - 4.2.1.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 376.0
SYD3_k127_2470004_10 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.00000000000000000000000000003992 120.0
SYD3_k127_2470004_2 Belongs to the NiCoT transporter (TC 2.A.52) family K08970 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 346.0
SYD3_k127_2470004_3 NHase catalyzes the hydration of various nitrile compounds to the corresponding amides K20807 - 4.2.1.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005052 334.0
SYD3_k127_2470004_4 KR domain K00065 - 1.1.1.127 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002459 284.0
SYD3_k127_2470004_5 Nitrile hydratase beta subunit - - - 0.000000000000000000000000000000000000000000000000000000000003472 214.0
SYD3_k127_2470004_6 Protein of unknown function (DUF1007) - - - 0.000000000000000000000000000000000000000000000007812 175.0
SYD3_k127_2470004_7 MAPEG family - - - 0.00000000000000000000000000000000000000000008095 163.0
SYD3_k127_2470004_8 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.000000000000000000000000000000000000000008363 163.0
SYD3_k127_2470004_9 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000000000000004428 145.0
SYD3_k127_2472612_0 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004522 561.0
SYD3_k127_2472612_1 Peptidase family S58 K01266 - 3.4.11.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006866 460.0
SYD3_k127_2472612_2 PFAM ABC transporter K01995,K15783 GO:0003333,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0015711,GO:0015803,GO:0015804,GO:0015807,GO:0015808,GO:0015818,GO:0015829,GO:0015849,GO:0015893,GO:0032328,GO:0034220,GO:0042221,GO:0042493,GO:0042940,GO:0042941,GO:0043090,GO:0046942,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0089718,GO:0098655,GO:0098656,GO:0098657,GO:0098739,GO:1902475,GO:1903714,GO:1903785,GO:1903805,GO:1903806,GO:1903825,GO:1905039 3.5.4.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 427.0
SYD3_k127_2472612_3 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 385.0
SYD3_k127_2472612_4 cytochrome c biogenesis protein K06196 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006273 331.0
SYD3_k127_2472612_5 Domain of unknown function (DUF3382) K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007538 274.0
SYD3_k127_2472612_6 - - - - 0.0000000000000000000000000000002815 126.0
SYD3_k127_2472612_7 KTSC domain - - - 0.000000005688 62.0
SYD3_k127_250866_0 Glycine zipper 2TM domain - - - 0.00000000000000000000000000005341 123.0
SYD3_k127_2519964_0 Elongator protein 3, MiaB family, Radical SAM K11779 - 2.5.1.77 0.0 1163.0
SYD3_k127_2519964_1 Pyridoxal-phosphate dependent enzyme - - - 3.096e-236 739.0
SYD3_k127_2519964_10 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009694 361.0
SYD3_k127_2519964_11 F420-0:Gamma-glutamyl ligase K12234 - 6.3.2.31,6.3.2.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006605 332.0
SYD3_k127_2519964_12 ATPases associated with a variety of cellular activities K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 321.0
SYD3_k127_2519964_13 COG1541 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009153 316.0
SYD3_k127_2519964_14 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006964 273.0
SYD3_k127_2519964_15 Guanylyl transferase CofC like K14941 - 2.7.7.68 0.0000000000000000000000000000000000000000000001126 179.0
SYD3_k127_2519964_16 coenzyme F420-1:gamma-L-glutamate ligase activity - - - 0.000000000000000000000000000000000000002592 150.0
SYD3_k127_2519964_17 - - - - 0.00000000000000003246 85.0
SYD3_k127_2519964_2 Serine dehydratase beta chain K01752 GO:0003674,GO:0003824,GO:0003941,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009987,GO:0016054,GO:0016829,GO:0016840,GO:0016841,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901575 4.3.1.17 2.836e-194 615.0
SYD3_k127_2519964_3 Receptor family ligand binding region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 578.0
SYD3_k127_2519964_4 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 531.0
SYD3_k127_2519964_5 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002617 529.0
SYD3_k127_2519964_6 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 464.0
SYD3_k127_2519964_7 Acyl CoA acetate 3-ketoacid CoA transferase beta subunit K01040 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003664 442.0
SYD3_k127_2519964_8 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 436.0
SYD3_k127_2519964_9 LPPG Fo 2-phospho-L-lactate transferase K11212 - 2.7.8.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004993 398.0
SYD3_k127_259244_0 Formate dehydrogenase, alpha subunit K00123 - 1.17.1.9 0.0 1443.0
SYD3_k127_259244_1 Belongs to the TPP enzyme family K01577,K01652 - 2.2.1.6,4.1.1.8 0.0 1053.0
SYD3_k127_259244_10 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 2.276e-228 722.0
SYD3_k127_259244_11 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01581 - 4.1.1.17 4.226e-205 642.0
SYD3_k127_259244_12 cobalamin synthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 574.0
SYD3_k127_259244_13 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008332 523.0
SYD3_k127_259244_14 Formyl transferase, C-terminal domain K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 505.0
SYD3_k127_259244_15 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 501.0
SYD3_k127_259244_16 NMT1-like family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 464.0
SYD3_k127_259244_17 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 444.0
SYD3_k127_259244_18 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006034 441.0
SYD3_k127_259244_19 Anaphase-promoting complex subunit 4 WD40 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 411.0
SYD3_k127_259244_2 COG0339 Zn-dependent oligopeptidases K01284 GO:0003674,GO:0003824,GO:0004180,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0016787,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.15.5 1.355e-295 922.0
SYD3_k127_259244_20 ABC 3 transport family K02075 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000587 374.0
SYD3_k127_259244_21 AAA domain, putative AbiEii toxin, Type IV TA system K02074,K09817 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 361.0
SYD3_k127_259244_22 Zinc-uptake complex component A periplasmic K02077 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 315.0
SYD3_k127_259244_23 FCD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008164 312.0
SYD3_k127_259244_24 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 317.0
SYD3_k127_259244_25 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 301.0
SYD3_k127_259244_26 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001052 292.0
SYD3_k127_259244_27 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000004846 205.0
SYD3_k127_259244_28 Predicted permease - - - 0.00000000000000000000000000000000000000000000000000001033 196.0
SYD3_k127_259244_29 Predicted permease - - - 0.00000000000000000000000000000000000000000000000003575 188.0
SYD3_k127_259244_3 Tripartite ATP-independent periplasmic transporter, DctM component - - - 6.504e-292 913.0
SYD3_k127_259244_30 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.000000000000000000000000000000000000000002276 159.0
SYD3_k127_259244_31 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K20444 - - 0.000000000000000000000000000000000000000004675 174.0
SYD3_k127_259244_32 Protein of unknown function (DUF1007) - - - 0.000000000000000000000000000000000000000006647 156.0
SYD3_k127_259244_33 Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000005531 126.0
SYD3_k127_259244_34 - - - - 0.0000000000000000000345 94.0
SYD3_k127_259244_36 protein conserved in bacteria K01876 - 6.1.1.12 0.0005002 48.0
SYD3_k127_259244_4 Formate--tetrahydrofolate ligase K01938 - 6.3.4.3 3.095e-290 899.0
SYD3_k127_259244_5 Class II Aldolase and Adducin N-terminal domain - - - 8.415e-267 838.0
SYD3_k127_259244_6 Homospermidine synthase K00808 - 2.5.1.44 4.142e-265 821.0
SYD3_k127_259244_7 COG1905 NADH ubiquinone oxidoreductase 24 kD subunit - - - 9.264e-264 823.0
SYD3_k127_259244_8 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 8.283e-246 769.0
SYD3_k127_259244_9 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate K07749 - 2.8.3.16 1.596e-228 717.0
SYD3_k127_2745196_0 AAA C-terminal domain K07478 GO:0005575,GO:0005622,GO:0005623,GO:0005657,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0030894,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901576 - 1.276e-235 735.0
SYD3_k127_2745196_1 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006508,GO:0006515,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0009987,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030163,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051603,GO:0061077,GO:0070011,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.21.107 4.468e-208 655.0
SYD3_k127_2745196_2 Responsible for synthesis of pseudouridine from uracil K06179 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006045 521.0
SYD3_k127_2745196_3 Cytochrome c - - - 0.000000000000000000000000000000000172 135.0
SYD3_k127_2745196_4 Cytochrome c - - - 0.00000000001411 69.0
SYD3_k127_2754659_0 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000000000000000000006109 168.0
SYD3_k127_2754659_1 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000008092 146.0
SYD3_k127_2754659_2 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000005537 86.0
SYD3_k127_2758506_0 NADH dehydrogenase (ubiquinone) activity K14089 - - 2.376e-236 739.0
SYD3_k127_2758506_1 Proton-conducting membrane transporter K12141 GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0033554,GO:0044425,GO:0044464,GO:0050896,GO:0051716,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006301 437.0
SYD3_k127_2765126_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000000000000000000000000000009501 142.0
SYD3_k127_2765126_1 Zinc-binding dehydrogenase K13953 - 1.1.1.1 0.000000000000000000000000000000005707 134.0
SYD3_k127_2833699_0 Alanine racemase, N-terminal domain K21898 - 5.1.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 385.0
SYD3_k127_2833699_1 B12 binding domain K01846 - 5.4.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003305 301.0
SYD3_k127_2833699_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000001425 109.0
SYD3_k127_2847131_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1922.0
SYD3_k127_2847131_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1155.0
SYD3_k127_2847131_10 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003965 341.0
SYD3_k127_2847131_11 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003034 312.0
SYD3_k127_2847131_12 Bacterial dnaA protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006665 273.0
SYD3_k127_2847131_13 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007149 268.0
SYD3_k127_2847131_14 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000001497 247.0
SYD3_k127_2847131_15 CDP-alcohol phosphatidyltransferase K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000008497 229.0
SYD3_k127_2847131_16 - - - - 0.00000000000000000000000000000000000000000000000014 179.0
SYD3_k127_2847131_17 - - - - 0.00000000000000000000000000000000000000000006525 168.0
SYD3_k127_2847131_18 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000000000006031 159.0
SYD3_k127_2847131_19 DoxX K15977 - - 0.00000000000000000000000000001601 123.0
SYD3_k127_2847131_2 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1009.0
SYD3_k127_2847131_20 PilZ domain - - - 0.000000000000000000000000004225 114.0
SYD3_k127_2847131_21 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0000000000000000000000003922 104.0
SYD3_k127_2847131_22 - - - - 0.000000000000000000000001652 109.0
SYD3_k127_2847131_23 - - - - 0.000000000000001192 80.0
SYD3_k127_2847131_24 - - - - 0.000000000007444 70.0
SYD3_k127_2847131_25 Response regulator receiver - - - 0.00000003567 64.0
SYD3_k127_2847131_26 - - - - 0.00002387 48.0
SYD3_k127_2847131_3 Belongs to the TPP enzyme family K01652 - 2.2.1.6 4.411e-215 681.0
SYD3_k127_2847131_4 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 4.384e-210 664.0
SYD3_k127_2847131_5 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 595.0
SYD3_k127_2847131_6 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006023 529.0
SYD3_k127_2847131_7 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 422.0
SYD3_k127_2847131_8 AI-2E family transporter K03548 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 418.0
SYD3_k127_2847131_9 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005947 364.0
SYD3_k127_2862863_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 5.205e-248 775.0
SYD3_k127_2862863_1 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 2.155e-229 717.0
SYD3_k127_2862863_10 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 296.0
SYD3_k127_2862863_11 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002552 273.0
SYD3_k127_2862863_12 Phytoene squalene synthetase K02291,K18163 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000007351 254.0
SYD3_k127_2862863_13 PFAM MaoC domain protein dehydratase K17865 GO:0003674,GO:0003824,GO:0003859,GO:0006081,GO:0006082,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044281,GO:0046487,GO:0071704 4.2.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000003023 245.0
SYD3_k127_2862863_14 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.000000000000000000000000000000000000000000000000000000000000000000003472 246.0
SYD3_k127_2862863_15 Preprotein translocase subunit K03210 - - 0.000000000000000000000000000000000000000000000006227 180.0
SYD3_k127_2862863_16 Protein of unknown function (DUF498/DUF598) - - - 0.00000000000000000000000000000000000000001104 156.0
SYD3_k127_2862863_17 Response regulator receiver - - - 0.000000000000000000000000000000000001004 143.0
SYD3_k127_2862863_18 GCN5-related N-acetyl-transferase K06975 - - 0.0000000000000000000000000006318 115.0
SYD3_k127_2862863_19 ABC transporter substrate binding protein K01989 - - 0.000000000000000000001925 96.0
SYD3_k127_2862863_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 8.481e-202 635.0
SYD3_k127_2862863_20 ABC transporter substrate binding protein K01989 - - 0.0000000000000001115 84.0
SYD3_k127_2862863_22 Domain of unknown function (DUF1127) - - - 0.00000000119 60.0
SYD3_k127_2862863_23 Penicillin-Binding Protein C-terminus Family K05367 - 2.4.1.129 0.000601 43.0
SYD3_k127_2862863_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 505.0
SYD3_k127_2862863_4 ATPase (AAA) K06923 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005561 453.0
SYD3_k127_2862863_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 412.0
SYD3_k127_2862863_6 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 413.0
SYD3_k127_2862863_7 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007116 380.0
SYD3_k127_2862863_8 Lysin motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 350.0
SYD3_k127_2862863_9 Peptidase M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 302.0
SYD3_k127_2902036_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370 - 1.7.5.1 0.0 2328.0
SYD3_k127_2902036_1 Major Facilitator Superfamily K02575 - - 0.0 1565.0
SYD3_k127_2902036_10 Acts as a magnesium transporter K06213 - - 1.98e-197 627.0
SYD3_k127_2902036_11 Sulfide dehydrogenase K17218,K17229 - 1.8.2.3,1.8.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 597.0
SYD3_k127_2902036_12 Transglycosylase SLT domain K00786,K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 538.0
SYD3_k127_2902036_13 Cytochrome c K17230 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 533.0
SYD3_k127_2902036_14 4,5-dihydroxyphthalate decarboxylase K04102 - 4.1.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006061 499.0
SYD3_k127_2902036_15 lysine 2,3-aminomutase K01843 - 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004836 493.0
SYD3_k127_2902036_16 tRNA synthetases class II (D, K and N) K04568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 484.0
SYD3_k127_2902036_17 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000784 462.0
SYD3_k127_2902036_18 nitrate reductase, gamma subunit K00374 - 1.7.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003451 411.0
SYD3_k127_2902036_19 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002443 402.0
SYD3_k127_2902036_2 Biotin carboxylase C-terminal domain K01965 GO:0003674,GO:0003824,GO:0004658,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009374,GO:0009987,GO:0016421,GO:0016874,GO:0016885,GO:0017144,GO:0019752,GO:0019842,GO:0019899,GO:0031406,GO:0031974,GO:0032787,GO:0033218,GO:0033293,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0070013,GO:0071704,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901681 6.4.1.3 1.312e-320 992.0
SYD3_k127_2902036_20 Belongs to the sirtuin family. Class K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007662 392.0
SYD3_k127_2902036_21 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006763 382.0
SYD3_k127_2902036_22 ABC transporter K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 378.0
SYD3_k127_2902036_23 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007073 362.0
SYD3_k127_2902036_24 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 357.0
SYD3_k127_2902036_25 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004381 349.0
SYD3_k127_2902036_26 4,5-dihydroxyphthalate decarboxylase K04102 - 4.1.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000474 353.0
SYD3_k127_2902036_27 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 340.0
SYD3_k127_2902036_28 Cold shock protein domain K03704 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004994 332.0
SYD3_k127_2902036_29 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003035 332.0
SYD3_k127_2902036_3 Nitrate reductase beta subunit K00371 - 1.7.5.1 4.02e-312 962.0
SYD3_k127_2902036_30 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006905 329.0
SYD3_k127_2902036_31 Bacterial protein of unknown function (DUF899) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 318.0
SYD3_k127_2902036_32 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 325.0
SYD3_k127_2902036_33 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007239 315.0
SYD3_k127_2902036_34 Iron permease FTR1 family K07243 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 305.0
SYD3_k127_2902036_35 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000576 306.0
SYD3_k127_2902036_36 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 304.0
SYD3_k127_2902036_37 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005034 317.0
SYD3_k127_2902036_38 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 300.0
SYD3_k127_2902036_39 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000695 288.0
SYD3_k127_2902036_4 Belongs to the 5'-nucleotidase family K17224 - - 1.662e-282 876.0
SYD3_k127_2902036_40 DUF218 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001002 281.0
SYD3_k127_2902036_41 Cytochrome C K08738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002541 276.0
SYD3_k127_2902036_42 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007199 277.0
SYD3_k127_2902036_43 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002259 258.0
SYD3_k127_2902036_44 Nitrate reductase delta subunit K00373 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001055 259.0
SYD3_k127_2902036_45 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 GO:0003674,GO:0003824,GO:0004462,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016846,GO:0034641,GO:0043603,GO:0044237,GO:0051186,GO:0071704,GO:1901564 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000001902 249.0
SYD3_k127_2902036_46 WD40 repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006276 263.0
SYD3_k127_2902036_47 Thioredoxin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004086 231.0
SYD3_k127_2902036_48 Bacterial extracellular solute-binding protein K22003 - 5.3.3.7 0.00000000000000000000000000000000000000000000000000000000000007652 220.0
SYD3_k127_2902036_49 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000000000000001408 218.0
SYD3_k127_2902036_5 Thiamine pyrophosphate enzyme, central domain - - - 1.886e-235 743.0
SYD3_k127_2902036_50 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000000000000000000000000000002336 185.0
SYD3_k127_2902036_51 Sulphur oxidation protein SoxZ K17227 - - 0.00000000000000000000000000000000000000000000000004819 179.0
SYD3_k127_2902036_52 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000001737 187.0
SYD3_k127_2902036_53 Sulfur oxidation protein SoxY K17226 - - 0.0000000000000000000000000000000000000000000000003129 180.0
SYD3_k127_2902036_54 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000009222 168.0
SYD3_k127_2902036_55 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000000000000000000000001666 162.0
SYD3_k127_2902036_56 Carboxyl transferase domain K01966 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016421,GO:0016874,GO:0016885,GO:0019752,GO:0031974,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0070013,GO:0071704,GO:0072329,GO:1901575 2.1.3.15,6.4.1.3 0.000000000000000000000000000000000000000001969 156.0
SYD3_k127_2902036_57 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000002765 169.0
SYD3_k127_2902036_58 PFAM regulatory protein ArsR - GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000001378 147.0
SYD3_k127_2902036_59 Regulatory protein SoxS - - - 0.00000000000000000000000000000000147 134.0
SYD3_k127_2902036_6 Aldehyde dehydrogenase family K00130 - 1.2.1.8 3.266e-221 696.0
SYD3_k127_2902036_60 PFAM AIG2 family protein - - - 0.00000000000000000000000000000001613 131.0
SYD3_k127_2902036_61 Type III flagellar switch regulator (C-ring) FliN C-term K02417 - - 0.0000000000000000000000000000005692 123.0
SYD3_k127_2902036_62 Cupredoxin-like domain - - - 0.0000000000000000000000000005806 122.0
SYD3_k127_2902036_63 transcriptional regulator, XRE family K07726 - - 0.00000000000000000000000003413 110.0
SYD3_k127_2902036_64 - - - - 0.00000000000000000000000005144 117.0
SYD3_k127_2902036_65 Acylphosphatase K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.0000000000000000001198 92.0
SYD3_k127_2902036_66 cytochrome - - - 0.00000000000000001013 87.0
SYD3_k127_2902036_67 - - - - 0.000000000000003352 81.0
SYD3_k127_2902036_68 Alpha/beta hydrolase family K06889 - - 0.0002762 46.0
SYD3_k127_2902036_69 - - - - 0.0007365 43.0
SYD3_k127_2902036_7 Mo-co oxidoreductase dimerisation domain K17225 - - 1.128e-217 681.0
SYD3_k127_2902036_8 Acyl-CoA dehydrogenase, middle domain K00253 - 1.3.8.4 8.422e-216 674.0
SYD3_k127_2902036_9 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 3.453e-200 645.0
SYD3_k127_2959188_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 586.0
SYD3_k127_2961707_0 CHASE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 492.0
SYD3_k127_2961707_1 Proteasome-type protease K07395 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 412.0
SYD3_k127_2961707_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007297 379.0
SYD3_k127_2961707_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 360.0
SYD3_k127_2961707_4 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005679 335.0
SYD3_k127_2961707_5 Acts on guanine, xanthine and to a lesser extent hypoxanthine K00769 - 2.4.2.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001323 278.0
SYD3_k127_2961707_6 ChrR Cupin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000006885 219.0
SYD3_k127_2961707_7 phosphohistidine phosphatase, SixA - - - 0.0000000000000000000000000000000000000000000000000000001175 201.0
SYD3_k127_2961707_8 - - - - 0.000000000000000000000000000000000000000021 157.0
SYD3_k127_2961707_9 Bacterial protein of unknown function (DUF853) K06915 - - 0.0000000000000000000000002799 109.0
SYD3_k127_296538_0 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 471.0
SYD3_k127_296538_1 Transcriptional regulator K05799 - - 0.00000000000000000000000000000000000000000005655 169.0
SYD3_k127_2976343_0 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0019200,GO:0044237,GO:0044238,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0046835,GO:0071704 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001 602.0
SYD3_k127_2976343_1 C-methyltransferase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009515 432.0
SYD3_k127_2976343_10 Cupin 2, conserved barrel domain protein K01810 - 5.3.1.9 0.0000000000000000000000000000000000000000000001534 174.0
SYD3_k127_2976343_11 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K01784,K03274 - 5.1.3.2,5.1.3.20 0.000000000000000000001581 94.0
SYD3_k127_2976343_2 Glycosyl transferase family 2 K12984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 361.0
SYD3_k127_2976343_3 O-Antigen ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003707 340.0
SYD3_k127_2976343_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 290.0
SYD3_k127_2976343_5 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003364 282.0
SYD3_k127_2976343_6 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000001134 251.0
SYD3_k127_2976343_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000004017 237.0
SYD3_k127_2976343_8 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000000000001967 206.0
SYD3_k127_2976343_9 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000008524 196.0
SYD3_k127_2980110_0 ABC transporter K06147,K18890 - - 9.097e-244 767.0
SYD3_k127_2980110_1 ABC transporter transmembrane region K06147,K18889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 581.0
SYD3_k127_2980110_2 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000593 237.0
SYD3_k127_2984573_0 LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 449.0
SYD3_k127_2984573_1 Alanine-glyoxylate amino-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 298.0
SYD3_k127_2984573_2 thiamine-containing compound biosynthetic process K04102 - 4.1.1.55 0.0000000000000000000000000000000000000000000000000001345 197.0
SYD3_k127_2989466_0 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000033 218.0
SYD3_k127_2989466_1 GrpB protein - - - 0.000000000000000000000000004128 125.0
SYD3_k127_3026326_0 ORF6N domain - - - 0.0000000000000000000000000000000000000000000000000000001842 199.0
SYD3_k127_3026326_1 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid - - - 0.00000000000000000000000000000000002134 150.0
SYD3_k127_3026326_2 Belongs to the GcvT family K00605 - 2.1.2.10 0.00000000000000000000000001154 112.0
SYD3_k127_3026850_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0045333,GO:0046459,GO:0047456,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:1901363 4.2.1.3 0.0 1421.0
SYD3_k127_3026850_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1168.0
SYD3_k127_3026850_10 Heparinase II/III-like protein - - - 2.203e-217 691.0
SYD3_k127_3026850_100 BFD domain protein 2Fe-2S -binding domain protein - - - 0.000000000000000001084 88.0
SYD3_k127_3026850_101 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.0000000009392 61.0
SYD3_k127_3026850_102 TIGRFAM pentapeptide MXKDX repeat protein - - - 0.00000001773 60.0
SYD3_k127_3026850_103 - - - - 0.0000001697 60.0
SYD3_k127_3026850_104 AntiSigma factor - - - 0.00001158 55.0
SYD3_k127_3026850_11 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 2.073e-205 645.0
SYD3_k127_3026850_12 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 2.465e-195 616.0
SYD3_k127_3026850_13 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 605.0
SYD3_k127_3026850_14 3-carboxy-cis,cis-muconate cycloisomerase K01857 - 5.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003982 608.0
SYD3_k127_3026850_15 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005926 597.0
SYD3_k127_3026850_16 Pilus formation protein N terminal region K02280 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006376 574.0
SYD3_k127_3026850_17 MiaB-like tRNA modifying enzyme K18707 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035598,GO:0035600,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050497,GO:0071704,GO:0090304,GO:1901360 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 550.0
SYD3_k127_3026850_18 dehydratase K14449 GO:0003674,GO:0003824,GO:0006082,GO:0006083,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016829,GO:0016830,GO:0016833,GO:0016999,GO:0017001,GO:0017144,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0045733,GO:0046395,GO:0071704,GO:0072329,GO:1901575 4.2.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 535.0
SYD3_k127_3026850_19 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360,GO:1901564 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 512.0
SYD3_k127_3026850_2 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 0.0 1032.0
SYD3_k127_3026850_20 AAA domain K02282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008908 513.0
SYD3_k127_3026850_21 Peptidase family M50 K06402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 492.0
SYD3_k127_3026850_22 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006076 467.0
SYD3_k127_3026850_23 Glycerol-3-phosphate dehydrogenase K00057 GO:0003674,GO:0003824,GO:0006072,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0047952,GO:0052646,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 467.0
SYD3_k127_3026850_24 Major facilitator Superfamily K05939 - 2.3.1.40,6.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 464.0
SYD3_k127_3026850_25 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007569 455.0
SYD3_k127_3026850_26 Carbon-nitrogen hydrolase K01501,K01502 - 3.5.5.1,3.5.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 458.0
SYD3_k127_3026850_27 HemY protein N-terminus K02498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 460.0
SYD3_k127_3026850_28 Zinc-binding dehydrogenase K00001,K00344 - 1.1.1.1,1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 444.0
SYD3_k127_3026850_29 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004487 430.0
SYD3_k127_3026850_3 Elongation factor G C-terminus K06207 GO:0000027,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006996,GO:0008150,GO:0009266,GO:0009408,GO:0009409,GO:0009628,GO:0009987,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071826,GO:0071840 - 0.0 1021.0
SYD3_k127_3026850_30 HpcH/HpaI aldolase/citrate lyase family K01644,K14451 - 3.1.2.30,4.1.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005571 426.0
SYD3_k127_3026850_31 PFAM regulatory protein LysR K11921 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009541 426.0
SYD3_k127_3026850_32 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 428.0
SYD3_k127_3026850_33 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009618 414.0
SYD3_k127_3026850_34 Involved in chromosome partitioning - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007799 400.0
SYD3_k127_3026850_35 Oxidoreductase molybdopterin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 394.0
SYD3_k127_3026850_36 Type II secretion system (T2SS), protein F K12510 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003395 393.0
SYD3_k127_3026850_37 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 GO:0001539,GO:0002048,GO:0002049,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005575,GO:0005623,GO:0005886,GO:0006518,GO:0006629,GO:0006643,GO:0006664,GO:0006807,GO:0006810,GO:0006928,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009237,GO:0009247,GO:0009636,GO:0009987,GO:0015886,GO:0016020,GO:0016209,GO:0016491,GO:0016684,GO:0019184,GO:0019290,GO:0019748,GO:0034641,GO:0040011,GO:0042221,GO:0043043,GO:0043107,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044464,GO:0044550,GO:0046467,GO:0048870,GO:0050896,GO:0051179,GO:0051181,GO:0051186,GO:0051188,GO:0051234,GO:0051674,GO:0051716,GO:0055114,GO:0070887,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0071973,GO:0071975,GO:0071977,GO:0071978,GO:0097237,GO:0097588,GO:0098754,GO:0098869,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901678,GO:1903509,GO:1990748 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 384.0
SYD3_k127_3026850_38 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004732 375.0
SYD3_k127_3026850_39 Pseudouridine synthase K06177 - 5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005755 370.0
SYD3_k127_3026850_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 2.728e-268 831.0
SYD3_k127_3026850_40 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 367.0
SYD3_k127_3026850_41 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 361.0
SYD3_k127_3026850_42 Type II secretion system (T2SS), protein F K12511 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003127 363.0
SYD3_k127_3026850_43 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 329.0
SYD3_k127_3026850_44 SMART PAS domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 327.0
SYD3_k127_3026850_45 proline dipeptidase activity K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007225 321.0
SYD3_k127_3026850_46 FR47-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 308.0
SYD3_k127_3026850_47 SAF K02279 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008287 310.0
SYD3_k127_3026850_48 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003023 318.0
SYD3_k127_3026850_49 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016021,GO:0031224,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009544 302.0
SYD3_k127_3026850_5 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 3.847e-266 827.0
SYD3_k127_3026850_50 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008205 304.0
SYD3_k127_3026850_51 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 292.0
SYD3_k127_3026850_52 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006515 287.0
SYD3_k127_3026850_53 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 289.0
SYD3_k127_3026850_54 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 286.0
SYD3_k127_3026850_55 Redoxin K02199 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001721 274.0
SYD3_k127_3026850_56 Inhibitor of apoptosis-promoting Bax1 K06890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005778 270.0
SYD3_k127_3026850_57 Protein of unknown function (DUF1223) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005646 268.0
SYD3_k127_3026850_58 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000005909 268.0
SYD3_k127_3026850_59 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000007174 263.0
SYD3_k127_3026850_6 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 1.098e-241 756.0
SYD3_k127_3026850_60 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003243 254.0
SYD3_k127_3026850_61 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001971 258.0
SYD3_k127_3026850_62 PAP2 superfamily K12978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001347 258.0
SYD3_k127_3026850_63 probably involved in intracellular septation K06190 - - 0.000000000000000000000000000000000000000000000000000000000000000000001395 241.0
SYD3_k127_3026850_64 ABC-type nitrate sulfonate bicarbonate transport system ATPase component K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000006039 243.0
SYD3_k127_3026850_65 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000001924 248.0
SYD3_k127_3026850_66 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.0000000000000000000000000000000000000000000000000000000000000000003294 235.0
SYD3_k127_3026850_67 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.0000000000000000000000000000000000000000000000000000000000000000925 227.0
SYD3_k127_3026850_68 invasion associated locus B - - - 0.00000000000000000000000000000000000000000000000000000000000003043 218.0
SYD3_k127_3026850_69 Zincin-like metallopeptidase K00930 - 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000001739 214.0
SYD3_k127_3026850_7 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 5.955e-238 739.0
SYD3_k127_3026850_70 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000000000000000000000000000000000000001221 211.0
SYD3_k127_3026850_71 Bacterial transcription activator, effector binding domain - - - 0.000000000000000000000000000000000000000000000000000000002479 212.0
SYD3_k127_3026850_72 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000003749 202.0
SYD3_k127_3026850_73 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000003932 206.0
SYD3_k127_3026850_74 Protein of unknown function (DUF541) K09807 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000006119 203.0
SYD3_k127_3026850_75 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000000000009894 187.0
SYD3_k127_3026850_76 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000004987 186.0
SYD3_k127_3026850_77 EVE domain - - - 0.00000000000000000000000000000000000000000000000002786 182.0
SYD3_k127_3026850_78 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000006241 175.0
SYD3_k127_3026850_79 Protein of unknown function (DUF2794) - - - 0.0000000000000000000000000000000000000000000001439 172.0
SYD3_k127_3026850_8 Type II/IV secretion system protein K02283 - - 2.209e-236 737.0
SYD3_k127_3026850_80 Peptidase M48 - - - 0.000000000000000000000000000000000000000000004113 178.0
SYD3_k127_3026850_81 - - - - 0.0000000000000000000000000000000000000000000131 166.0
SYD3_k127_3026850_82 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000424 168.0
SYD3_k127_3026850_83 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000000000000000002083 162.0
SYD3_k127_3026850_84 - - - - 0.00000000000000000000000000000000000000008841 161.0
SYD3_k127_3026850_85 synthase K01719 - 4.2.1.75 0.0000000000000000000000000000000000000006158 156.0
SYD3_k127_3026850_86 protein tyrosine kinase activity - - - 0.000000000000000000000000000000000000003476 155.0
SYD3_k127_3026850_87 Protein of unknown function (DUF1232) - - - 0.00000000000000000000000000000000000007302 145.0
SYD3_k127_3026850_88 Protein of unknown function (DUF1761) - - - 0.0000000000000000000000000000000000001198 147.0
SYD3_k127_3026850_89 YGGT family K02221 - - 0.0000000000000000000000000000000000004649 143.0
SYD3_k127_3026850_9 Mo-co oxidoreductase dimerisation domain K00387 - 1.8.3.1 2.157e-224 702.0
SYD3_k127_3026850_90 succinate dehydrogenase K00242 - - 0.0000000000000000000000000000000000009045 144.0
SYD3_k127_3026850_91 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000001124 141.0
SYD3_k127_3026850_92 Sigma-70, region 4 - - - 0.00000000000000000000000000000000003898 140.0
SYD3_k127_3026850_93 cytochrome - - - 0.00000000000000000000000000000000008806 138.0
SYD3_k127_3026850_94 Dehydrogenase K15371 GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0008150,GO:0008152,GO:0016491,GO:0016638,GO:0016639,GO:0055114 1.4.1.2 0.0000000000000000000000000003467 115.0
SYD3_k127_3026850_95 DUF167 K09131 - - 0.00000000000000000000000000106 117.0
SYD3_k127_3026850_96 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.000000000000000000000000003796 124.0
SYD3_k127_3026850_97 - - - - 0.0000000000000000000000001083 113.0
SYD3_k127_3026850_98 - - - - 0.00000000000000000004794 94.0
SYD3_k127_3026850_99 - - - - 0.0000000000000000009299 94.0
SYD3_k127_3028474_0 ABC transporter K15738 - - 3.776e-319 985.0
SYD3_k127_3028474_1 ABC transporter substrate-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006246 601.0
SYD3_k127_3028474_10 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 312.0
SYD3_k127_3028474_11 Uncharacterized protein family, UPF0114 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003523 297.0
SYD3_k127_3028474_12 Phosphatidylethanolamine-binding protein K06910 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 282.0
SYD3_k127_3028474_13 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003702 291.0
SYD3_k127_3028474_14 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001617 258.0
SYD3_k127_3028474_15 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000000000000007372 207.0
SYD3_k127_3028474_16 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000001727 198.0
SYD3_k127_3028474_17 Domain of unknown function (DUF4440) - - - 0.00000000000000000000000000000000000000000007144 161.0
SYD3_k127_3028474_18 Colicin V production protein K03558 - - 0.0000000000000000000000000000000000000001265 159.0
SYD3_k127_3028474_19 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K03574 - 3.6.1.55 0.00000000000000000000000000000000004435 142.0
SYD3_k127_3028474_2 Transglycosylase SLT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 517.0
SYD3_k127_3028474_20 Domain of Unknown Function (DUF930) - - - 0.0000000000000000000000000000005745 126.0
SYD3_k127_3028474_21 Uncharacterized protein conserved in bacteria (DUF2188) - - - 0.000000000000000000000000000007313 123.0
SYD3_k127_3028474_22 BrnA antitoxin of type II toxin-antitoxin system - - - 0.00000000000000000000000126 104.0
SYD3_k127_3028474_23 - - - - 0.000000000000000000000001436 106.0
SYD3_k127_3028474_24 Cupin domain - - - 0.000000000000000000000003315 109.0
SYD3_k127_3028474_25 - - - - 0.00000000000000000000000427 105.0
SYD3_k127_3028474_27 DoxX K15977 - - 0.0000000000002937 80.0
SYD3_k127_3028474_28 - - - - 0.0000000001202 65.0
SYD3_k127_3028474_29 ATPases associated with a variety of cellular activities K01995 - - 0.000000005121 62.0
SYD3_k127_3028474_3 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005526 507.0
SYD3_k127_3028474_30 Protein conserved in bacteria - - - 0.0000001856 60.0
SYD3_k127_3028474_4 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008344 464.0
SYD3_k127_3028474_5 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00018,K00058 - 1.1.1.29,1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009395 434.0
SYD3_k127_3028474_6 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 412.0
SYD3_k127_3028474_7 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 394.0
SYD3_k127_3028474_8 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008189 366.0
SYD3_k127_3028474_9 metal-dependent hydrolase of the TIM-barrel fold K07045,K14333,K15063 - 4.1.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003538 369.0
SYD3_k127_3076472_0 PFAM 2-nitropropane dioxygenase NPD K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000004141 211.0
SYD3_k127_3079160_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 7.831e-196 634.0
SYD3_k127_3130741_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1407.0
SYD3_k127_3130741_1 Ftsk_gamma K03466 - - 0.0 1030.0
SYD3_k127_3130741_10 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 422.0
SYD3_k127_3130741_11 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005747 404.0
SYD3_k127_3130741_12 exodeoxyribonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006265 402.0
SYD3_k127_3130741_13 DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 370.0
SYD3_k127_3130741_14 ParB-like nuclease domain K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003605 332.0
SYD3_k127_3130741_15 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007759 324.0
SYD3_k127_3130741_16 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002941 316.0
SYD3_k127_3130741_17 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 301.0
SYD3_k127_3130741_18 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004048 250.0
SYD3_k127_3130741_19 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family K03185 GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016491,GO:0019168,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901576,GO:1901661,GO:1901663 - 0.00000000000000000000000000000000000000000000000000000000000000000000002054 252.0
SYD3_k127_3130741_2 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 3.54e-303 941.0
SYD3_k127_3130741_20 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.00000000000000000000000000000000000000000000000000000000000000000003081 240.0
SYD3_k127_3130741_21 Belongs to the P(II) protein family K04751,K04752 - - 0.000000000000000000000000000000000000000000000000000000005057 199.0
SYD3_k127_3130741_22 Lipopolysaccharide-assembly K03643 - - 0.0000000000000000000000000000000000000000000000000000000294 202.0
SYD3_k127_3130741_23 Belongs to the P(II) protein family K04751,K04752 - - 0.000000000000000000000000000000000000000000000000000001161 193.0
SYD3_k127_3130741_24 Lytic transglycolase K03642 - - 0.0000000000000000000000000000000000000002391 164.0
SYD3_k127_3130741_25 Protein of unknown function (DUF2927) - - - 0.000000000000000000000000000000000000004139 155.0
SYD3_k127_3130741_26 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.00000000000000000000000000000000005208 139.0
SYD3_k127_3130741_27 - - - - 0.00000000000000000000000001886 114.0
SYD3_k127_3130741_28 Uncharacterized protein conserved in bacteria (DUF2171) - - - 0.000000000000000000004107 94.0
SYD3_k127_3130741_3 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 8.446e-247 771.0
SYD3_k127_3130741_4 Ammonium Transporter K03320 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0008519,GO:0015075,GO:0015291,GO:0015292,GO:0015669,GO:0015670,GO:0015696,GO:0015893,GO:0016020,GO:0016021,GO:0019755,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072488,GO:0098655 - 3.105e-239 747.0
SYD3_k127_3130741_5 Ammonium Transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006743 606.0
SYD3_k127_3130741_6 Aminotransferase class I and II K14261,K14267 - 2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004234 566.0
SYD3_k127_3130741_7 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 487.0
SYD3_k127_3130741_8 acyl-CoA thioesterase K10805 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006629,GO:0006631,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016042,GO:0016054,GO:0016289,GO:0016787,GO:0016788,GO:0016790,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0042802,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0046483,GO:0047617,GO:0051186,GO:0055086,GO:0071704,GO:0072329,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 442.0
SYD3_k127_3130741_9 Cellulose biosynthesis protein BcsQ K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009719 435.0
SYD3_k127_3136343_0 PFAM Haloacid dehalogenase domain protein hydrolase K01079 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 396.0
SYD3_k127_3136343_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004151 248.0
SYD3_k127_3136343_2 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000001285 213.0
SYD3_k127_3169187_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 4.958e-213 665.0
SYD3_k127_3169187_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 367.0
SYD3_k127_3169187_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000001918 85.0
SYD3_k127_3169187_4 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0001073 46.0
SYD3_k127_3176761_0 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 319.0
SYD3_k127_3176761_1 decarboxylase K01607 - 4.1.1.44 0.000000000000000002994 91.0
SYD3_k127_320887_0 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 459.0
SYD3_k127_320887_1 repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 433.0
SYD3_k127_320887_2 PFAM Glutathione S-transferase domain K11209 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000871 372.0
SYD3_k127_320887_3 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.0000000000000000000000000000000001716 138.0
SYD3_k127_320887_4 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.00000000000000000002575 94.0
SYD3_k127_320887_5 - - - - 0.00000000000002406 76.0
SYD3_k127_3209905_0 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001101 287.0
SYD3_k127_3209905_1 Tripartite tricarboxylate transporter family receptor - - - 0.000002641 51.0
SYD3_k127_3216505_0 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K11177 - 1.17.1.4 7.293e-244 770.0
SYD3_k127_3216505_1 CO dehydrogenase flavoprotein C-terminal domain K11178 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 381.0
SYD3_k127_3231397_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 4.431e-314 974.0
SYD3_k127_3231397_1 ABC transporter K06147 - - 1.319e-255 801.0
SYD3_k127_3231397_10 Belongs to the GST superfamily K11209 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007043 323.0
SYD3_k127_3231397_11 Thiamine monophosphate synthase K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000000000000000000002372 221.0
SYD3_k127_3231397_12 Acetyltransferase (GNAT) domain K03827 - - 0.000000000000000000000000000000000000000000000000000000000001075 213.0
SYD3_k127_3231397_13 Protein of unknown function (DUF1465) K13592 - - 0.00000000000000000000000000000000000000000000000000002584 196.0
SYD3_k127_3231397_14 50S ribosomal protein L31 K02909 - - 0.0000000000000000000000000000000000001047 143.0
SYD3_k127_3231397_15 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000000000000000000000000000001606 140.0
SYD3_k127_3231397_16 Domain of unknown function (DUF4164) - - - 0.00000000000000000001205 95.0
SYD3_k127_3231397_17 Protein of unknown function (DUF1192) - - - 0.00000000000003656 73.0
SYD3_k127_3231397_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 2.479e-194 608.0
SYD3_k127_3231397_3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 599.0
SYD3_k127_3231397_4 Fructose-bisphosphate aldolase class-I K01623 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000858 561.0
SYD3_k127_3231397_5 Belongs to the phosphoglycerate kinase family K00927 GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 564.0
SYD3_k127_3231397_6 OmpA family K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004742 476.0
SYD3_k127_3231397_7 MotA TolQ ExbB proton channel family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 441.0
SYD3_k127_3231397_8 Inositol monophosphatase family K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 392.0
SYD3_k127_3231397_9 Sel1 domain protein repeat-containing protein K07126 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 349.0
SYD3_k127_3256068_0 PFAM helix-turn-helix, AraC type ThiJ PfpI - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 334.0
SYD3_k127_3256068_1 Putative methyltransferase - - - 0.00000000000000000000000000000003722 130.0
SYD3_k127_338150_0 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 310.0
SYD3_k127_338150_1 XFP C-terminal domain K01621 - 4.1.2.22,4.1.2.9 0.000000000000000000000000000006561 119.0
SYD3_k127_338150_2 IMP dehydrogenase activity K04767 - - 0.0000000000000000000000000005497 119.0
SYD3_k127_338150_3 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000002599 50.0
SYD3_k127_338150_4 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0003462 48.0
SYD3_k127_3395300_0 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0 1036.0
SYD3_k127_3395300_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 2.998e-291 900.0
SYD3_k127_3395300_10 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 4.819e-206 649.0
SYD3_k127_3395300_11 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 3.084e-196 619.0
SYD3_k127_3395300_12 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006794 559.0
SYD3_k127_3395300_13 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005029 522.0
SYD3_k127_3395300_14 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 466.0
SYD3_k127_3395300_15 Permease K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004567 460.0
SYD3_k127_3395300_16 malonyl CoA-acyl carrier protein transacylase K00645 GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 443.0
SYD3_k127_3395300_17 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 441.0
SYD3_k127_3395300_18 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 433.0
SYD3_k127_3395300_19 Permease K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 431.0
SYD3_k127_3395300_2 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 1.402e-287 891.0
SYD3_k127_3395300_20 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 429.0
SYD3_k127_3395300_21 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006136 411.0
SYD3_k127_3395300_22 Domain of unknown function (DUF1732) - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009746 394.0
SYD3_k127_3395300_23 alcohol dehydrogenase K00001,K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 396.0
SYD3_k127_3395300_24 KR domain K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 372.0
SYD3_k127_3395300_25 Belongs to the short-chain dehydrogenases reductases (SDR) family - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0008150,GO:0008152,GO:0009056,GO:0016491,GO:0044464,GO:0055114,GO:0071704,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004266 323.0
SYD3_k127_3395300_26 Integral membrane protein TerC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 299.0
SYD3_k127_3395300_27 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006019 295.0
SYD3_k127_3395300_28 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 292.0
SYD3_k127_3395300_29 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001688 283.0
SYD3_k127_3395300_3 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 3.751e-269 837.0
SYD3_k127_3395300_30 Colicin V production protein K03558 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003922 273.0
SYD3_k127_3395300_31 SurA N-terminal domain K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000003114 260.0
SYD3_k127_3395300_32 Tetratricopeptide repeat-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003773 250.0
SYD3_k127_3395300_33 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000000001099 244.0
SYD3_k127_3395300_34 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000004051 244.0
SYD3_k127_3395300_35 DNA polymerase III, chi subunit K02339 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000009347 228.0
SYD3_k127_3395300_36 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000008518 220.0
SYD3_k127_3395300_37 NnrU protein - - - 0.000000000000000000000000000000000000000000000000000000004745 205.0
SYD3_k127_3395300_38 Belongs to the ArsC family K00537 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 1.20.4.1 0.0000000000000000000000000000000000000000000000000002067 186.0
SYD3_k127_3395300_39 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000001184 183.0
SYD3_k127_3395300_4 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 2.4.2.14 2.717e-268 834.0
SYD3_k127_3395300_40 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000000000000000000001236 151.0
SYD3_k127_3395300_41 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000009529 148.0
SYD3_k127_3395300_42 MAPEG family - - - 0.000000000000000000000000000000000002261 149.0
SYD3_k127_3395300_43 - - - - 0.0000000000000000001902 98.0
SYD3_k127_3395300_44 - - - - 0.000000000000000002714 92.0
SYD3_k127_3395300_45 - - - - 0.00000000000001506 81.0
SYD3_k127_3395300_5 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088,K00364 GO:0003674,GO:0003824,GO:0003938,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.205,1.7.1.7 2.405e-252 788.0
SYD3_k127_3395300_6 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 5.838e-244 761.0
SYD3_k127_3395300_7 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 1.889e-228 717.0
SYD3_k127_3395300_8 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.4.11.1 1.677e-227 715.0
SYD3_k127_3395300_9 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.179 6.742e-226 704.0
SYD3_k127_3437380_0 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 6.363e-314 975.0
SYD3_k127_3437380_1 oxidation-reduction process K09022 - 3.5.99.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007644 343.0
SYD3_k127_3437380_2 Nitrate ABC transporter ATP-binding protein K02049,K10831 - 3.6.3.36 0.000000000000000000000000000000000000000000000000000000000000000000000000003733 260.0
SYD3_k127_3437380_3 Binding-protein-dependent transport system inner membrane component K15554 - - 0.000000000000000000000000000000000000000000000000000000000000000000263 239.0
SYD3_k127_3437380_4 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.000000000000000000000000000000000000000000000000000000000000000004255 230.0
SYD3_k127_3437380_5 - - - - 0.000000000000000000000000000000000000000000000000000000001272 204.0
SYD3_k127_3437380_6 Lrp/AsnC ligand binding domain - - - 0.00000000000000000000000000000000000000004523 153.0
SYD3_k127_3437380_7 NMT1-like family K02051 - - 0.0000000000000000000000000000000001311 151.0
SYD3_k127_3502084_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1324.0
SYD3_k127_3502084_1 DEAD/H associated K03724 - - 0.0 1267.0
SYD3_k127_3502084_10 Alcohol dehydrogenase GroES-like domain K00001,K14446 - 1.1.1.1,1.3.1.85 1.536e-248 770.0
SYD3_k127_3502084_11 PFAM binding-protein-dependent transport systems inner membrane component K02011 - - 7.197e-228 717.0
SYD3_k127_3502084_12 homoserine dehydrogenase K00003 - 1.1.1.3 2.239e-219 691.0
SYD3_k127_3502084_13 Belongs to the thiolase family K00626 GO:0003674,GO:0003824,GO:0003988,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0006725,GO:0006805,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016020,GO:0016042,GO:0016054,GO:0016408,GO:0016740,GO:0016746,GO:0016747,GO:0019395,GO:0019439,GO:0019748,GO:0019752,GO:0030258,GO:0030312,GO:0032787,GO:0033554,GO:0033812,GO:0034440,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044464,GO:0046395,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0071944,GO:0072329,GO:0098754,GO:1901360,GO:1901361,GO:1901575 2.3.1.9 1.841e-212 664.0
SYD3_k127_3502084_14 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 3.279e-201 632.0
SYD3_k127_3502084_15 Belongs to the thiolase family K00626 - 2.3.1.9 4.815e-199 625.0
SYD3_k127_3502084_16 UvrD-like helicase C-terminal domain K01144 - 3.1.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 604.0
SYD3_k127_3502084_17 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005534 596.0
SYD3_k127_3502084_18 FAD binding domain K20940 - 1.14.13.218 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005077 581.0
SYD3_k127_3502084_19 Luciferase-like monooxygenase K14733 - 1.14.13.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 553.0
SYD3_k127_3502084_2 B12 binding domain K14447 - 5.4.99.63 0.0 1031.0
SYD3_k127_3502084_20 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 532.0
SYD3_k127_3502084_21 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006047 531.0
SYD3_k127_3502084_22 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000778 508.0
SYD3_k127_3502084_23 phosphate transporter K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 491.0
SYD3_k127_3502084_24 Sel1-like repeats. K07126,K13582 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007037 516.0
SYD3_k127_3502084_25 oligosaccharyl transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003971 489.0
SYD3_k127_3502084_26 Belongs to the DapA family K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007651 475.0
SYD3_k127_3502084_27 Dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 481.0
SYD3_k127_3502084_28 Cobalamin synthesis protein cobW C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006876 471.0
SYD3_k127_3502084_29 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003635 454.0
SYD3_k127_3502084_3 enoyl-CoA hydratase isomerase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.0 1010.0
SYD3_k127_3502084_30 Bacterial periplasmic substrate-binding proteins K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 445.0
SYD3_k127_3502084_31 Belongs to the class-I aminoacyl-tRNA synthetase family K01894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 432.0
SYD3_k127_3502084_32 Belongs to the peptidase S11 family K01286 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008853 436.0
SYD3_k127_3502084_33 ABC-type Fe3 transport system, periplasmic K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003843 432.0
SYD3_k127_3502084_34 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 399.0
SYD3_k127_3502084_35 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004278 386.0
SYD3_k127_3502084_36 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 366.0
SYD3_k127_3502084_37 HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 358.0
SYD3_k127_3502084_38 Pyridoxal phosphate biosynthetic protein PdxA K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008812 367.0
SYD3_k127_3502084_39 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005692 357.0
SYD3_k127_3502084_4 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 1.462e-307 953.0
SYD3_k127_3502084_40 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005641 356.0
SYD3_k127_3502084_41 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004046 354.0
SYD3_k127_3502084_42 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 331.0
SYD3_k127_3502084_43 Phospholipase/Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003996 331.0
SYD3_k127_3502084_44 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 329.0
SYD3_k127_3502084_45 TOBE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 332.0
SYD3_k127_3502084_46 methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 329.0
SYD3_k127_3502084_47 DedA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 304.0
SYD3_k127_3502084_48 Putative transmembrane protein (Alph_Pro_TM) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 306.0
SYD3_k127_3502084_49 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 301.0
SYD3_k127_3502084_5 acyl-CoA dehydrogenase K00249 - 1.3.8.7 4.181e-298 938.0
SYD3_k127_3502084_50 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004732 303.0
SYD3_k127_3502084_51 Calcineurin-like phosphoesterase K06953 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 296.0
SYD3_k127_3502084_52 endonuclease III K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000004602 267.0
SYD3_k127_3502084_53 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007656 263.0
SYD3_k127_3502084_54 protein possibly involved in utilization of glycolate and propanediol - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001524 259.0
SYD3_k127_3502084_55 Bacterial protein of unknown function (DUF924) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005046 254.0
SYD3_k127_3502084_56 Protein of unknown function (DUF861) - - - 0.00000000000000000000000000000000000000000000000000000000000008639 227.0
SYD3_k127_3502084_57 methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000004009 225.0
SYD3_k127_3502084_58 carbonate dehydratase activity K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000687 207.0
SYD3_k127_3502084_59 Cysteine-rich secretory protein family - - - 0.000000000000000000000000000000000000000000000000000000008 204.0
SYD3_k127_3502084_6 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 2.189e-266 830.0
SYD3_k127_3502084_60 Disulfide bond formation protein DsbB K03611 - - 0.0000000000000000000000000000000000000000000000000009481 190.0
SYD3_k127_3502084_61 Protein required for attachment to host cells - - - 0.00000000000000000000000000000000000000000000000007493 181.0
SYD3_k127_3502084_62 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000002004 174.0
SYD3_k127_3502084_63 phosphoribosyl-ATP diphosphatase activity K01523 - 3.6.1.31 0.00000000000000000000000000000000000000002266 156.0
SYD3_k127_3502084_64 general stress protein - - - 0.000000000000000000000000000000000000005078 153.0
SYD3_k127_3502084_65 - - - - 0.0000000000000000000000000001326 123.0
SYD3_k127_3502084_66 transcriptional regulator - - - 0.0000000000000000000000000002402 119.0
SYD3_k127_3502084_67 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000468 97.0
SYD3_k127_3502084_68 - - - - 0.0000000000000000357 92.0
SYD3_k127_3502084_69 gamma-carboxymuconolactone decarboxylase subunit K01607 - 4.1.1.44 0.000000000000005704 75.0
SYD3_k127_3502084_7 Acyl-CoA dehydrogenase, C-terminal domain K14448 - 1.3.8.12 6.685e-264 822.0
SYD3_k127_3502084_8 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K03520 - 1.2.5.3 3.857e-259 821.0
SYD3_k127_3502084_9 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01895 - 6.2.1.1 1.929e-252 788.0
SYD3_k127_3528928_0 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 619.0
SYD3_k127_3528928_1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000006956 232.0
SYD3_k127_3528928_2 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) - - - 0.0000000000000000000000000000001436 128.0
SYD3_k127_3528928_3 - - - - 0.00000000000000000000000000002471 119.0
SYD3_k127_3528928_4 Rare lipoprotein A - - - 0.0000000000000000000000000002653 118.0
SYD3_k127_3528928_5 - - - - 0.0000000001309 65.0
SYD3_k127_3528928_6 Pfam:Pyridox_oxidase K07006 - - 0.0000000008368 65.0
SYD3_k127_3528928_7 peptidase inhibitor activity - - - 0.0000004963 58.0
SYD3_k127_3528928_8 Sporulation related domain - - - 0.00003431 51.0
SYD3_k127_3542149_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 6.793e-321 1004.0
SYD3_k127_3542149_1 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000001597 244.0
SYD3_k127_3588877_0 Metallopeptidase family M24 K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007145 406.0
SYD3_k127_3588877_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.00000000000000000000000000000001519 127.0
SYD3_k127_3621142_0 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.0 1195.0
SYD3_k127_3621142_1 Lanthionine synthetase C-like protein - - - 0.0 1118.0
SYD3_k127_3621142_10 Major facilitator superfamily - - - 5.857e-217 681.0
SYD3_k127_3621142_11 Receptor family ligand binding region K01999 - - 8.652e-215 670.0
SYD3_k127_3621142_12 Glycosyl transferase family group 2 K03669 - - 3.434e-205 664.0
SYD3_k127_3621142_13 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 629.0
SYD3_k127_3621142_14 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 574.0
SYD3_k127_3621142_15 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006228 549.0
SYD3_k127_3621142_16 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 480.0
SYD3_k127_3621142_17 Putative beta-barrel porin 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000599 483.0
SYD3_k127_3621142_18 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 469.0
SYD3_k127_3621142_19 Protein of unknown function (DUF3095) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 450.0
SYD3_k127_3621142_2 Proton-conducting membrane transporter - - - 1.579e-317 984.0
SYD3_k127_3621142_20 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 443.0
SYD3_k127_3621142_21 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 443.0
SYD3_k127_3621142_22 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 425.0
SYD3_k127_3621142_23 Peptidase dimerisation domain K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 422.0
SYD3_k127_3621142_24 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004295 419.0
SYD3_k127_3621142_25 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002511 416.0
SYD3_k127_3621142_26 ATPases associated with a variety of cellular activities K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 414.0
SYD3_k127_3621142_27 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 409.0
SYD3_k127_3621142_28 glycosyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 403.0
SYD3_k127_3621142_29 COG1024 Enoyl-CoA hydratase carnithine racemase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 393.0
SYD3_k127_3621142_3 benzoate-CoA ligase K08295 - 6.2.1.32 1.05e-299 927.0
SYD3_k127_3621142_30 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004296 396.0
SYD3_k127_3621142_31 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 380.0
SYD3_k127_3621142_32 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009554 385.0
SYD3_k127_3621142_33 Cyclic peptide transporter K06160 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 362.0
SYD3_k127_3621142_34 COG4237 Hydrogenase 4 membrane component (E) K12140 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 346.0
SYD3_k127_3621142_35 Squalene/phytoene synthase K21678,K21679 - 2.5.1.103,4.2.3.156 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 338.0
SYD3_k127_3621142_36 Squalene/phytoene synthase K02291,K21678 - 2.5.1.103,2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 334.0
SYD3_k127_3621142_37 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 307.0
SYD3_k127_3621142_38 COG1985 Pyrimidine reductase, riboflavin biosynthesis K00082 - 1.1.1.193 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 298.0
SYD3_k127_3621142_39 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009754 289.0
SYD3_k127_3621142_4 Bacterial extracellular solute-binding proteins, family 5 Middle K13893 - - 1.595e-283 883.0
SYD3_k127_3621142_40 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 299.0
SYD3_k127_3621142_41 Flavin containing amine oxidoreductase K21677 - 1.17.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 286.0
SYD3_k127_3621142_42 Methyltransferase FkbM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 286.0
SYD3_k127_3621142_43 Beta-xylanase K01181 - 3.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002 292.0
SYD3_k127_3621142_44 Bacterial sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001643 274.0
SYD3_k127_3621142_45 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005032 252.0
SYD3_k127_3621142_46 Core-2/I-Branching enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009353 251.0
SYD3_k127_3621142_47 COG0330 Membrane protease subunits, stomatin prohibitin homologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000002183 252.0
SYD3_k127_3621142_48 cyclic nucleotide-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000001254 236.0
SYD3_k127_3621142_49 Creatininase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000000000003014 232.0
SYD3_k127_3621142_5 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K16554 - - 2.348e-274 864.0
SYD3_k127_3621142_50 Hexapeptide repeat of succinyl-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000005571 226.0
SYD3_k127_3621142_51 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.00000000000000000000000000000000000000000000000000000000000003378 225.0
SYD3_k127_3621142_52 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000007457 192.0
SYD3_k127_3621142_53 Polysaccharide pyruvyl transferase K19431 - - 0.00000000000000000000000000000000000000000000000004959 193.0
SYD3_k127_3621142_54 SLBB domain K01991 - - 0.0000000000000000000000000000000000000000000000000685 186.0
SYD3_k127_3621142_55 endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000001648 177.0
SYD3_k127_3621142_56 COG1846 Transcriptional regulators - - - 0.000000000000000000000000000000000000000001211 161.0
SYD3_k127_3621142_57 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000001541 128.0
SYD3_k127_3621142_58 plasmid maintenance K03496 - - 0.00000000000000000000000000006829 124.0
SYD3_k127_3621142_59 protein domain associated with GTPases - - - 0.0000000000000000000000000002004 122.0
SYD3_k127_3621142_6 Proton-conducting membrane transporter K12141 - - 5.34e-258 801.0
SYD3_k127_3621142_60 protein associated with GTPases - - - 0.0000000000000000000000000004625 121.0
SYD3_k127_3621142_61 Cytochrome C - - - 0.0000000000000000000000000005773 120.0
SYD3_k127_3621142_62 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.000000000000000000000000002272 127.0
SYD3_k127_3621142_63 - - - - 0.000000000000000000000000003891 115.0
SYD3_k127_3621142_64 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 0.00000000000000000000001103 100.0
SYD3_k127_3621142_65 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000001134 99.0
SYD3_k127_3621142_66 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.00000000000000002218 85.0
SYD3_k127_3621142_67 DNA repair - - - 0.00000000000000007083 90.0
SYD3_k127_3621142_68 PFAM Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000003492 83.0
SYD3_k127_3621142_7 FAD dependent oxidoreductase - - - 9.942e-246 770.0
SYD3_k127_3621142_70 Methyltransferase domain - - - 0.00000000000001455 82.0
SYD3_k127_3621142_71 - - - - 0.000000276 54.0
SYD3_k127_3621142_72 PFAM O-Antigen ligase - - - 0.000000373 63.0
SYD3_k127_3621142_8 Involved in beta-(1-- 2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP- binding domain (NBD) is responsible for energy generation K06147 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702 - 1.306e-243 766.0
SYD3_k127_3621142_9 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 9.091e-229 721.0
SYD3_k127_3699343_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0 1022.0
SYD3_k127_3699343_1 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 1.649e-205 644.0
SYD3_k127_3699343_10 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002065 228.0
SYD3_k127_3699343_12 antibiotic catabolic process - - - 0.00000000000000000000000000000174 127.0
SYD3_k127_3699343_13 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000183 97.0
SYD3_k127_3699343_14 - - - - 0.0000000000001908 75.0
SYD3_k127_3699343_2 Tripartite tricarboxylate transporter TctA family K07793 - - 4.896e-205 653.0
SYD3_k127_3699343_3 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003371 610.0
SYD3_k127_3699343_4 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 598.0
SYD3_k127_3699343_5 Catalytic LigB subunit of aromatic ring-opening dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005055 493.0
SYD3_k127_3699343_6 Oxidoreductase family, C-terminal alpha/beta domain K18067 - 1.3.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004102 420.0
SYD3_k127_3699343_7 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 389.0
SYD3_k127_3699343_8 thiamine-containing compound biosynthetic process K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004721 338.0
SYD3_k127_3699343_9 TIGRFAM TRAP transporter solute receptor, TAXI family K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008378 249.0
SYD3_k127_3744976_0 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 361.0
SYD3_k127_3744976_1 thiamine-containing compound biosynthetic process K04102 - 4.1.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 346.0
SYD3_k127_3744976_2 FAD binding domain in molybdopterin dehydrogenase K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000001905 193.0
SYD3_k127_3763511_0 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.0 1187.0
SYD3_k127_3763511_1 His Kinase A (phosphoacceptor) domain K13587 - 2.7.13.3 0.0 1133.0
SYD3_k127_3763511_10 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 GO:0005575,GO:0005623,GO:0009288,GO:0009425,GO:0042597,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 561.0
SYD3_k127_3763511_11 His Kinase A (phosphoacceptor) domain K07716,K11357 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006352 563.0
SYD3_k127_3763511_12 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005439 563.0
SYD3_k127_3763511_13 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 494.0
SYD3_k127_3763511_14 Fungal trichothecene efflux pump (TRI12) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 501.0
SYD3_k127_3763511_15 ABC transporter K01990 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005361 481.0
SYD3_k127_3763511_16 FlhB HrpN YscU SpaS Family K02401 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006498 464.0
SYD3_k127_3763511_17 Amino-transferase class IV K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 454.0
SYD3_k127_3763511_18 LAO AO transport system K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 453.0
SYD3_k127_3763511_19 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004564 432.0
SYD3_k127_3763511_2 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 0.0 1067.0
SYD3_k127_3763511_20 transport, permease protein K01992 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003626 418.0
SYD3_k127_3763511_21 flagellar basal-body rod protein FlgG K02392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 400.0
SYD3_k127_3763511_22 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941,K18824 - 2.5.1.15,2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 386.0
SYD3_k127_3763511_23 Plays a role in the flagellum-specific transport system K02419 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 365.0
SYD3_k127_3763511_24 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 362.0
SYD3_k127_3763511_25 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 358.0
SYD3_k127_3763511_26 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009174 339.0
SYD3_k127_3763511_27 Role in flagellar biosynthesis K02421 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 340.0
SYD3_k127_3763511_28 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003328 335.0
SYD3_k127_3763511_29 Tim44 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 327.0
SYD3_k127_3763511_3 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 GO:0003674,GO:0003824,GO:0004333,GO:0005488,GO:0005515,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016860,GO:0016862,GO:0016999,GO:0017144,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0048037,GO:0050163,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 2.472e-304 938.0
SYD3_k127_3763511_30 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily K15270 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 318.0
SYD3_k127_3763511_31 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 312.0
SYD3_k127_3763511_32 Belongs to the flagella basal body rod proteins family K02391,K02392 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 304.0
SYD3_k127_3763511_33 Chaperone for flagella basal body P-ring formation K02386 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 290.0
SYD3_k127_3763511_34 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003126 281.0
SYD3_k127_3763511_35 Protein of unknown function (DUF1214) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001771 266.0
SYD3_k127_3763511_36 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000003388 272.0
SYD3_k127_3763511_37 Protein of unknown function (DUF1254) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004331 261.0
SYD3_k127_3763511_38 Putative zinc- or iron-chelating domain K09160 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009581 254.0
SYD3_k127_3763511_39 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids - - - 0.000000000000000000000000000000000000000000000000000000000000000000001701 241.0
SYD3_k127_3763511_4 Tetratricopeptide repeat - - - 1.548e-303 974.0
SYD3_k127_3763511_40 Dehydrogenase K00020,K08319 - 1.1.1.31,1.1.1.411 0.000000000000000000000000000000000000000000000000000000000000000000004296 244.0
SYD3_k127_3763511_41 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000000000000000000000000000000000001112 231.0
SYD3_k127_3763511_42 Belongs to the flagella basal body rod proteins family K02388 - - 0.000000000000000000000000000000000000000000000000000000000000000005927 231.0
SYD3_k127_3763511_43 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000008302 224.0
SYD3_k127_3763511_44 PFAM MgtE intracellular - - - 0.0000000000000000000000000000000000000000000000000000000000003073 224.0
SYD3_k127_3763511_45 Fe-S metabolism associated domain K02426 - - 0.000000000000000000000000000000000000000000000000000000000008546 211.0
SYD3_k127_3763511_46 AraC-like ligand binding domain - - - 0.000000000000000000000000000000000000000000000000000000006435 201.0
SYD3_k127_3763511_47 Flagellar biosynthesis protein, FliO - - - 0.00000000000000000000000000000000000000000000000000000014 205.0
SYD3_k127_3763511_48 Removes 5-oxoproline from various penultimate amino acid residues except L-proline K01304 - 3.4.19.3 0.00000000000000000000000000000000000000000000000000001325 196.0
SYD3_k127_3763511_49 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950,K13940 - 2.7.6.3,4.1.2.25 0.0000000000000000000000000000000000000000000000000002929 188.0
SYD3_k127_3763511_5 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 1.87e-215 685.0
SYD3_k127_3763511_50 - - - - 0.0000000000000000000000000000000000000000000000000891 186.0
SYD3_k127_3763511_51 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.00000000000000000000000000000000000000000000001859 177.0
SYD3_k127_3763511_52 Cupin domain - - - 0.0000000000000000000000000000000000000000000009131 170.0
SYD3_k127_3763511_53 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.000000000000000000000000000000000000000000005351 175.0
SYD3_k127_3763511_54 Protein of unknown function (DUF1491) - - - 0.00000000000000000000000000000000000000000003576 163.0
SYD3_k127_3763511_55 Domain of unknown function (DUF4332) - - - 0.0000000000000000000000000000000000000000004675 161.0
SYD3_k127_3763511_56 Carboxymuconolactone decarboxylase family - - - 0.000000000000000000000000000000000000000002854 158.0
SYD3_k127_3763511_57 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.000000000000000000000000000000000000000008661 160.0
SYD3_k127_3763511_58 Putative peptidoglycan binding domain - - - 0.00000000000000000000000000000000000000002552 161.0
SYD3_k127_3763511_6 Peptidase dimerisation domain K01436 - - 1.821e-205 652.0
SYD3_k127_3763511_60 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000000003885 149.0
SYD3_k127_3763511_61 Class II flagellar assembly regulator - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000001334 146.0
SYD3_k127_3763511_62 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.0000000000000000000000000000000002571 138.0
SYD3_k127_3763511_63 helix_turn_helix, arabinose operon control protein K07506 - - 0.0000000000000000000000000000000007888 138.0
SYD3_k127_3763511_64 - - - - 0.00000000000000000000000000000001056 135.0
SYD3_k127_3763511_65 - - - - 0.000000000000000000000000000007447 123.0
SYD3_k127_3763511_66 Role in flagellar biosynthesis K02420 - - 0.00000000000000000000000000002542 119.0
SYD3_k127_3763511_67 Rod binding protein - - - 0.00000000000000000000000000005385 120.0
SYD3_k127_3763511_68 Cold shock K03704 - - 0.0000000000000000000000000001546 116.0
SYD3_k127_3763511_69 Flagellar hook-basal body complex protein FliE K02408 - - 0.00000000000000000000000002396 112.0
SYD3_k127_3763511_7 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0071496 - 3.187e-199 624.0
SYD3_k127_3763511_70 - - - - 0.00000000000000000000000004764 119.0
SYD3_k127_3763511_71 Protein of unknown function (DUF3750) - - - 0.00000000000000000000000009225 109.0
SYD3_k127_3763511_72 - - - - 0.000000000000000000000000186 115.0
SYD3_k127_3763511_73 PFAM Chromosomal replication initiator DnaA domain - - - 0.000000000000000000000002778 106.0
SYD3_k127_3763511_74 Family of unknown function (DUF5330) - - - 0.00000000000000000001293 97.0
SYD3_k127_3763511_75 Protein of unknown function (DUF3309) - - - 0.000000000000000001362 88.0
SYD3_k127_3763511_76 - - - - 0.00000000001071 69.0
SYD3_k127_3763511_77 PilZ domain - - - 0.00000000004234 68.0
SYD3_k127_3763511_78 - - - - 0.000000004748 63.0
SYD3_k127_3763511_79 - - - - 0.00000006674 57.0
SYD3_k127_3763511_8 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 7.416e-195 622.0
SYD3_k127_3763511_80 - - - - 0.00006026 56.0
SYD3_k127_3763511_9 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 606.0
SYD3_k127_3818249_0 FAD linked oxidases, C-terminal domain - - - 0.0 1382.0
SYD3_k127_3818249_1 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 3.67e-208 659.0
SYD3_k127_3818249_2 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 599.0
SYD3_k127_3818249_3 Cobalamin-independent synthase, Catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003138 557.0
SYD3_k127_3818249_4 Cobalamin-independent synthase, Catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 479.0
SYD3_k127_3818249_5 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006556 417.0
SYD3_k127_3818249_6 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008319 408.0
SYD3_k127_3818249_7 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 404.0
SYD3_k127_3818249_8 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005622 385.0
SYD3_k127_388768_0 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008794 445.0
SYD3_k127_388768_1 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 426.0
SYD3_k127_3933200_0 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 525.0
SYD3_k127_3933200_1 TIM-barrel fold metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002653 285.0
SYD3_k127_3933200_2 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000007593 236.0
SYD3_k127_3933200_3 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000008348 124.0
SYD3_k127_3933200_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000004524 78.0
SYD3_k127_3954499_0 Tannase and feruloyl esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003851 590.0
SYD3_k127_3954499_1 Amidase K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 436.0
SYD3_k127_3954985_0 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009237 531.0
SYD3_k127_395955_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 495.0
SYD3_k127_4088266_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 426.0
SYD3_k127_4088266_1 Belongs to the mandelate racemase muconate lactonizing enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004569 354.0
SYD3_k127_4088266_2 Domain of unknown function (DUF4926) - - - 0.00000000000002637 75.0
SYD3_k127_409776_0 Putative transposase of IS4/5 family (DUF4096) K07492 - - 0.0000000000000000000000000000000000000000000000000000000002219 204.0
SYD3_k127_409776_1 Transposase DDE domain - - - 0.000000000000000000000000000000000000302 145.0
SYD3_k127_409776_2 - - - - 0.00000000000000000002734 94.0
SYD3_k127_4100111_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism K00990 GO:0006355,GO:0006464,GO:0006807,GO:0006808,GO:0007154,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0018175,GO:0018177,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070887,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0080090,GO:0090293,GO:1901564,GO:1901698,GO:1901699,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 2.7.7.59 0.0 1402.0
SYD3_k127_4100111_1 Alcohol dehydrogenase GroES-like domain K00001 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007627 455.0
SYD3_k127_4100111_2 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009236 291.0
SYD3_k127_4100111_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000002679 233.0
SYD3_k127_4100111_4 - - - - 0.0000000000000000000000000000000000000000001992 172.0
SYD3_k127_4100111_5 Flavoprotein involved in K transport - - - 0.00000000000000000000000001484 108.0
SYD3_k127_4100111_6 Penicillin-binding Protein K05366 - 2.4.1.129,3.4.16.4 0.00002552 51.0
SYD3_k127_4111820_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K00087 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 409.0
SYD3_k127_4133059_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K02337,K14162 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.0 1381.0
SYD3_k127_4133059_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.0 1163.0
SYD3_k127_4133059_10 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004352 328.0
SYD3_k127_4133059_11 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 307.0
SYD3_k127_4133059_12 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 299.0
SYD3_k127_4133059_13 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005902 287.0
SYD3_k127_4133059_14 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003878 292.0
SYD3_k127_4133059_15 Metallopeptidase family M24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004268 291.0
SYD3_k127_4133059_16 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002048 276.0
SYD3_k127_4133059_17 CO dehydrogenase flavoprotein domain protein K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000002033 272.0
SYD3_k127_4133059_18 Glutathione S-transferase, N-terminal domain K01800 - 5.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000001499 259.0
SYD3_k127_4133059_19 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005818 254.0
SYD3_k127_4133059_2 Hydrolase CocE NonD family K06978 - - 1.012e-282 877.0
SYD3_k127_4133059_20 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000414 249.0
SYD3_k127_4133059_21 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004169 250.0
SYD3_k127_4133059_22 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000006981 239.0
SYD3_k127_4133059_23 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000001206 231.0
SYD3_k127_4133059_24 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000003216 211.0
SYD3_k127_4133059_25 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000002329 191.0
SYD3_k127_4133059_26 Haem-degrading - - - 0.0000000000000000000000000000000000000000000000003746 182.0
SYD3_k127_4133059_27 - - - - 0.00000000000000000000000000000000000000000000001595 179.0
SYD3_k127_4133059_28 NMT1-like family K02051,K15553 - - 0.00000000000000000000000000000000000000005773 164.0
SYD3_k127_4133059_29 - - - - 0.0000000000000000000000000000000000000002168 153.0
SYD3_k127_4133059_3 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K15509 - 1.1.1.308 2.042e-220 694.0
SYD3_k127_4133059_30 Scavenger mRNA decapping enzyme C-term binding - - - 0.0000000000000000000000000000000000342 139.0
SYD3_k127_4133059_31 - - - - 0.00000000000000000000000000000006802 131.0
SYD3_k127_4133059_4 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 595.0
SYD3_k127_4133059_5 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002248 470.0
SYD3_k127_4133059_6 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 402.0
SYD3_k127_4133059_7 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006588 376.0
SYD3_k127_4133059_8 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005721 352.0
SYD3_k127_4133059_9 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015 - 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 347.0
SYD3_k127_4169857_0 B12 binding domain K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0019842,GO:0031419,GO:0032259,GO:0034641,GO:0035999,GO:0036094,GO:0036211,GO:0042084,GO:0042558,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050667,GO:0051186,GO:0071704,GO:0097159,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 0.0 1868.0
SYD3_k127_4169857_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 0.0 1119.0
SYD3_k127_4169857_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 391.0
SYD3_k127_4169857_11 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009380,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0071496,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 366.0
SYD3_k127_4169857_12 Extensin-like protein C-terminus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 358.0
SYD3_k127_4169857_13 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008988,GO:0009451,GO:0009987,GO:0010467,GO:0015976,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036307,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.266 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 332.0
SYD3_k127_4169857_14 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005705 309.0
SYD3_k127_4169857_15 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007448 306.0
SYD3_k127_4169857_16 Belongs to the RNase T2 family K01166,K01169 - 3.1.27.1,3.1.27.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006911 295.0
SYD3_k127_4169857_17 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 292.0
SYD3_k127_4169857_18 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007642 280.0
SYD3_k127_4169857_19 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002145 282.0
SYD3_k127_4169857_2 Domain of unknown function (DUF4403) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 547.0
SYD3_k127_4169857_20 Uncharacterised protein family UPF0066 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001357 253.0
SYD3_k127_4169857_21 Outer membrane protein beta-barrel domain K16079 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000003673 251.0
SYD3_k127_4169857_22 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000001386 237.0
SYD3_k127_4169857_23 Crp-like helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000001136 209.0
SYD3_k127_4169857_24 - - - - 0.00000000000000000000000000000000000000000000000002828 184.0
SYD3_k127_4169857_25 Outer membrane protein beta-barrel domain K16079 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000006973 177.0
SYD3_k127_4169857_26 Outer membrane protein beta-barrel domain K16079 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000003812 175.0
SYD3_k127_4169857_27 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000000000000000000002341 141.0
SYD3_k127_4169857_28 Uncharacterized conserved protein (DUF2277) - - - 0.000000000000000000000000000000000001575 141.0
SYD3_k127_4169857_29 - - - - 0.00000000000000000000000000000000002149 138.0
SYD3_k127_4169857_3 arsR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 481.0
SYD3_k127_4169857_30 - - - - 0.00000000000000000000000008034 111.0
SYD3_k127_4169857_31 - - - - 0.000000000000000000000008388 107.0
SYD3_k127_4169857_32 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000008707 82.0
SYD3_k127_4169857_33 - - - - 0.000001224 55.0
SYD3_k127_4169857_34 - - - - 0.000001322 53.0
SYD3_k127_4169857_4 Methylenetetrahydrofolate reductase K00297 GO:0003674,GO:0003824,GO:0004489,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 462.0
SYD3_k127_4169857_5 Protein of unknown function (DUF3829) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 438.0
SYD3_k127_4169857_6 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179,K06125 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 422.0
SYD3_k127_4169857_7 homocysteine K00547 - 2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 420.0
SYD3_k127_4169857_8 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003368 398.0
SYD3_k127_4169857_9 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008932 394.0
SYD3_k127_4230357_0 AAA domain K02282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004582 419.0
SYD3_k127_4230357_1 TIGRFAM pilus (Caulobacter type) biogenesis lipoprotein CpaD K02281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002753 248.0
SYD3_k127_4230357_2 Belongs to the GSP D family K02280 - - 0.00000000000000000000000000000000000000046 149.0
SYD3_k127_4239125_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007738 309.0
SYD3_k127_4239125_1 Uncharacterised protein family UPF0047 - - - 0.00002301 49.0
SYD3_k127_4277071_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2486.0
SYD3_k127_4277071_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046,K13797 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2384.0
SYD3_k127_4277071_10 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000003619 251.0
SYD3_k127_4277071_11 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000002776 256.0
SYD3_k127_4277071_12 MaoC like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000003519 231.0
SYD3_k127_4277071_13 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000000000000000000000007763 199.0
SYD3_k127_4277071_14 - - - - 0.0000000000000000000000000000000000000000000000000004112 190.0
SYD3_k127_4277071_15 Methyltransferase domain - - - 0.000000000000000000000000000000002271 139.0
SYD3_k127_4277071_16 PFAM Stem cell self-renewal protein Piwi - - - 0.00000000000000000005144 93.0
SYD3_k127_4277071_17 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000000000000000001117 90.0
SYD3_k127_4277071_18 PFAM Stem cell self-renewal protein Piwi - - - 0.00000000004282 72.0
SYD3_k127_4277071_19 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0000001998 56.0
SYD3_k127_4277071_2 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.0 1229.0
SYD3_k127_4277071_20 - - - - 0.0000003161 54.0
SYD3_k127_4277071_3 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 4.471e-320 1000.0
SYD3_k127_4277071_4 Peptidase dimerisation domain K01438 - 3.5.1.16 2.197e-245 763.0
SYD3_k127_4277071_5 Carbon monoxide dehydrogenase subunit G (CoxG) K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000432 474.0
SYD3_k127_4277071_6 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 393.0
SYD3_k127_4277071_7 FAD binding domain in molybdopterin dehydrogenase K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 327.0
SYD3_k127_4277071_8 Participates in transcription elongation, termination and antitermination K02601 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004394 306.0
SYD3_k127_4277071_9 UTRA domain K03710 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001439 281.0
SYD3_k127_4278565_0 Integrase core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 413.0
SYD3_k127_4278565_1 Bacterial dnaA protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002703 355.0
SYD3_k127_4299295_0 ABC-type branched-chain amino acid transport systems periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 599.0
SYD3_k127_4299295_1 peptidase, M24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003673 560.0
SYD3_k127_4299295_10 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000016 284.0
SYD3_k127_4299295_11 oxidation-reduction process - - - 0.0000000000000000000000000000000000000000000000000000000001156 209.0
SYD3_k127_4299295_12 Protein of unknown function (DUF3225) - - - 0.0000000000000000000000000000000000000000000000000000000008473 205.0
SYD3_k127_4299295_13 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.000000000000000000000000000000004608 130.0
SYD3_k127_4299295_14 Cytochrome c - - - 0.000000000000000000000000005331 115.0
SYD3_k127_4299295_15 - - - - 0.00000000000000002816 86.0
SYD3_k127_4299295_16 - - - - 0.000005543 54.0
SYD3_k127_4299295_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 473.0
SYD3_k127_4299295_3 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006106 419.0
SYD3_k127_4299295_4 TIGRFAM 3-oxoacid CoA-transferase, A subunit K01028 - 2.8.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008883 402.0
SYD3_k127_4299295_5 ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002443 391.0
SYD3_k127_4299295_6 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 384.0
SYD3_k127_4299295_7 Fumarylacetoacetate (FAA) hydrolase family K02509 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004915 379.0
SYD3_k127_4299295_8 Coenzyme A transferase K01029,K01035 - 2.8.3.5,2.8.3.8,2.8.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 365.0
SYD3_k127_4299295_9 Belongs to the HpcH HpaI aldolase family K01630,K02510 - 4.1.2.20,4.1.2.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008085 360.0
SYD3_k127_4299545_0 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 617.0
SYD3_k127_4299545_1 Responsible for the hydrolysis of barbituric acid (2,4,6-trihydroxy-1,3-pyrimidine), an intermediate in the oxidative catabolism of pyrimidines. Catalyzes the hydrolytic opening of the pyrimidine ring of barbituric acid to yield ureidomalonic acid K03383,K19794 - 3.5.2.1,3.5.2.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007434 476.0
SYD3_k127_4299545_10 ABC transporter, phosphonate, periplasmic substrate-binding protein K02051 - - 0.000000000000000000000000000000000000000000000000000000000003315 220.0
SYD3_k127_4299545_11 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000559 221.0
SYD3_k127_4299545_12 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000000000002486 215.0
SYD3_k127_4299545_13 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00000000000000000000000000000000000000000000000000000005583 205.0
SYD3_k127_4299545_14 Transcriptional regulator, gntR family - - - 0.0000000000000000000000000000000000000000000000000000007894 201.0
SYD3_k127_4299545_15 Isochorismatase family K09020 - 3.5.1.110 0.00000000000000000000000000000000000000000000000000009694 195.0
SYD3_k127_4299545_16 - - - - 0.000000000000000000000000000000000000000000003044 169.0
SYD3_k127_4299545_17 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000001626 129.0
SYD3_k127_4299545_18 EamA-like transporter family - - - 0.00001359 48.0
SYD3_k127_4299545_2 Amidohydrolase K07045,K14333,K15063,K20941 - 4.1.1.103,4.1.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005701 402.0
SYD3_k127_4299545_3 Belongs to the LDH2 MDH2 oxidoreductase family K00073 - 1.1.1.350 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009146 404.0
SYD3_k127_4299545_4 Amidase K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 404.0
SYD3_k127_4299545_5 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 393.0
SYD3_k127_4299545_6 PFAM amidohydrolase 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009262 307.0
SYD3_k127_4299545_7 anion transmembrane transporter activity K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000871 297.0
SYD3_k127_4299545_8 ABC-type nitrate sulfonate bicarbonate transport K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000507 280.0
SYD3_k127_4299545_9 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000001271 223.0
SYD3_k127_4299774_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0002790,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015627,GO:0015628,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:0098776,GO:1901265,GO:1901363,GO:1904680 - 0.0 1521.0
SYD3_k127_4299774_1 helicase superfamily c-terminal domain K17675 - 3.6.4.13 0.0 1335.0
SYD3_k127_4299774_10 Tyrosine recombinase XerD K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 416.0
SYD3_k127_4299774_11 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 378.0
SYD3_k127_4299774_12 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005995 347.0
SYD3_k127_4299774_13 Mo-co oxidoreductase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007607 360.0
SYD3_k127_4299774_14 Esterase-like activity of phytase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 339.0
SYD3_k127_4299774_15 PPIC-type PPIASE domain K01802,K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 314.0
SYD3_k127_4299774_16 CarD-like/TRCF domain K07736 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 309.0
SYD3_k127_4299774_17 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007801 302.0
SYD3_k127_4299774_18 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000943 274.0
SYD3_k127_4299774_19 PFAM heat shock protein DnaJ domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002942 271.0
SYD3_k127_4299774_2 Cobalamin biosynthesis protein CobT VWA domain K09883 - 6.6.1.2 3.154e-299 928.0
SYD3_k127_4299774_20 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.0000000000000000000000000000000000000000000000000000000000000004289 221.0
SYD3_k127_4299774_21 NUDIX domain K03574 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000000002722 219.0
SYD3_k127_4299774_22 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.0000000000000000000000000000000000000000000000000000000000000851 219.0
SYD3_k127_4299774_23 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.000000000000000000000000000000000000000000000000000000458 199.0
SYD3_k127_4299774_24 Belongs to the BolA IbaG family K05527,K22066 GO:0006807,GO:0008150,GO:0008152,GO:0010467,GO:0019538,GO:0043170,GO:0044238,GO:0051604,GO:0071704,GO:0097428,GO:0106035,GO:1901564 - 0.000000000000000000000000000000000000000004738 155.0
SYD3_k127_4299774_25 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000007983 136.0
SYD3_k127_4299774_26 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.0000000000000000000000000000009001 123.0
SYD3_k127_4299774_27 Excinuclease ABC, C subunit K07461 - - 0.000000000000000000000000001761 121.0
SYD3_k127_4299774_28 S4 domain K04762 - - 0.000000000000000000000000003684 115.0
SYD3_k127_4299774_29 Protein of unknown function (DUF1178) - - - 0.000000000000000000000003928 104.0
SYD3_k127_4299774_3 Domain of unknown function DUF21 - - - 2.386e-225 704.0
SYD3_k127_4299774_30 - - - - 0.0000000000004818 70.0
SYD3_k127_4299774_4 Cobaltochelatase CobS subunit N terminal K09882 - 6.6.1.2 1.789e-200 628.0
SYD3_k127_4299774_5 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35 3.325e-198 624.0
SYD3_k127_4299774_6 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 514.0
SYD3_k127_4299774_7 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 496.0
SYD3_k127_4299774_8 ErfK YbiS YcfS YnhG family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 472.0
SYD3_k127_4299774_9 Carbon-nitrogen hydrolase K11206 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 418.0
SYD3_k127_4300906_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 390.0
SYD3_k127_4304153_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1229.0
SYD3_k127_4304153_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 402.0
SYD3_k127_4304153_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 349.0
SYD3_k127_4304153_3 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 298.0
SYD3_k127_4304153_4 membrane protein TerC - - - 0.00000000000000000000000000000000000000000000000000000000000000001256 235.0
SYD3_k127_4304153_5 oxidation-reduction process K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000000000000000000005154 205.0
SYD3_k127_4304153_6 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.0000000000000000000000000000000000000000000000000000000005245 208.0
SYD3_k127_4304153_7 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000004911 137.0
SYD3_k127_4304153_8 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01897 - 6.2.1.3 0.000000000000000000000000000000001225 146.0
SYD3_k127_4304153_9 - - - - 0.00001716 49.0
SYD3_k127_4304666_0 UDP-glucose 4-epimerase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 309.0
SYD3_k127_4304666_1 Domain of unknown function DUF87 K06915 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008984 284.0
SYD3_k127_430701_0 Redoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004769 275.0
SYD3_k127_430701_1 LysR substrate binding domain - - - 0.000000499 52.0
SYD3_k127_4321575_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 529.0
SYD3_k127_4321575_1 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 504.0
SYD3_k127_4333024_0 ABC transporter K06147,K18890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 541.0
SYD3_k127_4333024_1 Protein of unknown function (DUF1501) - - - 0.000000000000000000000000000000000000000000004935 164.0
SYD3_k127_4394721_0 Glycine radical K00656 - 2.3.1.54 0.0 1386.0
SYD3_k127_4394721_1 potassium ion transport K07085 - - 1.383e-295 912.0
SYD3_k127_4394721_10 PFAM MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003756 289.0
SYD3_k127_4394721_11 Ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000002884 230.0
SYD3_k127_4394721_12 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000001589 204.0
SYD3_k127_4394721_13 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000000000000000000000000000000000000000000000000003681 190.0
SYD3_k127_4394721_14 TonB C terminal K03832 - - 0.000000000000000000000000000000000009379 145.0
SYD3_k127_4394721_15 Ribosomal protein S21 K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000002812 116.0
SYD3_k127_4394721_16 Cold shock K03704 - - 0.0000000000000000000000000004437 115.0
SYD3_k127_4394721_17 - - - - 0.000000003995 61.0
SYD3_k127_4394721_18 response to peptide - - - 0.00001145 50.0
SYD3_k127_4394721_2 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K16090 - - 4.537e-275 868.0
SYD3_k127_4394721_3 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007808 551.0
SYD3_k127_4394721_4 Phosphate acetyl/butaryl transferase K00625,K00634 - 2.3.1.19,2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006753 472.0
SYD3_k127_4394721_5 Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009384 468.0
SYD3_k127_4394721_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002787 367.0
SYD3_k127_4394721_7 response to peptide - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005531 367.0
SYD3_k127_4394721_8 Formate/nitrite transporter K06212 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 344.0
SYD3_k127_4394721_9 PepSY-associated TM region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 334.0
SYD3_k127_4404071_0 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009635 437.0
SYD3_k127_4404071_1 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 420.0
SYD3_k127_4404071_2 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004564 337.0
SYD3_k127_4404071_3 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008409 258.0
SYD3_k127_4404071_4 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000001971 184.0
SYD3_k127_4404071_5 - - - - 0.0000000000000000000000000000000009748 139.0
SYD3_k127_4404071_6 cheY-homologous receiver domain - - - 0.0000000000000000000000114 106.0
SYD3_k127_4404071_7 - - - - 0.0000000000000002549 83.0
SYD3_k127_4433414_0 major facilitator superfamily - - - 0.0000000000000000000000001998 119.0
SYD3_k127_4433414_1 Major Facilitator Superfamily - - - 0.0000000007025 64.0
SYD3_k127_4476871_0 Bacterial regulatory protein, Fis family K02481,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 404.0
SYD3_k127_4476871_1 histidine kinase HAMP region domain protein K02482 - 2.7.13.3 0.0000000000000000000000000000000000009247 156.0
SYD3_k127_4476871_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07713 - - 0.000000000002433 77.0
SYD3_k127_4484375_0 Alpha-2-Macroglobulin K06894 - - 0.0 2228.0
SYD3_k127_4484375_1 Penicillin-Binding Protein C-terminus Family K05367 - 2.4.1.129 7.105e-265 834.0
SYD3_k127_4484375_10 Methionine synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 470.0
SYD3_k127_4484375_11 GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 468.0
SYD3_k127_4484375_12 ATPases associated with a variety of cellular activities K02028,K09972 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004462 450.0
SYD3_k127_4484375_13 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 374.0
SYD3_k127_4484375_14 Rhodanese Homology Domain K01011 GO:0003674,GO:0003824,GO:0004792,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0009605,GO:0009987,GO:0009991,GO:0016740,GO:0016782,GO:0016783,GO:0016784,GO:0031668,GO:0033554,GO:0034641,GO:0042221,GO:0042262,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046677,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:1901360 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006847 354.0
SYD3_k127_4484375_15 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 339.0
SYD3_k127_4484375_16 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 332.0
SYD3_k127_4484375_17 tRNA synthetases class II (A) K07050 GO:0000049,GO:0002161,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0097159,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 327.0
SYD3_k127_4484375_18 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006819 319.0
SYD3_k127_4484375_19 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 290.0
SYD3_k127_4484375_2 glycosyl transferase, family 39 - - - 1.88e-219 695.0
SYD3_k127_4484375_20 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 287.0
SYD3_k127_4484375_21 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001805 258.0
SYD3_k127_4484375_22 Acid phosphatase homologues K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000478 197.0
SYD3_k127_4484375_23 Lipid A Biosynthesis N-terminal domain - - - 0.0000000000000000000000000000000000000000000004539 168.0
SYD3_k127_4484375_24 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000034 156.0
SYD3_k127_4484375_25 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000007988 139.0
SYD3_k127_4484375_26 leucine import across plasma membrane K01997 - - 0.0002061 44.0
SYD3_k127_4484375_3 Pyridoxal-phosphate dependent enzyme K01738 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 597.0
SYD3_k127_4484375_4 cystathionine beta-lyase K01760 - 4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 588.0
SYD3_k127_4484375_5 Nicotinate phosphoribosyltransferase (NAPRTase) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 553.0
SYD3_k127_4484375_6 Belongs to the bacterial solute-binding protein 3 family K09969 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000896 519.0
SYD3_k127_4484375_7 amino acid ABC transporter K09970 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 509.0
SYD3_k127_4484375_8 Binding-protein-dependent transport system inner membrane component K09971 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007138 488.0
SYD3_k127_4484375_9 Creatinase/Prolidase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003626 482.0
SYD3_k127_4577501_0 Heat shock 70 kDa protein K04043 - - 0.0 1104.0
SYD3_k127_4577501_1 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 2.866e-264 822.0
SYD3_k127_4577501_10 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000461 477.0
SYD3_k127_4577501_11 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006019 456.0
SYD3_k127_4577501_12 LppC putative lipoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 437.0
SYD3_k127_4577501_13 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006096 414.0
SYD3_k127_4577501_14 Acetyltransferase (GNAT) domain K22310 - 2.3.2.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002459 413.0
SYD3_k127_4577501_15 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 413.0
SYD3_k127_4577501_16 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004421 391.0
SYD3_k127_4577501_17 MltA specific insert domain K08304 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 380.0
SYD3_k127_4577501_18 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006256 355.0
SYD3_k127_4577501_19 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000043 347.0
SYD3_k127_4577501_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 6.793e-254 785.0
SYD3_k127_4577501_20 imidazoleglycerol-phosphate dehydratase K00817,K01089,K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.9,3.1.3.15,4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 330.0
SYD3_k127_4577501_21 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 340.0
SYD3_k127_4577501_22 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 320.0
SYD3_k127_4577501_23 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 314.0
SYD3_k127_4577501_24 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005962 314.0
SYD3_k127_4577501_25 import inner membrane translocase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 303.0
SYD3_k127_4577501_26 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000003175 261.0
SYD3_k127_4577501_27 Siderophore biosynthesis protein domain K00663 - 2.3.1.82 0.000000000000000000000000000000000000000000000000000000000000000319 225.0
SYD3_k127_4577501_28 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000006059 216.0
SYD3_k127_4577501_29 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 GO:0002790,GO:0006457,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.0000000000000000000000000000000000000000000000000000000000008201 214.0
SYD3_k127_4577501_3 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 3.218e-233 728.0
SYD3_k127_4577501_30 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000009165 215.0
SYD3_k127_4577501_31 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000000000000000000000000000000000000000000001277 201.0
SYD3_k127_4577501_32 Smr domain - - - 0.00000000000000000000000000000000000000000000000001178 186.0
SYD3_k127_4577501_33 Uncharacterised protein family (UPF0093) K08973 - - 0.00000000000000000000000000000000000000000000000003333 181.0
SYD3_k127_4577501_34 - - - - 0.0000000000000000000000000000000000000000000000005233 188.0
SYD3_k127_4577501_35 Protein of unknown function (DUF2628) - - - 0.00000000000000000000000000000000000000004039 157.0
SYD3_k127_4577501_36 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000000000000000000001309 155.0
SYD3_k127_4577501_37 Phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.0000000000000000000000000000002958 126.0
SYD3_k127_4577501_38 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000004002 102.0
SYD3_k127_4577501_39 Protein affecting phage T7 exclusion by the F plasmid K07113 - - 0.00000000005509 71.0
SYD3_k127_4577501_4 His Kinase A (phosphoacceptor) domain - - - 1.375e-196 635.0
SYD3_k127_4577501_40 - - - - 0.0005555 44.0
SYD3_k127_4577501_5 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 592.0
SYD3_k127_4577501_6 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 553.0
SYD3_k127_4577501_7 Pantothenic acid kinase K00867 GO:0003674,GO:0003824,GO:0004594,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 516.0
SYD3_k127_4577501_8 Prokaryotic glutathione synthetase, N-terminal domain K01920 GO:0003674,GO:0003824,GO:0004363,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006518,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0019184,GO:0034641,GO:0042398,GO:0043043,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044424,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901564,GO:1901566,GO:1901576 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003441 512.0
SYD3_k127_4577501_9 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 484.0
SYD3_k127_4578696_0 Tripartite tricarboxylate transporter TctA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692 342.0
SYD3_k127_4578696_1 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000000000001536 119.0
SYD3_k127_458754_0 Elongation factor G, domain IV K02355 - - 0.0 1052.0
SYD3_k127_458754_1 DegT/DnrJ/EryC1/StrS aminotransferase family K00812 - 2.6.1.1 1.054e-215 674.0
SYD3_k127_458754_10 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 406.0
SYD3_k127_458754_11 Amidohydrolase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 408.0
SYD3_k127_458754_12 PFAM monooxygenase FAD-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009346 396.0
SYD3_k127_458754_13 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 376.0
SYD3_k127_458754_14 Belongs to the GST superfamily K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 353.0
SYD3_k127_458754_15 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 343.0
SYD3_k127_458754_16 cyclic-guanylate-specific phosphodiesterase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 334.0
SYD3_k127_458754_17 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 339.0
SYD3_k127_458754_18 ATPases associated with a variety of cellular activities K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 319.0
SYD3_k127_458754_19 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 303.0
SYD3_k127_458754_2 Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 539.0
SYD3_k127_458754_20 ATPases associated with a variety of cellular activities K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 300.0
SYD3_k127_458754_21 NMT1-like family K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004255 255.0
SYD3_k127_458754_22 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005818 254.0
SYD3_k127_458754_23 Short repeat of unknown function (DUF308) - - - 0.000000000000000000000000000000000000000000000000000000000000000000001064 241.0
SYD3_k127_458754_24 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000004222 183.0
SYD3_k127_458754_25 Domain of unknown function (DUF1330) - - - 0.0000000000000000000000000000000000000000000001076 175.0
SYD3_k127_458754_26 membrane - - - 0.00000000000000000000000000000000000000002564 156.0
SYD3_k127_458754_27 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000001255 151.0
SYD3_k127_458754_28 ABC transporter K01995 - - 0.000000000000000000000000000000000009827 148.0
SYD3_k127_458754_29 - - - - 0.00000000000000000008105 95.0
SYD3_k127_458754_3 Esterase of the alpha-beta hydrolase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000555 536.0
SYD3_k127_458754_30 - - - - 0.000000007406 66.0
SYD3_k127_458754_31 Tripartite tricarboxylate transporter TctB family - - - 0.0000002241 59.0
SYD3_k127_458754_4 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 475.0
SYD3_k127_458754_5 Glycosyltransferase family 87 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 477.0
SYD3_k127_458754_6 Glucose / Sorbosone dehydrogenase K00117,K21430 GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016901,GO:0019842,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0044464,GO:0046872,GO:0048037,GO:0048038,GO:0055114,GO:0070968,GO:0097159,GO:1901363 1.1.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 475.0
SYD3_k127_458754_7 PFAM cyclase family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 461.0
SYD3_k127_458754_8 Periplasmic binding protein domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 428.0
SYD3_k127_458754_9 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 409.0
SYD3_k127_4599173_0 Diguanylate cyclase - - - 5.731e-201 642.0
SYD3_k127_4717981_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 531.0
SYD3_k127_4717981_1 Multicopper oxidase - - - 0.00000000000000007073 80.0
SYD3_k127_472205_0 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 386.0
SYD3_k127_472205_1 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006071 371.0
SYD3_k127_472205_2 dehydrogenases and related proteins K00010 - 1.1.1.18,1.1.1.369 0.00000000000006455 73.0
SYD3_k127_4724785_0 Protein conserved in bacteria K09989 - - 2.032e-213 667.0
SYD3_k127_4724785_1 Glycosyl transferase family 41 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 623.0
SYD3_k127_4724785_10 - - - - 0.00000000000000000000000000000000001193 144.0
SYD3_k127_4724785_11 ChaB K06197 - - 0.00000000000000000006695 91.0
SYD3_k127_4724785_12 - K18642 - - 0.00000000000000000341 98.0
SYD3_k127_4724785_13 - - - - 0.000000000000000007554 85.0
SYD3_k127_4724785_14 Phage-related minor tail protein K18642 - - 0.0000000000000005227 92.0
SYD3_k127_4724785_15 - - - - 0.000000001814 62.0
SYD3_k127_4724785_16 flagellar basal body K02390 - - 0.0000004958 55.0
SYD3_k127_4724785_2 AAA domain (Cdc48 subfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005686 535.0
SYD3_k127_4724785_3 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003646 489.0
SYD3_k127_4724785_4 FAD dependent oxidoreductase K04755,K09471 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006945 461.0
SYD3_k127_4724785_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008084 252.0
SYD3_k127_4724785_6 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000000000000000000000000000000000000225 224.0
SYD3_k127_4724785_7 methionine sulfoxide reductase K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000001399 223.0
SYD3_k127_4724785_8 Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000002014 198.0
SYD3_k127_4724785_9 Phosphoglycerate mutase family K08296 - - 0.000000000000000000000000000000000000000000000000001406 190.0
SYD3_k127_4753529_0 Glycosyltransferase family 28 N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006287 398.0
SYD3_k127_4814043_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006826 518.0
SYD3_k127_4814043_1 mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006232 370.0
SYD3_k127_4814043_2 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001739 280.0
SYD3_k127_4830315_0 PFAM 4-hydroxyphenylacetate 3-hydroxylase K00483 - 1.14.14.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004068 295.0
SYD3_k127_4830315_1 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001527 246.0
SYD3_k127_4830315_2 Nuclear protein SET K07117 - - 0.0000000000000000000000000000000000000000000001807 172.0
SYD3_k127_4830315_3 proline dipeptidase activity K01262 - 3.4.11.9 0.000000000000000000000003088 116.0
SYD3_k127_4913475_0 CHASE2 K01768 - 4.6.1.1 0.0 1016.0
SYD3_k127_4913475_1 Dehydratase family K01687,K22186 - 4.2.1.82,4.2.1.9 3.299e-307 954.0
SYD3_k127_4913475_10 Putative FMN-binding domain K07734 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004778 329.0
SYD3_k127_4913475_11 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 327.0
SYD3_k127_4913475_12 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004873 280.0
SYD3_k127_4913475_13 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000009155 235.0
SYD3_k127_4913475_14 - - - - 0.00000000000000000000000000000000000000000000000000000000237 205.0
SYD3_k127_4913475_15 cytochrome b561 K12262 - - 0.00000000000000000000000000000000000000000000000001395 185.0
SYD3_k127_4913475_16 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000000000000000000000000000001952 164.0
SYD3_k127_4913475_17 Ribosomal L27 protein K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000005769 141.0
SYD3_k127_4913475_18 Recombinase zinc beta ribbon domain - - - 0.000000000002818 69.0
SYD3_k127_4913475_2 ABC transporter transmembrane region K06148 - - 6.397e-244 767.0
SYD3_k127_4913475_3 Extracellular solute-binding protein K02027 - - 9.554e-215 674.0
SYD3_k127_4913475_4 Belongs to the ABC transporter superfamily K02010,K10112 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007285 567.0
SYD3_k127_4913475_5 TIGRFAM type I secretion membrane fusion protein, HlyD family K02022 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008744 561.0
SYD3_k127_4913475_6 Binding-protein-dependent transport system inner membrane component K02025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003742 543.0
SYD3_k127_4913475_7 Binding-protein-dependent transport system inner membrane component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007175 516.0
SYD3_k127_4913475_8 Domain of unknown function (DUF4118) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006669 362.0
SYD3_k127_4913475_9 Enoyl-(Acyl carrier protein) reductase K00019,K18335 - 1.1.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 344.0
SYD3_k127_5103680_0 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 449.0
SYD3_k127_5103680_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009332 256.0
SYD3_k127_5103680_2 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000004626 240.0
SYD3_k127_5103680_3 Permease family - - - 0.000000000000000000000000000000000000000000000000000000000002835 219.0
SYD3_k127_5103680_4 LysR family - - - 0.0000000000000000000000000000000000000000000006938 177.0
SYD3_k127_5103680_5 NAD(P)H quinone oxidoreductase, PIG3 family K00344 - 1.6.5.5 0.0000000000000000000000000000000000021 145.0
SYD3_k127_5103680_6 endoribonuclease L-PSP - - - 0.000000000000000000000000000005284 124.0
SYD3_k127_5103680_7 NADP oxidoreductase coenzyme F420-dependent - - - 0.00000000000000000000009084 108.0
SYD3_k127_5103680_8 PFAM PspC domain K03973 - - 0.000000000000000000001048 100.0
SYD3_k127_5139208_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 1.911e-293 913.0
SYD3_k127_5139208_1 ABC-type oligopeptide transport system periplasmic component K13893 - - 5.926e-285 887.0
SYD3_k127_5139208_10 Type II/IV secretion system protein K02283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914 387.0
SYD3_k127_5139208_11 NlpC/P60 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 334.0
SYD3_k127_5139208_12 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007706 309.0
SYD3_k127_5139208_13 Cytidylyltransferase K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 310.0
SYD3_k127_5139208_14 Cytochrome c K08738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002748 246.0
SYD3_k127_5139208_15 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000002781 218.0
SYD3_k127_5139208_16 Thioredoxin - - - 0.000000000000000000000000000000000000004436 155.0
SYD3_k127_5139208_2 Oligopeptide/dipeptide transporter, C-terminal region K02031,K02032,K13896 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006857,GO:0008144,GO:0008150,GO:0015399,GO:0015405,GO:0015833,GO:0015893,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0035672,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0042626,GO:0042884,GO:0042886,GO:0042891,GO:0043167,GO:0043168,GO:0043492,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 4.141e-278 868.0
SYD3_k127_5139208_3 Acyl-CoA dehydrogenase, C-terminal domain K19966 - 3.13.1.4 1.32e-200 631.0
SYD3_k127_5139208_4 Binding-protein-dependent transport system inner membrane component K13894 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006857,GO:0008150,GO:0015833,GO:0015893,GO:0016020,GO:0022857,GO:0035672,GO:0042221,GO:0042493,GO:0042884,GO:0042886,GO:0042891,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944 - 1.321e-200 630.0
SYD3_k127_5139208_5 N-terminal TM domain of oligopeptide transport permease C K13895 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006857,GO:0008150,GO:0015833,GO:0015893,GO:0016020,GO:0035672,GO:0042221,GO:0042493,GO:0042884,GO:0042886,GO:0042891,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 583.0
SYD3_k127_5139208_6 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003347 575.0
SYD3_k127_5139208_7 Prephenate dehydratase K04518 - 4.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 456.0
SYD3_k127_5139208_8 Type II secretion system (T2SS), protein F K12511 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008512 439.0
SYD3_k127_5139208_9 Type II secretion system (T2SS), protein F K12510 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004727 399.0
SYD3_k127_5178668_0 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000002821 222.0
SYD3_k127_5178668_1 Tripartite tricarboxylate transporter TctB family - - - 0.000000000000000000000000000000005766 132.0
SYD3_k127_5178668_2 Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000002935 128.0
SYD3_k127_5195326_0 receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000007016 237.0
SYD3_k127_5195326_1 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000001696 222.0
SYD3_k127_5195326_2 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.0000000000000000002222 90.0
SYD3_k127_5364563_0 MmgE/PrpD family - - - 1.079e-241 752.0
SYD3_k127_5364563_1 Binding-protein-dependent transport system inner membrane component K02011 - - 3.065e-238 749.0
SYD3_k127_5364563_10 Amidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009895 580.0
SYD3_k127_5364563_11 LVIVD repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 559.0
SYD3_k127_5364563_12 TOBE domain K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005293 528.0
SYD3_k127_5364563_13 Bacterial extracellular solute-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005564 524.0
SYD3_k127_5364563_14 Dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 509.0
SYD3_k127_5364563_15 PFAM amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 503.0
SYD3_k127_5364563_16 DEAD DEAH box helicase domain protein K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008065 503.0
SYD3_k127_5364563_17 thiamine pyrophosphate protein TPP binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005206 489.0
SYD3_k127_5364563_18 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 432.0
SYD3_k127_5364563_19 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 427.0
SYD3_k127_5364563_2 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K03520 - 1.2.5.3 2.812e-224 719.0
SYD3_k127_5364563_20 Bacterial periplasmic substrate-binding proteins K02030,K10001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 397.0
SYD3_k127_5364563_21 Belongs to the enoyl-CoA hydratase isomerase family K01692,K11264 - 4.1.1.41,4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008584 383.0
SYD3_k127_5364563_22 ABC transporter K10004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005807 386.0
SYD3_k127_5364563_23 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005764 380.0
SYD3_k127_5364563_24 COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01039 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 369.0
SYD3_k127_5364563_25 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 365.0
SYD3_k127_5364563_26 COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit K01040 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 361.0
SYD3_k127_5364563_27 Methylenetetrahydrofolate reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006534 366.0
SYD3_k127_5364563_28 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 362.0
SYD3_k127_5364563_29 PFAM polysaccharide export protein K01991 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 362.0
SYD3_k127_5364563_3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01271 - 3.4.13.9 4.55e-222 695.0
SYD3_k127_5364563_30 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 357.0
SYD3_k127_5364563_31 Nitrile hydratase, alpha chain K01721 - 4.2.1.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005783 344.0
SYD3_k127_5364563_32 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005115 338.0
SYD3_k127_5364563_33 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 338.0
SYD3_k127_5364563_34 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K02029,K10002 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 337.0
SYD3_k127_5364563_35 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009104 325.0
SYD3_k127_5364563_36 TIGRFAM amine acid ABC transporter, permease protein, 3-TM region, His Glu Gln Arg opine family K02029,K10003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002668 324.0
SYD3_k127_5364563_37 ATPases associated with a variety of cellular activities K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005801 321.0
SYD3_k127_5364563_38 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 306.0
SYD3_k127_5364563_39 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007345 301.0
SYD3_k127_5364563_4 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 2.647e-211 666.0
SYD3_k127_5364563_40 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005281 296.0
SYD3_k127_5364563_41 NHase catalyzes the hydration of various nitrile compounds to the corresponding amides K20807 - 4.2.1.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000001148 267.0
SYD3_k127_5364563_42 Cobalamin synthesis protein cobW C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002531 271.0
SYD3_k127_5364563_43 ATPases associated with a variety of cellular activities K02049,K10831 GO:0003674,GO:0003824,GO:0005215,GO:0005342,GO:0005368,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0008150,GO:0008509,GO:0008514,GO:0008559,GO:0015075,GO:0015238,GO:0015399,GO:0015405,GO:0015411,GO:0015711,GO:0015734,GO:0015849,GO:0015893,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033283,GO:0034220,GO:0042221,GO:0042493,GO:0042623,GO:0042626,GO:0042908,GO:0042910,GO:0043492,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0072348,GO:0098656,GO:1901682,GO:1903825 3.6.3.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000004889 265.0
SYD3_k127_5364563_44 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000447 257.0
SYD3_k127_5364563_45 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000002117 221.0
SYD3_k127_5364563_46 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000000000000000000000000000000000004465 211.0
SYD3_k127_5364563_47 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000000000007493 194.0
SYD3_k127_5364563_48 protein involved in exopolysaccharide biosynthesis K16554 - - 0.0000000000000000000000000000000000000000000000005526 196.0
SYD3_k127_5364563_49 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000003501 171.0
SYD3_k127_5364563_5 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 598.0
SYD3_k127_5364563_50 Binding-protein-dependent transport system inner membrane component K02050,K15552 - - 0.00000000000000000000000000000000000000000001931 179.0
SYD3_k127_5364563_51 Binding-protein-dependent transport system inner membrane component K02050,K15552 - - 0.00000000000000000000000000000000000000000004814 170.0
SYD3_k127_5364563_52 Protein of unknown function (DUF983) - - - 0.00000000000000000000000000000000000000009551 154.0
SYD3_k127_5364563_53 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.00000000000000000000000000000000000001564 146.0
SYD3_k127_5364563_54 carbohydrate transport - - - 0.0000000000000000000000000000008022 136.0
SYD3_k127_5364563_55 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000004198 124.0
SYD3_k127_5364563_56 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000261 89.0
SYD3_k127_5364563_57 Phospholipase D. Active site motifs. K01115 - 3.1.4.4 0.00000000000322 69.0
SYD3_k127_5364563_58 NMT1/THI5 like K02051 - - 0.0000000006496 64.0
SYD3_k127_5364563_59 ABC transporter substrate-binding protein K02051,K15553 - - 0.0000003811 61.0
SYD3_k127_5364563_6 oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 586.0
SYD3_k127_5364563_60 Phospholipase D. Active site motifs. K01115 - 3.1.4.4 0.00000126 54.0
SYD3_k127_5364563_7 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003294 590.0
SYD3_k127_5364563_8 inositol 2-dehydrogenase activity K18106 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003297 576.0
SYD3_k127_5364563_9 carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008695 572.0
SYD3_k127_5400358_0 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.0 1612.0
SYD3_k127_5400358_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006493 457.0
SYD3_k127_5400358_2 Nitrate reductase delta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007606 347.0
SYD3_k127_5400358_3 - - - - 0.000000000000000000000000000000000000000000000000000000009236 201.0
SYD3_k127_5400358_4 Protein of unknown function (DUF3305) - - - 0.00000000000000000000000000000000000000000000000000000001022 203.0
SYD3_k127_5400358_5 Protein of unknown function (DUF3306) - - - 0.000000000000000000000000004216 119.0
SYD3_k127_5400358_6 TIGRFAM formate dehydrogenase region TAT target - - - 0.0000002278 55.0
SYD3_k127_5402256_0 AAA domain K02282 - - 9.517e-205 644.0
SYD3_k127_5402256_1 Type II/IV secretion system protein K02283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 514.0
SYD3_k127_5402256_2 TIGRFAM pilus (Caulobacter type) biogenesis lipoprotein CpaD K02281 - - 0.000005769 48.0
SYD3_k127_5417969_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005365 249.0
SYD3_k127_5417969_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000007178 186.0
SYD3_k127_5417969_2 Peptidase S8 K08651,K14645 - 3.4.21.66 0.00000000000000000000002233 104.0
SYD3_k127_5443705_0 Protein of unknown function (DUF3300) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003119 471.0
SYD3_k127_5443705_1 Protein of unknown function (DUF2950) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 318.0
SYD3_k127_5457472_0 Cytochrome c554 and c-prime - - - 0.0 1030.0
SYD3_k127_5457472_1 Animal haem peroxidase - - - 1.22e-299 930.0
SYD3_k127_5457472_10 Belongs to the bacterial solute-binding protein 3 family K09969 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 448.0
SYD3_k127_5457472_11 NMT1-like family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000083 445.0
SYD3_k127_5457472_12 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 403.0
SYD3_k127_5457472_14 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 306.0
SYD3_k127_5457472_15 Enoyl-CoA hydratase K13816 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 294.0
SYD3_k127_5457472_16 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002896 277.0
SYD3_k127_5457472_17 Bacterial protein of unknown function (DUF898) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006955 271.0
SYD3_k127_5457472_18 Glycosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004746 266.0
SYD3_k127_5457472_19 Protein of unknown function (DUF1499) - - - 0.000000000000000000000000000000000000000000000000000000000000000334 231.0
SYD3_k127_5457472_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 4.004e-294 914.0
SYD3_k127_5457472_20 Extensin-like protein C-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000005681 228.0
SYD3_k127_5457472_21 SOS response associated peptidase (SRAP) - - - 0.000000000000000000000000000000000000000000000000000000001092 205.0
SYD3_k127_5457472_22 OmpA-like transmembrane domain K16079 - - 0.000000000000000000000000000000000000000000000001492 183.0
SYD3_k127_5457472_23 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000002472 138.0
SYD3_k127_5457472_25 - - - - 0.0000000000000000000000004487 107.0
SYD3_k127_5457472_26 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000004964 112.0
SYD3_k127_5457472_28 EamA-like transporter family - - - 0.00002731 51.0
SYD3_k127_5457472_29 - - - - 0.0009684 46.0
SYD3_k127_5457472_3 AMP-binding enzyme C-terminal domain K00666,K02182,K20034 - 6.2.1.44,6.2.1.48 8.397e-286 884.0
SYD3_k127_5457472_4 Belongs to the IlvD Edd family - - - 4.207e-271 845.0
SYD3_k127_5457472_5 Putative diguanylate phosphodiesterase - - - 2.729e-269 847.0
SYD3_k127_5457472_6 His Kinase A (phosphoacceptor) domain K10715 - 2.7.13.3 4.423e-220 711.0
SYD3_k127_5457472_7 FAD linked oxidases, C-terminal domain K00102 GO:0000166,GO:0003674,GO:0003824,GO:0004457,GO:0004458,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006089,GO:0006091,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016053,GO:0016491,GO:0016614,GO:0016898,GO:0019249,GO:0019516,GO:0019752,GO:0022900,GO:0022904,GO:0030447,GO:0032787,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046394,GO:0048037,GO:0050660,GO:0050662,GO:0051990,GO:0055114,GO:0071704,GO:0071949,GO:0072330,GO:0097159,GO:0099615,GO:1901265,GO:1901363,GO:1901576,GO:1901615,GO:1901617 1.1.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 613.0
SYD3_k127_5457472_8 CorA-like Mg2+ transporter protein K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 472.0
SYD3_k127_5457472_9 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004449 458.0
SYD3_k127_5458010_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1040.0
SYD3_k127_5458010_1 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 558.0
SYD3_k127_5458010_10 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000000000000006014 217.0
SYD3_k127_5458010_11 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000003047 70.0
SYD3_k127_5458010_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008745 539.0
SYD3_k127_5458010_3 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 536.0
SYD3_k127_5458010_4 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002801 471.0
SYD3_k127_5458010_5 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009278 418.0
SYD3_k127_5458010_6 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 366.0
SYD3_k127_5458010_7 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 324.0
SYD3_k127_5458010_8 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003441 282.0
SYD3_k127_5458010_9 Cytidylyltransferase family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000000009558 248.0
SYD3_k127_5497949_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00122,K00335 - 1.17.1.9,1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006682 501.0
SYD3_k127_5497949_1 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 375.0
SYD3_k127_5497949_2 formate dehydrogenase (NAD+) activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 326.0
SYD3_k127_5516649_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009441 282.0
SYD3_k127_5516649_1 Peptidase M15 - - - 0.00000000000000000000000000000000000000000000000000000000000000005111 233.0
SYD3_k127_5516649_2 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) - - - 0.0000000000000000000000000003484 117.0
SYD3_k127_5516649_3 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases K00528 - 1.18.1.2,1.19.1.1 0.0002223 43.0
SYD3_k127_5529013_0 Pyruvate ferredoxin/flavodoxin oxidoreductase K04090 - 1.2.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 571.0
SYD3_k127_5533238_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 1.148e-271 843.0
SYD3_k127_5533238_1 Berberine and berberine like - - - 6.573e-261 824.0
SYD3_k127_5533238_10 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006849 438.0
SYD3_k127_5533238_11 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 446.0
SYD3_k127_5533238_12 ABC transporter K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008837 414.0
SYD3_k127_5533238_13 Phosphomethylpyrimidine kinase K00868 - 2.7.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004891 416.0
SYD3_k127_5533238_14 Polyphosphate kinase 2 (PPK2) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 368.0
SYD3_k127_5533238_15 TRAP transporter, solute receptor (TAXI family K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 348.0
SYD3_k127_5533238_16 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 326.0
SYD3_k127_5533238_17 PFAM Tripartite ATP-independent periplasmic transporter DctQ component K11689 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 311.0
SYD3_k127_5533238_18 ACT domain K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009349 287.0
SYD3_k127_5533238_19 Phosphatidylethanolamine-binding protein K06910 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000003435 208.0
SYD3_k127_5533238_2 TRAP transporter, 4TM 12TM fusion protein - - - 1.267e-253 799.0
SYD3_k127_5533238_20 PFAM NUDIX hydrolase - - - 0.0000000000000000000000000000000000000000000000007634 194.0
SYD3_k127_5533238_21 LTXXQ motif family protein K07803 - - 0.0000000000000000000000000000000002366 139.0
SYD3_k127_5533238_23 LTXXQ motif family protein K07803 - - 0.0000355 51.0
SYD3_k127_5533238_3 Tripartite ATP-independent periplasmic transporter, DctM component K11690 GO:0005575,GO:0016020,GO:0016021,GO:0031224,GO:0044425 - 1.941e-227 711.0
SYD3_k127_5533238_4 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 2.518e-215 692.0
SYD3_k127_5533238_5 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 1.628e-204 649.0
SYD3_k127_5533238_6 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 2.922e-195 612.0
SYD3_k127_5533238_7 Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 612.0
SYD3_k127_5533238_8 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 509.0
SYD3_k127_5533238_9 Bacterial extracellular solute-binding protein, family 7 K11688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 506.0
SYD3_k127_5539479_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009380,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0071496,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 4.53e-246 767.0
SYD3_k127_5539479_1 Catechol dioxygenase N terminus K03381 - 1.13.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 421.0
SYD3_k127_5539479_2 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 423.0
SYD3_k127_5539479_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004037 299.0
SYD3_k127_5539479_4 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000001352 243.0
SYD3_k127_5539479_5 MoaE protein K03635 - 2.8.1.12 0.0000000000000000000000000000000000000000000000000000000000000007269 222.0
SYD3_k127_5539479_6 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.000000000000000000000000000001144 124.0
SYD3_k127_5542681_0 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 0.0 1320.0
SYD3_k127_5542681_1 Protein of unknown function - - - 0.0 1082.0
SYD3_k127_5542681_10 Ami_3 K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 475.0
SYD3_k127_5542681_11 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003979 466.0
SYD3_k127_5542681_12 Aminotransferase class-V K04487 GO:0000096,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006464,GO:0006520,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016043,GO:0016226,GO:0016740,GO:0016782,GO:0016783,GO:0018130,GO:0018282,GO:0018283,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0022607,GO:0031071,GO:0031163,GO:0031974,GO:0031981,GO:0032324,GO:0034641,GO:0036211,GO:0042278,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043545,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0046983,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0065003,GO:0070013,GO:0071704,GO:0071840,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000401 428.0
SYD3_k127_5542681_13 Trypsin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 407.0
SYD3_k127_5542681_14 X-Pro dipeptidyl-peptidase (S15 family) K07018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000097 399.0
SYD3_k127_5542681_15 ATPases associated with a variety of cellular activities K09013 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0071840 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 377.0
SYD3_k127_5542681_16 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003149 377.0
SYD3_k127_5542681_17 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008914,GO:0016740,GO:0016746,GO:0016755,GO:0044424,GO:0044464,GO:0140096 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 349.0
SYD3_k127_5542681_18 Thioredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 350.0
SYD3_k127_5542681_19 Domain of unknown function (DUF892) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001905 257.0
SYD3_k127_5542681_2 COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component K09014 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009536,GO:0009842,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 - 1.002e-286 885.0
SYD3_k127_5542681_20 Uncharacterized protein conserved in bacteria (DUF2155) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000133 258.0
SYD3_k127_5542681_21 NADH ubiquinone oxidoreductase subunit NDUFA12 K00356 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000827 246.0
SYD3_k127_5542681_22 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000004144 222.0
SYD3_k127_5542681_23 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000005578 207.0
SYD3_k127_5542681_24 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 GO:0003674,GO:0003824,GO:0003989,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009305,GO:0009987,GO:0016049,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901576 - 0.0000000000000000000000000000000000000000000000007824 178.0
SYD3_k127_5542681_25 Uncharacterized protein family (UPF0051) K09015 - - 0.000000000000000000000000000003971 127.0
SYD3_k127_5542681_26 cheY-homologous receiver domain - - - 0.00000000000000000000001981 104.0
SYD3_k127_5542681_27 COG2940 Proteins containing SET domain K07117 - - 0.0000000000000000000614 96.0
SYD3_k127_5542681_28 - - - - 0.00000000000001689 74.0
SYD3_k127_5542681_29 - - - - 0.00000001108 62.0
SYD3_k127_5542681_3 Biotin carboxylase C-terminal domain K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 2.462e-253 786.0
SYD3_k127_5542681_4 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 4.409e-229 743.0
SYD3_k127_5542681_5 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 598.0
SYD3_k127_5542681_6 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 588.0
SYD3_k127_5542681_7 Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 572.0
SYD3_k127_5542681_8 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000442 551.0
SYD3_k127_5542681_9 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 494.0
SYD3_k127_5554398_0 Adenylate cyclase - - - 4.445e-246 769.0
SYD3_k127_5554398_1 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 480.0
SYD3_k127_5554398_10 Protein of unknown function (DUF4239) - - - 0.0000000000000000000000000000000000000000000000000000000000000000009563 237.0
SYD3_k127_5554398_11 PFAM extracellular solute-binding protein family 3 K02030,K09969,K10001 - - 0.000000000000000000000000000000000000000000000000000009307 201.0
SYD3_k127_5554398_12 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000001126 157.0
SYD3_k127_5554398_13 Transcriptional regulator - - - 0.000000000000000000000000000000000000001977 149.0
SYD3_k127_5554398_14 - - - - 0.000000000000000000000000000004853 121.0
SYD3_k127_5554398_15 - - - - 0.000000000000000000000000000109 126.0
SYD3_k127_5554398_16 - - - - 0.000000000000000000000000315 111.0
SYD3_k127_5554398_17 - - - - 0.0000000001064 72.0
SYD3_k127_5554398_2 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005002 421.0
SYD3_k127_5554398_3 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000893 384.0
SYD3_k127_5554398_4 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004865 358.0
SYD3_k127_5554398_5 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003606 316.0
SYD3_k127_5554398_6 ABC-type transport auxiliary lipoprotein component K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000779 326.0
SYD3_k127_5554398_7 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 314.0
SYD3_k127_5554398_8 Membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 311.0
SYD3_k127_5554398_9 histidine kinase HAMP region domain protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 321.0
SYD3_k127_5561050_0 PEP-CTERM motif - - - 0.0006183 48.0
SYD3_k127_5574373_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1026.0
SYD3_k127_5574373_1 Acetyl-CoA dehydrogenase C-terminal like K00248,K00249,K20035 - 1.3.8.1,1.3.8.7 8.182e-237 744.0
SYD3_k127_5574373_10 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009322 382.0
SYD3_k127_5574373_11 Protein of unknown function (DUF1194) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006267 362.0
SYD3_k127_5574373_12 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 GO:0003674,GO:0003824,GO:0004733,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016638,GO:0016641,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009594 317.0
SYD3_k127_5574373_13 transmembrane transcriptional regulator (Anti-sigma factor) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003294 284.0
SYD3_k127_5574373_14 PFAM ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001592 275.0
SYD3_k127_5574373_15 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001959 248.0
SYD3_k127_5574373_16 Phosphoglycerate mutase family K15634 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000008285 235.0
SYD3_k127_5574373_17 IS116 IS110 IS902 family - - - 0.0000000000000000000000000000000000000000000000000000000000005975 213.0
SYD3_k127_5574373_18 17 kDa outer membrane surface antigen - - - 0.00000000000000000000000000000000000002074 150.0
SYD3_k127_5574373_19 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000000000000000000000001427 132.0
SYD3_k127_5574373_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 1.736e-201 631.0
SYD3_k127_5574373_20 - - - - 0.0000000000000000009777 87.0
SYD3_k127_5574373_3 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004584 534.0
SYD3_k127_5574373_4 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K00557,K03215 - 2.1.1.190,2.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004211 513.0
SYD3_k127_5574373_5 Histone deacetylase domain K04768 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009595 475.0
SYD3_k127_5574373_6 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 460.0
SYD3_k127_5574373_7 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 424.0
SYD3_k127_5574373_8 Short-chain dehydrogenase reductase SDR K13775 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004561 403.0
SYD3_k127_5574373_9 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0006457,GO:0008150,GO:0009987 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007562 397.0
SYD3_k127_5588652_0 His Kinase A (phosphoacceptor) domain - - - 7.156e-207 676.0
SYD3_k127_5588652_1 AsmA-like C-terminal region K07289 - - 1.908e-200 644.0
SYD3_k127_5588652_10 Protein of unknown function (DUF1194) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004338 282.0
SYD3_k127_5588652_11 Phasin protein - - - 0.0000000000000000000000000000000000002838 146.0
SYD3_k127_5588652_12 coenzyme PQQ synthesis K06138 - - 0.00000000000000000009178 102.0
SYD3_k127_5588652_13 - - - - 0.0000000000000000001108 95.0
SYD3_k127_5588652_14 Phasin protein - - - 0.00000000000000002928 86.0
SYD3_k127_5588652_2 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 1.495e-195 617.0
SYD3_k127_5588652_3 Putative peptidoglycan binding domain K21470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 584.0
SYD3_k127_5588652_4 Iron-sulfur cluster-binding domain K06139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 467.0
SYD3_k127_5588652_5 Binding-protein-dependent transport system inner membrane component K11075 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015846,GO:0015847,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 426.0
SYD3_k127_5588652_6 Part of the ABC transporter complex potABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11076 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015846,GO:0015847,GO:0016020,GO:0016021,GO:0031224,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 412.0
SYD3_k127_5588652_7 Binding-protein-dependent transport system inner membrane component K11074 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015846,GO:0015847,GO:0016020,GO:0016021,GO:0031224,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006958 390.0
SYD3_k127_5588652_8 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137,K06138 - 1.3.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 389.0
SYD3_k127_5588652_9 May be involved in the transport of PQQ or its precursor to the periplasm K06136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 342.0
SYD3_k127_5589341_0 GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 4.023e-243 752.0
SYD3_k127_5589341_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007874 454.0
SYD3_k127_5589341_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000005094 224.0
SYD3_k127_5589341_11 Ribosomal protein S10p/S20e K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000001042 201.0
SYD3_k127_5589341_12 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000004388 204.0
SYD3_k127_5589341_13 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000001034 183.0
SYD3_k127_5589341_14 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000000000002811 171.0
SYD3_k127_5589341_15 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000002191 167.0
SYD3_k127_5589341_16 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000488 164.0
SYD3_k127_5589341_17 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000007829 157.0
SYD3_k127_5589341_18 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000003513 138.0
SYD3_k127_5589341_19 ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000002035 94.0
SYD3_k127_5589341_2 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 424.0
SYD3_k127_5589341_20 Ribosomal L29 protein K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000001015 99.0
SYD3_k127_5589341_21 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.000000000000000001563 84.0
SYD3_k127_5589341_3 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 389.0
SYD3_k127_5589341_4 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 347.0
SYD3_k127_5589341_5 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 334.0
SYD3_k127_5589341_6 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 289.0
SYD3_k127_5589341_7 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002953 274.0
SYD3_k127_5589341_8 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000008484 235.0
SYD3_k127_5589341_9 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000216 228.0
SYD3_k127_5609854_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1389.0
SYD3_k127_5609854_1 domain, Protein - - - 0.0 1089.0
SYD3_k127_5609854_10 Alcohol dehydrogenase GroES-like domain - - - 1.294e-203 640.0
SYD3_k127_5609854_11 acyl-CoA dehydrogenase K00252 - 1.3.8.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005095 603.0
SYD3_k127_5609854_12 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 608.0
SYD3_k127_5609854_13 Cytochrome D1 heme domain K19345 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003395 593.0
SYD3_k127_5609854_14 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 609.0
SYD3_k127_5609854_15 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 552.0
SYD3_k127_5609854_16 Acyl-CoA dehydrogenase, middle domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 551.0
SYD3_k127_5609854_17 COG1960 Acyl-CoA dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 491.0
SYD3_k127_5609854_18 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008431 482.0
SYD3_k127_5609854_19 Peptidase U32 K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004877 471.0
SYD3_k127_5609854_2 nitrite reductase K15864 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.2.1,1.7.99.1 0.0 1049.0
SYD3_k127_5609854_20 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003774 451.0
SYD3_k127_5609854_21 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003606 433.0
SYD3_k127_5609854_22 Major facilitator superfamily K03449 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009377 432.0
SYD3_k127_5609854_23 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 419.0
SYD3_k127_5609854_24 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 418.0
SYD3_k127_5609854_25 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 413.0
SYD3_k127_5609854_26 ATPases associated with a variety of cellular activities K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 410.0
SYD3_k127_5609854_27 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009005 405.0
SYD3_k127_5609854_28 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02472 - 1.1.1.336 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007084 400.0
SYD3_k127_5609854_29 overlaps another CDS with the same product name - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009334 370.0
SYD3_k127_5609854_3 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 2.747e-299 929.0
SYD3_k127_5609854_30 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 339.0
SYD3_k127_5609854_31 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 340.0
SYD3_k127_5609854_32 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000289 329.0
SYD3_k127_5609854_33 Pyrogallol hydroxytransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007091 327.0
SYD3_k127_5609854_34 CO dehydrogenase flavoprotein C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 328.0
SYD3_k127_5609854_35 PFAM peptidase U32 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 325.0
SYD3_k127_5609854_36 Vitamin k epoxide reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 316.0
SYD3_k127_5609854_37 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 309.0
SYD3_k127_5609854_38 KR domain K07535 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 296.0
SYD3_k127_5609854_39 cytochrome c oxidase (Subunit II) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002457 272.0
SYD3_k127_5609854_4 FMN_bind K19339,K19343 - - 2.408e-293 918.0
SYD3_k127_5609854_40 helix_turn_helix isocitrate lyase regulation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001832 266.0
SYD3_k127_5609854_41 Uncharacterised protein family (UPF0261) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001529 263.0
SYD3_k127_5609854_42 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000774 259.0
SYD3_k127_5609854_43 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006424 255.0
SYD3_k127_5609854_44 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001836 250.0
SYD3_k127_5609854_45 Phosphoenolpyruvate hydrolase-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005177 247.0
SYD3_k127_5609854_46 transcriptional regulator AsnC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000004362 237.0
SYD3_k127_5609854_47 signal sequence binding K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000003622 239.0
SYD3_k127_5609854_48 SIS domain K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000004418 230.0
SYD3_k127_5609854_49 COG1522 Transcriptional regulators - - - 0.000000000000000000000000000000000000000000000000000000000000567 215.0
SYD3_k127_5609854_5 Cytochrome C and Quinol oxidase polypeptide I K02274 - 1.9.3.1 1.027e-283 880.0
SYD3_k127_5609854_50 Crp-like helix-turn-helix domain K13642 - - 0.000000000000000000000000000000000000000000000000000000001376 209.0
SYD3_k127_5609854_51 - - - - 0.00000000000000000000000000000000000000000000000000000000452 206.0
SYD3_k127_5609854_52 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000003364 196.0
SYD3_k127_5609854_53 Thioesterase K18700 - 3.1.2.29 0.0000000000000000000000000000000000000000000000000000235 191.0
SYD3_k127_5609854_54 Domain of unknown function (DUF4202) - - - 0.000000000000000000000000000000000000000000000000002348 190.0
SYD3_k127_5609854_55 Molybdopterin-binding domain of aldehyde dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000251 186.0
SYD3_k127_5609854_56 Cytochrome c K08738 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000000000000000000000000000000003492 184.0
SYD3_k127_5609854_57 CbiX - - - 0.0000000000000000000000000000000000000000000006366 185.0
SYD3_k127_5609854_58 lipid carrier protein - - - 0.0000000000000000000000000000000005653 137.0
SYD3_k127_5609854_59 oxygen carrier activity K07216 - - 0.000000000000000000000000000000007194 131.0
SYD3_k127_5609854_6 Polysaccharide biosynthesis protein K13013 - - 8.983e-279 870.0
SYD3_k127_5609854_60 benzoate-CoA ligase K04105 - 6.2.1.25,6.2.1.27 0.00000000000000000000000000000008519 126.0
SYD3_k127_5609854_61 - - - - 0.000000000000000000000000000001161 128.0
SYD3_k127_5609854_62 - - - - 0.0000000000000000000000000004328 119.0
SYD3_k127_5609854_63 Iron-sulfur cluster assembly protein - - - 0.0000000000000000000000000007204 118.0
SYD3_k127_5609854_64 Cytochrome C oxidase, cbb3-type, subunit III K19344 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000002111 108.0
SYD3_k127_5609854_65 DoxX K15977 - - 0.000000000000000001569 91.0
SYD3_k127_5609854_66 - - - - 0.00000000000000004616 83.0
SYD3_k127_5609854_67 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 GO:0000287,GO:0003674,GO:0003824,GO:0004427,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0043167,GO:0043169,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0071944 3.6.1.1 0.00000000000001665 79.0
SYD3_k127_5609854_68 COG0657 Esterase lipase K01432 - 3.5.1.9 0.0000000007749 64.0
SYD3_k127_5609854_7 Cytochrome D1 heme domain - - - 1.317e-262 816.0
SYD3_k127_5609854_70 membrane - - - 0.00005684 46.0
SYD3_k127_5609854_8 4Fe-4S single cluster domain - - - 1.533e-209 660.0
SYD3_k127_5609854_9 Periplasmic binding protein domain K01999 - - 1.365e-208 658.0
SYD3_k127_5617626_0 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001689 270.0
SYD3_k127_5617626_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000006076 238.0
SYD3_k127_5618239_0 phosphogluconate dehydrogenase (decarboxylating) activity K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 367.0
SYD3_k127_5618239_1 Beta-lactamase superfamily domain - - - 0.00000000000000000005365 91.0
SYD3_k127_5657567_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.3.2.2 1.006e-234 731.0
SYD3_k127_5657567_1 FAD dependent oxidoreductase K00285 - 1.4.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 456.0
SYD3_k127_5657567_2 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008277 351.0
SYD3_k127_5657567_3 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 320.0
SYD3_k127_5657567_4 membrane protein TerC - - - 0.00000000000000000000000003559 108.0
SYD3_k127_5657567_5 KTSC domain - - - 0.00000004551 55.0
SYD3_k127_5705631_0 Penicillin-binding Protein K05366 - 2.4.1.129,3.4.16.4 8.304e-283 881.0
SYD3_k127_5705631_1 PHB de-polymerase C-terminus K05973 - 3.1.1.75 9.39e-210 666.0
SYD3_k127_5705631_10 DNA repair protein MmcB-like - - - 0.0000000000000000000000000000000000000000000000000000000000000101 221.0
SYD3_k127_5705631_11 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000004599 184.0
SYD3_k127_5705631_2 His Kinase A (phosphoacceptor) domain K15011 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007708 546.0
SYD3_k127_5705631_3 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009347 416.0
SYD3_k127_5705631_4 Major Facilitator Superfamily K07552 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 384.0
SYD3_k127_5705631_5 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 374.0
SYD3_k127_5705631_6 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 339.0
SYD3_k127_5705631_7 Acyl-CoA dehydrogenase, middle domain K00252 - 1.3.8.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 301.0
SYD3_k127_5705631_8 alpha/beta hydrolase fold K01432 - 3.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 298.0
SYD3_k127_5705631_9 Bacterial regulatory protein, Fis family K15012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 283.0
SYD3_k127_5708018_0 homolog of phage Mu protein gp47 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 587.0
SYD3_k127_5714502_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.0 1255.0
SYD3_k127_5714502_1 Probable molybdopterin binding domain K07141 - 2.7.7.76 9.628e-231 732.0
SYD3_k127_5714502_10 Major Facilitator Superfamily K08167 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 403.0
SYD3_k127_5714502_11 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007966 389.0
SYD3_k127_5714502_12 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 353.0
SYD3_k127_5714502_13 helix_turn_helix, arabinose operon control protein K18954 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009714 343.0
SYD3_k127_5714502_14 XdhC Rossmann domain K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 328.0
SYD3_k127_5714502_15 Serine aminopeptidase, S33 K01055 - 3.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007683 314.0
SYD3_k127_5714502_16 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 295.0
SYD3_k127_5714502_17 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001353 274.0
SYD3_k127_5714502_18 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 - 1.13.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000001518 257.0
SYD3_k127_5714502_19 Carbon monoxide dehydrogenase subunit G (CoxG) K09386 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002154 250.0
SYD3_k127_5714502_2 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007154 563.0
SYD3_k127_5714502_20 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003076 255.0
SYD3_k127_5714502_21 Bacterial transcriptional repressor C-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000002514 219.0
SYD3_k127_5714502_22 Cellulose biosynthesis protein BcsS - - - 0.0000000000000000000000000000000000000000000000000000000005366 210.0
SYD3_k127_5714502_23 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.000000000000000000000000000000000000000000000000000000001719 202.0
SYD3_k127_5714502_24 XdhC and CoxI family - - - 0.0000000000000000000000000000000000000000000000000000001042 197.0
SYD3_k127_5714502_25 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000003931 169.0
SYD3_k127_5714502_27 - - - - 0.00006187 52.0
SYD3_k127_5714502_3 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003892 528.0
SYD3_k127_5714502_4 AAA domain (dynein-related subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 494.0
SYD3_k127_5714502_5 VWA domain containing CoxE-like protein K07161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 498.0
SYD3_k127_5714502_6 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009291 499.0
SYD3_k127_5714502_7 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008216 493.0
SYD3_k127_5714502_8 Belongs to the binding-protein-dependent transport system permease family K01997 GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015175,GO:0015179,GO:0015188,GO:0015190,GO:0015192,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015820,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0043090,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0089718,GO:0098655,GO:0098656,GO:0098657,GO:0098713,GO:0098739,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004036 487.0
SYD3_k127_5714502_9 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009997 415.0
SYD3_k127_5744503_0 haemagglutination activity domain - - - 0.00000000000000000000000000000000000000003458 165.0
SYD3_k127_5767229_0 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001435 276.0
SYD3_k127_5767229_1 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000007917 217.0
SYD3_k127_5767229_2 ETC complex I subunit conserved region K00329 - 1.6.5.3 0.000000000000000000000000000000000000000004788 156.0
SYD3_k127_5767229_3 sequence-specific DNA binding - - - 0.000019 51.0
SYD3_k127_5865947_0 Patatin phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008571 529.0
SYD3_k127_5865947_1 Major Facilitator Superfamily K08224 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 514.0
SYD3_k127_5865947_2 KR domain K00019 - 1.1.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 410.0
SYD3_k127_5865947_3 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003239 274.0
SYD3_k127_5865947_4 DoxX K15977 - - 0.000000000000000000000000000000000000000000000000000000000002309 213.0
SYD3_k127_5865947_5 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000000007288 193.0
SYD3_k127_5865947_6 Bacterial transglutaminase-like cysteine proteinase BTLCP - - - 0.00000000000000000000000002765 116.0
SYD3_k127_5873914_0 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009549 505.0
SYD3_k127_5873914_1 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 463.0
SYD3_k127_5873914_2 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 391.0
SYD3_k127_5873914_3 ATPases associated with a variety of cellular activities K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 370.0
SYD3_k127_5873914_4 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000006118 267.0
SYD3_k127_5873914_5 Periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000007659 219.0
SYD3_k127_5873914_6 MoeA C-terminal region (domain IV) K03750 - 2.10.1.1 0.00000000000000000000000005832 108.0
SYD3_k127_5943837_0 transferase K01028 - 2.8.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 428.0
SYD3_k127_5943837_1 transferase K01029 - 2.8.3.5 0.0000000000000000000000000000000000000003511 154.0
SYD3_k127_5965303_0 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 320.0
SYD3_k127_5965303_1 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000002801 207.0
SYD3_k127_5965303_2 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000003741 108.0
SYD3_k127_5965303_3 Binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000005122 98.0
SYD3_k127_5985994_0 PFAM alpha-2-macroglobulin domain protein K06894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 404.0
SYD3_k127_5997109_0 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000007447 123.0
SYD3_k127_5997109_1 Histidine kinase-like ATPase domain - - - 0.00000000000000000000000000272 122.0
SYD3_k127_5997109_2 transporter antisigma-factor antagonist STAS K04749 - - 0.00000000000838 68.0
SYD3_k127_6029038_0 helix_turn_helix ASNC type K05800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004732 254.0
SYD3_k127_6029038_1 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000001641 263.0
SYD3_k127_6029038_2 Type IV leader peptidase family K02278 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000002796 218.0
SYD3_k127_6029038_3 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000008424 220.0
SYD3_k127_6029038_4 pilus assembly protein CpaB K02279 - - 0.00000000000000000000000000000000000000000000009621 173.0
SYD3_k127_6029038_5 Flp pilus assembly protein secretin CpaC - - - 0.000000000000000000000000000000000000000000003701 170.0
SYD3_k127_6029038_6 TadE-like protein - - - 0.0000000000000000000000000000000000000003244 156.0
SYD3_k127_6029038_7 TadE-like protein K02651 - - 0.00000000000000000000000005149 114.0
SYD3_k127_6029038_8 TadE-like protein K02651 - - 0.00000000000004554 78.0
SYD3_k127_605865_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 430.0
SYD3_k127_6085899_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.0 1190.0
SYD3_k127_6085899_1 Penicillin-binding Protein K03587 - 3.4.16.4 3.434e-273 853.0
SYD3_k127_6085899_10 Cell cycle protein K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 554.0
SYD3_k127_6085899_11 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 545.0
SYD3_k127_6085899_12 Belongs to the D-alanine--D-alanine ligase family K00075,K01921 - 1.3.1.98,6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005972 467.0
SYD3_k127_6085899_13 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 439.0
SYD3_k127_6085899_14 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006217 421.0
SYD3_k127_6085899_15 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006254 425.0
SYD3_k127_6085899_16 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003127 420.0
SYD3_k127_6085899_17 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007615 409.0
SYD3_k127_6085899_18 N-acetylmuramoyl-L-alanine amidase (Family 2) K01447,K03806 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008618 340.0
SYD3_k127_6085899_19 3-demethylubiquinone-9 3-methyltransferase K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004183 304.0
SYD3_k127_6085899_2 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 3.216e-261 820.0
SYD3_k127_6085899_20 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004161 291.0
SYD3_k127_6085899_21 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008714 291.0
SYD3_k127_6085899_22 Essential cell division protein K03589 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 289.0
SYD3_k127_6085899_23 MraZ protein, putative antitoxin-like K03925 - - 0.000000000000000000000000000000000000000000000000000000000000004607 220.0
SYD3_k127_6085899_24 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000001318 154.0
SYD3_k127_6085899_25 secreted (periplasmic) protein - - - 0.00000000000000000000000000000001846 135.0
SYD3_k127_6085899_26 - - - - 0.00000000000000000002657 95.0
SYD3_k127_6085899_3 Belongs to the MurCDEF family K01924 - 6.3.2.8 2.876e-245 764.0
SYD3_k127_6085899_4 May be involved in recombinational repair of damaged DNA K03631 - - 3.023e-242 759.0
SYD3_k127_6085899_5 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 7.244e-234 737.0
SYD3_k127_6085899_6 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 4.158e-194 615.0
SYD3_k127_6085899_7 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005283 622.0
SYD3_k127_6085899_8 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01928,K01929,K15792 - 6.3.2.10,6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 607.0
SYD3_k127_6085899_9 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003546 585.0
SYD3_k127_6141435_0 AcrB/AcrD/AcrF family - - - 0.0 1549.0
SYD3_k127_6141435_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1148.0
SYD3_k127_6141435_10 Amidase K02433 - 6.3.5.6,6.3.5.7 4.732e-217 681.0
SYD3_k127_6141435_11 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 1.701e-216 674.0
SYD3_k127_6141435_12 Tripartite ATP-independent periplasmic transporter, DctM component - - - 1.684e-205 648.0
SYD3_k127_6141435_13 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009295 604.0
SYD3_k127_6141435_14 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 598.0
SYD3_k127_6141435_15 Cysteine-rich domain K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 587.0
SYD3_k127_6141435_16 AAA domain K07028 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005974 543.0
SYD3_k127_6141435_17 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000634 520.0
SYD3_k127_6141435_18 MacB-like periplasmic core domain K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 501.0
SYD3_k127_6141435_19 Glycosyl transferase, family 2 K20534 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 465.0
SYD3_k127_6141435_2 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 1.475e-302 932.0
SYD3_k127_6141435_20 Histidyl-tRNA synthetase K02502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 467.0
SYD3_k127_6141435_21 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006275 464.0
SYD3_k127_6141435_22 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009483 474.0
SYD3_k127_6141435_23 FAD binding domain K11472 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005621 447.0
SYD3_k127_6141435_24 NnrS protein K07234 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009847 431.0
SYD3_k127_6141435_25 Putative diguanylate phosphodiesterase K13593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005171 432.0
SYD3_k127_6141435_26 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003982 399.0
SYD3_k127_6141435_27 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007601 415.0
SYD3_k127_6141435_28 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 398.0
SYD3_k127_6141435_29 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 383.0
SYD3_k127_6141435_3 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 3.786e-269 834.0
SYD3_k127_6141435_30 Biotin-lipoyl like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 377.0
SYD3_k127_6141435_31 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009818 376.0
SYD3_k127_6141435_32 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007423 353.0
SYD3_k127_6141435_33 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005231 340.0
SYD3_k127_6141435_34 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000454 328.0
SYD3_k127_6141435_35 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 330.0
SYD3_k127_6141435_36 Bacterial protein of unknown function (Gcw_chp) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 323.0
SYD3_k127_6141435_37 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007244 314.0
SYD3_k127_6141435_38 ATPases associated with a variety of cellular activities K02003,K05685,K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 319.0
SYD3_k127_6141435_39 YdjC-like protein K03478 - 3.5.1.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 312.0
SYD3_k127_6141435_4 ABC transporter K02471 - - 3.917e-247 776.0
SYD3_k127_6141435_40 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004569 304.0
SYD3_k127_6141435_41 ErfK YbiS YcfS YnhG - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008386 282.0
SYD3_k127_6141435_42 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007856 288.0
SYD3_k127_6141435_43 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000524 268.0
SYD3_k127_6141435_44 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000001306 224.0
SYD3_k127_6141435_45 - - - - 0.000000000000000000000000000000000000000000000000000000000006241 218.0
SYD3_k127_6141435_46 Response regulator receiver K03413 - - 0.00000000000000000000000000000000000000000000000000000000001676 212.0
SYD3_k127_6141435_47 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000000000000001741 204.0
SYD3_k127_6141435_48 Cytochrome c K08738 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000000000000000000000000000000005407 186.0
SYD3_k127_6141435_49 Uncharacterized protein conserved in bacteria (DUF2076) K09945 - - 0.000000000000000000000000000000000000000000000000004572 191.0
SYD3_k127_6141435_5 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 1.211e-241 758.0
SYD3_k127_6141435_50 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000000000000000000003297 183.0
SYD3_k127_6141435_51 ATP-grasp domain K09181 - - 0.000000000000000000000000000000000000000000000001961 178.0
SYD3_k127_6141435_52 - - - - 0.000000000000000000000000000000000000000000000002501 180.0
SYD3_k127_6141435_53 Protein of unknown function (DUF992) - - - 0.000000000000000000000000000000000000000000007834 168.0
SYD3_k127_6141435_55 Chemotaxis phosphatase, CheZ K03414 - - 0.000000000000000000000000002059 122.0
SYD3_k127_6141435_56 NIPSNAP - - - 0.000000000000000000000000002864 115.0
SYD3_k127_6141435_57 SnoaL-like domain - - - 0.00000000000000003708 91.0
SYD3_k127_6141435_58 META domain - - - 0.00000000000000005141 86.0
SYD3_k127_6141435_59 - - - - 0.000000005574 58.0
SYD3_k127_6141435_6 Tripartite ATP-independent periplasmic transporter, DctM component - - - 7.854e-237 738.0
SYD3_k127_6141435_7 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 1.467e-227 709.0
SYD3_k127_6141435_8 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 2.084e-225 705.0
SYD3_k127_6141435_9 histidyl-tRNA aminoacylation K01892 - 6.1.1.21 2.719e-218 686.0
SYD3_k127_6177935_0 E1 component K00164 - 1.2.4.2 0.0 1673.0
SYD3_k127_6177935_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0 1075.0
SYD3_k127_6177935_10 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 1.239e-195 618.0
SYD3_k127_6177935_11 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 2.427e-194 614.0
SYD3_k127_6177935_12 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 575.0
SYD3_k127_6177935_13 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019752,GO:0030060,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 557.0
SYD3_k127_6177935_14 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 532.0
SYD3_k127_6177935_15 AFG1-like ATPase K06916 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0006091,GO:0006119,GO:0006123,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016310,GO:0017144,GO:0019538,GO:0019637,GO:0019646,GO:0019693,GO:0022900,GO:0022904,GO:0030163,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0034641,GO:0035694,GO:0042773,GO:0042775,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0071840,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008978 504.0
SYD3_k127_6177935_16 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 460.0
SYD3_k127_6177935_17 HlyD family secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 435.0
SYD3_k127_6177935_18 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005164 430.0
SYD3_k127_6177935_19 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007241 413.0
SYD3_k127_6177935_2 FtsX-like permease family K02004 - - 0.0 1055.0
SYD3_k127_6177935_20 Divergent polysaccharide deacetylase K09798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005017 378.0
SYD3_k127_6177935_21 ABC transporter K02003 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003479 336.0
SYD3_k127_6177935_22 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 312.0
SYD3_k127_6177935_23 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007933 284.0
SYD3_k127_6177935_24 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000000000000000000000000000000000000000000000000000000000017 271.0
SYD3_k127_6177935_25 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008145 261.0
SYD3_k127_6177935_26 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000001845 263.0
SYD3_k127_6177935_27 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000629 264.0
SYD3_k127_6177935_28 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007804 251.0
SYD3_k127_6177935_29 PFAM lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000118 254.0
SYD3_k127_6177935_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.386e-295 913.0
SYD3_k127_6177935_30 Domain of unknown function (DUF4337) - - - 0.000000000000000000000000000000000000000000000000000000000000001064 225.0
SYD3_k127_6177935_31 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000004922 208.0
SYD3_k127_6177935_32 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS - - - 0.00000000000000000000000000000000000000000000000000001139 193.0
SYD3_k127_6177935_33 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000000000000000000000000000009271 192.0
SYD3_k127_6177935_34 Produces ATP from ADP in the presence of a proton gradient across the membrane K02113,K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000000000000000004172 184.0
SYD3_k127_6177935_35 Small multidrug resistance protein K11741 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015893,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046618,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.0000000000000000000000000000000000000000000319 162.0
SYD3_k127_6177935_36 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000002047 154.0
SYD3_k127_6177935_37 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 0.00000001263 64.0
SYD3_k127_6177935_38 Inhibitor of apoptosis-promoting Bax1 K06890 - - 0.00000002273 56.0
SYD3_k127_6177935_39 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 0.0000002278 61.0
SYD3_k127_6177935_4 Glycosyl transferase family 21 K00694 - 2.4.1.12 3.923e-283 892.0
SYD3_k127_6177935_5 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 5.707e-280 880.0
SYD3_k127_6177935_6 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.611e-274 849.0
SYD3_k127_6177935_7 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 GO:0000166,GO:0003674,GO:0003824,GO:0004148,GO:0005488,GO:0005507,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009507,GO:0009536,GO:0010035,GO:0010038,GO:0016020,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0017076,GO:0019866,GO:0030554,GO:0030964,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0046686,GO:0046872,GO:0046914,GO:0048046,GO:0050896,GO:0050897,GO:0055114,GO:0070469,GO:0097159,GO:0097367,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.8.1.4 1.928e-236 738.0
SYD3_k127_6177935_8 tail specific protease K03797 - 3.4.21.102 3.684e-226 709.0
SYD3_k127_6177935_9 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5 9.21e-199 628.0
SYD3_k127_6191824_0 RES - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009512 249.0
SYD3_k127_6191824_1 Protein of unknown function (DUF2384) - - - 0.0000000000000000000000000000006155 123.0
SYD3_k127_6517497_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0 1179.0
SYD3_k127_6517497_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 2.078e-203 636.0
SYD3_k127_6517497_10 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 323.0
SYD3_k127_6517497_11 Diphthamide synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009142 309.0
SYD3_k127_6517497_12 Ribosomal RNA adenine dimethylase K00570 - 2.1.1.17,2.1.1.71 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 284.0
SYD3_k127_6517497_13 Etoposide-induced protein 2.4 (EI24) K06203 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005193 266.0
SYD3_k127_6517497_14 NAD(P)H-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002686 244.0
SYD3_k127_6517497_15 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043933,GO:0044085,GO:0065003,GO:0070925,GO:0071826,GO:0071840 - 0.00000000000000000000000000000000000000000000000000000000007467 205.0
SYD3_k127_6517497_16 Integral membrane protein (DUF2244) - - - 0.0000000000000000000000000000000000000000000000000000000115 202.0
SYD3_k127_6517497_17 Domain of unknown function (DUF1330) - - - 0.000000000000000000000000000000000000000000141 160.0
SYD3_k127_6517497_18 Ribosomal protein L35 K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000006944 124.0
SYD3_k127_6517497_2 AMP-binding enzyme C-terminal domain K01912 - 6.2.1.30 2.835e-199 630.0
SYD3_k127_6517497_3 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 582.0
SYD3_k127_6517497_4 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 561.0
SYD3_k127_6517497_5 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007953 440.0
SYD3_k127_6517497_6 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005195 389.0
SYD3_k127_6517497_7 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 358.0
SYD3_k127_6517497_8 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 355.0
SYD3_k127_6517497_9 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 343.0
SYD3_k127_6554620_0 FOG Transposase and inactivated derivatives K07495 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 508.0
SYD3_k127_6554620_1 PD-(D/E)XK nuclease superfamily K16899 - 3.6.4.12 0.00000000000001481 74.0
SYD3_k127_664783_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1150.0
SYD3_k127_664783_1 NLP P60 protein - - - 2.984e-272 852.0
SYD3_k127_664783_10 Belongs to the UPF0276 family K09930 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 400.0
SYD3_k127_664783_11 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 362.0
SYD3_k127_664783_12 EamA-like transporter family K15270 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 354.0
SYD3_k127_664783_13 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005422 347.0
SYD3_k127_664783_14 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004212 288.0
SYD3_k127_664783_15 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001013 271.0
SYD3_k127_664783_16 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003581 264.0
SYD3_k127_664783_17 Putative DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000007706 216.0
SYD3_k127_664783_18 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000004779 210.0
SYD3_k127_664783_19 Ureidoglycolate hydrolase - - - 0.00000000000000000000000000000000000000001473 158.0
SYD3_k127_664783_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 5.97e-271 856.0
SYD3_k127_664783_20 Predicted integral membrane protein (DUF2282) - - - 0.00000000000000000000000000000008818 129.0
SYD3_k127_664783_21 Universal stress protein family - - - 0.000000000000000000000000000003016 124.0
SYD3_k127_664783_22 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000005537 100.0
SYD3_k127_664783_23 - - - - 0.00000000000008681 78.0
SYD3_k127_664783_3 Family 4 glycosyl hydrolase K07406 - 3.2.1.22 2.338e-201 635.0
SYD3_k127_664783_4 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K05350 - 3.2.1.21 3.147e-195 619.0
SYD3_k127_664783_5 Beta-agarase K01219 - 3.2.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008345 518.0
SYD3_k127_664783_6 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 503.0
SYD3_k127_664783_7 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 461.0
SYD3_k127_664783_8 Linear amide C-N hydrolases, choloylglycine hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006088 424.0
SYD3_k127_664783_9 ABC transporter transmembrane region 2 K02471 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007378 419.0
SYD3_k127_6665921_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 8.552e-253 783.0
SYD3_k127_6665921_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 1.403e-208 649.0
SYD3_k127_6665921_2 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009857 291.0
SYD3_k127_6665921_3 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000002956 281.0
SYD3_k127_6665921_4 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000006582 235.0
SYD3_k127_6665921_5 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000008632 227.0
SYD3_k127_6665921_6 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000002647 215.0
SYD3_k127_6665921_7 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000003266 203.0
SYD3_k127_673295_0 PHP domain K02337 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.0 1704.0
SYD3_k127_673295_1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 0.0 1069.0
SYD3_k127_673295_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 1.153e-201 638.0
SYD3_k127_673295_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005862 587.0
SYD3_k127_673295_12 PFAM adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 549.0
SYD3_k127_673295_13 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004465 417.0
SYD3_k127_673295_14 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004653 366.0
SYD3_k127_673295_15 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 372.0
SYD3_k127_673295_16 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006807,GO:0006810,GO:0008104,GO:0008150,GO:0008152,GO:0015031,GO:0015399,GO:0015405,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0022804,GO:0022857,GO:0031224,GO:0032991,GO:0033036,GO:0042157,GO:0042160,GO:0042623,GO:0042626,GO:0042886,GO:0042953,GO:0043170,GO:0043190,GO:0043492,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901564,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 346.0
SYD3_k127_673295_17 HAD-hyrolase-like K01560 - 3.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000448 340.0
SYD3_k127_673295_18 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 350.0
SYD3_k127_673295_19 4Fe-4S dicluster domain K00338,K03941 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 324.0
SYD3_k127_673295_2 NADH-ubiquinone oxidoreductase subunit G, C-terminal K00336 - 1.6.5.3 0.0 1054.0
SYD3_k127_673295_20 Thioredoxin-like [2Fe-2S] ferredoxin K00334,K03943 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 325.0
SYD3_k127_673295_21 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 311.0
SYD3_k127_673295_22 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 288.0
SYD3_k127_673295_23 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K05606 - 5.1.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000004009 244.0
SYD3_k127_673295_24 Biotin protein ligase C terminal domain K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000008283 241.0
SYD3_k127_673295_25 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000518 216.0
SYD3_k127_673295_26 Thioesterase K18700 - 3.1.2.29 0.0000000000000000000000000000000000000000000000000000000000002123 215.0
SYD3_k127_673295_27 Domain of unkown function (DUF1775) K09796 - - 0.000000000000000000000000000000000000000000000000000002908 196.0
SYD3_k127_673295_28 Domain of unknown function (DUF3291) - - - 0.000000000000000000000000000000000000000000000000001139 190.0
SYD3_k127_673295_29 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000000000000000000000103 171.0
SYD3_k127_673295_3 Zn-dependent metallo-hydrolase RNA specificity domain K12574 - - 1.813e-262 821.0
SYD3_k127_673295_30 Domain of unknown function (DUF3291) - - - 0.0000000000000000000000000000000000000006599 158.0
SYD3_k127_673295_31 Copper resistance protein D K07245 - - 0.000000000000000000000000000005045 134.0
SYD3_k127_673295_32 Glyoxalase-like domain - - - 0.00000000000000000000000001012 113.0
SYD3_k127_673295_33 CopC domain K07156 - - 0.00000000000000000000000004387 114.0
SYD3_k127_673295_34 Protein of unknown function (DUF1467) - - - 0.0000000000000000001231 93.0
SYD3_k127_673295_35 - - - - 0.0000000000000000001274 95.0
SYD3_k127_673295_36 Protein of unknown function (DUF1036) - - - 0.0000001224 58.0
SYD3_k127_673295_38 - - - - 0.0007 43.0
SYD3_k127_673295_4 NADH-ubiquinone oxidoreductase chain 4, amino terminus K00342 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 7.462e-261 812.0
SYD3_k127_673295_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 4.562e-248 769.0
SYD3_k127_673295_6 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 4.061e-247 781.0
SYD3_k127_673295_7 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.15 2.686e-243 756.0
SYD3_k127_673295_8 Respiratory-chain NADH dehydrogenase, 49 Kd subunit K00333 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 1.34e-242 753.0
SYD3_k127_673295_9 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 6.594e-228 712.0
SYD3_k127_6762792_0 FAD linked oxidases, C-terminal domain K00004,K00102 GO:0003674,GO:0003824,GO:0004457,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008720,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0034641,GO:0034654,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046034,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.1.1.303,1.1.1.4,1.1.2.4 1.221e-205 649.0
SYD3_k127_6762792_1 AsmA-like C-terminal region K07289 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 605.0
SYD3_k127_6762792_10 - - - - 0.0000000000000000000000002566 109.0
SYD3_k127_6762792_11 - - - - 0.0000000000000001707 84.0
SYD3_k127_6762792_12 - - - - 0.0000000000004358 72.0
SYD3_k127_6762792_13 RHS Repeat - - - 0.000000000007794 71.0
SYD3_k127_6762792_14 FAD linked oxidases, C-terminal domain K00004,K00102 GO:0003674,GO:0003824,GO:0004457,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008720,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0034641,GO:0034654,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046034,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.1.1.303,1.1.1.4,1.1.2.4 0.000000003156 57.0
SYD3_k127_6762792_15 Participates in initiation and elongation during chromosome replication - - - 0.000002657 52.0
SYD3_k127_6762792_16 RHS protein - - - 0.000005122 53.0
SYD3_k127_6762792_17 Protein of unknown function - - - 0.000007611 51.0
SYD3_k127_6762792_18 RHS Repeat - - - 0.0000598 46.0
SYD3_k127_6762792_2 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 454.0
SYD3_k127_6762792_3 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005039 419.0
SYD3_k127_6762792_4 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 393.0
SYD3_k127_6762792_5 methyltransferase activity K21310 - 2.1.1.334 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004579 348.0
SYD3_k127_6762792_6 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 338.0
SYD3_k127_6762792_7 RHS Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006903 310.0
SYD3_k127_6762792_8 Protein of unknown function (DUF3455) - - - 0.0000000000000000000000000000000000000000000000001277 185.0
SYD3_k127_6762792_9 Ribbon-helix-helix domain - - - 0.0000000000000000000000000000004831 124.0
SYD3_k127_6813327_0 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000000000003486 157.0
SYD3_k127_6813327_1 Adenosine specific kinase K09129 - - 0.0000001862 54.0
SYD3_k127_681624_0 radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004564 457.0
SYD3_k127_681624_1 Protein of unknown function (DUF3750) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009289 282.0
SYD3_k127_681624_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005563 275.0
SYD3_k127_681624_3 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005015 264.0
SYD3_k127_681624_4 NADH flavin oxidoreductase NADH oxidase - - - 0.0000000000000000000000000000000000000000000000000000005099 196.0
SYD3_k127_681624_5 Protein conserved in bacteria K09931 - - 0.000000000000000000000000000000000000000000000000001105 190.0
SYD3_k127_6857897_0 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008822 322.0
SYD3_k127_6863795_0 Creatinase/Prolidase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007798 354.0
SYD3_k127_6863795_1 PFAM Hydantoinase B oxoprolinase K01474 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004334 318.0
SYD3_k127_6863795_2 TIR domain - - - 0.00000000000000000000000000000000000000000006166 173.0
SYD3_k127_6863795_3 NMT1-like family K02051 - - 0.0000000000000000000003504 108.0
SYD3_k127_6863795_4 Metallopeptidase family M24 - - - 0.0000000006273 71.0
SYD3_k127_6870976_0 Nucleoside-diphosphate-sugar epimerase K07276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 392.0
SYD3_k127_6870976_1 Sulfotransferase domain - - - 0.000000000000000000000000000000000000000000001031 176.0
SYD3_k127_6918109_0 hmm pf01609 - - - 6.748e-280 863.0
SYD3_k127_6918109_1 Protein of unknown function (DUF2865) - - - 0.0000000005733 59.0
SYD3_k127_6920135_0 ABC transporter K06147,K11085 - - 1.959e-260 814.0
SYD3_k127_6920135_1 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004785 492.0
SYD3_k127_6920135_10 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 351.0
SYD3_k127_6920135_11 Branched-chain amino acid ATP-binding cassette transporter K01995,K01997,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 347.0
SYD3_k127_6920135_12 4,5-dihydroxyphthalate decarboxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 304.0
SYD3_k127_6920135_13 heptosyltransferase K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000003361 227.0
SYD3_k127_6920135_14 Aldolase/RraA K02553,K10218 - 4.1.3.17 0.0000000000000000000000000000000000000000000000001126 180.0
SYD3_k127_6920135_15 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000002961 157.0
SYD3_k127_6920135_16 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000009311 130.0
SYD3_k127_6920135_17 Cupin domain - - - 0.00000000000001291 80.0
SYD3_k127_6920135_2 GlcNAc-PI de-N-acetylase K16515 - 4.2.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 477.0
SYD3_k127_6920135_3 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 454.0
SYD3_k127_6920135_4 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 454.0
SYD3_k127_6920135_5 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 402.0
SYD3_k127_6920135_6 PFAM glycosyl transferase family 9 K02841 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 365.0
SYD3_k127_6920135_7 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 355.0
SYD3_k127_6920135_8 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 355.0
SYD3_k127_6920135_9 Fumarylacetoacetate (FAA) hydrolase family K16165 - 3.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 347.0
SYD3_k127_6936589_0 PD-(D/E)XK nuclease superfamily - - - 3.963e-234 762.0
SYD3_k127_6936589_1 UvrD/REP helicase N-terminal domain - - - 0.0000000000000000000000000000000000000000000004054 173.0
SYD3_k127_6936589_2 TIGRFAM ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 - - 0.00002308 50.0
SYD3_k127_6955652_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 0.0 1070.0
SYD3_k127_6955652_1 Carboxyl transferase domain K01966 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016421,GO:0016874,GO:0016885,GO:0019752,GO:0031974,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0070013,GO:0071704,GO:0072329,GO:1901575 2.1.3.15,6.4.1.3 1.234e-271 839.0
SYD3_k127_6955652_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 614.0
SYD3_k127_6955652_3 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K17722 - 1.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 349.0
SYD3_k127_6955652_4 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000299 281.0
SYD3_k127_6955652_5 ATP12 chaperone protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005189 284.0
SYD3_k127_6955652_6 PFAM Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000001401 153.0
SYD3_k127_6991776_0 Domain of unknown function (DUF4175) - - - 6.406e-295 928.0
SYD3_k127_6991776_1 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 3.621e-234 734.0
SYD3_k127_6991776_10 DUF218 domain - - - 0.000000000000000000000000000000000000000000000000000000000005536 214.0
SYD3_k127_6991776_11 TIGRFAM MJ0042 family finger-like protein - - - 0.0000000000000000000000000000000000000000000228 173.0
SYD3_k127_6991776_12 Chorismate mutase type II - - - 0.000000000000000000005131 94.0
SYD3_k127_6991776_13 Thioredoxin-like - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000009705 49.0
SYD3_k127_6991776_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008836,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.20 1.765e-207 651.0
SYD3_k127_6991776_3 Aminotransferase class I and II K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 546.0
SYD3_k127_6991776_4 Prephenate dehydrogenase K00210,K00220,K04517 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008977,GO:0009058,GO:0009072,GO:0009073,GO:0009095,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019438,GO:0019752,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046983,GO:0047794,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0070403,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.3.1.12,1.3.1.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006556 482.0
SYD3_k127_6991776_5 ATPases associated with a variety of cellular activities K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 398.0
SYD3_k127_6991776_6 Uncharacterized protein conserved in bacteria (DUF2125) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 356.0
SYD3_k127_6991776_7 Cell division protein K09811 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 330.0
SYD3_k127_6991776_8 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 295.0
SYD3_k127_6991776_9 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides K07232 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005602 254.0
SYD3_k127_7106375_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001156 239.0
SYD3_k127_7106375_1 Cytochrome c - - - 0.00000000000000000000000000000003085 129.0
SYD3_k127_7116534_0 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000003332 202.0
SYD3_k127_7116534_1 - - - - 0.0000000000000000000002511 99.0
SYD3_k127_7144140_0 homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008666 455.0
SYD3_k127_7144140_1 PFAM Aminotransferase class I and II K14261 - - 0.00000000000000000000000000000000000000000000002463 171.0
SYD3_k127_7187969_0 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000000000000000001461 223.0
SYD3_k127_7187969_1 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000003095 188.0
SYD3_k127_7208617_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 1.901e-299 935.0
SYD3_k127_7208617_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 6.356e-299 936.0
SYD3_k127_7208617_10 COGs COG4299 conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 368.0
SYD3_k127_7208617_11 abc transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004455 361.0
SYD3_k127_7208617_12 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 357.0
SYD3_k127_7208617_13 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 342.0
SYD3_k127_7208617_14 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 338.0
SYD3_k127_7208617_15 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006212 331.0
SYD3_k127_7208617_16 ABC transporter K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004537 308.0
SYD3_k127_7208617_17 carbon monoxide dehydrogenase K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 302.0
SYD3_k127_7208617_18 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 292.0
SYD3_k127_7208617_19 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000159 278.0
SYD3_k127_7208617_2 Branched-chain amino acid transport system / permease component K01997,K01998 - - 5.03e-267 835.0
SYD3_k127_7208617_20 [2Fe-2S] binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000829 256.0
SYD3_k127_7208617_21 Domain of unknown function (DUF1932) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000101 260.0
SYD3_k127_7208617_22 N-acetylglucosaminylinositol deacetylase activity - - - 0.000000000000000000000000000000000000000000000000004557 193.0
SYD3_k127_7208617_23 helix_turn_helix multiple antibiotic resistance protein K22296 - - 0.0000000000000000000000000000000000000000000198 167.0
SYD3_k127_7208617_24 thiamine-containing compound biosynthetic process K02051 - - 0.0000000000000000000000000000000000000000001227 177.0
SYD3_k127_7208617_25 membrane transporter protein K07090 - - 0.000000000000000000000007691 103.0
SYD3_k127_7208617_3 Phytoene dehydrogenase-like oxidoreductase - - - 1.67e-203 651.0
SYD3_k127_7208617_4 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 610.0
SYD3_k127_7208617_5 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005252 533.0
SYD3_k127_7208617_6 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 454.0
SYD3_k127_7208617_7 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006499 449.0
SYD3_k127_7208617_8 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004981 449.0
SYD3_k127_7208617_9 Enoyl-CoA hydratase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 368.0
SYD3_k127_7264425_0 receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008301 374.0
SYD3_k127_7285703_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00123,K12527,K15022 - 1.17.1.10,1.17.1.9,1.97.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000007238 276.0
SYD3_k127_7285703_1 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.0000000000000000001011 94.0
SYD3_k127_7329661_0 ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007215 583.0
SYD3_k127_7329661_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 323.0
SYD3_k127_7329661_2 LysM domain - - - 0.000000000000000000000000000005831 122.0
SYD3_k127_7329661_3 Domain of unknown function (DUF4157) - - - 0.0000000000000000000002416 114.0
SYD3_k127_7329661_4 Late control gene D protein - - - 0.000000000002701 67.0
SYD3_k127_7329661_5 Protein of unknown function (DUF4255) - - - 0.00000000000667 66.0
SYD3_k127_733016_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 445.0
SYD3_k127_733016_1 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 0.00000000001081 65.0
SYD3_k127_7335713_0 - - - - 0.000000000000000000007891 100.0
SYD3_k127_7335713_1 Protein of unknown function (DUF616) - - - 0.00000002471 63.0
SYD3_k127_7362061_0 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.000000000000000000000000000000000000000000000000000000000008025 225.0
SYD3_k127_7362061_1 Major Facilitator Superfamily K11810 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000003237 58.0
SYD3_k127_7406029_0 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000004358 256.0
SYD3_k127_7436751_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1135.0
SYD3_k127_7436751_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 1.282e-250 794.0
SYD3_k127_7436751_10 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009026 436.0
SYD3_k127_7436751_11 Belongs to the 3-hydroxyisobutyrate dehydrogenase family K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 431.0
SYD3_k127_7436751_12 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 432.0
SYD3_k127_7436751_13 enoyl-CoA hydratase K01692,K05605 - 3.1.2.4,4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 405.0
SYD3_k127_7436751_14 Methyltransferase FkbM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007625 364.0
SYD3_k127_7436751_15 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 357.0
SYD3_k127_7436751_16 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases K00101,K15054 - 1.1.2.3,1.1.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004134 361.0
SYD3_k127_7436751_17 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 317.0
SYD3_k127_7436751_18 Winged helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004813 293.0
SYD3_k127_7436751_19 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006503 298.0
SYD3_k127_7436751_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 5.058e-238 742.0
SYD3_k127_7436751_20 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001782 269.0
SYD3_k127_7436751_21 Lumazine binding domain K00793 GO:0003674,GO:0003824,GO:0004746,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002796 269.0
SYD3_k127_7436751_22 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001367 248.0
SYD3_k127_7436751_23 RDD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000002418 239.0
SYD3_k127_7436751_24 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000000000000000000000000000000006051 190.0
SYD3_k127_7436751_25 SmpA / OmlA family - - - 0.0000000000000000000000000000000000000000000000000004812 191.0
SYD3_k127_7436751_26 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000000000000000000000000000118 184.0
SYD3_k127_7436751_27 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000000000000000000000000008018 185.0
SYD3_k127_7436751_28 Ubiquinol-cytochrome C chaperone K17662 - - 0.00000000000000000000000000000000000000000000004928 176.0
SYD3_k127_7436751_29 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000000000000000000000000001092 162.0
SYD3_k127_7436751_3 Reductase C-terminal K05297 - 1.18.1.1 5.145e-221 701.0
SYD3_k127_7436751_30 - - - - 0.0000000000000000000000000000000000000002181 156.0
SYD3_k127_7436751_31 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 GO:0003674,GO:0003824,GO:0004057,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016598,GO:0016740,GO:0016746,GO:0016755,GO:0019538,GO:0019941,GO:0030163,GO:0036211,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 2.3.2.29 0.000000000000000000001064 96.0
SYD3_k127_7436751_4 acyl-CoA dehydrogenase K00249 - 1.3.8.7 3.049e-194 626.0
SYD3_k127_7436751_5 Belongs to the ALAD family K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 564.0
SYD3_k127_7436751_6 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004926 545.0
SYD3_k127_7436751_7 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 518.0
SYD3_k127_7436751_8 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 500.0
SYD3_k127_7436751_9 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007829 474.0
SYD3_k127_7446238_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.894e-281 871.0
SYD3_k127_7446238_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 2.505e-257 796.0
SYD3_k127_7446238_2 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 580.0
SYD3_k127_7446238_3 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 379.0
SYD3_k127_7446238_4 copper-resistance protein, CopA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 370.0
SYD3_k127_7446238_5 - - - - 0.0000007834 58.0
SYD3_k127_7446986_0 Belongs to the peptidase S8 family K08651,K14645 - 3.4.21.66 1.403e-306 957.0
SYD3_k127_7505760_0 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 368.0
SYD3_k127_7505760_1 Sel1 domain protein repeat-containing protein K07126 - - 0.000000000000000000000000000000001095 132.0
SYD3_k127_7575784_0 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07484 - - 1.238e-288 892.0
SYD3_k127_7575784_1 IS66 Orf2 like protein K07484 - - 0.00000000000000000000000000000000000000000000000000000000000000007615 225.0
SYD3_k127_7575784_2 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07483 - - 0.000000000000000000000000003533 115.0
SYD3_k127_7584814_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 3.729e-311 972.0
SYD3_k127_7584814_1 LVIVD repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 528.0
SYD3_k127_7584814_10 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000001122 168.0
SYD3_k127_7584814_11 UPF0391 membrane protein - - - 0.00000000000000002656 82.0
SYD3_k127_7584814_12 - - - - 0.00000000005365 65.0
SYD3_k127_7584814_13 Membrane - - - 0.0003596 49.0
SYD3_k127_7584814_2 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006977 386.0
SYD3_k127_7584814_3 HWE histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 385.0
SYD3_k127_7584814_4 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 365.0
SYD3_k127_7584814_5 Kelch repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 319.0
SYD3_k127_7584814_6 DNA ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 316.0
SYD3_k127_7584814_7 myo-inosose-2 dehydratase activity K00457,K06606 - 1.13.11.27,5.3.99.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 305.0
SYD3_k127_7584814_8 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001583 278.0
SYD3_k127_7584814_9 Sugar (and other) transporter K08369 - - 0.0000000000000000000000000000000000000000000000000000000000001284 230.0
SYD3_k127_7648573_0 Amidohydrolase K07045,K14333,K15063,K20941 - 4.1.1.103,4.1.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003641 420.0
SYD3_k127_7648573_2 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000005847 173.0
SYD3_k127_7648573_3 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000001051 163.0
SYD3_k127_7648573_4 Domain of unknown function (DUF1330) - - - 0.00000000004577 64.0
SYD3_k127_77924_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1585.0
SYD3_k127_77924_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1409.0
SYD3_k127_77924_10 FAD binding domain K00480,K14974 - 1.14.13.1,1.14.13.114 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005574 599.0
SYD3_k127_77924_11 HpcH/HpaI aldolase/citrate lyase family K08691 GO:0003674,GO:0003824,GO:0005488,GO:0016829,GO:0016830,GO:0016833,GO:0043167,GO:0043169,GO:0046872,GO:0047777,GO:0050083 4.1.3.24,4.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007899 596.0
SYD3_k127_77924_12 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 589.0
SYD3_k127_77924_13 beta (1-6) glucans synthase K01210 - 3.2.1.58 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000375 586.0
SYD3_k127_77924_14 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042,K11528 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009401 579.0
SYD3_k127_77924_15 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 574.0
SYD3_k127_77924_16 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002911 546.0
SYD3_k127_77924_17 Taurine catabolism dioxygenase TauD, TfdA family K03119 - 1.14.11.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008089 538.0
SYD3_k127_77924_18 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005587 539.0
SYD3_k127_77924_19 Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 510.0
SYD3_k127_77924_2 Glycosyl transferase family 21 K00694,K01210 - 2.4.1.12,3.2.1.58 0.0 1282.0
SYD3_k127_77924_20 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 486.0
SYD3_k127_77924_21 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 482.0
SYD3_k127_77924_22 salicylate hydroxylase K00480,K22270 - 1.14.13.1,1.14.13.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 472.0
SYD3_k127_77924_23 FAD binding domain K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004514 458.0
SYD3_k127_77924_24 carnitine dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009413 433.0
SYD3_k127_77924_25 Amidohydrolase K10221 - 3.1.1.57 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 413.0
SYD3_k127_77924_26 DNA polymerase III delta prime subunit K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 389.0
SYD3_k127_77924_27 Alcohol dehydrogenase GroES-like domain K00055 - 1.1.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 387.0
SYD3_k127_77924_28 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 374.0
SYD3_k127_77924_29 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000908 367.0
SYD3_k127_77924_3 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 1.155e-313 974.0
SYD3_k127_77924_30 AMP-binding enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 372.0
SYD3_k127_77924_31 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 349.0
SYD3_k127_77924_32 GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 340.0
SYD3_k127_77924_33 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006514 325.0
SYD3_k127_77924_34 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000997 315.0
SYD3_k127_77924_35 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005434 306.0
SYD3_k127_77924_36 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008761 306.0
SYD3_k127_77924_37 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K09565 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 281.0
SYD3_k127_77924_38 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005553 283.0
SYD3_k127_77924_39 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001659 276.0
SYD3_k127_77924_4 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 2.102e-294 914.0
SYD3_k127_77924_40 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003173 271.0
SYD3_k127_77924_41 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002375 268.0
SYD3_k127_77924_42 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001018 267.0
SYD3_k127_77924_43 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000002062 255.0
SYD3_k127_77924_44 MarC family integral membrane protein K05595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003769 249.0
SYD3_k127_77924_45 Ankyrin repeats (3 copies) K06867 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006502 249.0
SYD3_k127_77924_46 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001613 254.0
SYD3_k127_77924_47 Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP K01004 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0050520,GO:0071704,GO:0090407,GO:1901576 2.7.8.24 0.00000000000000000000000000000000000000000000000000000000000000000000002803 247.0
SYD3_k127_77924_48 Invasion associated locus B - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006637 252.0
SYD3_k127_77924_49 Glycosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000003348 248.0
SYD3_k127_77924_5 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 4.951e-264 820.0
SYD3_k127_77924_50 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001287 241.0
SYD3_k127_77924_51 Glycosyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000004479 237.0
SYD3_k127_77924_52 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935,K02169 GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.197,6.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000024 229.0
SYD3_k127_77924_53 Ceramidase - - - 0.0000000000000000000000000000000000000000000000000000000001399 210.0
SYD3_k127_77924_54 Dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000003806 208.0
SYD3_k127_77924_55 - - - - 0.000000000000000000000000000000000000000000000000001357 190.0
SYD3_k127_77924_56 Hemimethylated DNA-binding protein YccV like K11940 - - 0.00000000000000000000000000000000000000000000001955 172.0
SYD3_k127_77924_57 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000000000003299 152.0
SYD3_k127_77924_58 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.00000000000000000000000000000000001101 140.0
SYD3_k127_77924_59 Belongs to the flagella basal body rod proteins family K02388 - - 0.00000000000000000000000000000008983 128.0
SYD3_k127_77924_6 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 8.068e-258 808.0
SYD3_k127_77924_60 Flavinator of succinate dehydrogenase K09159 - - 0.00000000000000000000000000199 116.0
SYD3_k127_77924_61 - - - - 0.00000000000000000006103 93.0
SYD3_k127_77924_62 Trypsin-like peptidase domain - - - 0.000000000000000002491 90.0
SYD3_k127_77924_63 Tfp pilus assembly protein FimV - - - 0.00000000000007081 82.0
SYD3_k127_77924_64 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.000000001133 64.0
SYD3_k127_77924_7 Belongs to the TPP enzyme family K01652 - 2.2.1.6 1.373e-253 820.0
SYD3_k127_77924_8 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 3.85e-238 741.0
SYD3_k127_77924_9 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 5.619e-225 736.0
SYD3_k127_7807079_0 cytochrome K17230 - - 0.000000000000000000000000000000000000000000000000000000000000002014 230.0
SYD3_k127_7860395_0 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005135 255.0
SYD3_k127_7860395_2 NMT1-like family - - - 0.000000835 50.0
SYD3_k127_7936675_0 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000005902 241.0
SYD3_k127_7936675_1 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000000000000009574 134.0
SYD3_k127_79730_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 1.069e-235 741.0
SYD3_k127_79730_1 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 544.0
SYD3_k127_79730_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000001876 252.0
SYD3_k127_79730_11 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.000000000000000000000000000000000000000173 153.0
SYD3_k127_79730_12 - - - - 0.00000000000000000000000000000001163 133.0
SYD3_k127_79730_13 BrnA antitoxin of type II toxin-antitoxin system - - - 0.0000000000000000005312 95.0
SYD3_k127_79730_14 Excinuclease ABC, C subunit K07461 - - 0.00000000000000006994 83.0
SYD3_k127_79730_15 Tetratricopeptide repeat - - - 0.000000000000003103 84.0
SYD3_k127_79730_16 endonuclease containing a URI domain K07461 - - 0.0000000008166 61.0
SYD3_k127_79730_17 Cysteine-rich secretory protein family - - - 0.00000001183 63.0
SYD3_k127_79730_2 Diguanylate cyclase, GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 471.0
SYD3_k127_79730_3 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 366.0
SYD3_k127_79730_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 362.0
SYD3_k127_79730_5 oxidation-reduction process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006346 337.0
SYD3_k127_79730_6 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004656 340.0
SYD3_k127_79730_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004403 292.0
SYD3_k127_79730_8 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 296.0
SYD3_k127_79730_9 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001771 293.0
SYD3_k127_7975539_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 440.0
SYD3_k127_7975539_1 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003653 419.0
SYD3_k127_8032199_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1297.0
SYD3_k127_8032199_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1067.0
SYD3_k127_8032199_10 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009139 312.0
SYD3_k127_8032199_11 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005011 283.0
SYD3_k127_8032199_12 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002801 282.0
SYD3_k127_8032199_13 Yip1 domain - - - 0.0000000000000000000000000000000000002785 147.0
SYD3_k127_8032199_14 - - - - 0.00000000000000000000000000006779 122.0
SYD3_k127_8032199_2 GMC oxidoreductase K00108 - 1.1.99.1 3.883e-243 761.0
SYD3_k127_8032199_3 COG3263 NhaP-type Na H and K H antiporters with a unique C-terminal domain K11105 - - 7.154e-227 717.0
SYD3_k127_8032199_4 acyl-CoA dehydrogenase - - - 1.01e-215 674.0
SYD3_k127_8032199_5 PFAM Prokaryotic protein of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000419 533.0
SYD3_k127_8032199_6 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008642 421.0
SYD3_k127_8032199_7 periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004344 349.0
SYD3_k127_8032199_8 Binding-protein-dependent transport system inner membrane component K02018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 340.0
SYD3_k127_8032199_9 Penicillin-insensitive murein endopeptidase K07261 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000298 319.0
SYD3_k127_8069938_0 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003592 442.0
SYD3_k127_8176029_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 5.43e-322 989.0
SYD3_k127_8176029_1 glutaminyl-tRNA synthetase K01886 - 6.1.1.18 2.555e-307 947.0
SYD3_k127_8176029_10 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00162,K00627 - 1.2.4.1,2.3.1.12 1.051e-206 651.0
SYD3_k127_8176029_11 Transketolase, pyrimidine binding domain K00162 - 1.2.4.1 6.798e-206 649.0
SYD3_k127_8176029_12 Peptidylprolyl isomerase K01802,K03770 - 5.2.1.8 6.645e-201 644.0
SYD3_k127_8176029_13 His Kinase A (phosphoacceptor) domain K07708 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 600.0
SYD3_k127_8176029_14 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000304 592.0
SYD3_k127_8176029_15 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 576.0
SYD3_k127_8176029_16 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003924,GO:0005488,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006417,GO:0006464,GO:0006468,GO:0006518,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006996,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016310,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018105,GO:0018193,GO:0018209,GO:0019001,GO:0019222,GO:0019538,GO:0019843,GO:0022411,GO:0030554,GO:0031323,GO:0031326,GO:0032268,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0032790,GO:0032984,GO:0032988,GO:0034248,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0036211,GO:0036289,GO:0043021,GO:0043022,GO:0043023,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0071826,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008,GO:2000112 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003255 580.0
SYD3_k127_8176029_17 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 552.0
SYD3_k127_8176029_18 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009517 539.0
SYD3_k127_8176029_19 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004989 515.0
SYD3_k127_8176029_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K13598 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.13.3 3.389e-297 931.0
SYD3_k127_8176029_20 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006063 498.0
SYD3_k127_8176029_21 MoeA C-terminal region (domain IV) K03750 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006464,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0018315,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0032324,GO:0034641,GO:0036211,GO:0042040,GO:0042278,GO:0042802,GO:0043170,GO:0043412,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061598,GO:0061599,GO:0070566,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 477.0
SYD3_k127_8176029_22 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 439.0
SYD3_k127_8176029_23 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 433.0
SYD3_k127_8176029_24 Methyltransferase fkbm family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 415.0
SYD3_k127_8176029_25 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031668,GO:0032991,GO:0032993,GO:0033554,GO:0043565,GO:0044212,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 3.4.21.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007451 400.0
SYD3_k127_8176029_26 Belongs to the TrpC family K01609,K13498 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48,5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 388.0
SYD3_k127_8176029_27 Beta-lactamase superfamily domain K06167 - 3.1.4.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004972 389.0
SYD3_k127_8176029_28 Amino-transferase class IV K00824 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009987,GO:0016053,GO:0016054,GO:0016740,GO:0016769,GO:0019478,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0046416,GO:0046437,GO:0047810,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 2.6.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 386.0
SYD3_k127_8176029_29 Phosphoribosyl-ATP pyrophosphohydrolase K02499,K04765 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009267,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042594,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 376.0
SYD3_k127_8176029_3 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 1.056e-269 850.0
SYD3_k127_8176029_30 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 352.0
SYD3_k127_8176029_31 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 347.0
SYD3_k127_8176029_32 Major Facilitator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005094 353.0
SYD3_k127_8176029_33 Peptidase C26 K01658,K01664 - 2.6.1.85,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 306.0
SYD3_k127_8176029_34 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003161 279.0
SYD3_k127_8176029_35 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000003783 259.0
SYD3_k127_8176029_36 Polyketide cyclase / dehydrase and lipid transport K18588 - - 0.000000000000000000000000000000000000000000000000000000000000000005038 228.0
SYD3_k127_8176029_37 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000005896 229.0
SYD3_k127_8176029_38 Belongs to the CinA family K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000003774 195.0
SYD3_k127_8176029_39 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0006807,GO:0008150,GO:0008152,GO:0009399,GO:0071941,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000000003263 162.0
SYD3_k127_8176029_4 Sigma-54 interaction domain K07712 - - 2.68e-261 811.0
SYD3_k127_8176029_40 Glutathione-dependent formaldehyde-activating - - - 0.0000000000000000000000000000000000000007415 154.0
SYD3_k127_8176029_41 Preprotein translocase SecG subunit K03075 - - 0.000000000000000000000000000000002242 132.0
SYD3_k127_8176029_42 Septum formation initiator - - - 0.00000000000000000000000000003715 119.0
SYD3_k127_8176029_5 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.8.1.4 2.591e-258 813.0
SYD3_k127_8176029_6 Sigma-54 interaction domain K13599 - - 9.828e-247 766.0
SYD3_k127_8176029_7 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 8.779e-244 768.0
SYD3_k127_8176029_8 Competence protein K02238 - - 1.533e-243 774.0
SYD3_k127_8176029_9 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.853e-222 695.0
SYD3_k127_8185872_0 Belongs to the ClpA ClpB family K03694 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043335,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 - 0.0 1367.0
SYD3_k127_8185872_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1238.0
SYD3_k127_8185872_10 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004344 437.0
SYD3_k127_8185872_11 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 431.0
SYD3_k127_8185872_12 Transglycosylase SLT domain K00786,K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 384.0
SYD3_k127_8185872_13 PFAM Glutathione S-transferase domain K11209 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 353.0
SYD3_k127_8185872_14 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002489 304.0
SYD3_k127_8185872_15 Domain of unknown function (DUF1849) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009024 288.0
SYD3_k127_8185872_16 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001069 273.0
SYD3_k127_8185872_17 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000001765 256.0
SYD3_k127_8185872_18 response regulator K11443 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005256 241.0
SYD3_k127_8185872_19 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000009566 233.0
SYD3_k127_8185872_2 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 GO:0000175,GO:0003674,GO:0003724,GO:0003824,GO:0004386,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008408,GO:0008997,GO:0009056,GO:0009057,GO:0009266,GO:0009409,GO:0009628,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016896,GO:0017111,GO:0019222,GO:0019439,GO:0034458,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - 0.0 1022.0
SYD3_k127_8185872_20 endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000000000000000000000392 233.0
SYD3_k127_8185872_21 AzlC protein - - - 0.000000000000000000000000000000000000000000000000000000000000000002178 235.0
SYD3_k127_8185872_22 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.000000000000000000000000000000000000000000000000000000000005428 220.0
SYD3_k127_8185872_23 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000000000000000000000000000000000269 207.0
SYD3_k127_8185872_24 - K09004 - - 0.000000000000000000000000000000000000000000000001474 177.0
SYD3_k127_8185872_25 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000001131 152.0
SYD3_k127_8185872_26 Branched-chain amino acid transport - - - 0.000000000000000000000000002468 125.0
SYD3_k127_8185872_27 Protein of unknown function (DUF3572) - - - 0.0000000000000000000000004881 108.0
SYD3_k127_8185872_28 Belongs to the bacterial ribosomal protein bL33 family K02913 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000004564 87.0
SYD3_k127_8185872_29 - - - - 0.000000000001617 70.0
SYD3_k127_8185872_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 8.005e-263 814.0
SYD3_k127_8185872_4 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 8.855e-259 804.0
SYD3_k127_8185872_5 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 2.028e-227 709.0
SYD3_k127_8185872_6 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 560.0
SYD3_k127_8185872_7 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002995 550.0
SYD3_k127_8185872_8 Peptidogalycan biosysnthesis/recognition K09919 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 524.0
SYD3_k127_8185872_9 DNA recombination-mediator protein A K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007096 457.0
SYD3_k127_8190847_0 His Kinase A (phosphoacceptor) domain - - - 1.314e-199 632.0
SYD3_k127_8190847_1 Patatin phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 466.0
SYD3_k127_8190847_2 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009283 318.0
SYD3_k127_8190847_3 Integrase - - - 0.00000002161 57.0
SYD3_k127_8190847_4 - - - - 0.000001449 50.0
SYD3_k127_8190847_5 Catalyzes the conversion of acetoacetate to acetone and carbon dioxide K01574 - 4.1.1.4 0.000001792 50.0
SYD3_k127_8202102_0 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005926 496.0
SYD3_k127_8202102_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692 490.0
SYD3_k127_8202102_2 Protein of unknown function (DUF1013) K09987 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004459 323.0
SYD3_k127_8202102_3 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008552 324.0
SYD3_k127_8202102_4 Uncharacterized ACR, COG1678 K07735 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001247 256.0
SYD3_k127_8202102_5 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000559 258.0
SYD3_k127_8202102_6 Disulphide bond corrector protein DsbC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009493 248.0
SYD3_k127_8202102_7 Redoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000001095 229.0
SYD3_k127_8202102_8 SPW repeat - - - 0.0000000000000004765 78.0
SYD3_k127_8216329_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0 2676.0
SYD3_k127_8216329_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.536e-317 984.0
SYD3_k127_8216329_10 Flavin containing amine oxidoreductase K21677 - 1.17.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 284.0
SYD3_k127_8216329_11 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01485,K01487,K11991 - 3.5.4.1,3.5.4.3,3.5.4.33 0.0000000000000000000000000000000000000000000000000000497 200.0
SYD3_k127_8216329_12 - - - - 0.0000000000000000000000000000000000003374 146.0
SYD3_k127_8216329_13 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.0000000000000000000000000000000000003752 153.0
SYD3_k127_8216329_14 LTXXQ motif family protein - - - 0.00000000000000000000004632 112.0
SYD3_k127_8216329_15 - - - - 0.000000000512 64.0
SYD3_k127_8216329_2 Squalene-hopene cyclase C-terminal domain K06045 - 4.2.1.129,5.4.99.17 1.418e-313 975.0
SYD3_k127_8216329_3 MMPL family K07003 - - 3.207e-311 972.0
SYD3_k127_8216329_4 Hopanoid biosynthesis associated RND transporter like protein HpnN K07003 - - 2.104e-302 950.0
SYD3_k127_8216329_5 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 4.713e-212 666.0
SYD3_k127_8216329_6 Hopanoid biosynthesis associated radical SAM protein HpnH - - - 7.756e-202 633.0
SYD3_k127_8216329_7 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007357 620.0
SYD3_k127_8216329_8 Cytochrome P450 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 514.0
SYD3_k127_8216329_9 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 461.0
SYD3_k127_8216333_0 Thiamine pyrophosphate enzyme, central domain - - - 8.777e-288 893.0
SYD3_k127_8216333_1 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 576.0
SYD3_k127_8216333_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 517.0
SYD3_k127_8216333_3 Belongs to the D-glutamate cyclase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 400.0
SYD3_k127_8216333_4 helix_turn_helix isocitrate lyase regulation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003328 374.0
SYD3_k127_8216333_5 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 367.0
SYD3_k127_8216333_6 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000005169 93.0
SYD3_k127_8216333_7 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000009972 85.0
SYD3_k127_8267495_0 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000007297 194.0
SYD3_k127_8267495_1 glucose sorbosone - - - 0.0000000000000000000000000000000001306 141.0
SYD3_k127_8267495_2 TonB-dependent Receptor Plug - - - 0.00001041 48.0
SYD3_k127_8296482_0 Thiamine pyrophosphate enzyme, central domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 479.0
SYD3_k127_8296482_1 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 0.000002897 49.0
SYD3_k127_8356809_0 Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004118 378.0
SYD3_k127_8356809_1 inositol 2-dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000001447 241.0
SYD3_k127_8428406_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006865 564.0
SYD3_k127_8428406_1 Belongs to the bacterial histone-like protein family K03530 - - 0.000000000000000000000000000000000000000004846 156.0
SYD3_k127_8428406_2 excinuclease ABC - - - 0.0000000000000000000000003515 106.0
SYD3_k127_843966_0 Domain of unknown function (DUF4070) - - - 2.009e-244 765.0
SYD3_k127_843966_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K00446 - 1.13.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 556.0
SYD3_k127_843966_10 Domain of unknown function (DUF1993) - - - 0.0000000000000000000000000000000000000000000000000000000000000002697 224.0
SYD3_k127_843966_11 ABC-type nitrate sulfonate bicarbonate transport system, permease component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000004002 229.0
SYD3_k127_843966_12 N-terminal half of MaoC dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000003409 207.0
SYD3_k127_843966_13 Class II aldolase K18613 GO:0003674,GO:0003824,GO:0005488,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009111,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0017144,GO:0030145,GO:0034641,GO:0042365,GO:0042737,GO:0042816,GO:0042820,GO:0043167,GO:0043169,GO:0044237,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0047431,GO:0071704,GO:0072524,GO:0072526,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 4.1.1.51 0.0000000000000000000000000000000000000000000000000000000232 207.0
SYD3_k127_843966_14 - - - - 0.00000000000000000000000000000000000000000000000000004964 192.0
SYD3_k127_843966_15 NMT1-like family K02051 - - 0.000000000000009034 86.0
SYD3_k127_843966_16 Flp Fap pilin component K02651 - - 0.000000000001598 69.0
SYD3_k127_843966_17 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K16090 - - 0.000001412 49.0
SYD3_k127_843966_2 ATPases associated with a variety of cellular activities K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 378.0
SYD3_k127_843966_3 PKHD-type hydroxylase K07336 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 372.0
SYD3_k127_843966_4 ABC transporter, phosphonate, periplasmic substrate-binding protein K02051,K15553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008903 335.0
SYD3_k127_843966_5 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008781 303.0
SYD3_k127_843966_6 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001831 282.0
SYD3_k127_843966_7 Protein of unknown function (DUF938) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001951 268.0
SYD3_k127_843966_8 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002774 260.0
SYD3_k127_843966_9 Domain of unknown function (DUF1932) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008042 248.0
SYD3_k127_8480254_0 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000589 330.0
SYD3_k127_8480254_1 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003934 306.0
SYD3_k127_8502378_0 - - - - 0.00000000000000000008906 91.0
SYD3_k127_8502378_1 Peptidoglycan-binding domain 1 protein K01447,K07126,K13582 - 3.5.1.28 0.00000000000001029 85.0
SYD3_k127_8531760_0 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000001636 161.0
SYD3_k127_8531760_1 xanthine dehydrogenase, a b hammerhead K03520,K19820 - 1.2.5.3,1.5.99.4 0.00000000000000000000000000000000001273 140.0
SYD3_k127_8707116_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.0 1281.0
SYD3_k127_8707116_1 ATP-dependent helicase K03579 - 3.6.4.13 0.0 1114.0
SYD3_k127_8707116_10 Domain related to MnhB subunit of Na+/H+ antiporter K05566 - - 0.000000000000000000000000000000000000000000000000009735 186.0
SYD3_k127_8707116_11 COG1006 Multisubunit Na H antiporter, MnhC subunit K05567 - - 0.000000000000000000000000000000000000000000000002312 177.0
SYD3_k127_8707116_12 gag-polyprotein putative aspartyl protease K06985 - - 0.000000000000000000000000000000000000000000000004369 177.0
SYD3_k127_8707116_13 Na+/H+ ion antiporter subunit - - - 0.0000000000000000000000000000000000000000004765 164.0
SYD3_k127_8707116_14 Multiple resistance and pH regulation protein F (MrpF / PhaF) K05570 - - 0.00000000000000000000000000000001792 128.0
SYD3_k127_8707116_15 Na+/H+ antiporter subunit K05571 - - 0.000000000000000000000000000001737 129.0
SYD3_k127_8707116_16 Endoribonuclease L-PSP - - - 0.0000000000000000000000119 107.0
SYD3_k127_8707116_17 - - - - 0.000000000000000000008504 94.0
SYD3_k127_8707116_18 Putative diguanylate phosphodiesterase - - - 0.00000000004746 66.0
SYD3_k127_8707116_2 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K15778 - 5.4.2.2,5.4.2.8 1.249e-275 854.0
SYD3_k127_8707116_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.1.1.22 2.277e-220 689.0
SYD3_k127_8707116_4 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter MnhD subunit K05568 - - 3.795e-220 696.0
SYD3_k127_8707116_5 Proton-conducting membrane transporter K00343,K05568 - 1.6.5.3 3.169e-197 625.0
SYD3_k127_8707116_6 Proton-conducting membrane transporter K00341,K05568 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 556.0
SYD3_k127_8707116_7 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 466.0
SYD3_k127_8707116_8 cation transmembrane transporter activity K07300 GO:0003674,GO:0005215,GO:0005451,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006814,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015079,GO:0015081,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015385,GO:0015386,GO:0015491,GO:0015672,GO:0016020,GO:0016021,GO:0022804,GO:0022821,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0035725,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:0099516,GO:1902600 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 449.0
SYD3_k127_8707116_9 Domain of unknown function (DUF4040) K05566 - - 0.00000000000000000000000000000000000000000000000000000006944 201.0
SYD3_k127_8724126_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006374 547.0
SYD3_k127_8724126_1 aerobic-type carbon monoxide dehydrogenase, small subunit CoxS K03518,K13483 - 1.2.5.3 0.000000000000000000000000001122 113.0
SYD3_k127_8733506_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 2.93e-271 843.0
SYD3_k127_8733506_1 Histidine kinase K14980 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.13.3 8.006e-262 819.0
SYD3_k127_8733506_2 Transcriptional regulatory protein, C terminal K14981 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 443.0
SYD3_k127_8733506_3 LTXXQ motif family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000932 322.0
SYD3_k127_8733506_4 Pyridoxamine 5'-phosphate oxidase K07226 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001401 280.0
SYD3_k127_8733506_5 PTS system fructose IIA component K02793 - 2.7.1.191 0.000000000000000000000000000000000000000000000000000000000000007509 220.0
SYD3_k127_8733506_6 HPr Serine kinase C-terminal domain K06023 - - 0.0000000000000000000000000000000000002834 150.0
SYD3_k127_8733506_7 system phosphocarrier protein HPr K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006808,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0044424,GO:0044464,GO:0050789,GO:0051179,GO:0051234,GO:0065007,GO:0071702 - 0.0000000000000000002524 93.0
SYD3_k127_8742159_0 Domain of unknown function (DUF3943) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005387 286.0
SYD3_k127_8742159_1 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.00000001116 60.0
SYD3_k127_875917_0 hydrolases or acyltransferases, alpha beta hydrolase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 370.0
SYD3_k127_875917_1 - - - - 0.0000000000000000000000000000000000000001043 154.0
SYD3_k127_875917_2 SPW repeat - - - 0.0000000000000006043 85.0
SYD3_k127_875917_3 - - - - 0.0008134 46.0
SYD3_k127_8844525_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032940,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 8.383e-283 881.0
SYD3_k127_8844525_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 5.97e-234 738.0
SYD3_k127_8844525_10 Protein of unknown function (DUF1036) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006362 364.0
SYD3_k127_8844525_11 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 349.0
SYD3_k127_8844525_12 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 306.0
SYD3_k127_8844525_13 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001533 289.0
SYD3_k127_8844525_14 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002816 272.0
SYD3_k127_8844525_15 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01450,K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.31,3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000002627 252.0
SYD3_k127_8844525_16 SNARE associated golgi protein - - - 0.00000000000000000000000000000000000000000000000000004449 196.0
SYD3_k127_8844525_17 HupE / UreJ protein K03192 - - 0.00000000000000000000000000000000000000000002449 168.0
SYD3_k127_8844525_18 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000000000006244 150.0
SYD3_k127_8844525_19 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000000000000000000000000007024 144.0
SYD3_k127_8844525_2 Acetyl-coenzyme A transporter 1 K08218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 585.0
SYD3_k127_8844525_20 Domain of unknown function (DUF1330) - - - 0.000000000000000000000000000000000003851 143.0
SYD3_k127_8844525_21 small membrane protein - - - 0.00000000000000000000000000000009792 128.0
SYD3_k127_8844525_22 Ribosomal protein L34 K02914 - - 0.000000000000002312 76.0
SYD3_k127_8844525_3 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 569.0
SYD3_k127_8844525_4 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 492.0
SYD3_k127_8844525_5 Tetrahydrodipicolinate N-succinyltransferase N-terminal K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009401 451.0
SYD3_k127_8844525_6 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 451.0
SYD3_k127_8844525_7 RmuC family K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008761 407.0
SYD3_k127_8844525_8 Haloacid dehalogenase-like hydrolase K07025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 369.0
SYD3_k127_8844525_9 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007441 363.0
SYD3_k127_8938713_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates - - - 6.762e-316 1003.0
SYD3_k127_8938713_1 AMP-binding enzyme K12508 - 6.2.1.34 5.596e-225 713.0
SYD3_k127_8938713_10 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003996 542.0
SYD3_k127_8938713_11 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 522.0
SYD3_k127_8938713_12 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 516.0
SYD3_k127_8938713_13 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005602 514.0
SYD3_k127_8938713_14 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008894 517.0
SYD3_k127_8938713_15 CoA-transferase family III K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005956 500.0
SYD3_k127_8938713_16 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 496.0
SYD3_k127_8938713_17 Methionine synthase K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005835 465.0
SYD3_k127_8938713_18 Pyruvate ferredoxin/flavodoxin oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 469.0
SYD3_k127_8938713_19 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 450.0
SYD3_k127_8938713_2 Sodium/hydrogen exchanger family K03316 - - 4.831e-219 691.0
SYD3_k127_8938713_20 Amidohydrolase K10220 - 4.2.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005414 454.0
SYD3_k127_8938713_21 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01039 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009589 439.0
SYD3_k127_8938713_22 Protocatechuate 3,4-dioxygenase beta subunit N terminal K00449 - 1.13.11.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008037 410.0
SYD3_k127_8938713_23 KR domain K00023 - 1.1.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 404.0
SYD3_k127_8938713_24 Acyl CoA acetate 3-ketoacid CoA transferase beta subunit K01040 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 406.0
SYD3_k127_8938713_25 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007061 398.0
SYD3_k127_8938713_26 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 392.0
SYD3_k127_8938713_27 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 376.0
SYD3_k127_8938713_28 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 357.0
SYD3_k127_8938713_29 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00019 - 1.1.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 357.0
SYD3_k127_8938713_3 Belongs to the thiolase family K00626 - 2.3.1.9 8.043e-217 676.0
SYD3_k127_8938713_30 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000931 349.0
SYD3_k127_8938713_31 Belongs to the FPP GGPP synthase family K00795 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009536,GO:0009842,GO:0009987,GO:0016114,GO:0016740,GO:0016765,GO:0019637,GO:0033385,GO:0033386,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0090407,GO:1901576 2.5.1.1,2.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 352.0
SYD3_k127_8938713_32 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 349.0
SYD3_k127_8938713_33 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004979 335.0
SYD3_k127_8938713_34 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 318.0
SYD3_k127_8938713_35 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001386 292.0
SYD3_k127_8938713_36 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001444 274.0
SYD3_k127_8938713_37 Dioxygenase K00448 - 1.13.11.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003497 269.0
SYD3_k127_8938713_38 Polyhydroxyalkanoate synthesis repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006012 267.0
SYD3_k127_8938713_39 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001731 254.0
SYD3_k127_8938713_4 Belongs to the thiolase family K07823 - 2.3.1.174 4.341e-212 664.0
SYD3_k127_8938713_40 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000002238 238.0
SYD3_k127_8938713_41 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 0.00000000000000000000000000000000000000000000000000000000000000003076 226.0
SYD3_k127_8938713_42 Belongs to the Fur family K09823 - - 0.0000000000000000000000000000000000000000000000000000000000002645 216.0
SYD3_k127_8938713_43 Cupin superfamily (DUF985) K09705 - - 0.000000000000000000000000000000000000000000000000000000000004108 210.0
SYD3_k127_8938713_44 Protein of unknown function (DUF1345) - - - 0.0000000000000000000000000000000000000000000000000000009073 199.0
SYD3_k127_8938713_45 Domain of unknown function (DUF4167) - - - 0.0000000000000000000000000000000000000000000000001911 186.0
SYD3_k127_8938713_46 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000001984 181.0
SYD3_k127_8938713_47 Protein of unknown function (DUF3237) - - - 0.0000000000000000000000000000000000000000000005016 173.0
SYD3_k127_8938713_48 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000004588 162.0
SYD3_k127_8938713_49 - - - - 0.0000000000000000000000000000000000000000006132 161.0
SYD3_k127_8938713_5 Tripartite ATP-independent periplasmic transporter, DctM component - - - 2.272e-206 649.0
SYD3_k127_8938713_50 Thioesterase superfamily K01075 - 3.1.2.23 0.000000000000000000000000000000000001481 142.0
SYD3_k127_8938713_51 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000008835 133.0
SYD3_k127_8938713_52 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000000000000005881 118.0
SYD3_k127_8938713_54 Methyltransferase domain - - - 0.0003617 44.0
SYD3_k127_8938713_55 trans-aconitate 2-methyltransferase activity K02169 - 2.1.1.197 0.00073 44.0
SYD3_k127_8938713_6 ribosomal rna small subunit methyltransferase - - - 4.324e-206 652.0
SYD3_k127_8938713_7 acyl-CoA dehydrogenase K00249 - 1.3.8.7 7.213e-204 639.0
SYD3_k127_8938713_8 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 562.0
SYD3_k127_8938713_9 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004216 553.0
SYD3_k127_8971846_0 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 2.78e-246 767.0
SYD3_k127_8971846_1 COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type alpha subunit K00161,K21416 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 561.0
SYD3_k127_8971846_10 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00162,K00627 - 1.2.4.1,2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005619 411.0
SYD3_k127_8971846_11 D-isomer specific 2-hydroxyacid dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008154 401.0
SYD3_k127_8971846_12 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007899 369.0
SYD3_k127_8971846_13 NAD dependent epimerase/dehydratase family K21883 - 1.1.1.401 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009543 362.0
SYD3_k127_8971846_14 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006348 361.0
SYD3_k127_8971846_15 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004731 354.0
SYD3_k127_8971846_16 Phosphoenolpyruvate phosphomutase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009326 350.0
SYD3_k127_8971846_17 ABC-type nitrate sulfonate bicarbonate transport system ATPase component K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008729 318.0
SYD3_k127_8971846_18 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 299.0
SYD3_k127_8971846_19 Chromate resistance exported protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004162 281.0
SYD3_k127_8971846_2 Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006123 542.0
SYD3_k127_8971846_20 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009449 279.0
SYD3_k127_8971846_21 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004252 252.0
SYD3_k127_8971846_22 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004681 252.0
SYD3_k127_8971846_23 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000000000004027 202.0
SYD3_k127_8971846_24 - - - - 0.0000000000000000000000000000000000000000000000000003676 200.0
SYD3_k127_8971846_25 Domain of unknown function (DUF4337) - - - 0.00000000000000000000000000000000000000000000000009166 184.0
SYD3_k127_8971846_26 Protease inhibitor Inh - - - 0.000000000000000000000000000000000000000000000001154 182.0
SYD3_k127_8971846_27 - - - - 0.00000006961 61.0
SYD3_k127_8971846_3 Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit K00162,K21417 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 540.0
SYD3_k127_8971846_4 NMT1/THI5 like K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003744 509.0
SYD3_k127_8971846_5 Metallopeptidase family M24 K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 472.0
SYD3_k127_8971846_6 COG0451 Nucleoside-diphosphate-sugar epimerases K22025 - 1.1.1.410 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002136 472.0
SYD3_k127_8971846_7 Bacterial extracellular solute-binding protein, family 7 K21395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004438 467.0
SYD3_k127_8971846_8 Chromate transporter K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 452.0
SYD3_k127_8971846_9 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 439.0
SYD3_k127_8979068_0 Transposase domain (DUF772) K07487 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 437.0
SYD3_k127_9056683_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1627.0
SYD3_k127_9056683_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1152.0
SYD3_k127_9056683_10 FAD binding domain K00480 - 1.14.13.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 413.0
SYD3_k127_9056683_11 Patatin-like phospholipase K07001 GO:0003674,GO:0003824,GO:0016787 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004119 411.0
SYD3_k127_9056683_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 403.0
SYD3_k127_9056683_13 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 404.0
SYD3_k127_9056683_14 C-C_Bond_Lyase of the TIM-Barrel fold K01644 - 4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008748 379.0
SYD3_k127_9056683_15 3' exoribonuclease, RNase T-like K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006999 377.0
SYD3_k127_9056683_16 Alpha beta hydrolase K00433 - 1.11.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 347.0
SYD3_k127_9056683_17 GTP cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 322.0
SYD3_k127_9056683_18 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 322.0
SYD3_k127_9056683_19 LamB/YcsF family K07160 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 307.0
SYD3_k127_9056683_2 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1144.0
SYD3_k127_9056683_20 PFAM type IV pilus assembly PilZ - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 303.0
SYD3_k127_9056683_21 periplasmic protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 311.0
SYD3_k127_9056683_22 membrane protein (homolog of Drosophila rhomboid) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003449 300.0
SYD3_k127_9056683_23 PFAM transglutaminase family protein cysteine peptidase, BTLCP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004446 287.0
SYD3_k127_9056683_24 MaoC like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001044 273.0
SYD3_k127_9056683_25 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001592 261.0
SYD3_k127_9056683_26 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004062 252.0
SYD3_k127_9056683_27 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000163 261.0
SYD3_k127_9056683_28 NifU-like N terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005894 243.0
SYD3_k127_9056683_29 transglycosylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001789 244.0
SYD3_k127_9056683_3 Glycosyl hydrolases family 15 - - - 2.038e-271 846.0
SYD3_k127_9056683_30 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000000000000000006854 214.0
SYD3_k127_9056683_31 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.000000000000000000000000000000000000000000000000000000000001819 218.0
SYD3_k127_9056683_32 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000004057 200.0
SYD3_k127_9056683_33 YtkA-like - - - 0.000000000000000000000000000000000000000000000000000007272 193.0
SYD3_k127_9056683_34 Copper binding proteins, plastocyanin/azurin family - - - 0.00000000000000000000000000000000000000000000000000002553 192.0
SYD3_k127_9056683_35 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000000000000000000232 189.0
SYD3_k127_9056683_36 - - - - 0.0000000000000000000000000000000000000000000000000003798 194.0
SYD3_k127_9056683_37 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000001034 177.0
SYD3_k127_9056683_38 Domain of unknown function (DUF305) - - - 0.000000000000000000000000000000000000000000008903 168.0
SYD3_k127_9056683_39 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000005414 166.0
SYD3_k127_9056683_4 Multicopper oxidase K22348 - 1.16.3.3 7.586e-257 797.0
SYD3_k127_9056683_40 Histidine Phosphotransfer domain - - - 0.00000000000000000000000000000000000000000006957 171.0
SYD3_k127_9056683_41 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000000000000000000123 158.0
SYD3_k127_9056683_42 Metal-sensitive transcriptional repressor K21600 - - 0.00000000000000000000000000000000000000002705 154.0
SYD3_k127_9056683_43 PAS domain - - - 0.000000000000000000000000000000000000001303 158.0
SYD3_k127_9056683_44 - - - - 0.00000000000000000000000000000000000001314 148.0
SYD3_k127_9056683_45 Zinc-finger domain - - - 0.00000000000000000000000000000000002344 141.0
SYD3_k127_9056683_46 - - - - 0.00000000000000000000000000000006505 131.0
SYD3_k127_9056683_47 Copper binding periplasmic protein CusF - - - 0.00000000000000000000000000004244 119.0
SYD3_k127_9056683_48 - - - - 0.0000000000000000000000000103 113.0
SYD3_k127_9056683_49 Cytochrome c - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.00000000000000000000000003259 111.0
SYD3_k127_9056683_5 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697 - 2.4.1.15,2.4.1.347 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 564.0
SYD3_k127_9056683_50 - - - - 0.00000000000000002687 83.0
SYD3_k127_9056683_51 Protein of unknown function (DUF3126) - - - 0.000000000000001461 82.0
SYD3_k127_9056683_52 Protein of unknown function (DUF3126) - - - 0.00000000000003332 78.0
SYD3_k127_9056683_53 - - - - 0.000000000159 70.0
SYD3_k127_9056683_54 - - - - 0.00000005669 59.0
SYD3_k127_9056683_56 Uncharacterized protein conserved in bacteria (DUF2059) K09924 - - 0.0005851 52.0
SYD3_k127_9056683_6 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 542.0
SYD3_k127_9056683_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003117 536.0
SYD3_k127_9056683_8 Cobalamin-independent synthase, Catalytic domain K00549,K22363 - 2.1.1.14,4.4.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007269 507.0
SYD3_k127_9056683_9 Serine acetyltransferase, N-terminal K00640 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009001,GO:0009058,GO:0009069,GO:0009070,GO:0009314,GO:0009333,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016053,GO:0016407,GO:0016412,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019344,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050896,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005615 450.0
SYD3_k127_9112727_0 DDE superfamily endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 518.0
SYD3_k127_9112727_1 Involved in chromosome partitioning - - - 0.0000000000000001617 80.0
SYD3_k127_9151582_0 Tripartite tricarboxylate transporter TctA family K07793 - - 3.077e-252 785.0
SYD3_k127_9151582_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 GO:0003674,GO:0003824,GO:0004333,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 1.142e-221 696.0
SYD3_k127_9151582_10 Tripartite tricarboxylate transporter TctB family K07794 - - 0.00000000000000000000000000000000000000000000009363 173.0
SYD3_k127_9151582_11 - - - - 0.00000000000000000000000000000000000004365 150.0
SYD3_k127_9151582_12 Uncharacterized protein conserved in bacteria (DUF2065) - - - 0.00000000000000000005934 90.0
SYD3_k127_9151582_13 Ribbon-helix-helix domain - - - 0.000000000002438 66.0
SYD3_k127_9151582_15 Domain of unknown function (DUF4169) - - - 0.000002343 51.0
SYD3_k127_9151582_16 - - - - 0.00002314 47.0
SYD3_k127_9151582_2 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002701 571.0
SYD3_k127_9151582_3 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 468.0
SYD3_k127_9151582_4 HflC and HflK could regulate a protease K04087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000413 436.0
SYD3_k127_9151582_5 Chromate transporter K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000386 227.0
SYD3_k127_9151582_6 Inner membrane component domain - - - 0.00000000000000000000000000000000000000000000000000000001816 200.0
SYD3_k127_9151582_7 Stringent starvation protein B K09985 - - 0.00000000000000000000000000000000000000000000000000000006938 203.0
SYD3_k127_9151582_8 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000000000000009917 199.0
SYD3_k127_9151582_9 Chromate transporter K07240 - - 0.0000000000000000000000000000000000000000000000000000001147 200.0
SYD3_k127_9240896_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 3.13e-277 859.0
SYD3_k127_9240896_1 tRNA synthetases class I (C) catalytic domain K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008711 319.0
SYD3_k127_9240896_2 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000001512 254.0
SYD3_k127_9240896_3 Acetyltransferase (GNAT) domain K03830 - - 0.000000000000000000000000000000000000000000000000000000000000002122 224.0
SYD3_k127_9240896_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000003301 170.0
SYD3_k127_9240896_5 - - - - 0.0000001914 53.0
SYD3_k127_937219_0 PFAM NAD-glutamate dehydrogenase K15371 GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0008150,GO:0008152,GO:0016491,GO:0016638,GO:0016639,GO:0055114 1.4.1.2 0.0 1769.0
SYD3_k127_937219_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 7.702e-222 701.0
SYD3_k127_937219_10 - - - - 0.000001307 54.0
SYD3_k127_937219_2 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family K03185 GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016491,GO:0019168,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901576,GO:1901661,GO:1901663 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 551.0
SYD3_k127_937219_3 Tetratricopeptide repeat K03671,K05838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 460.0
SYD3_k127_937219_4 ATP-dependent protease La (LON) substrate-binding domain K01338,K07157 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 376.0
SYD3_k127_937219_5 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003742 291.0
SYD3_k127_937219_6 Glutathione S-transferase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003398 267.0
SYD3_k127_937219_7 YbaK prolyl-tRNA synthetase K19055 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001079 243.0
SYD3_k127_937219_8 Asp/Glu/Hydantoin racemase K01779 - 5.1.1.13 0.0000000000000000000000000000000000000000003711 168.0
SYD3_k127_937219_9 Belongs to the UPF0434 family K09791 - - 0.00000000000000000000000001311 112.0
SYD3_k127_9375014_0 GTA TIM-barrel-like domain - - - 0.0 1720.0
SYD3_k127_9375014_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 GO:0000820,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006521,GO:0008150,GO:0008882,GO:0010565,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0031323,GO:0033238,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0062012,GO:0065007,GO:0070566,GO:0080090 2.7.7.42,2.7.7.89 0.0 1106.0
SYD3_k127_9375014_10 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 617.0
SYD3_k127_9375014_11 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004577 553.0
SYD3_k127_9375014_12 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 541.0
SYD3_k127_9375014_13 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 478.0
SYD3_k127_9375014_14 NADP oxidoreductase coenzyme F420-dependent K00020,K00042 - 1.1.1.31,1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000443 475.0
SYD3_k127_9375014_15 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008555 467.0
SYD3_k127_9375014_16 Dimerisation domain of Zinc Transporter K13283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000352 448.0
SYD3_k127_9375014_17 Two component transcriptional regulator, winged helix family K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 426.0
SYD3_k127_9375014_18 Phage conserved hypothetical protein BR0599 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 398.0
SYD3_k127_9375014_19 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004379 380.0
SYD3_k127_9375014_2 Domain of unknown function (DUF3458_C) ARM repeats K01256 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008270,GO:0016020,GO:0016787,GO:0019538,GO:0033218,GO:0042277,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564 3.4.11.2 0.0 1093.0
SYD3_k127_9375014_20 Cytochrome c-type biogenesis protein K02200 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009717 363.0
SYD3_k127_9375014_21 Conserved hypothetical protein 2217 (DUF2460) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 334.0
SYD3_k127_9375014_22 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 GO:0000160,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0006355,GO:0007154,GO:0007165,GO:0008150,GO:0009889,GO:0009893,GO:0009987,GO:0010035,GO:0010038,GO:0010468,GO:0010556,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0023052,GO:0031323,GO:0031326,GO:0035556,GO:0042221,GO:0042802,GO:0046688,GO:0048518,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003744 312.0
SYD3_k127_9375014_23 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000895 316.0
SYD3_k127_9375014_24 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 311.0
SYD3_k127_9375014_25 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007559 291.0
SYD3_k127_9375014_26 nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001245 252.0
SYD3_k127_9375014_27 Protein of unknown function (DUF2793) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003664 249.0
SYD3_k127_9375014_28 Aspartyl protease K06985 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007927 243.0
SYD3_k127_9375014_29 surface antigen - - - 0.000000000000000000000000000000000000000000000000000000000000000001794 231.0
SYD3_k127_9375014_3 Cytochrome c-type biogenesis protein K02198 - - 1.085e-308 958.0
SYD3_k127_9375014_30 - - - - 0.000000000000000000000000000000000000000000000000000000000000000004067 238.0
SYD3_k127_9375014_31 Glycosyl hydrolase 108 - - - 0.000000000000000000000000000000000000000000000000000000000000001422 222.0
SYD3_k127_9375014_32 NlpC/P60 family - - - 0.000000000000000000000000000000000000000000000000000000000000007231 219.0
SYD3_k127_9375014_33 Protein of unknown function (DUF3168) - - - 0.00000000000000000000000000000000000000000000000000000000000003286 216.0
SYD3_k127_9375014_34 Phage tail tube protein - - - 0.00000000000000000000000000000000000000000000000000000000001049 209.0
SYD3_k127_9375014_35 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 GO:0003674,GO:0003824,GO:0008150,GO:0009987,GO:0016043,GO:0017004,GO:0022607,GO:0034622,GO:0043933,GO:0044085,GO:0065003,GO:0071840 - 0.0000000000000000000000000000000000000000000000000000000003759 205.0
SYD3_k127_9375014_36 COG5281, Phage-related minor tail protein - - - 0.00000000000000000000000000000000000000000000000000000004474 202.0
SYD3_k127_9375014_37 Phage gp6-like head-tail connector protein - - - 0.000000000000000000000000000000000000000000000000000003496 201.0
SYD3_k127_9375014_38 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000002824 193.0
SYD3_k127_9375014_39 subunit of a heme lyase K02200 - - 0.0000000000000000000000000000000000000000000000004757 179.0
SYD3_k127_9375014_4 His Kinase A (phosphoacceptor) domain K07716 - 2.7.13.3 2.31e-296 927.0
SYD3_k127_9375014_40 TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.00000000000000000000000000000000000000000000001373 171.0
SYD3_k127_9375014_41 Phage tail tube protein, GTA-gp10 - - - 0.0000000000000000000000000000000000000000009854 158.0
SYD3_k127_9375014_42 - - - - 0.0000000000000000000000000000000000009591 144.0
SYD3_k127_9375014_43 oxidoreductase activity - - - 0.0000000000000000000000000000000006296 147.0
SYD3_k127_9375014_44 Phage head-tail joining protein - - - 0.000000000000000000000002044 109.0
SYD3_k127_9375014_45 Phage tail assembly chaperone protein, TAC - - - 0.0000000000000000037 90.0
SYD3_k127_9375014_46 Protein of unknown function (DUF1289) K06938 - - 0.0000000000005246 72.0
SYD3_k127_9375014_48 - - - - 0.0000003208 58.0
SYD3_k127_9375014_5 COG2873 O-acetylhomoserine sulfhydrylase K01740 - 2.5.1.49 3.986e-228 714.0
SYD3_k127_9375014_6 His Kinase A (phosphoacceptor) domain K07716 - 2.7.13.3 4.103e-226 711.0
SYD3_k127_9375014_7 Histidine kinase - - - 1.622e-201 636.0
SYD3_k127_9375014_8 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 2.061e-196 616.0
SYD3_k127_9375014_9 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 9.015e-195 617.0
SYD3_k127_9414931_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005318 598.0
SYD3_k127_9543030_0 Glutamate synthase central domain K00265 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14 0.0 2559.0
SYD3_k127_9543030_1 Pyruvate ferredoxin/flavodoxin oxidoreductase K04090 - 1.2.7.8 0.0 1677.0
SYD3_k127_9543030_10 Alanine dehydrogenase/PNT, C-terminal domain K00324 GO:0000166,GO:0003674,GO:0003824,GO:0003957,GO:0005215,GO:0005488,GO:0005515,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006740,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0008746,GO:0008750,GO:0009117,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0016491,GO:0016651,GO:0016652,GO:0019362,GO:0019637,GO:0022857,GO:0022890,GO:0034220,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046496,GO:0046983,GO:0048037,GO:0050662,GO:0051179,GO:0051186,GO:0051234,GO:0051287,GO:0055085,GO:0055086,GO:0055114,GO:0070403,GO:0070404,GO:0071704,GO:0072524,GO:0097159,GO:0098655,GO:0098660,GO:0098662,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1902600 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008282 580.0
SYD3_k127_9543030_11 Putative peptidoglycan binding domain K00786,K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 583.0
SYD3_k127_9543030_12 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 579.0
SYD3_k127_9543030_13 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003524 588.0
SYD3_k127_9543030_14 AMP-binding enzyme K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008272 547.0
SYD3_k127_9543030_15 MOFRL family K11529 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 544.0
SYD3_k127_9543030_16 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008704 505.0
SYD3_k127_9543030_17 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 511.0
SYD3_k127_9543030_18 Ring hydroxylating alpha subunit (catalytic domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006105 502.0
SYD3_k127_9543030_19 Methionine synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 496.0
SYD3_k127_9543030_2 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) K01897 - 6.2.1.3 0.0 1044.0
SYD3_k127_9543030_20 N-formylglutamate amidohydrolase K01458 - 3.5.1.68 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 471.0
SYD3_k127_9543030_21 Ferrochelatase K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 474.0
SYD3_k127_9543030_22 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 468.0
SYD3_k127_9543030_23 - K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 474.0
SYD3_k127_9543030_24 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005522 457.0
SYD3_k127_9543030_25 Nucleotidyl transferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 455.0
SYD3_k127_9543030_26 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 451.0
SYD3_k127_9543030_27 Serine aminopeptidase, S33 K01048 - 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003185 443.0
SYD3_k127_9543030_28 HWE histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005511 439.0
SYD3_k127_9543030_29 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 430.0
SYD3_k127_9543030_3 Oligopeptidase F K08602 - - 4.673e-305 944.0
SYD3_k127_9543030_30 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003045 424.0
SYD3_k127_9543030_31 Bacterial protein of unknown function (DUF882) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 404.0
SYD3_k127_9543030_32 Inositol monophosphatase family K01092,K18649 - 3.1.3.15,3.1.3.25,3.1.3.93 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 379.0
SYD3_k127_9543030_33 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 372.0
SYD3_k127_9543030_34 Protein of unknown function (DUF459) K09795 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008058 383.0
SYD3_k127_9543030_35 Predicted integral membrane protein (DUF2189) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006297 338.0
SYD3_k127_9543030_36 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 336.0
SYD3_k127_9543030_37 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 331.0
SYD3_k127_9543030_38 COG1073 Hydrolases of the alpha beta superfamily K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000592 303.0
SYD3_k127_9543030_39 HpcH/HpaI aldolase/citrate lyase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008261 302.0
SYD3_k127_9543030_4 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 GO:0008150,GO:0008152,GO:0055114 1.6.1.2 3.896e-254 788.0
SYD3_k127_9543030_40 Glutathione S-transferase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002355 275.0
SYD3_k127_9543030_41 Class II Aldolase and Adducin N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005768 263.0
SYD3_k127_9543030_42 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003705 254.0
SYD3_k127_9543030_43 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000001864 256.0
SYD3_k127_9543030_44 Protein of unknown function (DUF1036) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007447 244.0
SYD3_k127_9543030_45 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000003041 237.0
SYD3_k127_9543030_46 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000006243 230.0
SYD3_k127_9543030_47 Response regulator receiver K13589 - - 0.0000000000000000000000000000000000000000000000000000000000004006 212.0
SYD3_k127_9543030_48 Belongs to the small heat shock protein (HSP20) family K04080 - - 0.000000000000000000000000000000000000000000000000000000000002285 222.0
SYD3_k127_9543030_49 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000004633 202.0
SYD3_k127_9543030_5 NADH NADPH, small subunit K00266 - 1.4.1.13,1.4.1.14 9.989e-253 785.0
SYD3_k127_9543030_50 Ring hydroxylating beta subunit K16303 - 1.14.12.25 0.0000000000000000000000000000000000000000000000000001944 201.0
SYD3_k127_9543030_51 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000001943 183.0
SYD3_k127_9543030_52 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 GO:0008150,GO:0008152,GO:0055114 1.6.1.2 0.0000000000000000000000000000000000000000000000002215 186.0
SYD3_k127_9543030_53 Protein of unknown function (DUF1244) K09948 - - 0.00000000000000000000000000000000000000002497 160.0
SYD3_k127_9543030_54 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000001486 146.0
SYD3_k127_9543030_55 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.000000000000000000000000000000002698 142.0
SYD3_k127_9543030_56 Belongs to the UPF0335 family - - - 0.00000000000000000000000000000008356 127.0
SYD3_k127_9543030_57 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0015035,GO:0015036,GO:0016491,GO:0016667,GO:0033218,GO:0042277,GO:0043167,GO:0043168,GO:0043295,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0055114,GO:0072341,GO:1900750,GO:1901681 - 0.000000000000000000000000005074 117.0
SYD3_k127_9543030_58 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000001062 100.0
SYD3_k127_9543030_59 Protein of unknown function (DUF465) - - - 0.00000000000000000009281 95.0
SYD3_k127_9543030_6 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 6.804e-221 694.0
SYD3_k127_9543030_60 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000000004894 75.0
SYD3_k127_9543030_61 Protein of unknown function (DUF465) - - - 0.0000000000001278 78.0
SYD3_k127_9543030_62 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.00000000004846 66.0
SYD3_k127_9543030_63 Bacterial aa3 type cytochrome c oxidase subunit IV - - - 0.0000000036 62.0
SYD3_k127_9543030_64 Phage integrase family - - - 0.00002278 48.0
SYD3_k127_9543030_7 ABC1 family - - - 1.286e-217 682.0
SYD3_k127_9543030_8 Sigma-54 interaction domain K10912 GO:0003674,GO:0003700,GO:0004857,GO:0006355,GO:0008073,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010967,GO:0019219,GO:0019222,GO:0030234,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0033238,GO:0042979,GO:0043086,GO:0044092,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0065009,GO:0080090,GO:0098772,GO:0140110,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 1.042e-215 680.0
SYD3_k127_9543030_9 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 7.478e-209 657.0
SYD3_k127_9559025_0 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000001759 236.0
SYD3_k127_9559025_1 Belongs to the UPF0255 family - - - 0.000000005262 59.0
SYD3_k127_9583706_0 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07497 - - 8.93e-213 665.0
SYD3_k127_9593635_0 Flavoprotein involved in K transport - - - 1.348e-236 743.0
SYD3_k127_9593635_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000002058 250.0
SYD3_k127_9638963_0 Aerotolerance regulator N-terminal - - - 0.0 1238.0
SYD3_k127_9638963_1 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1072.0
SYD3_k127_9638963_10 Isocitrate/isopropylmalate dehydrogenase K00052 GO:0006082,GO:0006575,GO:0006732,GO:0006793,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016053,GO:0019297,GO:0019298,GO:0019752,GO:0032787,GO:0042398,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 579.0
SYD3_k127_9638963_11 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 572.0
SYD3_k127_9638963_12 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004346 572.0
SYD3_k127_9638963_13 ATPase family associated with various cellular activities (AAA) K03924 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006626 551.0
SYD3_k127_9638963_14 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007875 532.0
SYD3_k127_9638963_15 Transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 529.0
SYD3_k127_9638963_16 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003531 510.0
SYD3_k127_9638963_17 NADH flavin oxidoreductase NADH oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 510.0
SYD3_k127_9638963_18 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004771 523.0
SYD3_k127_9638963_19 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 488.0
SYD3_k127_9638963_2 membrane - - - 0.0 1023.0
SYD3_k127_9638963_20 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 487.0
SYD3_k127_9638963_21 Male sterility protein K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006691 481.0
SYD3_k127_9638963_22 Glutathione S-transferase, C-terminal domain K07393 GO:0003674,GO:0003824,GO:0004364,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0016491,GO:0016667,GO:0016672,GO:0016740,GO:0016765,GO:0042221,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.8.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005686 468.0
SYD3_k127_9638963_23 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 467.0
SYD3_k127_9638963_24 Probable RNA and SrmB- binding site of polymerase A K00970,K00974 - 2.7.7.19,2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008311 470.0
SYD3_k127_9638963_25 Transcriptional regulatory protein, C terminal K02483,K13584 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006142 451.0
SYD3_k127_9638963_26 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 444.0
SYD3_k127_9638963_27 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 433.0
SYD3_k127_9638963_28 Pfam Transposase IS66 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 411.0
SYD3_k127_9638963_29 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 392.0
SYD3_k127_9638963_3 Histidine kinase K03407 - 2.7.13.3 2.058e-311 978.0
SYD3_k127_9638963_30 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00410,K00412 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 398.0
SYD3_k127_9638963_31 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000832 374.0
SYD3_k127_9638963_32 Histidine-specific methyltransferase, SAM-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 369.0
SYD3_k127_9638963_33 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 352.0
SYD3_k127_9638963_34 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007947 336.0
SYD3_k127_9638963_35 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 329.0
SYD3_k127_9638963_36 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007434 328.0
SYD3_k127_9638963_37 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007885 319.0
SYD3_k127_9638963_38 Belongs to the hyi family K01816,K22131 - 5.3.1.22,5.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003645 321.0
SYD3_k127_9638963_39 phosphatidylethanolamine N-methyltransferase K00570 - 2.1.1.17,2.1.1.71 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009576 313.0
SYD3_k127_9638963_4 Sigma-54 interaction domain K10943 - - 1.383e-234 731.0
SYD3_k127_9638963_40 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003951 331.0
SYD3_k127_9638963_41 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 306.0
SYD3_k127_9638963_42 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 296.0
SYD3_k127_9638963_43 Protein of unknown function (DUF1134) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 296.0
SYD3_k127_9638963_44 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006824 296.0
SYD3_k127_9638963_45 Histidine phosphotransferase C-terminal domain K13588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001515 278.0
SYD3_k127_9638963_46 NUDIX domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002746 280.0
SYD3_k127_9638963_47 Protein of unknown function (DUF1285) K09986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001438 276.0
SYD3_k127_9638963_48 Alpha/beta hydrolase family K01055 - 3.1.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001351 279.0
SYD3_k127_9638963_49 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001133 270.0
SYD3_k127_9638963_5 The M ring may be actively involved in energy transduction K02409 - - 6.184e-229 721.0
SYD3_k127_9638963_50 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000002022 268.0
SYD3_k127_9638963_51 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006716 262.0
SYD3_k127_9638963_52 Inositol monophosphatase family K01082 - 3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000008688 255.0
SYD3_k127_9638963_53 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001621 257.0
SYD3_k127_9638963_54 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004177 249.0
SYD3_k127_9638963_55 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.000000000000000000000000000000000000000000000000000000000000000000001587 244.0
SYD3_k127_9638963_56 Response regulator receiver domain K03413 - - 0.0000000000000000000000000000000000000000000000000000000000000000009677 229.0
SYD3_k127_9638963_57 Flavodoxin-like fold K19784 - - 0.00000000000000000000000000000000000000000000000000000000000000002349 228.0
SYD3_k127_9638963_58 Electron transfer DM13 - - - 0.0000000000000000000000000000000000000000000000000000000000000002075 227.0
SYD3_k127_9638963_59 TRAP transporter, solute receptor (TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000283 228.0
SYD3_k127_9638963_6 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00410,K00412 - - 4.458e-226 704.0
SYD3_k127_9638963_60 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000000000000000000105 219.0
SYD3_k127_9638963_61 Nudix hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000004339 212.0
SYD3_k127_9638963_62 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000008894 214.0
SYD3_k127_9638963_63 chemotaxis protein K03408 - - 0.000000000000000000000000000000000000000000000000000000005326 203.0
SYD3_k127_9638963_64 Protein of unknown function (DUF962) - - - 0.000000000000000000000000000000000000000000000000000000006845 203.0
SYD3_k127_9638963_65 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000006841 198.0
SYD3_k127_9638963_66 - - - - 0.000000000000000000000000000000000000000000000000000002289 196.0
SYD3_k127_9638963_67 Flagellar FliJ protein - - - 0.000000000000000000000000000000000000000000000000000004607 192.0
SYD3_k127_9638963_68 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000002424 186.0
SYD3_k127_9638963_69 Protein of unknown function (DUF1153) - - - 0.00000000000000000000000000000000000000000000000002462 179.0
SYD3_k127_9638963_7 ATP synthase alpha/beta family, nucleotide-binding domain K02412 - 3.6.3.14 1.058e-225 706.0
SYD3_k127_9638963_70 YHS domain protein - - - 0.0000000000000000000000000000000000000000000000005877 179.0
SYD3_k127_9638963_71 Flagellar biosynthesis type III secretory pathway protein K02411 - - 0.000000000000000000000000000000000000000000000001012 183.0
SYD3_k127_9638963_72 Protein of unknown function (DUF971) - - - 0.000000000000000000000000000000000000000000000009969 179.0
SYD3_k127_9638963_73 Cupin domain - - - 0.00000000000000000000000000000000000000000000003903 174.0
SYD3_k127_9638963_74 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 GO:0005575,GO:0005623,GO:0005886,GO:0009288,GO:0009425,GO:0016020,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000001224 171.0
SYD3_k127_9638963_75 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000000000184 172.0
SYD3_k127_9638963_76 - - - - 0.0000000000000000000000000000000000000000001087 176.0
SYD3_k127_9638963_77 Protein of unknown function (DUF952) - - - 0.00000000000000000000000000000000000000000039 160.0
SYD3_k127_9638963_78 Anti-sigma-K factor rskA - - - 0.000000000000000000000000000000000000002638 156.0
SYD3_k127_9638963_79 Flagellar hook-length control protein FliK K10565 - - 0.0000000000000000000000000000000000007354 158.0
SYD3_k127_9638963_8 Binding-protein-dependent transport system inner membrane component K02011 - - 1.151e-197 629.0
SYD3_k127_9638963_80 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000003765 116.0
SYD3_k127_9638963_81 - - - - 0.00000000000000000000000001877 117.0
SYD3_k127_9638963_82 DoxX K15977 - - 0.00000000000000004489 87.0
SYD3_k127_9638963_83 - - - - 0.0000000000000004023 87.0
SYD3_k127_9638963_84 - - - - 0.000000000002743 72.0
SYD3_k127_9638963_85 - - - - 0.00000000127 64.0
SYD3_k127_9638963_86 - - - - 0.000003812 51.0
SYD3_k127_9638963_87 LysR substrate binding domain - - - 0.0008481 45.0
SYD3_k127_9638963_9 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000595 595.0
SYD3_k127_9643307_0 Peptidase family M23 - - - 4.812e-274 858.0
SYD3_k127_9643307_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003504 361.0
SYD3_k127_9673392_0 Hopanoid biosynthesis associated radical SAM protein HpnJ - - - 3.62e-254 794.0
SYD3_k127_9673392_1 Belongs to the flagella basal body rod proteins family K02396 - - 5.168e-197 632.0
SYD3_k127_9673392_10 Nucleotidyl transferase K15669 - 2.7.7.71 0.000000000000000000006326 100.0
SYD3_k127_9673392_11 - - - - 0.000000001956 70.0
SYD3_k127_9673392_2 flagellar basal body K02390 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 488.0
SYD3_k127_9673392_3 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 430.0
SYD3_k127_9673392_4 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005915 417.0
SYD3_k127_9673392_5 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 311.0
SYD3_k127_9673392_6 PFAM flagellin domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001103 263.0
SYD3_k127_9673392_7 PFAM flagellin domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001013 251.0
SYD3_k127_9673392_8 Flagellar biosynthesis repressor FlbT K06601 - - 0.000000000000000000000000000000000000000000000000000005305 194.0
SYD3_k127_9673392_9 PFAM flagellar FlaF family protein K06602 - - 0.000000000000000000000000000000000000000000189 161.0
SYD3_k127_9699981_0 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 0.0 1211.0
SYD3_k127_9699981_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 5.452e-231 729.0
SYD3_k127_9699981_10 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.0000000000000000000000000000000001432 135.0
SYD3_k127_9699981_11 Belongs to the bacterial histone-like protein family K03530 - - 0.000000000000000000000000000000006376 130.0
SYD3_k127_9699981_12 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000000000000002161 117.0
SYD3_k127_9699981_13 - - - - 0.00000000000000000000000001561 112.0
SYD3_k127_9699981_14 BA14K-like protein - - - 0.00000000000000000002544 96.0
SYD3_k127_9699981_2 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 5.327e-203 640.0
SYD3_k127_9699981_3 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006235 514.0
SYD3_k127_9699981_4 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 447.0
SYD3_k127_9699981_5 Acyl-CoA dehydrogenase, middle domain K00252 - 1.3.8.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 417.0
SYD3_k127_9699981_6 Belongs to the DapA family K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 383.0
SYD3_k127_9699981_7 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 361.0
SYD3_k127_9699981_8 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 291.0
SYD3_k127_9699981_9 Domain of unknown function (DUF427) - - - 0.00000000000000000000000000000000000000000000000005001 182.0
SYD3_k127_9701224_0 Beta-Casp domain K07576 - - 1.4e-274 856.0
SYD3_k127_9701224_1 phosphorylase activity K00756,K00758 GO:0003674,GO:0003824,GO:0004645,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009032,GO:0016740,GO:0016757,GO:0016758,GO:0016763,GO:0044424,GO:0044444,GO:0044464 2.4.2.2,2.4.2.4 2.673e-261 812.0
SYD3_k127_9701224_2 N-terminal domain of ribose phosphate pyrophosphokinase K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 375.0
SYD3_k127_9701224_3 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 GO:0006355,GO:0006464,GO:0006807,GO:0006808,GO:0007154,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0018175,GO:0018177,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070887,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0080090,GO:0090293,GO:1901564,GO:1901698,GO:1901699,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 2.7.7.59 0.000000000001866 68.0
SYD3_k127_9701224_4 Penicillin-binding Protein K05366 - 2.4.1.129,3.4.16.4 0.0004438 47.0
SYD3_k127_9727673_0 COG3328 Transposase and inactivated derivatives - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008781 480.0
SYD3_k127_9780254_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1241.0
SYD3_k127_9780254_1 Amidohydrolase family K01466 - 3.5.2.5 3.42e-232 727.0
SYD3_k127_9780254_10 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003034 400.0
SYD3_k127_9780254_11 Isocitrate lyase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 380.0
SYD3_k127_9780254_12 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 376.0
SYD3_k127_9780254_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 342.0
SYD3_k127_9780254_14 ATPases associated with a variety of cellular activities K01996,K11958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000416 323.0
SYD3_k127_9780254_15 Short-chain dehydrogenase reductase sdr - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 310.0
SYD3_k127_9780254_16 Amidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 316.0
SYD3_k127_9780254_17 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009723 315.0
SYD3_k127_9780254_18 Branched-chain amino acid ATP-binding cassette transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 296.0
SYD3_k127_9780254_19 UTRA K03710 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001395 271.0
SYD3_k127_9780254_2 Aconitase family (aconitate hydratase) K01703 - 4.2.1.33,4.2.1.35 5.067e-229 716.0
SYD3_k127_9780254_20 PFAM ABC transporter related K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003686 268.0
SYD3_k127_9780254_21 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004653 267.0
SYD3_k127_9780254_22 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001582 263.0
SYD3_k127_9780254_23 Glycosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000002712 232.0
SYD3_k127_9780254_24 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000001857 220.0
SYD3_k127_9780254_25 KR domain K00038 - 1.1.1.53 0.000000000000000000000000000000000000000000000000000000000001819 218.0
SYD3_k127_9780254_26 Aconitase C-terminal domain K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000002255 212.0
SYD3_k127_9780254_27 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000005038 214.0
SYD3_k127_9780254_28 Protein of unknown function (DUF2497) K09991 - - 0.0000000000000000000000000000000000000000000000000000000008949 209.0
SYD3_k127_9780254_29 Outer membrane protein beta-barrel domain K16079 - - 0.00000000000000000000000000000000000000000000000006172 194.0
SYD3_k127_9780254_3 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 566.0
SYD3_k127_9780254_30 Acyltransferase family - - - 0.000000000000000000000000000000000000000000000000292 192.0
SYD3_k127_9780254_31 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000009987 182.0
SYD3_k127_9780254_32 iron ion binding - - - 0.0000000000000000000000000000000000000007244 158.0
SYD3_k127_9780254_33 O-acyltransferase activity - - - 0.0000000000000000000000000000000000003195 144.0
SYD3_k127_9780254_34 thioesterase K01075 - 3.1.2.23 0.00000000000000000000000000000157 127.0
SYD3_k127_9780254_35 - - - - 0.000000000000000000000000000009166 132.0
SYD3_k127_9780254_36 NAD(P)H-binding K01784 - 5.1.3.2 0.0000000000000000000000000002643 125.0
SYD3_k127_9780254_37 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000002919 89.0
SYD3_k127_9780254_39 transferase activity, transferring glycosyl groups - - - 0.000005121 49.0
SYD3_k127_9780254_4 Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002148 547.0
SYD3_k127_9780254_5 CoA-transferase family III K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004147 542.0
SYD3_k127_9780254_6 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 527.0
SYD3_k127_9780254_7 Bacterial extracellular solute-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 442.0
SYD3_k127_9780254_8 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004355 429.0
SYD3_k127_9780254_9 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 422.0
SYD3_k127_9815445_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01835 - 5.4.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002726 430.0
SYD3_k127_9815445_1 PFAM luciferase family protein - - - 0.000134 44.0
SYD3_k127_9821853_0 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 2.579e-310 954.0
SYD3_k127_9821853_1 Peptidase S24-like - - - 0.00000000000000000000000001052 109.0
SYD3_k127_9861388_0 4Fe-4S binding domain K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000001365 95.0
SYD3_k127_9861388_1 Reductive dehalogenase subunit K21566 - - 0.00000000000000001313 89.0
SYD3_k127_9861388_2 dehalogenase' - - - 0.00000001192 64.0
SYD3_k127_9867932_0 transposase - - - 0.0000000000000000000000000000000000000000000000000000000003074 216.0
SYD3_k127_9867932_1 gluconolactonase activity K07214,K09689 - 3.6.3.38 0.00000000000000000000000000000000000001675 145.0
SYD3_k127_9884810_0 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000008184 159.0
SYD3_k127_9884810_1 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000000000000000000000000003524 147.0
SYD3_k127_9884810_2 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032940,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000007507 102.0
SYD3_k127_9884810_3 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000000000009143 80.0
SYD3_k127_99965_0 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead domain K03520 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 450.0
SYD3_k127_99965_1 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 371.0
SYD3_k127_99965_2 NMT1-like family - - - 0.00000000000000000000000000000000000002296 156.0
SYD3_k127_99965_3 Belongs to the UbiD family - - - 0.00000000005147 65.0