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Overview

ID MAG03799
Name SYD3_bin.34
Sample SMP0096
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Thermoanaerobaculia
Order UBA5066
Family Gp7-AA6
Genus JAWOLE01
Species
Assembly information
Completeness (%) 65.29
Contamination (%) 0.01
GC content (%) 67.0
N50 (bp) 13,224
Genome size (bp) 2,502,776

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2143

Gene name Description KEGG GOs EC E-value Score Sequence
SYD3_k127_10000827_0 PFAM Type II secretion system protein E K02652 - - 2.149e-216 685.0
SYD3_k127_10000827_1 PFAM Type II secretion system F domain K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006009 284.0
SYD3_k127_10000827_2 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000003406 274.0
SYD3_k127_10000827_3 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000002093 168.0
SYD3_k127_10000827_4 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.000000000000000000000375 105.0
SYD3_k127_10000827_5 general secretion pathway protein D K02453 - - 0.0003182 51.0
SYD3_k127_10033180_0 glycosyl hydrolase, BNR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000527 393.0
SYD3_k127_10033180_1 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001021 237.0
SYD3_k127_10033180_2 - - - - 0.00000000000000000000000017 121.0
SYD3_k127_10033180_3 - - - - 0.0000000000001616 72.0
SYD3_k127_10033180_4 - - - - 0.00002835 50.0
SYD3_k127_1011854_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 469.0
SYD3_k127_1011854_1 NAD(P)H-binding K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000094 213.0
SYD3_k127_1011854_10 carboxylic ester hydrolase activity - - - 0.00001567 53.0
SYD3_k127_1011854_2 Protein of unknown function, DUF547 - - - 0.00000000000000000000000000000000000000000000009761 181.0
SYD3_k127_1011854_3 LD-carboxypeptidase K01297 - 3.4.17.13 0.000000000000000000000000005343 123.0
SYD3_k127_1011854_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000002265 113.0
SYD3_k127_1011854_5 CHRD domain - - - 0.000000000000000000008484 106.0
SYD3_k127_1011854_7 Domain of unknown function (DUF4126) - - - 0.000000001781 69.0
SYD3_k127_1011854_8 HEAT repeats - - - 0.0000003253 63.0
SYD3_k127_1011854_9 - - - - 0.0000006355 63.0
SYD3_k127_10226867_0 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007956 336.0
SYD3_k127_10226867_1 uracil-DNA glycosylase K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000002716 259.0
SYD3_k127_10226867_2 Peptidase family M23 K21472 - - 0.00000000000000000000000000000000000000000000000000000000007536 212.0
SYD3_k127_10226867_3 Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000000000000000000000000000000000000000001088 210.0
SYD3_k127_10228091_0 methionyl-tRNA aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008461 454.0
SYD3_k127_10228091_1 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 327.0
SYD3_k127_10228091_2 RadC-like JAB domain K03630 - - 0.0000000000000000000000000000000000000000000000006947 186.0
SYD3_k127_10228091_3 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000001544 143.0
SYD3_k127_10228091_4 Protein of unknown function (DUF2905) - - - 0.0000000003295 63.0
SYD3_k127_10228091_5 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.0000001308 60.0
SYD3_k127_10228091_6 - - - - 0.000009893 50.0
SYD3_k127_10237028_0 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 387.0
SYD3_k127_10237028_1 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000006044 235.0
SYD3_k127_10237028_2 PFAM Phage derived protein Gp49-like (DUF891) - - - 0.0000000000000000000000000000000000000000000000000000000005887 204.0
SYD3_k127_10237028_3 addiction module antidote protein HigA - - - 0.00000000000000000000000000000000000001931 145.0
SYD3_k127_10237028_4 Bacterial membrane protein YfhO - - - 0.0000000000001455 82.0
SYD3_k127_10405994_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006753 567.0
SYD3_k127_10405994_1 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 409.0
SYD3_k127_10405994_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 326.0
SYD3_k127_10405994_3 Uncharacterized protein conserved in bacteria (DUF2155) - - - 0.0000000000000000001494 103.0
SYD3_k127_10405994_4 Domain of unknown function (DUF4154) - - - 0.0000000000000004667 86.0
SYD3_k127_10405994_5 PFAM regulatory protein, MerR - - - 0.00000000000002901 83.0
SYD3_k127_10412364_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 406.0
SYD3_k127_10412364_1 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 349.0
SYD3_k127_10412364_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 295.0
SYD3_k127_10488996_0 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 380.0
SYD3_k127_10488996_1 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 330.0
SYD3_k127_10488996_2 Threonine dehydratase K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 329.0
SYD3_k127_10488996_3 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000001255 229.0
SYD3_k127_10488996_4 YXWGXW repeat (2 copies) - - - 0.000000000000000000001998 97.0
SYD3_k127_10488996_5 Sel1-like repeats. - - - 0.0000000000415 64.0
SYD3_k127_10502941_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002971 595.0
SYD3_k127_10502941_1 SMART protein phosphatase 2C domain protein K07315 - 3.1.3.3 0.00000000000000000000000000000000001844 156.0
SYD3_k127_10502941_2 Two component regulator propeller K17763 - - 0.0000000000000000000000000005583 128.0
SYD3_k127_10548220_0 glutamine synthetase K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 602.0
SYD3_k127_10548220_1 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 539.0
SYD3_k127_10548220_10 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000003622 260.0
SYD3_k127_10548220_11 PFAM Kelch motif - - - 0.00000000000000000000000000000000000000000000000000000000000003107 226.0
SYD3_k127_10548220_12 Predicted nucleotide-binding protein containing TIR-like domain - - - 0.000000000000000000000000000000000000000000000000000000000001967 220.0
SYD3_k127_10548220_13 Prephenate dehydratase K04518 - 4.2.1.51 0.000000000000000000000000000000000000000000000000000000000002962 233.0
SYD3_k127_10548220_14 Adenylylsulfate kinase K00860 - 2.7.1.25 0.00000000000000000000000000000000000006721 151.0
SYD3_k127_10548220_15 Virulence factor BrkB K07058 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000008855 93.0
SYD3_k127_10548220_16 Integrase core domain - - - 0.000000000001088 70.0
SYD3_k127_10548220_17 HNH endonuclease - - - 0.000000001015 62.0
SYD3_k127_10548220_2 COG1335 Amidases related to nicotinamidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 471.0
SYD3_k127_10548220_3 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 387.0
SYD3_k127_10548220_4 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 363.0
SYD3_k127_10548220_5 Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 371.0
SYD3_k127_10548220_6 DAHP synthetase I family K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 349.0
SYD3_k127_10548220_7 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 327.0
SYD3_k127_10548220_8 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 297.0
SYD3_k127_10548220_9 PFAM Sodium hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008699 284.0
SYD3_k127_10575634_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 2.224e-207 680.0
SYD3_k127_10575634_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000176 238.0
SYD3_k127_10575634_2 histidine kinase, HAMP K13598 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000005111 234.0
SYD3_k127_10575634_3 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000003871 178.0
SYD3_k127_10575634_4 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000001615 175.0
SYD3_k127_10575634_5 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000002471 179.0
SYD3_k127_10575634_6 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000001103 156.0
SYD3_k127_10575634_7 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.0000000000000000008934 97.0
SYD3_k127_10575634_8 PFAM Peptidase M22, glycoprotease K14742 - - 0.000000000000000002282 93.0
SYD3_k127_10575634_9 Protein of unknown function (DUF465) - - - 0.0003834 46.0
SYD3_k127_10613690_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 1.681e-240 760.0
SYD3_k127_10613690_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000259 279.0
SYD3_k127_10613690_2 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000001426 182.0
SYD3_k127_10613690_3 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000009151 141.0
SYD3_k127_10613690_4 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000001051 82.0
SYD3_k127_10700010_0 PDZ DHR GLGF domain protein K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 340.0
SYD3_k127_10700010_1 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000001134 196.0
SYD3_k127_10700010_2 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000001976 169.0
SYD3_k127_10756221_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 4.23e-294 918.0
SYD3_k127_10756221_1 Belongs to the UbiD family K03182 - 4.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005473 613.0
SYD3_k127_10756221_10 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.00000000000000000000000000000000000000000000000002429 207.0
SYD3_k127_10756221_11 response regulator - - - 0.0000000000000000000000000000000000000000000000001771 192.0
SYD3_k127_10756221_12 riboflavin synthase, alpha K00793 GO:0003674,GO:0003824,GO:0004746,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.9 0.0000000000000000000000000000000000000000008354 174.0
SYD3_k127_10756221_13 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.0000000000000000000000000000000005634 141.0
SYD3_k127_10756221_14 Tetratricopeptide repeat - - - 0.000000000000000000000000000009639 131.0
SYD3_k127_10756221_15 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.00000000000000000000000000003701 138.0
SYD3_k127_10756221_16 Glutathione peroxidase - - - 0.00000000000000000000001756 109.0
SYD3_k127_10756221_17 oxidoreductase activity - - - 0.0000000000000000000002161 113.0
SYD3_k127_10756221_18 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.00000000000000000001138 97.0
SYD3_k127_10756221_19 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.00000000000000000002544 96.0
SYD3_k127_10756221_2 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 582.0
SYD3_k127_10756221_20 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000006619 98.0
SYD3_k127_10756221_21 TIGRFAM TonB K03832 - - 0.00000000000005409 81.0
SYD3_k127_10756221_22 Tetratricopeptide repeat - - - 0.0000000005297 72.0
SYD3_k127_10756221_23 Belongs to the ompA family K03286 - - 0.0000002049 63.0
SYD3_k127_10756221_24 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000002665 57.0
SYD3_k127_10756221_3 PFAM tRNA synthetase, class II (G, H, P and S) K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 357.0
SYD3_k127_10756221_4 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004197 354.0
SYD3_k127_10756221_5 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 327.0
SYD3_k127_10756221_6 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 314.0
SYD3_k127_10756221_7 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005471 307.0
SYD3_k127_10756221_8 MotA TolQ ExbB proton channel K03561,K03562 - - 0.000000000000000000000000000000000000000000000000000000000000000003703 233.0
SYD3_k127_10756221_9 Involved in the biosynthesis of porphyrin-containing compound - GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000002003 222.0
SYD3_k127_10807574_0 Berberine and berberine like - - - 1.416e-218 685.0
SYD3_k127_10807574_1 Alpha-amylase domain K01176 - 3.2.1.1 5.856e-218 687.0
SYD3_k127_10807574_10 ABC transporter K09817 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005866 276.0
SYD3_k127_10807574_11 Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004891 278.0
SYD3_k127_10807574_12 ErfK YbiS YcfS YnhG - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001114 267.0
SYD3_k127_10807574_13 ABC 3 transport family K09819,K11606,K11708,K11709 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002416 250.0
SYD3_k127_10807574_14 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000000000000000000000000000000000000000000000000002297 194.0
SYD3_k127_10807574_15 BON domain - - - 0.0000000000000000000000000000000000000000000000001898 194.0
SYD3_k127_10807574_16 Putative cyclase K07130 GO:0003674,GO:0003824,GO:0004061,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.0000000000000000000000000000000000003862 153.0
SYD3_k127_10807574_17 Universal stress protein family - - - 0.00000000000000000000000000000000002716 139.0
SYD3_k127_10807574_18 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000004247 128.0
SYD3_k127_10807574_19 Tetratricopeptide repeat - - - 0.00000000000000000000000000001334 130.0
SYD3_k127_10807574_2 Sugar ABC transporter permease K10109,K15770,K15771 - - 3.988e-217 696.0
SYD3_k127_10807574_20 PFAM CBS domain containing protein K07168 - - 0.000000000000000000000215 111.0
SYD3_k127_10807574_21 Dodecin K09165 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.00000000000000000006373 99.0
SYD3_k127_10807574_22 PFAM Uncharacterised protein family (UPF0227) K07000 - - 0.000000000000000002525 98.0
SYD3_k127_10807574_23 protein conserved in bacteria - - - 0.000000000000009209 86.0
SYD3_k127_10807574_24 - - - - 0.00000000000009095 77.0
SYD3_k127_10807574_25 Yip1 domain - - - 0.0000000000001957 84.0
SYD3_k127_10807574_26 - - - - 0.000000000426 70.0
SYD3_k127_10807574_3 Bacterial extracellular solute-binding protein K10108,K15770 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 603.0
SYD3_k127_10807574_4 Belongs to the ABC transporter superfamily K05816,K10111,K10112 - 3.6.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005407 529.0
SYD3_k127_10807574_5 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009487 379.0
SYD3_k127_10807574_6 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008299 363.0
SYD3_k127_10807574_7 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008982 324.0
SYD3_k127_10807574_8 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 301.0
SYD3_k127_10807574_9 Binding-protein-dependent transport system inner membrane component K10110,K15772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003923 299.0
SYD3_k127_1082876_0 PFAM permease K07089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005702 449.0
SYD3_k127_1082876_1 AcrB/AcrD/AcrF family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007902 387.0
SYD3_k127_1082876_10 PFAM SpoVT AbrB K07172,K18842 - - 0.00000000000000001782 84.0
SYD3_k127_1082876_11 Does not function as a glutathione-disulfide oxidoreductase in the presence of glutathione and glutathione reductase. Has low thioredoxin activity in vitro - - - 0.00000000000001446 83.0
SYD3_k127_1082876_2 response to heat K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000559 366.0
SYD3_k127_1082876_3 Growth inhibitor K07171 - - 0.00000000000000000000000000000000000000000000000003156 183.0
SYD3_k127_1082876_4 Predicted membrane protein (DUF2127) - - - 0.00000000000000000000000000000000000001506 149.0
SYD3_k127_1082876_5 PIN domain - - - 0.00000000000000000000000000000000006478 139.0
SYD3_k127_1082876_6 low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.0000000000000000000000000000000001242 136.0
SYD3_k127_1082876_7 Protein of unknown function (DUF1634) - - - 0.0000000000000000000000002902 115.0
SYD3_k127_1082876_8 Protein of unknown function (DUF3018) - - - 0.0000000000000000000007096 100.0
SYD3_k127_1082876_9 Transcriptional regulator K03892,K21903 - - 0.00000000000000001758 88.0
SYD3_k127_10886024_0 - - - - 0.000000000000000000000000000005285 136.0
SYD3_k127_10886024_1 - - - - 0.000000000000000000000000009779 122.0
SYD3_k127_10886024_2 Cytochrome P450 - - - 0.000000000000000000000411 99.0
SYD3_k127_10886024_3 Epoxide hydrolase N terminus - - - 0.00002263 52.0
SYD3_k127_1164781_0 Phospholipase D Transphosphatidylase K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009288 365.0
SYD3_k127_1164781_1 DNA polymerase III subunit epsilon K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000001195 250.0
SYD3_k127_1164781_2 WYL domain K13572 - - 0.0000000000000000006729 93.0
SYD3_k127_1204270_0 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005605 557.0
SYD3_k127_1204270_1 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004872 537.0
SYD3_k127_1204270_10 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000781 201.0
SYD3_k127_1204270_11 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000028,GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070475,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140102,GO:1901360,GO:1901363 2.1.1.182 0.000000000000000000000000000000000000000000003716 174.0
SYD3_k127_1204270_12 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000008737 161.0
SYD3_k127_1204270_13 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000001097 142.0
SYD3_k127_1204270_14 Bacterial-like globin K06886 - - 0.0000000000000000000000000000005727 134.0
SYD3_k127_1204270_16 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.000000000000000000000228 113.0
SYD3_k127_1204270_17 Bacterial Ig-like domain 2 - - - 0.00000000000000001913 93.0
SYD3_k127_1204270_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008769 495.0
SYD3_k127_1204270_3 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 460.0
SYD3_k127_1204270_4 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 367.0
SYD3_k127_1204270_5 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000004767 256.0
SYD3_k127_1204270_6 Memo-like protein K06990 - - 0.0000000000000000000000000000000000000000000000000000000000000000004099 241.0
SYD3_k127_1204270_7 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000658 220.0
SYD3_k127_1204270_8 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000002086 223.0
SYD3_k127_1204270_9 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000004395 203.0
SYD3_k127_127993_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 578.0
SYD3_k127_127993_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009857 424.0
SYD3_k127_127993_2 Dihydroxyacetone kinase family K07030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 424.0
SYD3_k127_127993_3 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00282 GO:0001505,GO:0003674,GO:0003824,GO:0004375,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006807,GO:0008150,GO:0008152,GO:0009069,GO:0009987,GO:0016491,GO:0016638,GO:0016642,GO:0017144,GO:0019752,GO:0032991,GO:0042133,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901605,GO:1902494,GO:1990204 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006969 416.0
SYD3_k127_127993_4 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000003857 153.0
SYD3_k127_127993_5 - - - - 0.000000006949 61.0
SYD3_k127_1290049_0 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002862 257.0
SYD3_k127_1290049_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.00000000000000000000000000000000000000000000000002203 181.0
SYD3_k127_1290049_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000001206 172.0
SYD3_k127_1290049_3 Fibronectin type 3 domain - - - 0.0000000000000000001653 102.0
SYD3_k127_1355917_0 Glycosyl transferase family group 2 K07011 - - 0.0000000000000000000000000000000000000000000000009165 189.0
SYD3_k127_1355917_1 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000006021 154.0
SYD3_k127_1355917_2 cell adhesion involved in biofilm formation - - - 0.0002018 52.0
SYD3_k127_1370533_0 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 0.0 1389.0
SYD3_k127_1370533_1 Glycosyl hydrolases family 15 - - - 2.257e-213 680.0
SYD3_k127_1370533_2 Glycosyltransferase family 20 K00697 - 2.4.1.15,2.4.1.347 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008988 370.0
SYD3_k127_1370533_3 transmembrane transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 355.0
SYD3_k127_1370533_4 Chloride channel protein EriC K03281 - - 0.000000000000000000000001058 111.0
SYD3_k127_1370533_5 PFAM Glycoside hydrolase 15-related K01178 - 3.2.1.3 0.0000008834 50.0
SYD3_k127_1393948_0 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000994 376.0
SYD3_k127_1393948_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 314.0
SYD3_k127_1393948_10 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.000000006994 66.0
SYD3_k127_1393948_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008907 312.0
SYD3_k127_1393948_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 315.0
SYD3_k127_1393948_4 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001014 270.0
SYD3_k127_1393948_5 Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000001548 212.0
SYD3_k127_1393948_6 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000001096 138.0
SYD3_k127_1393948_7 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000008262 104.0
SYD3_k127_1393948_8 Cation efflux family - - - 0.0000000000000000000005244 106.0
SYD3_k127_1393948_9 - - - - 0.000000000000000000001097 100.0
SYD3_k127_1464389_0 Angiotensin-converting enzyme K01283 - 3.4.15.1 2.202e-246 769.0
SYD3_k127_1464389_1 Bacterial protein of unknown function (DUF885) - - - 3.152e-229 723.0
SYD3_k127_1464389_2 TIGRFAM Methylglyoxal synthase K01734 - 4.2.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000001264 246.0
SYD3_k127_1469301_0 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003811 482.0
SYD3_k127_1469301_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 322.0
SYD3_k127_1469301_2 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002097 289.0
SYD3_k127_1469301_3 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000004747 128.0
SYD3_k127_1469301_4 Adenylate cyclase - - - 0.0000000000000001379 88.0
SYD3_k127_1469301_5 Forkhead associated domain - - - 0.0000000007425 68.0
SYD3_k127_1470248_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 8.346e-216 706.0
SYD3_k127_1470248_1 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007863 306.0
SYD3_k127_1470248_2 D-arabinono-1,4-lactone oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005686 304.0
SYD3_k127_1470248_3 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000000000000000000000000000000000000009032 223.0
SYD3_k127_1470248_4 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000007305 170.0
SYD3_k127_1470248_5 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000001171 177.0
SYD3_k127_1470248_6 SMART protein phosphatase 2C domain protein - - - 0.0000000000000000000000000005948 130.0
SYD3_k127_1470248_7 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000000000000000000000000007765 128.0
SYD3_k127_1470248_8 Uncharacterised protein family UPF0066 K01628 - 4.1.2.17 0.0000000000000000000002614 100.0
SYD3_k127_1470248_9 HIT family hydrolase K02503 - - 0.00000000000000005967 87.0
SYD3_k127_1479593_0 ATP-grasp domain K01905,K22224 - 6.2.1.13 4.696e-291 920.0
SYD3_k127_1479593_1 CoA binding domain K01905,K22224 - 6.2.1.13 8.9e-204 654.0
SYD3_k127_1479593_10 ABC transporter K01996 - - 0.00000000000000000000000000000000002395 145.0
SYD3_k127_1479593_11 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000009762 132.0
SYD3_k127_1479593_12 Thioesterase - - - 0.00000000000000000000000007254 121.0
SYD3_k127_1479593_13 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000008247 101.0
SYD3_k127_1479593_14 Winged helix DNA-binding domain - - - 0.000000002054 65.0
SYD3_k127_1479593_2 Belongs to the aldehyde dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 541.0
SYD3_k127_1479593_3 AMP-binding enzyme C-terminal domain K08295 - 6.2.1.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 485.0
SYD3_k127_1479593_4 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004476 341.0
SYD3_k127_1479593_5 Alpha beta hydrolase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 291.0
SYD3_k127_1479593_6 amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000001593 260.0
SYD3_k127_1479593_7 Peptidase family U32 K08303 - - 0.0000000000000000000000000000000000000000000022 175.0
SYD3_k127_1479593_8 PAS sensor protein - - - 0.00000000000000000000000000000000000000000005846 182.0
SYD3_k127_1479593_9 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 0.00000000000000000000000000000000000000001368 173.0
SYD3_k127_1528361_0 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 443.0
SYD3_k127_1528361_1 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005338 336.0
SYD3_k127_1528361_2 Belongs to the FPG family K05522,K10563 GO:0000702,GO:0000703,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0003906,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006289,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0008150,GO:0008152,GO:0008534,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034599,GO:0034641,GO:0042221,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0070887,GO:0071704,GO:0090304,GO:0097159,GO:0097506,GO:0140097,GO:1901360,GO:1901363 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000002331 235.0
SYD3_k127_1528361_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000003947 225.0
SYD3_k127_1528361_4 Beta-lactamase - - - 0.000000000000000000000000000000000000000001352 173.0
SYD3_k127_1528361_5 - - - - 0.000000000000000000000000000003683 135.0
SYD3_k127_1528361_6 calcium- and calmodulin-responsive adenylate cyclase activity K01406 - 3.4.24.40 0.000000000000000000002589 99.0
SYD3_k127_1528361_7 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000000000000002731 95.0
SYD3_k127_1529979_0 Sortilin, neurotensin receptor 3, - - - 0.0 1240.0
SYD3_k127_1529979_1 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 313.0
SYD3_k127_1529979_2 ABC transporter related K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 295.0
SYD3_k127_1529979_3 PFAM ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004333 296.0
SYD3_k127_1529979_4 Dna alkylation repair - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000321 265.0
SYD3_k127_1529979_5 glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000003966 234.0
SYD3_k127_1529979_6 PFAM Branched-chain amino acid transport system permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000294 202.0
SYD3_k127_1529979_7 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000000000000000000000000000001908 204.0
SYD3_k127_1529979_8 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000000000000001278 83.0
SYD3_k127_1529979_9 - - - - 0.000000000002662 68.0
SYD3_k127_1538729_0 E1-E2 ATPase K01535 - 3.6.3.6 4.312e-306 961.0
SYD3_k127_1538729_1 PFAM UBA THIF-type NAD FAD binding K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005218 606.0
SYD3_k127_1538729_10 Methionine biosynthesis protein MetW - - - 0.00000000000000000001772 99.0
SYD3_k127_1538729_11 peptidyl-tyrosine sulfation - - - 0.0000000002466 75.0
SYD3_k127_1538729_2 belongs to the thioredoxin family K05838 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 457.0
SYD3_k127_1538729_3 Pyridoxal-phosphate dependent enzyme K12339,K21148 - 2.5.1.113,2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 377.0
SYD3_k127_1538729_4 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 0.000000000000000000000000000000000000000000000000000000000000000001182 235.0
SYD3_k127_1538729_5 PFAM ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000002095 234.0
SYD3_k127_1538729_6 Protein of unknown function (DUF1211) - - - 0.00000000000000000000000000000000000000000000000000003532 196.0
SYD3_k127_1538729_7 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000000007638 133.0
SYD3_k127_1538729_8 JAB1/Mov34/MPN/PAD-1 ubiquitin protease - - - 0.000000000000000000000000000000003442 134.0
SYD3_k127_1538729_9 UBA THIF-type NAD FAD binding protein K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000001081 122.0
SYD3_k127_1564574_0 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.00000000000000000000000000000000000000000000000002263 197.0
SYD3_k127_1564574_1 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.0000000000000000000000000000005998 133.0
SYD3_k127_1564574_2 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.00000000000000000002565 104.0
SYD3_k127_1564574_3 arylamine N-acetyltransferase activity - - - 0.00000001612 66.0
SYD3_k127_1564574_4 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0008614,GO:0009058,GO:0009108,GO:0009110,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016829,GO:0016840,GO:0016843,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0040007,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0071496,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902494,GO:1903600 4.3.3.6 0.0000003431 52.0
SYD3_k127_161288_0 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006165 286.0
SYD3_k127_161288_1 Polysulphide reductase, NrfD - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000001195 164.0
SYD3_k127_161288_2 phosphorelay signal transduction system K02437 - - 0.00000000000000000000000000005704 127.0
SYD3_k127_161288_3 PFAM glycine cleavage H-protein - - - 0.0000000000000000000000000007718 123.0
SYD3_k127_161288_4 Prokaryotic cytochrome b561 - - - 0.000000000003955 68.0
SYD3_k127_1666689_0 Belongs to the ClpA ClpB family K03696 - - 3.743e-285 897.0
SYD3_k127_1666689_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009721 533.0
SYD3_k127_1666689_2 Surface antigen variable number K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007477 366.0
SYD3_k127_1666689_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 295.0
SYD3_k127_1666689_4 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.00000000000000000000000000000000000000000000000000000000000472 220.0
SYD3_k127_1666689_5 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000003143 113.0
SYD3_k127_1666689_6 Outer membrane protein (OmpH-like) K06142 - - 0.0000002049 63.0
SYD3_k127_1671028_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 8.485e-266 843.0
SYD3_k127_1671028_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 346.0
SYD3_k127_1680241_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1283.0
SYD3_k127_1680241_1 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000002072 176.0
SYD3_k127_1680241_2 TIGRFAM VWFA-related Acidobacterial domain - - - 0.0000000000000000000000000000003409 143.0
SYD3_k127_1680241_3 Diguanylate cyclase - - - 0.00000000000000000000000000009271 129.0
SYD3_k127_1680241_4 chaperone-mediated protein folding - - - 0.000000000000001067 92.0
SYD3_k127_1847535_0 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 310.0
SYD3_k127_1847535_1 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000003911 138.0
SYD3_k127_1847535_2 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000008724 136.0
SYD3_k127_1847535_3 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.000000000000000000000000000000495 126.0
SYD3_k127_1847535_4 PIN domain - - - 0.00000000000000000000003837 103.0
SYD3_k127_1847535_5 - - - - 0.00000000000001861 78.0
SYD3_k127_1854464_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278 - 3.4.14.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008362 512.0
SYD3_k127_1854464_1 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007276 477.0
SYD3_k127_1854464_10 nuclease activity - - - 0.00000000000000000000000000000000002088 141.0
SYD3_k127_1854464_11 - - - - 0.00000000000000000000000000001146 138.0
SYD3_k127_1854464_12 endo-1,4-beta-xylanase activity - GO:0005575,GO:0005576 - 0.000000000000000000000000001453 127.0
SYD3_k127_1854464_13 Anti-sigma-K factor rskA - - - 0.000000000000000000000001209 113.0
SYD3_k127_1854464_14 nucleotidyltransferase activity K17882 - - 0.0000001343 59.0
SYD3_k127_1854464_15 Belongs to the peptidase S8 family - - - 0.000001957 55.0
SYD3_k127_1854464_2 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 488.0
SYD3_k127_1854464_3 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 435.0
SYD3_k127_1854464_4 Fructose-1-6-bisphosphatase, N-terminal domain K03841 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002567 342.0
SYD3_k127_1854464_5 Domain of unknown function (DUF4331) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 327.0
SYD3_k127_1854464_6 HupE / UreJ protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000075 238.0
SYD3_k127_1854464_7 cytochrome - - - 0.0000000000000000000000000000000000000000000000000002764 209.0
SYD3_k127_1854464_8 HEPN domain - - - 0.00000000000000000000000000000000000000000000008003 190.0
SYD3_k127_1854464_9 ECF sigma factor K03088 - - 0.000000000000000000000000000000000000000000301 165.0
SYD3_k127_1896134_0 PFAM Pyridoxal-dependent decarboxylase K01580 - 4.1.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 593.0
SYD3_k127_1896134_1 Peptidase family M50 K06212,K06402 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 466.0
SYD3_k127_1896134_2 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008374 317.0
SYD3_k127_1896134_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005854 307.0
SYD3_k127_1896134_4 GAF domain K08968 - 1.8.4.14 0.0000000000000000000000000001333 120.0
SYD3_k127_1896134_5 - - - - 0.00000000000000000000000004656 113.0
SYD3_k127_1896134_6 phosphorelay signal transduction system - - - 0.00000000000000000000000006495 121.0
SYD3_k127_1896134_7 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000009614 109.0
SYD3_k127_1896134_9 Carboxymuconolactone decarboxylase family - - - 0.0000000000000003361 81.0
SYD3_k127_1896853_0 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 438.0
SYD3_k127_1896853_1 Serine phosphatase RsbU, regulator of sigma subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 381.0
SYD3_k127_1896853_2 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000004883 235.0
SYD3_k127_1896853_3 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000005706 192.0
SYD3_k127_1896853_4 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000002789 148.0
SYD3_k127_1896853_5 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749,K04757 - 2.7.11.1 0.00000000000000000000004531 115.0
SYD3_k127_1896853_6 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749,K06378 - - 0.0000000000004072 74.0
SYD3_k127_1899182_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 1.372e-204 647.0
SYD3_k127_1899182_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005579 436.0
SYD3_k127_1899182_2 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 296.0
SYD3_k127_1899182_3 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000002411 115.0
SYD3_k127_1899182_4 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000004615 96.0
SYD3_k127_1899182_5 Ribosomal protein L34 K02914 - - 0.00000000000006908 72.0
SYD3_k127_1899182_6 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000001854 70.0
SYD3_k127_2004691_0 Ribosomal protein S1 K02945,K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 613.0
SYD3_k127_2004691_1 DegT/DnrJ/EryC1/StrS aminotransferase family K12452 - 1.17.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 351.0
SYD3_k127_2004691_2 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 327.0
SYD3_k127_2004691_3 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 308.0
SYD3_k127_2004691_4 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005247 283.0
SYD3_k127_2004691_5 PFAM Histidine triad (HIT) protein K19710 - 2.7.7.53 0.000000000000000000000000000000000000000000000000002889 186.0
SYD3_k127_2004691_6 Cytidylate kinase K00945 - 2.7.4.25 0.000000000000000000000000000000000000000000000007245 179.0
SYD3_k127_2004691_7 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.000000000000000000000000000004134 126.0
SYD3_k127_2004691_8 TM2 domain - - - 0.00007754 53.0
SYD3_k127_2008647_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004607 556.0
SYD3_k127_2008647_1 PFAM amine oxidase K01854 - 5.4.99.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008338 424.0
SYD3_k127_2008647_2 PFAM NHL repeat containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000355 236.0
SYD3_k127_2008647_3 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000005158 202.0
SYD3_k127_2008647_4 UbiA prenyltransferase family - - - 0.00000000000000000000000000000000000000000000000006325 190.0
SYD3_k127_2008647_5 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.00000000000000000000000000000000000000004658 157.0
SYD3_k127_2008647_6 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000006644 135.0
SYD3_k127_2008647_7 Methyltransferase domain - - - 0.0000000000000000000000003051 123.0
SYD3_k127_2055833_0 Class II vitamin B12-dependent ribonucleotide reductase K00525 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.17.4.1 0.0 1231.0
SYD3_k127_2055833_1 Tetratricopeptide repeats K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 567.0
SYD3_k127_2055833_10 PFAM regulatory protein, MarR - - - 0.00000000000000000000000000000001752 131.0
SYD3_k127_2055833_11 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000001192 127.0
SYD3_k127_2055833_12 - - - - 0.0000000000000000000000000000309 125.0
SYD3_k127_2055833_13 Iron--sulfur cluster insertion protein erpA K15724 - - 0.000000000000000000000000005161 114.0
SYD3_k127_2055833_14 Dehydrogenase K05889 - 1.1.2.6 0.000000000002916 71.0
SYD3_k127_2055833_15 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.00000000001742 70.0
SYD3_k127_2055833_17 - - - - 0.000000002353 65.0
SYD3_k127_2055833_18 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0005221 45.0
SYD3_k127_2055833_2 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 451.0
SYD3_k127_2055833_3 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 378.0
SYD3_k127_2055833_4 Protein of unknown function, DUF547 - - - 0.0000000000000000000000000000000000000000000000000000000000000831 220.0
SYD3_k127_2055833_5 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000000000000000233 176.0
SYD3_k127_2055833_6 - - - - 0.0000000000000000000000000000000000000000003215 172.0
SYD3_k127_2055833_7 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000005352 149.0
SYD3_k127_2055833_8 DoxX K15977 - - 0.00000000000000000000000000000000004407 140.0
SYD3_k127_2055833_9 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000002343 132.0
SYD3_k127_2146584_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008011 614.0
SYD3_k127_2146584_1 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006217 580.0
SYD3_k127_2146584_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 334.0
SYD3_k127_2146584_3 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000002276 241.0
SYD3_k127_2146584_4 Homocysteine S-methyltransferase K00547 - 2.1.1.10 0.0000000000000000000000000000000000000000000000000000000001388 215.0
SYD3_k127_2146584_5 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.0000000003429 65.0
SYD3_k127_216953_0 Dehydrogenase E1 component K11381,K21416 - 1.2.4.4 6.282e-277 873.0
SYD3_k127_216953_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 5.539e-275 856.0
SYD3_k127_216953_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821,K09251 - 2.6.1.11,2.6.1.17,2.6.1.82 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007191 422.0
SYD3_k127_216953_3 e3 binding domain K00627 - 2.3.1.12 0.0000000000000000000000000000000000000001222 161.0
SYD3_k127_216953_4 GYD domain - - - 0.0000000000000000000000000002309 120.0
SYD3_k127_216953_5 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0006577 50.0
SYD3_k127_2184919_0 peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 516.0
SYD3_k127_2184919_1 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 301.0
SYD3_k127_2184919_2 Mannosyltransferase (PIG-V) - - - 0.00000000000000000000000003178 124.0
SYD3_k127_2184919_3 Transcription factor zinc-finger K09981 - - 0.0000006752 61.0
SYD3_k127_2227303_0 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 546.0
SYD3_k127_2227303_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 524.0
SYD3_k127_2227303_10 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.000000000000000000000000000009672 130.0
SYD3_k127_2227303_11 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000003245 114.0
SYD3_k127_2227303_12 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000002152 110.0
SYD3_k127_2227303_13 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000000001115 100.0
SYD3_k127_2227303_14 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000009398 96.0
SYD3_k127_2227303_15 hydrolase activity, acting on ester bonds - - - 0.0000272 48.0
SYD3_k127_2227303_2 PFAM IS1 transposase K07480 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005967 388.0
SYD3_k127_2227303_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 385.0
SYD3_k127_2227303_4 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006991 332.0
SYD3_k127_2227303_5 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 331.0
SYD3_k127_2227303_6 electron transfer flavoprotein, alpha subunit K03522,K22432 - 1.3.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004107 287.0
SYD3_k127_2227303_7 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001661 275.0
SYD3_k127_2227303_8 Electron transfer flavoprotein domain K03521 - - 0.000000000000000000000000000000000000000000000000000000000000001722 229.0
SYD3_k127_2227303_9 - - - - 0.0000000000000000000000000000007998 135.0
SYD3_k127_2255830_0 3-isopropylmalate dehydratase activity K01703 - 4.2.1.33,4.2.1.35 8.024e-206 650.0
SYD3_k127_2255830_1 Phosphoenolpyruvate phosphomutase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 334.0
SYD3_k127_2255830_10 - - - - 0.00003723 46.0
SYD3_k127_2255830_11 UPF0391 membrane protein - - - 0.0001545 47.0
SYD3_k127_2255830_2 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004056 334.0
SYD3_k127_2255830_3 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003184 267.0
SYD3_k127_2255830_4 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000071 215.0
SYD3_k127_2255830_5 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000003512 206.0
SYD3_k127_2255830_6 3-isopropylmalate dehydratase activity K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000006029 197.0
SYD3_k127_2255830_7 Protein of unknown function (DUF1326) - - - 0.0000000000000000000000000000000000000000000009513 175.0
SYD3_k127_2255830_8 Domain of unknown function (DUF2383) - - - 0.00000000000001162 87.0
SYD3_k127_2255830_9 - - - - 0.00000001332 57.0
SYD3_k127_2298626_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 2.532e-205 659.0
SYD3_k127_2298626_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 464.0
SYD3_k127_2298626_10 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000001983 231.0
SYD3_k127_2298626_11 flavin adenine dinucleotide binding - - - 0.00000000000000000000000000000000000000000000000000000004632 216.0
SYD3_k127_2298626_12 guanosine tetraphosphate metabolic process K07816 - 2.7.6.5 0.00000000000000000000000000000000000000000000006052 194.0
SYD3_k127_2298626_13 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000002424 110.0
SYD3_k127_2298626_14 Sigma-70 region 2 K03088 - - 0.00000000000000001072 93.0
SYD3_k127_2298626_15 Cysteine dioxygenase type I K00456 - 1.13.11.20 0.000000000005812 73.0
SYD3_k127_2298626_16 ATP-independent chaperone mediated protein folding K06006 - - 0.0000002825 59.0
SYD3_k127_2298626_2 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 441.0
SYD3_k127_2298626_3 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 402.0
SYD3_k127_2298626_4 7TM-HD extracellular K07037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005486 416.0
SYD3_k127_2298626_5 Dehydrogenase K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008125 386.0
SYD3_k127_2298626_6 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 377.0
SYD3_k127_2298626_7 PhoH-like protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 363.0
SYD3_k127_2298626_8 KH domain K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008929 277.0
SYD3_k127_2298626_9 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000004864 252.0
SYD3_k127_2301709_0 PFAM glycosyl hydrolase BNR repeat-containing protein - - - 0.0 1129.0
SYD3_k127_2301709_1 Involved in the tonB-independent uptake of proteins - - - 7.35e-205 688.0
SYD3_k127_2301709_10 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides - - - 0.000000002399 69.0
SYD3_k127_2301709_11 - - - - 0.0000005028 61.0
SYD3_k127_2301709_12 PspA/IM30 family K03969 - - 0.000001136 53.0
SYD3_k127_2301709_2 Zn-dependent protease with chaperone function K03799,K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008628 425.0
SYD3_k127_2301709_3 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 324.0
SYD3_k127_2301709_4 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005474 311.0
SYD3_k127_2301709_5 Putative heavy-metal-binding - - - 0.00000000000000000000000000000000000000007655 153.0
SYD3_k127_2301709_6 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000005874 161.0
SYD3_k127_2301709_7 - K01992,K19341 - - 0.0000000000000000000000000000000000000727 154.0
SYD3_k127_2301709_8 DinB superfamily - - - 0.000000000000000000000000000000000002402 145.0
SYD3_k127_2301709_9 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000004456 141.0
SYD3_k127_2361810_0 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 429.0
SYD3_k127_2361810_1 ATP-grasp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 406.0
SYD3_k127_2361810_2 Na dependent nucleoside transporter K03317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005035 389.0
SYD3_k127_2361810_3 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002659 304.0
SYD3_k127_2361810_4 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K05873,K12960 - 3.5.4.28,3.5.4.31,4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000003611 252.0
SYD3_k127_2361810_5 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000008357 202.0
SYD3_k127_2361810_6 iron-sulfur cluster assembly K07400 - - 0.000000000000000000000000000000000000000002583 175.0
SYD3_k127_2361810_7 Cytidine and deoxycytidylate deaminase zinc-binding region K01489 - 3.5.4.5 0.00000000000000000000000000000000000000009195 154.0
SYD3_k127_2377179_0 Peptidase m28 - - - 3.919e-203 661.0
SYD3_k127_2377179_1 PFAM peptidase M28 - - - 1.152e-201 643.0
SYD3_k127_2377179_2 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 501.0
SYD3_k127_2377179_3 Histidine-specific methyltransferase, SAM-dependent K18911 - 2.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 359.0
SYD3_k127_2377179_4 Glycosyl hydrolase 36 superfamily, catalytic domain K13688,K18786 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.321 0.00000000000000000000000007909 110.0
SYD3_k127_2377179_5 Outer membrane protein beta-barrel domain - - - 0.0000000000008312 76.0
SYD3_k127_2377179_6 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00003453 51.0
SYD3_k127_2407892_0 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 586.0
SYD3_k127_2407892_1 PFAM NAD-dependent epimerase dehydratase K01710,K08678 - 4.1.1.35,4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000826 496.0
SYD3_k127_2407892_10 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000425 167.0
SYD3_k127_2407892_11 MlaD protein K02067 - - 0.0000000000000000000000000000000000001037 157.0
SYD3_k127_2407892_13 4Fe-4S single cluster domain of Ferredoxin I - - - 0.000000000000000000005351 93.0
SYD3_k127_2407892_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007497 362.0
SYD3_k127_2407892_3 Polysaccharide biosynthesis protein K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005032 347.0
SYD3_k127_2407892_4 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002859 281.0
SYD3_k127_2407892_5 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001876 265.0
SYD3_k127_2407892_6 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002354 274.0
SYD3_k127_2407892_7 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000001217 247.0
SYD3_k127_2407892_8 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000448 255.0
SYD3_k127_2407892_9 Appr-1'-p processing enzyme - - - 0.000000000000000000000000000000000000000000003997 168.0
SYD3_k127_2416152_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 8.803e-235 733.0
SYD3_k127_2416152_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.149e-227 716.0
SYD3_k127_2416152_10 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000249 246.0
SYD3_k127_2416152_11 Peptidase dimerisation domain K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000004947 239.0
SYD3_k127_2416152_12 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000001017 226.0
SYD3_k127_2416152_13 mannose-6-phosphate isomerase - - - 0.000000000000000000000000000000000000000000000000000000000002205 210.0
SYD3_k127_2416152_14 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.00000000000000000000000000000000000000000000000007696 186.0
SYD3_k127_2416152_15 Histidine kinase - - - 0.000000000000000000000000000000000000000000000009917 190.0
SYD3_k127_2416152_16 Iodothyronine deiodinase - - - 0.00000000000000000000000006173 111.0
SYD3_k127_2416152_17 Polymer-forming cytoskeletal - - - 0.000000000000000000004362 107.0
SYD3_k127_2416152_18 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000035 95.0
SYD3_k127_2416152_19 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0016020,GO:0016469,GO:0032991,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045259,GO:0045260,GO:0071944,GO:0098796,GO:0098797 - 0.00000003296 64.0
SYD3_k127_2416152_2 Involved in the tonB-independent uptake of proteins - - - 2.254e-205 668.0
SYD3_k127_2416152_20 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000001925 59.0
SYD3_k127_2416152_21 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00002654 55.0
SYD3_k127_2416152_22 - - - - 0.00002937 50.0
SYD3_k127_2416152_3 metal ion transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 541.0
SYD3_k127_2416152_4 D-aminoacylase domain protein K01465,K06015 - 3.5.1.81,3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005536 533.0
SYD3_k127_2416152_5 PFAM natural resistance-associated macrophage protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 514.0
SYD3_k127_2416152_6 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 310.0
SYD3_k127_2416152_7 PFAM Cobyrinic acid ac-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000453 303.0
SYD3_k127_2416152_8 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003092 276.0
SYD3_k127_2416152_9 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006632 280.0
SYD3_k127_2423305_0 PHP domain protein K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000000000214 242.0
SYD3_k127_2423305_1 Glycosyl hydrolase family 1 K05350 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000738 194.0
SYD3_k127_2423305_2 TIGRFAM hopanoid biosynthesis associated glycosyl transferase protein HpnI K00720 - 2.4.1.80 0.00000000000000000000000000000000000000000000000006141 201.0
SYD3_k127_2423305_3 Phosphoglycerate mutase family K08296 - - 0.0000000000000000000017 100.0
SYD3_k127_2423305_4 COG2076 Membrane transporters of cations and cationic drugs K11741 - - 0.000000000000004264 82.0
SYD3_k127_2423305_5 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0002033 46.0
SYD3_k127_2498360_0 PFAM Radical SAM - - - 2.303e-233 755.0
SYD3_k127_2498360_1 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.00000000000000000000000000000000000000000000000000000000000000445 229.0
SYD3_k127_2500876_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005384 379.0
SYD3_k127_2500876_1 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 331.0
SYD3_k127_2500876_2 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003791 282.0
SYD3_k127_2500876_3 PFAM LemA family protein K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000002655 230.0
SYD3_k127_2500876_4 TPM domain K06872 - - 0.00000000000000000000000000000000000000000000000002417 190.0
SYD3_k127_2500876_5 TPM domain - - - 0.000000000000000000000000000000000000003802 154.0
SYD3_k127_2500876_6 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.0000000000000000000000000000000009809 134.0
SYD3_k127_2500876_7 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000002027 87.0
SYD3_k127_2500876_8 Bacterial antitoxin of type II TA system, VapB - - - 0.000000000006948 73.0
SYD3_k127_2523455_0 alpha/beta hydrolase fold K00641 - 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006965 423.0
SYD3_k127_2523455_1 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 375.0
SYD3_k127_2523455_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 307.0
SYD3_k127_2523455_3 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 304.0
SYD3_k127_2523455_4 receptor K02014 - - 0.00000000000000000000000000000006412 144.0
SYD3_k127_2523455_5 PFAM Prephenate dehydratase K04518 - 4.2.1.51 0.000000008267 63.0
SYD3_k127_2523455_6 cellulose binding - - - 0.000000009354 59.0
SYD3_k127_2523455_7 Polysaccharide deacetylase - - - 0.0007191 49.0
SYD3_k127_254607_0 COG0798 Arsenite efflux pump ACR3 and related K03325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009028 492.0
SYD3_k127_254607_1 COG0500 SAM-dependent methyltransferases K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 364.0
SYD3_k127_254607_2 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000006162 170.0
SYD3_k127_254607_3 Uncharacterized ACR, COG1993 K09137 - - 0.00000000000000000000000000000001373 129.0
SYD3_k127_254607_4 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.00000000000000001039 87.0
SYD3_k127_254607_5 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.000000000001237 73.0
SYD3_k127_2630765_0 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000005455 224.0
SYD3_k127_2630765_1 - - - - 0.000000000000000001014 94.0
SYD3_k127_2630765_2 Transcriptional regulatory protein, C terminal - - - 0.0000000000000002295 87.0
SYD3_k127_2686920_0 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009698 598.0
SYD3_k127_2686920_1 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 540.0
SYD3_k127_2686920_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002562 509.0
SYD3_k127_2686920_3 PFAM Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005013 350.0
SYD3_k127_2686920_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 362.0
SYD3_k127_2686920_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000004836 212.0
SYD3_k127_2686920_6 GHMP kinases C terminal K07031 - 2.7.1.168 0.0000000000000000000000000000000000000000000000000004148 197.0
SYD3_k127_2686920_7 it plays a direct role in the translocation of protons across the membrane K02108 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000000000000003227 187.0
SYD3_k127_2686920_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000001064 74.0
SYD3_k127_2730494_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007835 445.0
SYD3_k127_2730494_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 379.0
SYD3_k127_2730494_10 Tetratricopeptide repeat - - - 0.00000001247 66.0
SYD3_k127_2730494_11 Peptidase M56 K03646 - - 0.0006157 51.0
SYD3_k127_2730494_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004262 332.0
SYD3_k127_2730494_3 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 319.0
SYD3_k127_2730494_4 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 312.0
SYD3_k127_2730494_5 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001119 281.0
SYD3_k127_2730494_6 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001088 260.0
SYD3_k127_2730494_7 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950,K09007,K13940,K17488 - 2.7.6.3,3.5.4.16,3.5.4.39,4.1.2.25 0.000000000000000000000000000324 122.0
SYD3_k127_2730494_8 Preprotein translocase subunit K03210 - - 0.0000000000000000001167 92.0
SYD3_k127_2730494_9 Protein of unknown function (FYDLN_acid) - - - 0.0000000000007038 72.0
SYD3_k127_2741415_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 6.004e-221 716.0
SYD3_k127_2741415_1 Aminotransferase K14267,K14287 - 2.6.1.17,2.6.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 480.0
SYD3_k127_2741415_10 DinB family - - - 0.0008 48.0
SYD3_k127_2741415_2 Cys/Met metabolism PLP-dependent enzyme K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 415.0
SYD3_k127_2741415_3 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 385.0
SYD3_k127_2741415_4 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 329.0
SYD3_k127_2741415_5 Conserved hypothetical protein (DUF2461) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005883 255.0
SYD3_k127_2741415_6 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002096 276.0
SYD3_k127_2741415_7 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 GO:0005575,GO:0005576 - 0.000000000000000000000000000000000000000002032 162.0
SYD3_k127_2741415_8 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000001203 115.0
SYD3_k127_2741415_9 - - - - 0.000000000000007556 78.0
SYD3_k127_2748344_1 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000103 257.0
SYD3_k127_2748344_2 - - - - 0.0000000000000000000000000000000000000007767 161.0
SYD3_k127_2748344_3 - - - - 0.0000000000000009991 89.0
SYD3_k127_2748344_4 YceI-like domain - - - 0.000000000000001009 85.0
SYD3_k127_2773687_0 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 340.0
SYD3_k127_2773687_1 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 323.0
SYD3_k127_2773687_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003233 316.0
SYD3_k127_2773687_3 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 300.0
SYD3_k127_2773687_4 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000001157 231.0
SYD3_k127_2773687_5 PAP2 superfamily - - - 0.000000000000000000000000000000000000002011 160.0
SYD3_k127_2773687_6 Sporulation related domain K03749 - - 0.000005815 59.0
SYD3_k127_2839516_0 ATP-dependent helicase activity K10844 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 413.0
SYD3_k127_2839516_1 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.0000000000272 68.0
SYD3_k127_2839516_2 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.00003435 52.0
SYD3_k127_2839516_3 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064,K07065 GO:0006417,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0040008,GO:0045926,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:2000112,GO:2000113 - 0.00009244 50.0
SYD3_k127_287702_0 mRNA catabolic process K18682 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007399 551.0
SYD3_k127_287702_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 509.0
SYD3_k127_287702_2 YmdB-like protein K09769 - - 0.000000000000000000004925 104.0
SYD3_k127_287702_3 carboxylic ester hydrolase activity - - - 0.000000000002706 78.0
SYD3_k127_287702_4 Cell division protein ZapA K09888 - - 0.0000000000103 69.0
SYD3_k127_2932824_0 Succinyl-CoA ligase like flavodoxin domain - - - 4.069e-259 826.0
SYD3_k127_2932824_1 Cation transporter/ATPase, N-terminus K01531,K12955 - 3.6.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009258 359.0
SYD3_k127_2932824_10 Heavy-metal resistance - - - 0.0000000757 64.0
SYD3_k127_2932824_2 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 370.0
SYD3_k127_2932824_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000001044 222.0
SYD3_k127_2932824_4 ribonuclease activity - - - 0.0000000000000000000000000000000000000005207 156.0
SYD3_k127_2932824_5 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000009181 126.0
SYD3_k127_2932824_6 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.00000000000000000000003276 107.0
SYD3_k127_2932824_7 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000004278 98.0
SYD3_k127_2932824_8 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000003253 94.0
SYD3_k127_2932824_9 Bacterial PH domain K08981 - - 0.00000000000000002749 90.0
SYD3_k127_2952996_0 Amino acid permease - - - 7.957e-216 689.0
SYD3_k127_2952996_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 492.0
SYD3_k127_2952996_10 Transglycosylase SLT domain - - - 0.000000000000000000000000000000002341 139.0
SYD3_k127_2952996_11 nucleotidyltransferase activity K17882 - - 0.000000000000000000000000000000005627 133.0
SYD3_k127_2952996_12 tetratricopeptide repeat - - - 0.000000000000000003077 99.0
SYD3_k127_2952996_13 - K03646 - - 0.0000000000006871 80.0
SYD3_k127_2952996_14 - - - - 0.0000000000093 78.0
SYD3_k127_2952996_15 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 0.000000005031 60.0
SYD3_k127_2952996_16 Putative cyclase - - - 0.000000006951 56.0
SYD3_k127_2952996_2 Belongs to the thiolase family K00626,K07508 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008723 424.0
SYD3_k127_2952996_3 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 392.0
SYD3_k127_2952996_4 3-hydroxyacyl-CoA dehydrogenase domain protein K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002215 378.0
SYD3_k127_2952996_5 TIGRFAM Tyrosine recombinase XerD K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 291.0
SYD3_k127_2952996_6 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000006195 264.0
SYD3_k127_2952996_7 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000001063 250.0
SYD3_k127_2952996_8 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000001802 217.0
SYD3_k127_2952996_9 Hepn domain protein - - - 0.0000000000000000000000000000000000000000001583 161.0
SYD3_k127_3024614_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008676 451.0
SYD3_k127_3024614_1 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008491 387.0
SYD3_k127_3024614_2 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005849 334.0
SYD3_k127_3024614_3 Putative modulator of DNA gyrase K03568 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000006712 134.0
SYD3_k127_3024614_4 Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 - - 0.0000000000000000000000009278 120.0
SYD3_k127_3024614_5 PFAM peptidase U62 modulator of DNA gyrase K03568 - - 0.000000000002974 79.0
SYD3_k127_3024614_6 - - - - 0.00000001702 68.0
SYD3_k127_3024614_7 Tetratricopeptide repeat - - - 0.0000002364 63.0
SYD3_k127_3024614_8 Protein of unknown function (DUF507) K09804 - - 0.00007821 51.0
SYD3_k127_3030924_0 radical SAM domain protein K04070 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005772 365.0
SYD3_k127_3030924_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006068 348.0
SYD3_k127_3030924_2 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000001478 251.0
SYD3_k127_3030924_3 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000001129 211.0
SYD3_k127_3030924_5 Methyltransferase type 11 Methyltransferase type 12 - - - 0.00000000000000002021 92.0
SYD3_k127_3030924_6 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000002315 76.0
SYD3_k127_3030924_7 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 - 2.3.1.61 0.0000000008418 59.0
SYD3_k127_3030924_8 TIGRFAM TonB family K03832 - - 0.00000003122 66.0
SYD3_k127_3053497_0 AAA ATPase domain - - - 9.192e-312 1021.0
SYD3_k127_3053497_1 gluconolactonase activity K01053 - 3.1.1.17 1.983e-201 640.0
SYD3_k127_3053497_11 exo-alpha-(2->6)-sialidase activity - - - 0.0000000001874 73.0
SYD3_k127_3053497_2 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 542.0
SYD3_k127_3053497_3 transcription factor binding K15836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008741 407.0
SYD3_k127_3053497_4 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008834 263.0
SYD3_k127_3053497_5 Cupin 2, conserved barrel domain protein K11477 - - 0.000000000000000000000000000000000000000000000000000000000005917 212.0
SYD3_k127_3053497_6 - - - - 0.000000000000000000000000000000000000000000000000000000001833 211.0
SYD3_k127_3053497_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000001954 211.0
SYD3_k127_3053497_8 Haem-degrading - - - 0.000000000000000000000000000000000000000000005784 174.0
SYD3_k127_3053497_9 Cupin 2, conserved barrel domain protein K11477 - - 0.000000000000000000000000000000000000000001444 168.0
SYD3_k127_309546_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.618e-264 842.0
SYD3_k127_309546_1 Transglycosylase K05366 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0008955,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042546,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 522.0
SYD3_k127_309546_10 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000001155 153.0
SYD3_k127_309546_11 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000136 138.0
SYD3_k127_309546_12 Could be involved in septation K06412 - - 0.000000000000000000000000000003326 125.0
SYD3_k127_309546_13 bacterial (prokaryotic) histone like domain K03530 - - 0.00000000000000000000000000009549 117.0
SYD3_k127_309546_14 ADP binding - - - 0.0000000000000000000000000005937 123.0
SYD3_k127_309546_15 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000000002169 108.0
SYD3_k127_309546_16 heat shock protein binding - - - 0.00000000000000000000003144 114.0
SYD3_k127_309546_17 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000002292 82.0
SYD3_k127_309546_18 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000003136 81.0
SYD3_k127_309546_19 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K01256,K02563,K02652,K08776,K12132 - 2.4.1.227,2.7.11.1,3.4.11.2 0.000000000004022 77.0
SYD3_k127_309546_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 484.0
SYD3_k127_309546_20 Transposase K07491 - - 0.0000000003893 72.0
SYD3_k127_309546_21 Type II secretion system (T2SS), protein E, N-terminal domain K02243,K02652 - - 0.0000005486 57.0
SYD3_k127_309546_22 Predicted membrane protein (DUF2232) - - - 0.000007799 57.0
SYD3_k127_309546_23 COG1943 Transposase and inactivated derivatives K07491 - - 0.0005208 49.0
SYD3_k127_309546_3 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 400.0
SYD3_k127_309546_4 Peptidase M50 - - - 0.00000000000000000000000000000000000000000000000000000001312 208.0
SYD3_k127_309546_5 COG1943 Transposase and inactivated derivatives K07491 - - 0.000000000000000000000000000000000000000000000000000001583 198.0
SYD3_k127_309546_6 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000001906 170.0
SYD3_k127_309546_7 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000007161 172.0
SYD3_k127_309546_8 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000007324 168.0
SYD3_k127_309546_9 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0040007,GO:0044237,GO:0050515 2.7.1.148 0.0000000000000000000000000000000000004535 151.0
SYD3_k127_3121355_0 protein secretion by the type I secretion system K11085 - - 2.076e-201 646.0
SYD3_k127_3121355_1 Belongs to the BI1 family K06890,K19416 - - 0.000000000000000000000000000000000000000000000000000000000000001063 226.0
SYD3_k127_3121355_2 peptidoglycan-binding protein - - - 0.000000000000000000000000000000000000000000000006482 179.0
SYD3_k127_3121355_3 photosynthesis - - - 0.000000000000000000000000000000000000000000009152 167.0
SYD3_k127_3121355_4 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.0000000000000000000000000001298 124.0
SYD3_k127_3121355_5 Helix-turn-helix domain - - - 0.0000000000003479 83.0
SYD3_k127_3121355_6 Transcriptional regulator - - - 0.00001145 50.0
SYD3_k127_3165642_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 428.0
SYD3_k127_3165642_1 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000001759 243.0
SYD3_k127_3165642_2 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000000000000000003308 160.0
SYD3_k127_3165642_3 TIGRFAM Addiction module toxin, RelE StbE K06218 - - 0.0000000000000000000000191 105.0
SYD3_k127_3165642_4 Putative restriction endonuclease - - - 0.00000000000000000000002858 106.0
SYD3_k127_3165642_5 PFAM Bacterial regulatory protein, arsR family - - - 0.0000000000000002846 81.0
SYD3_k127_3165642_6 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02806 - - 0.0000000002154 70.0
SYD3_k127_3165642_7 TraY domain K18918 - - 0.000001674 59.0
SYD3_k127_325132_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 4.601e-208 666.0
SYD3_k127_325132_1 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000005638 256.0
SYD3_k127_325132_2 HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000009982 218.0
SYD3_k127_325132_3 D,D-heptose 1,7-bisphosphate phosphatase K02841,K02843,K02849,K03271,K03272,K03273 - 2.7.1.167,2.7.7.70,3.1.3.82,3.1.3.83,5.3.1.28 0.0000000000000000000000000000000000000000000000000000007995 205.0
SYD3_k127_325132_4 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000000008849 179.0
SYD3_k127_325132_5 lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000006083 185.0
SYD3_k127_325132_6 PFAM glycosyl transferase family 9 K02841 - - 0.00000000000000000000000000000000001089 149.0
SYD3_k127_325132_7 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000001056 119.0
SYD3_k127_325132_8 Protein of unknown function (DUF3108) - - - 0.00000000000000000002542 101.0
SYD3_k127_3285439_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 1.767e-280 894.0
SYD3_k127_3285439_1 Carboxyl transferase domain K01969 - 6.4.1.4 3.786e-244 772.0
SYD3_k127_3285439_10 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000002085 153.0
SYD3_k127_3285439_11 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000006242 145.0
SYD3_k127_3285439_12 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.0000000000000000005553 100.0
SYD3_k127_3285439_13 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000002288 78.0
SYD3_k127_3285439_14 cell adhesion - - - 0.000000000000005302 83.0
SYD3_k127_3285439_15 Biotin carboxylase C-terminal domain K01968 - 6.4.1.4 0.000000000000006391 89.0
SYD3_k127_3285439_17 ComEC Rec2-related protein K02238 - - 0.00004514 55.0
SYD3_k127_3285439_18 Late embryogenesis abundant protein - - - 0.0007342 50.0
SYD3_k127_3285439_2 CoA carboxylase activity K01968 - 6.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 475.0
SYD3_k127_3285439_3 PFAM pyruvate carboxyltransferase K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006101 351.0
SYD3_k127_3285439_4 Glucose / Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004004 336.0
SYD3_k127_3285439_5 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008335 282.0
SYD3_k127_3285439_6 Lactonase, 7-bladed beta-propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002086 270.0
SYD3_k127_3285439_7 Enoyl-CoA hydratase K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000397 257.0
SYD3_k127_3285439_8 B12 binding domain K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000006162 204.0
SYD3_k127_3285439_9 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.00000000000000000000000000000000000005339 154.0
SYD3_k127_3315220_0 Insulinase (Peptidase family M16) K07263 - - 0.0 1259.0
SYD3_k127_3315220_1 PFAM flavin reductase domain protein, FMN-binding - - - 0.00000000000000000000000000000000000000000000005349 173.0
SYD3_k127_3315220_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000008939 122.0
SYD3_k127_3315220_3 - - - - 0.00000000000000000000000007752 119.0
SYD3_k127_3315220_4 An anti-sigma factor for extracytoplasmic function (ECF) sigma factor SigK. ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut extracytoplasmically (site-1 protease, S1P), then within the membrane itself (site-2 protease, S2P, Rip1), while cytoplasmic proteases finish degrading the regulatory protein, liberating the sigma factor - - - 0.000558 50.0
SYD3_k127_3331316_0 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 522.0
SYD3_k127_3331316_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 422.0
SYD3_k127_3331316_10 lyase activity K03301 - - 0.00000000000111 82.0
SYD3_k127_3331316_2 Belongs to the formate--tetrahydrofolate ligase family K01938 GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 399.0
SYD3_k127_3331316_4 Oxidoreductase molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005331 261.0
SYD3_k127_3331316_5 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000008492 157.0
SYD3_k127_3331316_6 type II and III secretion system protein K02507,K02666 - - 0.00000000000000000000000000853 128.0
SYD3_k127_3331316_7 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000001207 122.0
SYD3_k127_3331316_8 cyclic nucleotide-binding - - - 0.00000000000002868 83.0
SYD3_k127_3331316_9 DNA-templated transcription, termination K02600,K02945 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0043244,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000008541 77.0
SYD3_k127_3384462_0 X-Pro dipeptidyl-peptidase (S15 family) - - - 4.77e-234 745.0
SYD3_k127_3384462_1 Bacterial periplasmic substrate-binding proteins K02029,K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 587.0
SYD3_k127_3384462_2 Peptidase family S58 K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 458.0
SYD3_k127_3384462_3 TIGRFAM zinc-binding alcohol dehydrogenase family protein K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005708 331.0
SYD3_k127_3384462_4 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003554 273.0
SYD3_k127_3384462_5 AAA domain, putative AbiEii toxin, Type IV TA system K02028 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000009819 272.0
SYD3_k127_3384462_6 PFAM Phosphomethylpyrimidine kinase type-1 K00868,K00941,K14153 - 2.5.1.3,2.7.1.35,2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000002443 221.0
SYD3_k127_3384462_7 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000223 183.0
SYD3_k127_3384462_8 Protein of unknown function (DUF962) - - - 0.00000000000000000000166 101.0
SYD3_k127_3473695_0 Phospholipase D. Active site motifs. K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 429.0
SYD3_k127_3473695_1 Phospholipase D Transphosphatidylase K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 362.0
SYD3_k127_3473695_2 DNA polymerase III subunit epsilon K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000243 239.0
SYD3_k127_3473695_3 homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 0.000000000000000000000000000000000000000000000000002742 189.0
SYD3_k127_3473695_4 WYL domain K13572 - - 0.00000000000000000000000000000000000000000001086 175.0
SYD3_k127_3473695_5 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000004887 123.0
SYD3_k127_3473695_6 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000009179 76.0
SYD3_k127_3489406_0 sequence-specific DNA binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005804 376.0
SYD3_k127_3489406_1 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 294.0
SYD3_k127_3489406_2 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004625 281.0
SYD3_k127_3489406_3 Permease family K06901 - - 0.00000000000000000000000000000000000000000000000000000000000000000002362 239.0
SYD3_k127_3489406_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000003255 243.0
SYD3_k127_3489406_5 - - - - 0.00000000000000000000000000000000000000000002494 178.0
SYD3_k127_3489406_6 mRNA binding - - - 0.0000000000000000000000000001052 115.0
SYD3_k127_3489406_7 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.000000000000000000007099 93.0
SYD3_k127_3532776_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 617.0
SYD3_k127_3532776_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 297.0
SYD3_k127_3532776_2 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.00000000000000000000002812 108.0
SYD3_k127_3532776_3 R3H domain protein K06346 - - 0.0000000000000004474 89.0
SYD3_k127_3550605_0 xanthine dehydrogenase activity K04108 - 1.3.7.9 3.468e-300 941.0
SYD3_k127_3550605_1 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618 315.0
SYD3_k127_3550605_10 RNA recognition motif - - - 0.0000000000000000000000003727 117.0
SYD3_k127_3550605_11 - - - - 0.0000000000005682 83.0
SYD3_k127_3550605_12 chlorophyll binding - - - 0.000000002026 69.0
SYD3_k127_3550605_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 306.0
SYD3_k127_3550605_3 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 299.0
SYD3_k127_3550605_4 PFAM Collagen-binding surface protein Cna-like, B-type domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000055 283.0
SYD3_k127_3550605_5 Ferritin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003382 256.0
SYD3_k127_3550605_6 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000008305 233.0
SYD3_k127_3550605_7 Forkhead associated domain - - - 0.000000000000000000000000000000000000000000002075 176.0
SYD3_k127_3550605_8 - - - - 0.000000000000000000000000000000000000000006587 166.0
SYD3_k127_3550605_9 PFAM ABC-2 type transporter K01992,K09690 - - 0.0000000000000000000000000000000000000000312 162.0
SYD3_k127_3566018_0 Glutamate synthase central domain K00265,K00284 GO:0003674,GO:0003824,GO:0004355,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019676,GO:0019740,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045181,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1 0.0 1301.0
SYD3_k127_3566018_1 Binding-protein-dependent transport system inner membrane component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003158 388.0
SYD3_k127_3566018_2 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000269 248.0
SYD3_k127_3566018_3 DNA-binding transcription factor activity - - - 0.000000000000000000000000000000000000000551 160.0
SYD3_k127_3566018_4 Catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate K00116,K15736 - 1.1.5.4 0.00000000000000000000000004109 112.0
SYD3_k127_3566854_0 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 327.0
SYD3_k127_3566854_1 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.000000000000254 84.0
SYD3_k127_3643175_0 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005829 423.0
SYD3_k127_3643175_1 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006173 320.0
SYD3_k127_3645266_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 9.407e-317 1008.0
SYD3_k127_3645266_1 amino acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 395.0
SYD3_k127_3645266_2 aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000147 254.0
SYD3_k127_3645266_3 PFAM Polynucleotide adenylyltransferase region K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000004925 198.0
SYD3_k127_3645266_4 gluconolactonase activity - - - 0.0000415 51.0
SYD3_k127_3670575_0 Fumarase C-terminus K01676 - 4.2.1.2 3.06e-217 683.0
SYD3_k127_3670575_1 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 351.0
SYD3_k127_3670575_2 Adenylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000005016 236.0
SYD3_k127_3670575_3 Tetratricopeptide repeats - - - 0.0000000000000000000000000000000000000000000000000000000001992 234.0
SYD3_k127_3670575_4 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000002143 156.0
SYD3_k127_3683971_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 3.745e-229 734.0
SYD3_k127_3683971_1 recA bacterial DNA recombination protein K03553 GO:0000150,GO:0000166,GO:0000287,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009432,GO:0009605,GO:0009628,GO:0009650,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030145,GO:0030554,GO:0031668,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042148,GO:0042221,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046677,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007202 478.0
SYD3_k127_3683971_10 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000153 283.0
SYD3_k127_3683971_11 SMART protein phosphatase 2C domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007794 274.0
SYD3_k127_3683971_12 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000003074 238.0
SYD3_k127_3683971_13 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000005836 232.0
SYD3_k127_3683971_14 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000006148 202.0
SYD3_k127_3683971_15 Cell wall formation K00075 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008762,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0055114,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 1.3.1.98 0.0000000000000000000000000000000000000000000000000000001067 213.0
SYD3_k127_3683971_16 Mannose-6-phosphate isomerase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000001576 205.0
SYD3_k127_3683971_17 glycosyl hydrolase, BNR repeat-containing protein - - - 0.0000000000000000000000000000000000000000000003309 182.0
SYD3_k127_3683971_18 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.000000000000000000000000000000001319 135.0
SYD3_k127_3683971_19 cheY-homologous receiver domain - - - 0.00000000000000000000000000000007057 132.0
SYD3_k127_3683971_2 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 481.0
SYD3_k127_3683971_20 Domain of unknown function (DUF3488) K22452 - 2.3.2.13 0.000000000000000000000000003227 129.0
SYD3_k127_3683971_21 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000002771 109.0
SYD3_k127_3683971_22 Protein of unknown function DUF58 - - - 0.0000000000000000000002705 109.0
SYD3_k127_3683971_23 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.000000000000000000007964 101.0
SYD3_k127_3683971_24 Phosphatidylglycerophosphatase A K01095 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008962,GO:0009058,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016021,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0030258,GO:0031224,GO:0031226,GO:0032026,GO:0042221,GO:0042577,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0046839,GO:0050896,GO:0071704,GO:0071944,GO:0090407,GO:1901576 3.1.3.27 0.00000000000000001415 96.0
SYD3_k127_3683971_25 Belongs to the sulfur carrier protein TusA family K04085 - - 0.00000000000000006903 85.0
SYD3_k127_3683971_26 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117,K03646 - - 0.0000000000000004267 82.0
SYD3_k127_3683971_27 SMART Rhodanese domain protein - - - 0.0000000007944 60.0
SYD3_k127_3683971_28 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0007727 50.0
SYD3_k127_3683971_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 376.0
SYD3_k127_3683971_4 Bacterial sugar transferase K03606 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 335.0
SYD3_k127_3683971_5 SIS domain K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008517 331.0
SYD3_k127_3683971_6 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 319.0
SYD3_k127_3683971_7 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007454 332.0
SYD3_k127_3683971_8 SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008394 306.0
SYD3_k127_3683971_9 DAHP synthetase I family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 301.0
SYD3_k127_3813909_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1042.0
SYD3_k127_3813909_1 PIN domain - - - 0.0000000000000000000000000000000000000000000472 167.0
SYD3_k127_3813909_2 Magnesium chelatase, subunit ChlI C-terminal K06400,K07391 - - 0.0000000000001908 75.0
SYD3_k127_3813909_3 positive regulation of growth K01081 - 3.1.3.5 0.000000000001469 74.0
SYD3_k127_3860830_0 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000917 535.0
SYD3_k127_3860830_1 PFAM Type II secretion system F domain K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007957 449.0
SYD3_k127_3860830_2 response regulator K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 452.0
SYD3_k127_3860830_3 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000325 266.0
SYD3_k127_3860830_4 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000002155 121.0
SYD3_k127_3896502_0 AMP-binding enzyme K01897 - 6.2.1.3 4.777e-289 910.0
SYD3_k127_3896502_1 Periplasmic binding protein K01999 - - 4.481e-199 631.0
SYD3_k127_3896502_10 ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 396.0
SYD3_k127_3896502_11 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 390.0
SYD3_k127_3896502_12 transport system, ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004577 345.0
SYD3_k127_3896502_13 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004691 321.0
SYD3_k127_3896502_14 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000008592 244.0
SYD3_k127_3896502_15 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000004503 241.0
SYD3_k127_3896502_16 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000001595 219.0
SYD3_k127_3896502_17 transport system, permease component K01992 - - 0.000000000000000000000000000000000000000000000000000000000006682 220.0
SYD3_k127_3896502_18 amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000006524 211.0
SYD3_k127_3896502_19 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000001518 196.0
SYD3_k127_3896502_2 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 594.0
SYD3_k127_3896502_20 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.000000000000000000000000000000000000000000000000008477 191.0
SYD3_k127_3896502_21 PFAM PIN domain - - - 0.000000000000000000000000000000000000000000001911 167.0
SYD3_k127_3896502_22 glycosyl hydrolase, BNR repeat-containing protein - - - 0.00000000000000000000000000000000002167 151.0
SYD3_k127_3896502_23 PFAM Histidine triad (HIT) protein K02503 - - 0.0000000000000000000000000000005016 141.0
SYD3_k127_3896502_24 50S ribosomal protein L31 K02909 - - 0.000000000000000000000000005248 114.0
SYD3_k127_3896502_25 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.00000000000000000000000007722 113.0
SYD3_k127_3896502_26 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.0000000000000000000000004963 118.0
SYD3_k127_3896502_27 Bacterial antitoxin of type II TA system, VapB - - - 0.0000000000000000006473 88.0
SYD3_k127_3896502_28 Protein of unknown function (DUF1059) - - - 0.00000000000005211 74.0
SYD3_k127_3896502_29 DNA polymerase III (delta' subunit) K02340 - 2.7.7.7 0.00000000006738 75.0
SYD3_k127_3896502_3 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008509 510.0
SYD3_k127_3896502_30 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.00002511 55.0
SYD3_k127_3896502_4 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007634 499.0
SYD3_k127_3896502_5 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 457.0
SYD3_k127_3896502_6 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 439.0
SYD3_k127_3896502_7 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006782 432.0
SYD3_k127_3896502_8 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 440.0
SYD3_k127_3896502_9 amino acid transport system, ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 418.0
SYD3_k127_3905208_0 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 297.0
SYD3_k127_3905208_1 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.000000000000000000000000000000000000008679 153.0
SYD3_k127_3905208_2 protein histidine kinase activity K06375 - - 0.0000000000000000003611 96.0
SYD3_k127_3905208_3 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.0000001576 56.0
SYD3_k127_3905208_4 mechanosensitive ion channel - - - 0.000002056 57.0
SYD3_k127_392626_0 ligase activity, forming nitrogen-metal bonds K02230 - 6.6.1.2 0.0 1403.0
SYD3_k127_392626_1 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008893 534.0
SYD3_k127_392626_2 transcription factor binding K15836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000494 493.0
SYD3_k127_392626_3 Oxidoreductase molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 318.0
SYD3_k127_392626_4 Cytochrome b/b6/petB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003876 298.0
SYD3_k127_392626_5 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000263 198.0
SYD3_k127_392626_6 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.000000000000000000000000000000000000000000000000004738 194.0
SYD3_k127_3937361_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006378 456.0
SYD3_k127_3937361_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 386.0
SYD3_k127_3937361_2 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000003056 206.0
SYD3_k127_3937361_3 Ribosomal_S15 K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000003099 123.0
SYD3_k127_3937361_4 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000005705 103.0
SYD3_k127_3937361_5 Protein of unknown function (DUF503) K09764 - - 0.00000000000001258 78.0
SYD3_k127_3948062_0 cellulose binding - - - 5.966e-296 930.0
SYD3_k127_3948062_1 2-phosphosulpholactate phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001922 239.0
SYD3_k127_3948062_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K06996 - - 0.000000000000000000000000000000000000000000000001959 180.0
SYD3_k127_3999401_0 Poly A polymerase head domain K00970,K00974 - 2.7.7.19,2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003536 319.0
SYD3_k127_3999401_1 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006616 243.0
SYD3_k127_3999401_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000002253 139.0
SYD3_k127_4005295_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 514.0
SYD3_k127_4005295_1 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000005686 205.0
SYD3_k127_4005295_2 Glycosyl transferase family 2 - - - 0.0000000000000000000000000002223 126.0
SYD3_k127_4005295_3 ADP binding - - - 0.00002632 56.0
SYD3_k127_4068376_0 Belongs to the aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 547.0
SYD3_k127_4068376_1 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007395 438.0
SYD3_k127_4068376_2 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 364.0
SYD3_k127_4068376_3 methyltransferase activity - - - 0.000000000000000000000000004941 116.0
SYD3_k127_4068500_0 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008423 327.0
SYD3_k127_4068500_1 PFAM Peptidase family M20 M25 M40 K01436 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000612 329.0
SYD3_k127_4068500_10 - - - - 0.0000000000000000007363 98.0
SYD3_k127_4068500_11 Transcriptional regulator PadR-like family - - - 0.0000000000000001263 86.0
SYD3_k127_4068500_12 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000002073 80.0
SYD3_k127_4068500_13 - - - - 0.0000008539 55.0
SYD3_k127_4068500_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 326.0
SYD3_k127_4068500_3 amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005432 287.0
SYD3_k127_4068500_4 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004426 249.0
SYD3_k127_4068500_5 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000006141 265.0
SYD3_k127_4068500_6 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000001118 266.0
SYD3_k127_4068500_7 XdhC Rossmann domain K07402 - - 0.00000000000000000000000000000007593 138.0
SYD3_k127_4068500_8 Sodium:solute symporter family K03307 - - 0.000000000000000000000000000274 130.0
SYD3_k127_4068500_9 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000001928 94.0
SYD3_k127_411226_0 Uncharacterized membrane protein (DUF2298) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003527 633.0
SYD3_k127_411226_1 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000002161 235.0
SYD3_k127_411226_2 PFAM glycosyl transferase family 39 - - - 0.000000000000000000000000000000000000000003137 166.0
SYD3_k127_411226_3 cellulase activity K01218,K12132 - 2.7.11.1,3.2.1.78 0.000000000000000000000000000000001437 153.0
SYD3_k127_4195616_0 SAICAR synthetase K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004858 357.0
SYD3_k127_4195616_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004628 321.0
SYD3_k127_4195616_2 maltose O-acetyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000001324 245.0
SYD3_k127_4195616_3 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000001419 231.0
SYD3_k127_4195616_4 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000001389 186.0
SYD3_k127_4195616_5 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000002743 133.0
SYD3_k127_4195616_6 DNA polymerase III subunit delta K02341 - 2.7.7.7 0.00000000000000000000005961 114.0
SYD3_k127_4195616_7 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000007208 85.0
SYD3_k127_4195616_8 PFAM PEGA domain - - - 0.0000001829 55.0
SYD3_k127_4195616_9 Sortase family K07284 - 3.4.22.70 0.000001771 59.0
SYD3_k127_4252841_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006101 482.0
SYD3_k127_4252841_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000805 325.0
SYD3_k127_4252841_10 Protein of unknown function (DUF1326) - - - 0.000000294 55.0
SYD3_k127_4252841_11 SprT homologues. - - - 0.0005671 49.0
SYD3_k127_4252841_2 PFAM peptidase S58 DmpA K01266 - 3.4.11.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000002402 269.0
SYD3_k127_4252841_3 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000003735 237.0
SYD3_k127_4252841_4 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000003492 204.0
SYD3_k127_4252841_5 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000005735 197.0
SYD3_k127_4252841_6 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000000000000000000000000000000000000000000002937 191.0
SYD3_k127_4252841_7 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000001403 134.0
SYD3_k127_4252841_8 peptidyl-tyrosine sulfation - - - 0.000000000005927 74.0
SYD3_k127_4252841_9 CoA-transferase family III K07749 - 2.8.3.16 0.0000000002233 61.0
SYD3_k127_4274377_0 Spermine/spermidine synthase domain - - - 5.809e-300 958.0
SYD3_k127_4274377_1 peptidase K01415,K07386 - 3.4.24.71 7.337e-300 938.0
SYD3_k127_4274377_2 glutamate-cysteine ligase activity K06048 GO:0003674,GO:0003824,GO:0016874,GO:0016879 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 508.0
SYD3_k127_4274377_3 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004492 406.0
SYD3_k127_4274377_4 aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006131 372.0
SYD3_k127_4274377_5 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006936 295.0
SYD3_k127_4274377_6 Domain of unknown function (DUF3943) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008652 258.0
SYD3_k127_4274377_7 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000004576 207.0
SYD3_k127_4274377_8 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000343 154.0
SYD3_k127_4274377_9 Sporulation and spore germination - - - 0.0000000000004039 78.0
SYD3_k127_4323290_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.747e-254 799.0
SYD3_k127_4323290_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 1.003e-201 655.0
SYD3_k127_4323290_10 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000005123 65.0
SYD3_k127_4323290_11 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040008,GO:0044464,GO:0045926,GO:0048519,GO:0050789,GO:0065007,GO:0071944 - 0.00001355 51.0
SYD3_k127_4323290_2 PFAM Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006679 487.0
SYD3_k127_4323290_3 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000983 309.0
SYD3_k127_4323290_4 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.000000000000000000000000000000000000000000000000000000000000000000000001539 258.0
SYD3_k127_4323290_5 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.00000000000000000000000000000000000000000000000000000002126 218.0
SYD3_k127_4323290_6 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000001572 184.0
SYD3_k127_4323290_7 DinB family - - - 0.000000000000000000000000000000003575 135.0
SYD3_k127_4323290_8 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07025 - - 0.00000000000000000000000000003341 134.0
SYD3_k127_4323290_9 PFAM YbbR family protein - - - 0.00000000000000000000005692 109.0
SYD3_k127_4340642_0 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008314 363.0
SYD3_k127_4340642_1 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002374 286.0
SYD3_k127_4340642_2 - - - - 0.000001468 55.0
SYD3_k127_4340642_3 His Kinase A (phosphoacceptor) domain K07768 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009405,GO:0009987,GO:0016020,GO:0016310,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0044464,GO:0046777,GO:0051704,GO:0071704,GO:0071944,GO:1901564 2.7.13.3 0.000003435 58.0
SYD3_k127_4391035_0 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005234 283.0
SYD3_k127_4391035_1 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000341 269.0
SYD3_k127_4391035_2 sequence-specific DNA binding K03719 - - 0.000000000000000000000000000000000000000000000000005105 188.0
SYD3_k127_4391035_3 DinB family - - - 0.00000000000000000000000000000457 135.0
SYD3_k127_4391035_4 PFAM Glucose Sorbosone dehydrogenase - - - 0.0000000000000000003247 93.0
SYD3_k127_4422982_0 POT family K03305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 547.0
SYD3_k127_4422982_1 intramolecular transferase activity, transferring amino groups K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 490.0
SYD3_k127_4422982_10 PFAM Cytochrome C assembly protein - - - 0.00000000000000000000006027 108.0
SYD3_k127_4422982_11 Uroporphyrin-III C tetrapyrrole (Corrin Porphyrin) methyltransferase K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.0000000009287 70.0
SYD3_k127_4422982_2 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 436.0
SYD3_k127_4422982_3 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 439.0
SYD3_k127_4422982_4 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 322.0
SYD3_k127_4422982_5 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000006539 289.0
SYD3_k127_4422982_6 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0040007,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000005334 250.0
SYD3_k127_4422982_7 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000004704 162.0
SYD3_k127_4422982_8 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000002281 128.0
SYD3_k127_4422982_9 Kunitz/Bovine pancreatic trypsin inhibitor domain K16628 GO:0001704,GO:0001706,GO:0003674,GO:0005198,GO:0005201,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005581,GO:0005590,GO:0005604,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005793,GO:0005798,GO:0006810,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006996,GO:0007275,GO:0007369,GO:0007492,GO:0008150,GO:0008544,GO:0009653,GO:0009790,GO:0009888,GO:0009987,GO:0012505,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0022607,GO:0030020,GO:0030134,GO:0030135,GO:0030154,GO:0030198,GO:0030934,GO:0031012,GO:0031090,GO:0031410,GO:0031974,GO:0031982,GO:0032501,GO:0032502,GO:0032991,GO:0033116,GO:0035987,GO:0042802,GO:0043062,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044420,GO:0044421,GO:0044422,GO:0044424,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046907,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048598,GO:0048646,GO:0048856,GO:0048869,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0061024,GO:0062023,GO:0065003,GO:0070013,GO:0071840,GO:0090114,GO:0097708,GO:0098588,GO:0098644,GO:0098648,GO:0098652,GO:0099080 - 0.00000000000000000000001489 115.0
SYD3_k127_4457994_0 Glyceraldehyde-3-phosphate dehydrogenase K00150 - 1.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000061 387.0
SYD3_k127_4457994_1 Aminotransferase K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005199 342.0
SYD3_k127_4457994_2 Sodium/calcium exchanger protein K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 331.0
SYD3_k127_4457994_3 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000128 263.0
SYD3_k127_4457994_4 AMMECR1 K09141 - - 0.0000000000000000000000000000000000000000000004394 178.0
SYD3_k127_4457994_5 - K07018 - - 0.00000000000000000000000000000000000000004918 171.0
SYD3_k127_4457994_6 PIN domain - - - 0.000000000000000000000000000000000008047 144.0
SYD3_k127_4457994_7 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.00000000000000000000000000000001983 138.0
SYD3_k127_4466660_0 Carboxypeptidase regulatory-like domain - - - 4.162e-236 752.0
SYD3_k127_4466660_1 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 602.0
SYD3_k127_4466660_10 - - - - 0.0000000000001445 71.0
SYD3_k127_4466660_11 OsmC-like protein - - - 0.000000000006948 73.0
SYD3_k127_4466660_12 Leucine carboxyl methyltransferase - - - 0.000000004402 59.0
SYD3_k127_4466660_2 Aldo Keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005939 390.0
SYD3_k127_4466660_3 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 365.0
SYD3_k127_4466660_4 alpha/beta hydrolase fold K07019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001648 268.0
SYD3_k127_4466660_5 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000009766 244.0
SYD3_k127_4466660_6 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000002158 146.0
SYD3_k127_4466660_7 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000001005 109.0
SYD3_k127_4466660_8 Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity - - - 0.0000000000000000000000003675 108.0
SYD3_k127_4466660_9 - - - - 0.0000000000000000000139 99.0
SYD3_k127_4504715_0 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 4.691e-206 659.0
SYD3_k127_4504715_1 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008521 526.0
SYD3_k127_4504715_2 quinone binding K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006002 345.0
SYD3_k127_4504715_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007675 314.0
SYD3_k127_4504715_4 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 0.0000000000000000000000000000000000000001136 164.0
SYD3_k127_4504715_5 PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000008927 97.0
SYD3_k127_4504715_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000005656 91.0
SYD3_k127_4509364_0 Peptidase S46 - - - 5.346e-206 662.0
SYD3_k127_4509364_1 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 385.0
SYD3_k127_4509364_2 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 314.0
SYD3_k127_4523392_0 Belongs to the RtcB family K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 607.0
SYD3_k127_4523392_1 PFAM Radical SAM K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 565.0
SYD3_k127_4523392_10 - - - - 0.00000000000000000000000000001799 121.0
SYD3_k127_4523392_11 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.0000000000000000000002763 102.0
SYD3_k127_4523392_12 bacterial OsmY and nodulation domain - - - 0.000000000000000000001214 101.0
SYD3_k127_4523392_13 IMP dehydrogenase activity - GO:0001666,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0008150,GO:0009605,GO:0009607,GO:0009628,GO:0016020,GO:0030312,GO:0035821,GO:0036293,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052564,GO:0052572,GO:0070482,GO:0071944,GO:0075136 - 0.0000000000001885 78.0
SYD3_k127_4523392_2 Phosphomethylpyrimidine kinase K16370 - 2.7.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004731 354.0
SYD3_k127_4523392_3 Aldo Keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007196 281.0
SYD3_k127_4523392_4 Nucleotidyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003312 273.0
SYD3_k127_4523392_6 DNA binding - - - 0.0000000000000000000000000000000000000000000000000000000000000006256 233.0
SYD3_k127_4523392_7 Alpha-amylase domain K01176 - 3.2.1.1 0.0000000000000000000000000000000000000004776 153.0
SYD3_k127_4523392_8 - - - - 0.000000000000000000000000000000000002981 145.0
SYD3_k127_4523392_9 Archease protein family (MTH1598/TM1083) - - - 0.000000000000000000000000000003742 125.0
SYD3_k127_4526101_0 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004668 450.0
SYD3_k127_4526101_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710,K12450 GO:0000166,GO:0000271,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005975,GO:0005976,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008460,GO:0009058,GO:0009059,GO:0009225,GO:0009226,GO:0009987,GO:0016051,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019305,GO:0019438,GO:0030312,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044464,GO:0045226,GO:0046379,GO:0046383,GO:0046483,GO:0048037,GO:0050662,GO:0051287,GO:0055086,GO:0070404,GO:0071704,GO:0071944,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 4.2.1.46,4.2.1.76 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 405.0
SYD3_k127_4526101_2 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000001523 233.0
SYD3_k127_4526101_3 UbiA prenyltransferase family K17105 - 2.5.1.42 0.000000000005515 79.0
SYD3_k127_4526101_4 Involved in the activation and reutilization of phytol from chlorophyll degradation in plant metabolism, including tocopherol biosynthesis. Catalyzes the conversion of phytol to phytol monophosphate (PMP) (By similarity) K18678 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006766,GO:0006775,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009507,GO:0009536,GO:0009987,GO:0010189,GO:0010276,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0042360,GO:0042362,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617 2.7.1.182 0.00001662 57.0
SYD3_k127_4526101_5 PFAM Organic solvent tolerance protein K04744 - - 0.00004823 55.0
SYD3_k127_4700172_0 Involved in the tonB-independent uptake of proteins - - - 2.095e-230 740.0
SYD3_k127_4700172_1 Peptidase family M13 K07386 - - 4.816e-225 720.0
SYD3_k127_4700172_2 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009781 298.0
SYD3_k127_4700172_3 PFAM Ribonuclease BN-like family K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000002668 243.0
SYD3_k127_4700172_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000004683 153.0
SYD3_k127_4700172_5 cell septum assembly - - - 0.0000000000000000000000000000000002493 149.0
SYD3_k127_4700172_6 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000001298 96.0
SYD3_k127_4700172_7 SMART Transport-associated and nodulation region K04065 - - 0.00000000004511 70.0
SYD3_k127_4707710_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 9.579e-214 687.0
SYD3_k127_4707710_1 Belongs to the PstS family K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 418.0
SYD3_k127_4707710_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 333.0
SYD3_k127_4707710_3 Phosphate transport system permease protein PstA K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001893 251.0
SYD3_k127_4707710_4 - - - - 0.0000000000000004177 91.0
SYD3_k127_4753504_0 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K13599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 473.0
SYD3_k127_4753504_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003508 338.0
SYD3_k127_4753504_2 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000007755 186.0
SYD3_k127_4753504_3 orotate phosphoribosyltransferase activity K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000007883 179.0
SYD3_k127_4753504_4 CoA binding domain K06929 - - 0.00000000000000000000000000000000141 134.0
SYD3_k127_4753504_5 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000001423 129.0
SYD3_k127_4997355_0 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 297.0
SYD3_k127_4997355_1 Bacterial sugar transferase K03606 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002434 268.0
SYD3_k127_4997355_2 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000003529 255.0
SYD3_k127_4997355_3 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000003159 219.0
SYD3_k127_5088985_0 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005539 452.0
SYD3_k127_5088985_1 - - - - 0.0000000000000000000000006413 121.0
SYD3_k127_51008_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 5.231e-260 835.0
SYD3_k127_51008_1 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 533.0
SYD3_k127_51008_10 Domain of unknown function (DUF4340) - - - 0.0000000000002504 83.0
SYD3_k127_51008_11 thioredoxin domain - - - 0.00000000001698 77.0
SYD3_k127_51008_12 O-Antigen ligase - - - 0.000001769 60.0
SYD3_k127_51008_13 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.000003158 55.0
SYD3_k127_51008_2 COG0464 ATPases of the AAA class - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009435 427.0
SYD3_k127_51008_3 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 303.0
SYD3_k127_51008_4 ABC-type uncharacterized transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000004178 258.0
SYD3_k127_51008_5 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000007101 179.0
SYD3_k127_51008_6 ATP-dependent protease La (LON) substrate-binding domain K01338,K07157 - 3.4.21.53 0.000000000000000000000000000127 124.0
SYD3_k127_51008_7 PFAM Pentapeptide repeats (8 copies) - - - 0.0000000000000000000000000006508 131.0
SYD3_k127_51008_8 4Fe-4S single cluster domain of Ferredoxin I - - - 0.00000000000000004842 81.0
SYD3_k127_51008_9 Low-complexity protein - - - 0.00000000000001354 88.0
SYD3_k127_5117739_0 Amidase K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 2.61e-201 641.0
SYD3_k127_5117739_1 Aldo/keto reductase family K05882 - 1.1.1.91 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009296 475.0
SYD3_k127_5117739_10 Cytochrome c K03889 - - 0.0000007121 62.0
SYD3_k127_5117739_11 PFAM magnesium chelatase ChlI subunit K07391 - - 0.00001084 52.0
SYD3_k127_5117739_12 toxin-antitoxin pair type II binding - - - 0.00004741 51.0
SYD3_k127_5117739_13 nuclease activity K18828 - - 0.00008839 55.0
SYD3_k127_5117739_14 - - - - 0.0009509 49.0
SYD3_k127_5117739_2 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 456.0
SYD3_k127_5117739_3 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000448 373.0
SYD3_k127_5117739_4 Mo-co oxidoreductase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000809 304.0
SYD3_k127_5117739_5 ribonuclease activity - - - 0.00000000000000000000000000000000000000000000000000001143 192.0
SYD3_k127_5117739_6 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.00000000000000000000000000000000000000000000000804 173.0
SYD3_k127_5117739_7 nuclease activity - - - 0.000000000000000000000002463 108.0
SYD3_k127_5117739_8 SpoVT AbrB like domain - - - 0.0000000000000000009777 87.0
SYD3_k127_5117739_9 - K18829 - - 0.0000000000179 68.0
SYD3_k127_5151586_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 2.591e-309 960.0
SYD3_k127_5151586_1 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006794 497.0
SYD3_k127_5151586_2 PFAM Rieske 2Fe-2S domain K02636,K03886 - 1.10.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004224 278.0
SYD3_k127_5151586_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000001464 156.0
SYD3_k127_5151586_4 Domain of unknown function (DUF1858) - - - 0.000000000000000000000000000000000001645 158.0
SYD3_k127_5151586_5 two component, sigma54 specific, transcriptional regulator, Fis family K07713,K07714 - - 0.00000000000000000000002233 104.0
SYD3_k127_5158612_0 Belongs to the peptidase M16 family K07263 - - 1.654e-262 839.0
SYD3_k127_5158612_1 Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 - 3.4.21.83 1.366e-251 795.0
SYD3_k127_5158612_2 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 282.0
SYD3_k127_5158612_3 Protein of unknown function (DUF4197) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003235 250.0
SYD3_k127_5158612_4 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000001544 221.0
SYD3_k127_5158612_5 Toxic component of a toxin-antitoxin (TA) module. An RNase K07065 - - 0.00000000000000000000000000000000000000009638 154.0
SYD3_k127_5246986_0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003099 529.0
SYD3_k127_5246986_1 AMP-binding enzyme C-terminal domain K18660,K18661 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 518.0
SYD3_k127_5246986_10 phosphoenolpyruvate-dependent sugar phosphotransferase system K02768,K02769,K02770,K02806 - 2.7.1.202 0.0000000000000000000000000000000000000000001345 168.0
SYD3_k127_5246986_11 Hydrogenase 4 membrane - - - 0.00000000000000000000000000000000000000001883 171.0
SYD3_k127_5246986_12 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000001198 129.0
SYD3_k127_5246986_13 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000001164 132.0
SYD3_k127_5246986_14 Putative restriction endonuclease - - - 0.000000000000000006792 96.0
SYD3_k127_5246986_15 C4-type zinc ribbon domain K07164 - - 0.00000005346 60.0
SYD3_k127_5246986_2 PFAM NADH Ubiquinone plastoquinone (complex I) K12137 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 516.0
SYD3_k127_5246986_3 plastoquinone (Complex I) K12141 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008287 413.0
SYD3_k127_5246986_4 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006376 344.0
SYD3_k127_5246986_5 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000275 329.0
SYD3_k127_5246986_6 Binding-protein-dependent transport system inner membrane component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004684 262.0
SYD3_k127_5246986_7 Binding-protein-dependent transport system inner membrane component K02025 - - 0.00000000000000000000000000000000000000000000000000000000000001189 228.0
SYD3_k127_5246986_8 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02806 - - 0.00000000000000000000000000000000000000000000000000000000001712 213.0
SYD3_k127_5246986_9 Tautomerase enzyme - - - 0.000000000000000000000000000000000000000000001659 169.0
SYD3_k127_5269404_0 adenylosuccinate lyase K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 493.0
SYD3_k127_5269404_1 Ornithine cyclodeaminase/mu-crystallin family K01750,K19244 - 1.4.1.1,4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 375.0
SYD3_k127_5269404_10 Putative addiction module component - - - 0.0000003612 55.0
SYD3_k127_5269404_2 Pyridoxal-phosphate dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 361.0
SYD3_k127_5269404_3 ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 340.0
SYD3_k127_5269404_4 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 326.0
SYD3_k127_5269404_5 RmuC family K09760 - - 0.000000000000000000000000000000000000000000001504 180.0
SYD3_k127_5269404_6 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000002478 145.0
SYD3_k127_5269404_7 - - - - 0.000000000000000000003318 100.0
SYD3_k127_5269404_8 Amidinotransferase K01478 - 3.5.3.6 0.000000000000000006066 86.0
SYD3_k127_5269404_9 Plasmid stabilization system - - - 0.00000000001914 68.0
SYD3_k127_5398536_0 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002029 269.0
SYD3_k127_5398536_1 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000001442 197.0
SYD3_k127_5398536_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.6.5.3 0.0000000000000000000000000000005242 126.0
SYD3_k127_5433616_0 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000001027 229.0
SYD3_k127_5433616_1 lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000008422 207.0
SYD3_k127_5433616_2 PFAM NUDIX hydrolase K03574 - 3.6.1.55 0.0000000000000000000000000000000000001281 147.0
SYD3_k127_5433616_3 Nacht domain - - - 0.0001627 48.0
SYD3_k127_5482633_0 Protein of unknown function (DUF3417) K00688 - 2.4.1.1 1.498e-194 645.0
SYD3_k127_5482633_1 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 547.0
SYD3_k127_5482633_2 Domain of unknown function (DUF3536) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 493.0
SYD3_k127_5482633_3 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 387.0
SYD3_k127_5482633_4 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009757 332.0
SYD3_k127_5482633_5 Belongs to the ATCase OTCase family K09065,K13043 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 305.0
SYD3_k127_5482633_6 Mo-molybdopterin cofactor biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 293.0
SYD3_k127_5482633_7 Catalyzes the NADPH-dependent reduction of LysW - aminoadipate 6-phosphate to yield LysW -aminoadipate 6- semialdehyde K05829 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005611 270.0
SYD3_k127_5504865_0 ABC transporter C-terminal domain K06158 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 436.0
SYD3_k127_5504865_1 Pyrimidine nucleoside phosphorylase C-terminal domain K00756 GO:0003674,GO:0003824,GO:0004645,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009032,GO:0016740,GO:0016757,GO:0016758,GO:0016763,GO:0044424,GO:0044444,GO:0044464 2.4.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 394.0
SYD3_k127_5504865_2 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000001578 212.0
SYD3_k127_5504865_3 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000435 181.0
SYD3_k127_5533811_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009711 564.0
SYD3_k127_5533811_1 S-adenosylmethionine synthetase, C-terminal domain K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000814 533.0
SYD3_k127_5533811_10 Permease, YjgP YjgQ - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 339.0
SYD3_k127_5533811_11 PFAM ABC transporter related K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004896 308.0
SYD3_k127_5533811_12 Cobyrinic acid ac-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008858 300.0
SYD3_k127_5533811_13 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008726 308.0
SYD3_k127_5533811_14 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003929 279.0
SYD3_k127_5533811_15 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000007719 254.0
SYD3_k127_5533811_16 chromosome segregation K03497 - - 0.00000000000000000000000000000000000000000000000000000000001426 216.0
SYD3_k127_5533811_17 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.000000000000000000000000000000000000000000000000000000004756 219.0
SYD3_k127_5533811_18 Bifunctional nuclease K08999 - - 0.00000000000000000000000000000000000000000000000002742 183.0
SYD3_k127_5533811_19 Guanylate kinase homologues. K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000001729 190.0
SYD3_k127_5533811_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005615 506.0
SYD3_k127_5533811_20 TIGR00255 family - - - 0.000000000000000000000000000000000000000000001833 183.0
SYD3_k127_5533811_21 Urate oxidase N-terminal - - - 0.00000000000000000000000000000000000000000007746 168.0
SYD3_k127_5533811_22 Mannose-6-phosphate isomerase - - - 0.00000000000000000000000000000006786 136.0
SYD3_k127_5533811_23 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.00000000000000000000000000001806 127.0
SYD3_k127_5533811_24 Belongs to the tRNA nucleotidyltransferase poly(A) polymerase family K00974 - 2.7.7.72 0.00000000000000000000000008174 117.0
SYD3_k127_5533811_25 PTS system fructose IIA component K02793 - 2.7.1.191 0.0000000000000000000000000944 111.0
SYD3_k127_5533811_26 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0016020,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0044424,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090563 - 0.00000000000000000000001325 107.0
SYD3_k127_5533811_27 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.000000000000000000008461 99.0
SYD3_k127_5533811_28 SMART phosphoesterase PA-phosphatase related - - - 0.00000000000000000001134 106.0
SYD3_k127_5533811_29 Phosphotransferase System K11189 - - 0.00000000000000000006668 100.0
SYD3_k127_5533811_3 Fumarase C C-terminus K01744 - 4.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 467.0
SYD3_k127_5533811_30 lipopolysaccharide transport K09774 - - 0.0000000000001133 85.0
SYD3_k127_5533811_4 PFAM ABC transporter K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 439.0
SYD3_k127_5533811_5 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 417.0
SYD3_k127_5533811_6 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 357.0
SYD3_k127_5533811_7 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 361.0
SYD3_k127_5533811_8 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 344.0
SYD3_k127_5533811_9 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 346.0
SYD3_k127_5538609_0 PFAM Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 603.0
SYD3_k127_5538609_1 Lipocalin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000113 287.0
SYD3_k127_5538609_2 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000002509 192.0
SYD3_k127_5538609_3 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K07025 - - 0.0000000000000000000000006002 109.0
SYD3_k127_5543619_0 PASTA domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 437.0
SYD3_k127_5543619_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 412.0
SYD3_k127_5543619_2 to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 405.0
SYD3_k127_5543619_3 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008551 293.0
SYD3_k127_5543619_4 Mur ligase family, catalytic domain K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000002987 286.0
SYD3_k127_5543619_5 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000002942 213.0
SYD3_k127_5543619_6 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000001659 152.0
SYD3_k127_5543619_7 SurA N-terminal domain K03771 - 5.2.1.8 0.00000000000000000000000000001045 130.0
SYD3_k127_5543619_8 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000001519 122.0
SYD3_k127_559952_0 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003602 447.0
SYD3_k127_559952_1 Phosphate transporter family K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008535 412.0
SYD3_k127_559952_2 Specifically methylates the cytosine at position 1962 (m5C1962) of 23S rRNA K06969 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 314.0
SYD3_k127_559952_3 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000001391 193.0
SYD3_k127_559952_4 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000000957 179.0
SYD3_k127_559952_5 Protein of unknown function, DUF547 - - - 0.0000000000000000000000000000000009503 149.0
SYD3_k127_559952_6 cheY-homologous receiver domain - - - 0.0000000000000000000000000000005046 128.0
SYD3_k127_559952_7 protein histidine kinase activity K02484,K07636,K07768 - 2.7.13.3 0.000000000000000000000007059 103.0
SYD3_k127_5613130_0 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000542 169.0
SYD3_k127_5613130_1 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000001046 115.0
SYD3_k127_5613130_2 Bacterial membrane protein, YfhO - - - 0.00000000000000000006643 104.0
SYD3_k127_5613130_3 Bacterial membrane protein, YfhO - - - 0.0000000000000009585 85.0
SYD3_k127_5613130_4 Bacterial membrane protein, YfhO - - - 0.00000000003344 77.0
SYD3_k127_5613130_5 Psort location CytoplasmicMembrane, score - - - 0.000002475 60.0
SYD3_k127_5613130_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00001341 53.0
SYD3_k127_5613130_7 Bacterial membrane protein, YfhO - - - 0.00003021 57.0
SYD3_k127_5634829_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 1.264e-234 732.0
SYD3_k127_5634829_1 Aminotransferase class-III K03918,K07250,K20428 - 2.6.1.19,2.6.1.22,2.6.1.33,2.6.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 616.0
SYD3_k127_5634829_10 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000001957 220.0
SYD3_k127_5634829_11 lysyltransferase activity K07027 - - 0.00000000000000000000000000000000000000000000000000000000002418 221.0
SYD3_k127_5634829_12 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon K00966,K05305,K16881 - 2.7.1.52,2.7.7.13,5.4.2.8 0.00000000000000000000000000000000000000000000000000002009 208.0
SYD3_k127_5634829_13 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01560,K07025,K20862 - 3.1.3.102,3.1.3.104,3.8.1.2 0.0000000000000000000000000000000000000000000000000005834 197.0
SYD3_k127_5634829_14 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01560,K07025,K20862 - 3.1.3.102,3.1.3.104,3.8.1.2 0.0000000000000000000000000000000000000000000000001951 193.0
SYD3_k127_5634829_15 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000003299 153.0
SYD3_k127_5634829_16 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K03802,K05844 - 6.3.2.29,6.3.2.30 0.0000000000000000000002039 103.0
SYD3_k127_5634829_17 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000001431 74.0
SYD3_k127_5634829_18 PFAM Outer membrane efflux protein - - - 0.00001165 58.0
SYD3_k127_5634829_2 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008018 579.0
SYD3_k127_5634829_3 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K00945,K02945,K03527 - 1.17.7.4,2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 381.0
SYD3_k127_5634829_4 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002009 306.0
SYD3_k127_5634829_5 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 311.0
SYD3_k127_5634829_6 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004721 269.0
SYD3_k127_5634829_7 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000000000000000000000000000000000000000000000000002338 236.0
SYD3_k127_5634829_8 lysyltransferase activity K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000007558 238.0
SYD3_k127_5634829_9 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K03802,K05844 - 6.3.2.29,6.3.2.30 0.00000000000000000000000000000000000000000000000000000000000002117 235.0
SYD3_k127_5693555_0 OPT oligopeptide transporter protein - - - 2.32e-321 1000.0
SYD3_k127_5693555_1 Transport of potassium into the cell K03549 - - 5.615e-218 696.0
SYD3_k127_5693555_10 PFAM HEPN domain - - - 0.000000000000000000000001728 108.0
SYD3_k127_5693555_11 DNA polymerase beta domain protein region - - - 0.000000000000000000006134 96.0
SYD3_k127_5693555_12 Mycolic acid cyclopropane synthetase - - - 0.00000000000000000003756 101.0
SYD3_k127_5693555_13 YD repeat - - - 0.000000005577 63.0
SYD3_k127_5693555_14 PFAM blue (type 1) copper domain protein - - - 0.00000007626 59.0
SYD3_k127_5693555_15 NHL repeat containing protein - - - 0.0006851 52.0
SYD3_k127_5693555_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 604.0
SYD3_k127_5693555_3 Domain of Unknown Function (DUF748) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004361 548.0
SYD3_k127_5693555_4 amino acid K03294,K13868 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002907 412.0
SYD3_k127_5693555_5 PFAM Rieske 2Fe-2S domain protein K00479,K00499 - 1.14.15.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 407.0
SYD3_k127_5693555_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000003007 231.0
SYD3_k127_5693555_7 lactoylglutathione lyase activity K11210,K21253,K21264,K21265 GO:0003674,GO:0003824,GO:0004364,GO:0008150,GO:0016740,GO:0016765,GO:0042221,GO:0046677,GO:0050896 2.5.1.18 0.000000000000000000000000000000000000000000009702 165.0
SYD3_k127_5693555_8 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K01147,K12573 - 3.1.13.1 0.000000000000000000000000000002826 122.0
SYD3_k127_5693555_9 - - - - 0.000000000000000000000000002253 124.0
SYD3_k127_569510_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006672 519.0
SYD3_k127_569510_1 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 440.0
SYD3_k127_569510_2 FAD dependent oxidoreductase K00109,K15736 - 1.1.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 365.0
SYD3_k127_569510_4 PFAM FAD linked oxidase domain protein K00104,K11472 GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009441,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0017144,GO:0019154,GO:0019752,GO:0032787,GO:0034308,GO:0034310,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046296,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575,GO:1901615,GO:1901616 1.1.3.15 0.0000000000000000000000000001365 122.0
SYD3_k127_569510_5 Protein of unknown function (DUF2892) - - - 0.00000000000000000000153 96.0
SYD3_k127_569510_6 DNA-templated transcription, initiation K03088 - - 0.00000000000000000003583 102.0
SYD3_k127_5718269_0 PFAM Papain family cysteine protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005049 312.0
SYD3_k127_5718269_1 Tetrapyrrole (Corrin/Porphyrin) Methylases - - - 0.000000000000000000000000000000000000000000000000000000000000000001271 247.0
SYD3_k127_5718269_2 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000001018 244.0
SYD3_k127_5718269_3 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.00000000000000000000000001124 123.0
SYD3_k127_5718269_4 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000006071 115.0
SYD3_k127_5718269_5 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000001499 106.0
SYD3_k127_5718269_6 Glutaredoxin-like domain (DUF836) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000005257 75.0
SYD3_k127_5718269_7 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000004838 70.0
SYD3_k127_5718269_8 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000001841 72.0
SYD3_k127_5718269_9 Adenylate cyclase - - - 0.0000003477 64.0
SYD3_k127_5794795_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1116.0
SYD3_k127_5794795_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00322 - 1.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005562 606.0
SYD3_k127_5794795_10 ATP dependent DNA ligase C terminal region K10747 GO:0000287,GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016874,GO:0016886,GO:0022616,GO:0030312,GO:0033554,GO:0034641,GO:0034645,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0140097,GO:1901360,GO:1901576 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000003489 220.0
SYD3_k127_5794795_11 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000008292 185.0
SYD3_k127_5794795_12 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000004344 129.0
SYD3_k127_5794795_13 - - - - 0.000000000000000000000001852 120.0
SYD3_k127_5794795_14 tetratricopeptide repeat - - - 0.0002375 53.0
SYD3_k127_5794795_2 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007567 503.0
SYD3_k127_5794795_3 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003255 408.0
SYD3_k127_5794795_4 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 398.0
SYD3_k127_5794795_5 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 385.0
SYD3_k127_5794795_6 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 354.0
SYD3_k127_5794795_7 Trypsin-like serine protease K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 316.0
SYD3_k127_5794795_8 Dihydrodipicolinate reductase, N-terminus K21672 - 1.4.1.12,1.4.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000001409 260.0
SYD3_k127_5794795_9 DNA ligase N terminus - - - 0.0000000000000000000000000000000000000000000000000000000000005059 226.0
SYD3_k127_5800171_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 8.912e-270 852.0
SYD3_k127_5800171_1 Elongation factor G, domain IV K02355 - - 7.844e-225 716.0
SYD3_k127_5800171_10 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 380.0
SYD3_k127_5800171_11 protein-disulfide reductase activity K04084,K06196 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 387.0
SYD3_k127_5800171_12 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 388.0
SYD3_k127_5800171_13 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005561 383.0
SYD3_k127_5800171_14 Glycogen debranching enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 320.0
SYD3_k127_5800171_15 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002864 322.0
SYD3_k127_5800171_16 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 314.0
SYD3_k127_5800171_17 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000002945 286.0
SYD3_k127_5800171_18 twitching motility protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001423 264.0
SYD3_k127_5800171_19 N-Acetylmuramoyl-L-alanine amidase K01448,K02172 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000004092 284.0
SYD3_k127_5800171_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 583.0
SYD3_k127_5800171_20 Creatinase/Prolidase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001722 251.0
SYD3_k127_5800171_21 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000007596 212.0
SYD3_k127_5800171_22 Represses a number of genes involved in the response to DNA damage (SOS response) K01356,K03503 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000008536 204.0
SYD3_k127_5800171_23 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057,K02564 - 3.1.1.31,3.5.99.6 0.0000000000000000000000000000000000000000000000000000002773 204.0
SYD3_k127_5800171_24 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000005189 185.0
SYD3_k127_5800171_25 peptide deformylase activity K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.00000000000000000000000000000000000003078 149.0
SYD3_k127_5800171_26 - - - - 0.0000000000000000000000000000000002674 134.0
SYD3_k127_5800171_27 Probable RNA and SrmB- binding site of polymerase A K00970 - 2.7.7.19 0.00000000000000000000000000000007367 139.0
SYD3_k127_5800171_28 oxidoreductase activity - - - 0.000000000000000000000000001042 131.0
SYD3_k127_5800171_29 - - - - 0.000000000000000000000000006359 128.0
SYD3_k127_5800171_3 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 538.0
SYD3_k127_5800171_30 - - - - 0.000000000000000001801 100.0
SYD3_k127_5800171_31 - - - - 0.00000000000000001064 91.0
SYD3_k127_5800171_32 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000001339 60.0
SYD3_k127_5800171_34 Protein of unknown function, DUF255 - - - 0.00003285 55.0
SYD3_k127_5800171_35 peptidyl-tyrosine sulfation - - - 0.00008391 54.0
SYD3_k127_5800171_36 Tetratricopeptide repeat - - - 0.0001118 54.0
SYD3_k127_5800171_37 Alpha/beta hydrolase family K06889 - - 0.0001409 46.0
SYD3_k127_5800171_4 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 495.0
SYD3_k127_5800171_5 Anion-transporting ATPase K01551 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 470.0
SYD3_k127_5800171_6 Anion-transporting ATPase K01551 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 462.0
SYD3_k127_5800171_7 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K01810,K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 457.0
SYD3_k127_5800171_8 carbon starvation protein CstA K06200 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 416.0
SYD3_k127_5800171_9 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008594 400.0
SYD3_k127_5926027_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 6.314e-237 760.0
SYD3_k127_5926027_10 - - - - 0.00002753 52.0
SYD3_k127_5926027_11 Plasmid stability protein K21495 - - 0.0006993 48.0
SYD3_k127_5926027_2 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 347.0
SYD3_k127_5926027_3 TIGRFAM DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000008127 236.0
SYD3_k127_5926027_4 Radical SAM superfamily - - - 0.00000000000000000000000000000000000003418 160.0
SYD3_k127_5926027_5 SPTR PilT protein domain protein - - - 0.000000000000000000000000452 109.0
SYD3_k127_5926027_7 Glycosyltransferase like family 2 - - - 0.000000000000002261 87.0
SYD3_k127_5926027_8 ubiE/COQ5 methyltransferase family K00568 - 2.1.1.222,2.1.1.64 0.000000000000003391 85.0
SYD3_k127_5950700_0 Belongs to the sirtuin family. Class K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001899 259.0
SYD3_k127_5950700_1 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001707 256.0
SYD3_k127_5950700_2 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000007039 205.0
SYD3_k127_5950700_3 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000007171 187.0
SYD3_k127_5950700_4 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000000000209 65.0
SYD3_k127_5950700_5 Biotin-lipoyl like K01993 - - 0.0000000001655 72.0
SYD3_k127_5950700_7 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 GO:0002252,GO:0002376,GO:0003674,GO:0003824,GO:0006464,GO:0006476,GO:0006807,GO:0006935,GO:0006950,GO:0006952,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018205,GO:0019213,GO:0019538,GO:0033558,GO:0034979,GO:0034983,GO:0035601,GO:0036048,GO:0036049,GO:0036055,GO:0036211,GO:0040011,GO:0042221,GO:0042330,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050896,GO:0051607,GO:0051704,GO:0051707,GO:0071704,GO:0098542,GO:0098732,GO:0140096,GO:1901564 - 0.000001234 53.0
SYD3_k127_5956312_0 glycosyl hydrolase, BNR repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009191 437.0
SYD3_k127_5956312_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008826 294.0
SYD3_k127_5970373_0 Sortilin, neurotensin receptor 3, - - - 0.0 1183.0
SYD3_k127_5970373_1 tRNA synthetases class I (K) K01870 - 6.1.1.5 6.219e-275 875.0
SYD3_k127_5970373_10 Polymer-forming cytoskeletal - - - 0.000000000000000001303 94.0
SYD3_k127_5970373_2 Belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 6.865e-209 670.0
SYD3_k127_5970373_3 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003831 284.0
SYD3_k127_5970373_4 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000003214 231.0
SYD3_k127_5970373_5 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000001209 217.0
SYD3_k127_5970373_6 Signal peptidase (SPase) II K03101 - 3.4.23.36 0.0000000000000000000000000000008876 136.0
SYD3_k127_5970373_7 nuclease activity - GO:0001666,GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016787,GO:0016788,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0034641,GO:0036293,GO:0040008,GO:0043170,GO:0043207,GO:0044237,GO:0044238,GO:0044403,GO:0044419,GO:0045926,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051701,GO:0051704,GO:0051707,GO:0060255,GO:0065007,GO:0070482,GO:0071704,GO:0075136,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:2000112,GO:2000113 - 0.00000000000000000000000000002192 123.0
SYD3_k127_5970373_8 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.000000000000000000000000003502 121.0
SYD3_k127_5970373_9 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000002711 106.0
SYD3_k127_6022514_0 Large extracellular alpha-helical protein - - - 0.0 2078.0
SYD3_k127_6022514_1 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003219 449.0
SYD3_k127_6022514_10 - - - - 0.000000000000000000000000000000000000000000114 183.0
SYD3_k127_6022514_11 Penicillinase repressor - - - 0.0000000000000000000000000000000000000005319 152.0
SYD3_k127_6022514_12 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000000000000005464 151.0
SYD3_k127_6022514_13 MgtC family K07507 - - 0.0000000000000000000000000000001647 132.0
SYD3_k127_6022514_14 ABC transporter permease K01992 - - 0.000000000000000000008752 96.0
SYD3_k127_6022514_15 Protein tyrosine kinase K12132 - 2.7.11.1 0.000004445 60.0
SYD3_k127_6022514_16 Tetratricopeptide repeat - - - 0.0006395 53.0
SYD3_k127_6022514_2 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 372.0
SYD3_k127_6022514_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 330.0
SYD3_k127_6022514_4 Allophanate hydrolase subunit 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007918 320.0
SYD3_k127_6022514_5 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 310.0
SYD3_k127_6022514_6 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006126 294.0
SYD3_k127_6022514_7 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001878 279.0
SYD3_k127_6022514_8 Belongs to the UPF0271 (lamB) family K07160 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002767 246.0
SYD3_k127_6022514_9 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000004535 253.0
SYD3_k127_6026005_0 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 8.987e-259 809.0
SYD3_k127_6026005_1 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 456.0
SYD3_k127_6026005_2 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 424.0
SYD3_k127_6026005_3 Putative serine dehydratase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 305.0
SYD3_k127_6026005_4 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000002294 210.0
SYD3_k127_6026005_6 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000001893 150.0
SYD3_k127_6026005_7 methyltransferase activity K13613,K15677 - - 0.0000002899 57.0
SYD3_k127_6032870_0 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000001595 246.0
SYD3_k127_6032870_1 DNA ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000002939 226.0
SYD3_k127_6032870_2 DNA polymerase LigD polymerase domain K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000124 216.0
SYD3_k127_6032870_3 - - - - 0.00000000000000000000000000000000002495 139.0
SYD3_k127_6032870_4 COGs COG2442 conserved - - - 0.0000000000000000000000000002137 118.0
SYD3_k127_6032870_5 Uncharacterized membrane protein (DUF2298) - - - 0.0000000000000003626 84.0
SYD3_k127_6032870_6 Mannosyltransferase (PIG-V) - - - 0.0000000000002796 77.0
SYD3_k127_6070945_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 539.0
SYD3_k127_6070945_1 AMP-binding enzyme K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 526.0
SYD3_k127_6070945_10 mRNA catabolic process K06950 - - 0.0001623 49.0
SYD3_k127_6070945_2 Enoyl-CoA hydratase isomerase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 526.0
SYD3_k127_6070945_3 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 441.0
SYD3_k127_6070945_4 Enoyl-(Acyl carrier protein) reductase K03793 - 1.5.1.33 0.000000000000000000000000000000000000000000000000000001198 201.0
SYD3_k127_6070945_5 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000001579 195.0
SYD3_k127_6070945_6 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000000000000000002212 184.0
SYD3_k127_6070945_7 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000007255 120.0
SYD3_k127_6070945_8 Large extracellular alpha-helical protein K02172,K06196 - - 0.0000522 58.0
SYD3_k127_6086275_0 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002908 259.0
SYD3_k127_6086275_1 - - - - 0.00000000000000000000000000000000003221 152.0
SYD3_k127_6086275_2 membrane protein, required for N-linked glycosylation K07151 GO:0003674,GO:0003824,GO:0008150,GO:0009987,GO:0016043,GO:0016740,GO:0016757,GO:0045229,GO:0045232,GO:0071840 2.4.99.18 0.00000000003951 76.0
SYD3_k127_6086275_3 Bacterial membrane protein, YfhO - - - 0.00000003533 63.0
SYD3_k127_6146125_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.227e-309 970.0
SYD3_k127_6146125_1 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 421.0
SYD3_k127_6146125_2 Acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000191 209.0
SYD3_k127_6146125_3 PFAM OsmC family protein - - - 0.0000000000000000000000000000000000000000000131 166.0
SYD3_k127_6146125_4 Phosphatidylglycerophosphate synthase - - - 0.0000000000000000000000000000000000001715 145.0
SYD3_k127_6146125_5 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000004139 117.0
SYD3_k127_6146125_6 - - - - 0.00000000000009099 80.0
SYD3_k127_6146125_7 YCII-related domain - - - 0.000000512 61.0
SYD3_k127_6153298_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 610.0
SYD3_k127_6153298_1 Fic/DOC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 451.0
SYD3_k127_6153298_10 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000003162 156.0
SYD3_k127_6153298_11 - - - - 0.0000000000000000000004243 101.0
SYD3_k127_6153298_13 Protein of unknown function (DUF1573) - - - 0.000000000000003907 87.0
SYD3_k127_6153298_14 Iron permease FTR1 family K07243 - - 0.000000000000118 85.0
SYD3_k127_6153298_15 - - - - 0.00003455 55.0
SYD3_k127_6153298_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003753 444.0
SYD3_k127_6153298_3 - K12065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005803 384.0
SYD3_k127_6153298_4 PFAM cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000001265 258.0
SYD3_k127_6153298_5 Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000001481 242.0
SYD3_k127_6153298_6 TonB-dependent Receptor Plug K16092 - - 0.00000000000000000000000000000000000000000000000000000000000002566 242.0
SYD3_k127_6153298_7 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000002424 198.0
SYD3_k127_6153298_8 PFAM 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 - - 0.00000000000000000000000000000000000000000008628 174.0
SYD3_k127_6153298_9 FMN binding K03612 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000008859 150.0
SYD3_k127_6182326_0 Protein kinase domain K12132 - 2.7.11.1 8.462e-270 861.0
SYD3_k127_6182326_1 Belongs to the glycosyl hydrolase 1 family K05350 - 3.2.1.21 2.683e-202 638.0
SYD3_k127_6182326_2 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004994 426.0
SYD3_k127_6182326_3 coagulation factor 5 8 type - - - 0.0000000000000000000000000000000000000000000000000000000263 202.0
SYD3_k127_6182326_4 PFAM Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000001778 211.0
SYD3_k127_6195473_0 Cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 481.0
SYD3_k127_6195473_1 Alpha/beta hydrolase family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003644 398.0
SYD3_k127_6195473_2 short-chain dehydrogenase K13774 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000227 276.0
SYD3_k127_6195473_3 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004012 252.0
SYD3_k127_6195473_4 Mechanosensitive ion channel K05802 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004639 256.0
SYD3_k127_6195473_5 NADPH-dependent F420 reductase K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000006163 205.0
SYD3_k127_6226093_0 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000006317 231.0
SYD3_k127_6226093_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000002061 222.0
SYD3_k127_6226093_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000004301 193.0
SYD3_k127_6226093_3 Toxic component of a toxin-antitoxin (TA) module. An RNase - GO:0005575,GO:0005576 - 0.000001376 57.0
SYD3_k127_6226093_4 toxin-antitoxin pair type II binding - - - 0.00004342 49.0
SYD3_k127_6233849_0 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 373.0
SYD3_k127_6233849_1 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 342.0
SYD3_k127_6233849_2 of the beta-lactamase K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000009464 179.0
SYD3_k127_6233849_3 HpcH/HpaI aldolase/citrate lyase family K02510 - 4.1.2.52 0.000000000000000000000000000000000000000003788 165.0
SYD3_k127_6233849_4 Secretin and TonB N terminus short domain K02666 - - 0.00000000000000000000004184 108.0
SYD3_k127_6233849_5 Protein of unknown function (DUF4230) - - - 0.0000000005123 68.0
SYD3_k127_6312162_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 593.0
SYD3_k127_6312162_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 357.0
SYD3_k127_6312162_2 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007747 306.0
SYD3_k127_6312162_3 A G-specific K03575 - - 0.000000000000000000000000000000000000000000000000000000000000003776 238.0
SYD3_k127_6312162_4 benzoyl-CoA oxygenase K15512 - 1.14.13.208 0.0000000000000000000000000000000000000000000000000000000001033 219.0
SYD3_k127_6312162_5 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000133 173.0
SYD3_k127_6312162_6 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000402 143.0
SYD3_k127_6312162_7 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000001747 107.0
SYD3_k127_6312162_8 Uncharacterised protein family (UPF0158) - - - 0.000001657 59.0
SYD3_k127_6312162_9 Carboxypeptidase regulatory-like domain K18235 - - 0.00001787 58.0
SYD3_k127_635956_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002787 634.0
SYD3_k127_635956_1 Putative zinc-binding metallo-peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005438 531.0
SYD3_k127_635956_10 PFAM 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000001436 100.0
SYD3_k127_635956_11 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 - - 0.00000000000000000003114 104.0
SYD3_k127_635956_12 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.0000000000000000169 94.0
SYD3_k127_635956_13 redox protein, regulator of disulfide bond formation - - - 0.000000001407 67.0
SYD3_k127_635956_14 Ferredoxin K01768,K04755,K11107 - 4.6.1.1 0.00000001712 61.0
SYD3_k127_635956_15 - - - - 0.00000001917 61.0
SYD3_k127_635956_2 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002787 512.0
SYD3_k127_635956_3 Organic Anion Transporter Polypeptide (OATP) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000096 454.0
SYD3_k127_635956_4 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 372.0
SYD3_k127_635956_5 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000001506 265.0
SYD3_k127_635956_6 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000006999 149.0
SYD3_k127_635956_7 HicA toxin of bacterial toxin-antitoxin, - - - 0.000000000000000000000000000002998 121.0
SYD3_k127_635956_8 Smr domain - - - 0.0000000000000000000001331 99.0
SYD3_k127_635956_9 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.0000000000000000000006961 96.0
SYD3_k127_6371118_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 517.0
SYD3_k127_6371118_1 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 364.0
SYD3_k127_6371118_10 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000001372 147.0
SYD3_k127_6371118_11 Dual specificity phosphatase, catalytic domain - - - 0.00000000000000000000000000000000000001441 154.0
SYD3_k127_6371118_12 Signal transduction histidine kinase, LytS K02478 - 2.7.13.3 0.00000000000000000000000000000000000009811 165.0
SYD3_k127_6371118_13 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.0000000000000000000000000000000000008119 143.0
SYD3_k127_6371118_14 enzyme binding K00567,K07443 - 2.1.1.63 0.00000000000000000000000000000007613 128.0
SYD3_k127_6371118_15 - - - - 0.0000000000000000000000000007204 118.0
SYD3_k127_6371118_16 - - - - 0.000000000000000000000008016 106.0
SYD3_k127_6371118_17 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000006971 97.0
SYD3_k127_6371118_18 Protein of unknown function, DUF481 K07283 - - 0.00000000000004081 82.0
SYD3_k127_6371118_19 YXWGXW repeat (2 copies) - - - 0.00000000005404 69.0
SYD3_k127_6371118_2 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003169 322.0
SYD3_k127_6371118_20 Protein of unknown function (DUF3761) - - - 0.000000003373 68.0
SYD3_k127_6371118_21 PFAM PemK-like protein K07171 - - 0.0009972 45.0
SYD3_k127_6371118_3 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000001378 265.0
SYD3_k127_6371118_4 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000002621 235.0
SYD3_k127_6371118_5 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000173 232.0
SYD3_k127_6371118_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.000000000000000000000000000000000000000000000000000000006428 202.0
SYD3_k127_6371118_7 Calcium/calmodulin dependent protein kinase II association domain - - - 0.00000000000000000000000000000000000000000002257 166.0
SYD3_k127_6371118_8 - - - - 0.00000000000000000000000000000000000000000005414 165.0
SYD3_k127_6371118_9 photosystem II stabilization K02237 - - 0.0000000000000000000000000000000000000000003587 172.0
SYD3_k127_6492737_0 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005542 318.0
SYD3_k127_6492737_1 PFAM Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 309.0
SYD3_k127_6492737_2 ABC transporter K05847 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000155 278.0
SYD3_k127_6492737_3 Tryptophan halogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005635 285.0
SYD3_k127_6492737_4 PFAM Binding-protein-dependent transport system inner membrane component K05846 - - 0.0000000000000000000000000000000000000000000000000000000000000001699 233.0
SYD3_k127_6492737_5 Chalcone isomerase-like - - - 0.0000000000000000000000000000000000000000000000000407 184.0
SYD3_k127_6492737_6 ATP-grasp domain K01921 - 6.3.2.4 0.00000000000000000000000000000000000000004974 153.0
SYD3_k127_6492737_7 Domain of unknown function (DUF4331) - - - 0.000000000000000000000000000000008121 133.0
SYD3_k127_6492737_8 Domain of unknown function (DUF4439) - - - 0.00000000000000000000000000277 123.0
SYD3_k127_6492737_9 - - - - 0.00000000000000003368 89.0
SYD3_k127_6567701_0 AcrB/AcrD/AcrF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 488.0
SYD3_k127_6567701_1 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004732 469.0
SYD3_k127_6567701_2 methylamine metabolic process K15977 - - 0.0000000000000000000000000000000000000000000000000004186 192.0
SYD3_k127_6567701_3 Pfam Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000008775 125.0
SYD3_k127_6567701_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.00000000000000000003367 102.0
SYD3_k127_6579285_0 Heat shock 70 kDa protein K04043 - - 1.465e-300 933.0
SYD3_k127_6579285_1 PFAM Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.000000000000000000000000000000000000000000000000009031 184.0
SYD3_k127_6579285_2 MerR HTH family regulatory protein K13640 - - 0.000000000000000000000000000008284 126.0
SYD3_k127_6579285_3 - - - - 0.000000000000000000000006933 117.0
SYD3_k127_6579285_4 Hsp20/alpha crystallin family K13993 - - 0.00000000000000000000001191 106.0
SYD3_k127_6579285_5 Peptidase M56, BlaR1 - - - 0.0000000000001952 83.0
SYD3_k127_6579285_6 Domain of unknown function (DUF4388) - - - 0.0000003237 63.0
SYD3_k127_6660181_0 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 510.0
SYD3_k127_6660181_1 PFAM Nucleotidyl transferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 376.0
SYD3_k127_6660181_2 Molybdenum cofactor synthesis domain K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000002952 246.0
SYD3_k127_6660181_3 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000001184 189.0
SYD3_k127_6660181_4 FAD binding domain - - - 0.00000000000000000000000000000000000000000006635 179.0
SYD3_k127_6660181_5 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.0000000000000000000000000000000000000000003993 177.0
SYD3_k127_6660181_6 Regulatory protein, FmdB - - - 0.00000000000000000002172 94.0
SYD3_k127_6660181_7 Methyltransferase domain - - - 0.00000000000000005215 89.0
SYD3_k127_6660181_8 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.000000002589 69.0
SYD3_k127_6660181_9 Domain of unknown function (DUF4388) - - - 0.00000002767 64.0
SYD3_k127_6719768_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 2.838e-265 841.0
SYD3_k127_6719768_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 369.0
SYD3_k127_6719768_10 Calcineurin-like phosphoesterase K03269 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0019897,GO:0019898,GO:0030145,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.54 0.00000000000000000000000000000000518 138.0
SYD3_k127_6719768_11 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000005816 90.0
SYD3_k127_6719768_12 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.0000000000000002606 93.0
SYD3_k127_6719768_13 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000001384 69.0
SYD3_k127_6719768_14 zinc metalloprotease - - - 0.0003624 53.0
SYD3_k127_6719768_2 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008357 359.0
SYD3_k127_6719768_3 two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003422 281.0
SYD3_k127_6719768_4 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000004987 236.0
SYD3_k127_6719768_5 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000101 193.0
SYD3_k127_6719768_6 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000002991 194.0
SYD3_k127_6719768_7 Subtilase family - - - 0.000000000000000000000000000000000000000004856 176.0
SYD3_k127_6719768_8 Transmembrane and - - - 0.00000000000000000000000000000000000001533 166.0
SYD3_k127_6719768_9 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase - - - 0.0000000000000000000000000000000002368 152.0
SYD3_k127_6805231_0 Protein of unknown function, DUF255 K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008594 552.0
SYD3_k127_6805231_1 PFAM Histone deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 325.0
SYD3_k127_6805231_2 LssY C-terminus - - - 0.000000000000000000000000000000000000000000000000000000000000003834 225.0
SYD3_k127_6812423_0 Dehydrogenase E1 component K11381 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 487.0
SYD3_k127_6812423_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000002522 210.0
SYD3_k127_6812423_2 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000007817 197.0
SYD3_k127_6812423_3 PFAM EAL domain - - - 0.000000000000000000000000000000000000000000000000000005681 210.0
SYD3_k127_6812423_4 PFAM response regulator receiver K07657 - - 0.000000000000000000000000003325 128.0
SYD3_k127_6812423_5 L,D-transpeptidase catalytic domain - - - 0.000000000001813 80.0
SYD3_k127_6812423_6 PFAM acylphosphatase K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.000000000002872 78.0
SYD3_k127_6812423_7 L,D-transpeptidase catalytic domain - - - 0.000000002898 67.0
SYD3_k127_6829656_0 response regulator - - - 7.251e-242 787.0
SYD3_k127_6829656_1 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 478.0
SYD3_k127_6829656_10 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.00000000000000000005573 94.0
SYD3_k127_6829656_11 - - - - 0.00000000002462 67.0
SYD3_k127_6829656_2 Binding-protein-dependent transport system inner membrane component K02011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 389.0
SYD3_k127_6829656_3 PFAM Glucose Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005323 372.0
SYD3_k127_6829656_4 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 314.0
SYD3_k127_6829656_5 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010,K11072 - 3.6.3.30,3.6.3.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 294.0
SYD3_k127_6829656_6 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor K10672,K10794 - 1.21.4.1,1.21.4.2 0.000000000000000000000000000000000000000000000000005368 186.0
SYD3_k127_6829656_7 COGs COG2905 signal-transduction protein containing cAMP-binding and CBS domains - - - 0.000000000000000000000000000000000000000000000133 172.0
SYD3_k127_6829656_8 Citrate transporter - - - 0.000000000000000000000000000000001194 144.0
SYD3_k127_6829656_9 Domain of unknown function (DUF4412) - - - 0.00000000000000000000000003354 122.0
SYD3_k127_6857899_0 CARDB domain-containing protein,subtilase family protease - - - 0.000000000000000000000003201 109.0
SYD3_k127_6857899_1 - - - - 0.0000001607 64.0
SYD3_k127_6868661_0 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 492.0
SYD3_k127_6868661_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000961 262.0
SYD3_k127_6868661_2 - - - - 0.000000000000000000000000000000000000000006654 160.0
SYD3_k127_6868661_3 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000000000000137 112.0
SYD3_k127_6868661_4 PFAM sodium K14445 - - 0.0000000000000000000000001677 120.0
SYD3_k127_6868661_5 Helix-turn-helix domain - - - 0.0000007985 54.0
SYD3_k127_6868986_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 1.367e-242 786.0
SYD3_k127_6868986_1 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 494.0
SYD3_k127_6868986_2 Dehydrogenase K00030,K00052 - 1.1.1.41,1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 411.0
SYD3_k127_6868986_3 alpha beta alpha domain I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009399 348.0
SYD3_k127_6868986_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000004647 170.0
SYD3_k127_6868986_5 COGs COG1253 Hemolysins and related protein containing CBS domains - - - 0.0000000000000000000000000000001662 128.0
SYD3_k127_6868986_6 Transglycosylase SLT domain - - - 0.000000000000000000000000000002337 135.0
SYD3_k127_6868986_7 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.00000000000000000000000000945 126.0
SYD3_k127_6868986_8 Modulates RecA activity K03565 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000003365 59.0
SYD3_k127_6961230_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 3.459e-241 756.0
SYD3_k127_6961230_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 437.0
SYD3_k127_6961230_10 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0032991,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051704,GO:0061077,GO:0101031,GO:1990220 - 0.000000000000000000000000000000000001257 141.0
SYD3_k127_6961230_11 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.00000000000000000000000000000002443 134.0
SYD3_k127_6961230_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 407.0
SYD3_k127_6961230_3 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006829 384.0
SYD3_k127_6961230_4 HD domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003421 274.0
SYD3_k127_6961230_5 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009776 262.0
SYD3_k127_6961230_6 Bacterial sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000679 231.0
SYD3_k127_6961230_7 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000004715 214.0
SYD3_k127_6961230_8 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000000000000000000006859 215.0
SYD3_k127_6961230_9 transferase activity, transferring glycosyl groups K21001 - - 0.00000000000000000000000000000000000000007097 168.0
SYD3_k127_6969953_0 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.0 1148.0
SYD3_k127_6969953_1 PFAM amidohydrolase K01464 - 3.5.2.2 2.72e-199 631.0
SYD3_k127_6969953_10 cheY-homologous receiver domain - - - 0.0000000000000000000000000000007747 137.0
SYD3_k127_6969953_11 Amidohydrolase family - - - 0.000000000000003509 83.0
SYD3_k127_6969953_2 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 578.0
SYD3_k127_6969953_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 586.0
SYD3_k127_6969953_4 Carbon-nitrogen hydrolase K01431,K12251 - 3.5.1.53,3.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 516.0
SYD3_k127_6969953_5 HsdM N-terminal domain K03427 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 485.0
SYD3_k127_6969953_6 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 444.0
SYD3_k127_6969953_7 Dihydroorotate dehydrogenase K17723 GO:0003674,GO:0003824,GO:0003954,GO:0006139,GO:0006206,GO:0006208,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016491,GO:0016651,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 1.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 396.0
SYD3_k127_6969953_8 deaminase K01485 - 3.5.4.1 0.0000000000000000000000000000000000000000000000000000000000000000005038 230.0
SYD3_k127_6969953_9 PFAM Alcohol dehydrogenase GroES-like domain K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000002083 241.0
SYD3_k127_7008582_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008478 409.0
SYD3_k127_7008582_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000001999 255.0
SYD3_k127_7008582_2 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000001032 236.0
SYD3_k127_7008582_3 PFAM Methionine sulfoxide reductase B K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000001104 233.0
SYD3_k127_7008582_4 PFAM CBS domain containing protein K04767 - - 0.000000000000000000000000000000000000000000000000000003418 197.0
SYD3_k127_7008582_5 AAA domain - - - 0.00000000000000000000000000000000000000197 153.0
SYD3_k127_7008582_6 COG1145 Ferredoxin - - - 0.00000000000000000000000119 114.0
SYD3_k127_7008582_7 Transcriptional regulator - - - 0.000000000000000001456 93.0
SYD3_k127_7097164_0 Radical SAM superfamily K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 496.0
SYD3_k127_7097164_1 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007891 468.0
SYD3_k127_7097164_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006924 387.0
SYD3_k127_7097164_3 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006188 291.0
SYD3_k127_7117354_0 YmdB-like protein K09769 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 299.0
SYD3_k127_7117354_1 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000001011 207.0
SYD3_k127_7117354_2 Redoxin K03564 - 1.11.1.15 0.00000000000000000000000000001303 120.0
SYD3_k127_7117354_3 transferase activity, transferring glycosyl groups K00754 - - 0.000000000000000001224 98.0
SYD3_k127_7117354_4 Redoxin K03564 - 1.11.1.15 0.0000000000003104 71.0
SYD3_k127_7117354_5 -O-antigen - - - 0.000000001389 68.0
SYD3_k127_7117354_6 Belongs to the UPF0434 family K09791 - - 0.000001267 53.0
SYD3_k127_7203344_0 Lipase maturation factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007712 485.0
SYD3_k127_7203344_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000002268 132.0
SYD3_k127_7203344_2 PIN domain - - - 0.0000005352 53.0
SYD3_k127_7203344_4 contains PIN domain - - - 0.0002483 50.0
SYD3_k127_7253732_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005888 457.0
SYD3_k127_7253732_1 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000006124 236.0
SYD3_k127_7253732_2 Amino-transferase class IV K00824,K00826 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009987,GO:0016053,GO:0016054,GO:0016740,GO:0016769,GO:0019478,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0046416,GO:0046437,GO:0047810,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 2.6.1.21,2.6.1.42 0.00000000000000000000000000000000000000000000000000000001169 204.0
SYD3_k127_7253732_3 HAMP domain K07651 - 2.7.13.3 0.00000000000000000000000000000000000000000000000006273 191.0
SYD3_k127_7253732_4 peptidase C26 K07010 - - 0.000000000000000000000000000000000000003728 156.0
SYD3_k127_7253732_5 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000879 111.0
SYD3_k127_7253732_6 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.000000000000000000002524 104.0
SYD3_k127_7340312_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006567 544.0
SYD3_k127_7340312_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 462.0
SYD3_k127_7340312_10 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000002147 226.0
SYD3_k127_7340312_11 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000000000000000000000000000000000000000000000117 228.0
SYD3_k127_7340312_12 - - - - 0.000000000000000000000000000000000000000000000000000002098 208.0
SYD3_k127_7340312_13 PFAM ABC transporter related K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000007055 192.0
SYD3_k127_7340312_14 AI-2E family transporter - - - 0.000000000000000000000000000000000002436 159.0
SYD3_k127_7340312_15 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000002898 138.0
SYD3_k127_7340312_16 Periplasmic binding protein K02016 - - 0.0000000000000000000000000019 125.0
SYD3_k127_7340312_17 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000002431 124.0
SYD3_k127_7340312_18 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000004545 101.0
SYD3_k127_7340312_19 chlorophyll binding - - - 0.00000000000000001469 97.0
SYD3_k127_7340312_2 Carboxyl transferase domain K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004036 363.0
SYD3_k127_7340312_20 PFAM plasmid stabilization system - - - 0.00000000000267 72.0
SYD3_k127_7340312_21 Putative addiction module component - - - 0.000000000105 71.0
SYD3_k127_7340312_22 Belongs to the 'phage' integrase family K03733 - - 0.000000004025 60.0
SYD3_k127_7340312_24 - - - - 0.000006783 58.0
SYD3_k127_7340312_3 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008981 338.0
SYD3_k127_7340312_4 Isoleucyl-tRNA synthetase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007713 337.0
SYD3_k127_7340312_5 Transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 300.0
SYD3_k127_7340312_6 PFAM Mur ligase family, glutamate ligase domain K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000001036 279.0
SYD3_k127_7340312_7 Belongs to the dGTPase family. Type 2 subfamily K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001661 278.0
SYD3_k127_7340312_8 Cell division ATP-binding protein ftsE K09811,K09812 GO:0000166,GO:0000287,GO:0000910,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0007049,GO:0008144,GO:0008150,GO:0008356,GO:0009898,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019897,GO:0019898,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0030145,GO:0030554,GO:0031234,GO:0032153,GO:0032506,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042173,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043937,GO:0043938,GO:0044085,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0046677,GO:0046872,GO:0046914,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051301,GO:0065007,GO:0070297,GO:0071840,GO:0071944,GO:0090529,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1902531 - 0.000000000000000000000000000000000000000000000000000000000000000000000004189 269.0
SYD3_k127_7340312_9 ribosome binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002977 263.0
SYD3_k127_7363758_0 glycosyl transferase family K00697 - 2.4.1.15,2.4.1.347 1.451e-215 675.0
SYD3_k127_7363758_1 Peptidase dimerisation domain K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 560.0
SYD3_k127_7363758_2 PFAM Major Facilitator Superfamily K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 319.0
SYD3_k127_7363758_3 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007596 293.0
SYD3_k127_7363758_4 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion K02564 - 3.5.99.6 0.0000000000000000000000000000000000000000000001132 187.0
SYD3_k127_7363758_5 BadF/BadG/BcrA/BcrD ATPase family - - - 0.0000000000000000000000000000000000000000000003568 184.0
SYD3_k127_7363758_6 Probably catalyzes the deacetylation of acetylated carbohydrates an important step in the degradation of oligosaccharides K03478 - 3.5.1.105 0.000000000000000000000000000000000000000000205 171.0
SYD3_k127_7363758_7 Chorismate mutase type I K00945,K06208 GO:0003674,GO:0003824,GO:0004106,GO:0006082,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044281,GO:0046417,GO:0071704 2.7.4.25,5.4.99.5 0.0000000000000000000000000000000003829 149.0
SYD3_k127_7363758_8 Prephenate dehydrogenase K15226 - 1.3.1.78 0.0000000000000000000000000001238 129.0
SYD3_k127_7487351_0 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006725 504.0
SYD3_k127_7487351_1 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007979 509.0
SYD3_k127_7487351_10 Thioredoxin - - - 0.0000002782 62.0
SYD3_k127_7487351_2 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004502 323.0
SYD3_k127_7487351_3 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000002404 218.0
SYD3_k127_7487351_4 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000007567 197.0
SYD3_k127_7487351_5 mRNA binding - - - 0.0000000000000000000000000000001148 125.0
SYD3_k127_7487351_6 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.00000000000000000000000000002011 118.0
SYD3_k127_7487351_7 DSBA-like thioredoxin domain - - - 0.000000000000000000002521 109.0
SYD3_k127_7487351_8 - K03646 - - 0.00000000000001644 87.0
SYD3_k127_7487351_9 Biotin-requiring enzyme - - - 0.0000000000009782 75.0
SYD3_k127_7487543_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005984 457.0
SYD3_k127_7487543_1 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 423.0
SYD3_k127_7487543_10 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000002906 154.0
SYD3_k127_7487543_11 Belongs to the ompA family - - - 0.000000000000000000000000002792 126.0
SYD3_k127_7487543_12 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 GO:0008150,GO:0040007 - 0.0000000000000000000000006948 110.0
SYD3_k127_7487543_13 Ribosomal protein S16 K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000005864 80.0
SYD3_k127_7487543_14 tRNA wobble adenosine to inosine editing - - - 0.000000001026 64.0
SYD3_k127_7487543_15 Belongs to the UPF0109 family K06960 GO:0008150,GO:0040007 - 0.000000003617 63.0
SYD3_k127_7487543_2 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003534 299.0
SYD3_k127_7487543_3 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000006417 243.0
SYD3_k127_7487543_4 Domain of unknown function (DUF1730) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000005701 244.0
SYD3_k127_7487543_5 permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000198 249.0
SYD3_k127_7487543_6 CBS domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000004079 226.0
SYD3_k127_7487543_7 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000008236 205.0
SYD3_k127_7487543_8 Methionine biosynthesis protein MetW K18827 - 2.1.1.294,2.7.1.181 0.0000000000000000000000000000000000000000003978 178.0
SYD3_k127_7487543_9 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000008944 158.0
SYD3_k127_7492129_0 helix_turn_helix gluconate operon transcriptional repressor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 366.0
SYD3_k127_7492129_1 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 331.0
SYD3_k127_7492129_2 copper resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000412 293.0
SYD3_k127_7492129_3 YbaK prolyl-tRNA synthetase associated region - - - 0.000000000000000000000000000000000001209 158.0
SYD3_k127_7572478_0 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 360.0
SYD3_k127_7572478_1 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000003656 184.0
SYD3_k127_7572478_2 STAS domain K04749 - - 0.000000000000000000000000000000009319 131.0
SYD3_k127_7572478_3 Zn peptidase - - - 0.0000000000000000000000000000001225 138.0
SYD3_k127_7572478_4 sigma factor antagonist activity K04757,K17752 - 2.7.11.1 0.000000000000000000000000002437 116.0
SYD3_k127_7572478_5 Glycosyl transferases group 1 - - - 0.000003884 52.0
SYD3_k127_7689051_0 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 349.0
SYD3_k127_7689051_1 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.000000003683 68.0
SYD3_k127_7836919_0 Belongs to the PEP-utilizing enzyme family K01007 - 2.7.9.2 0.0 1168.0
SYD3_k127_7836919_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00260,K00261,K00262 GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.2,1.4.1.3,1.4.1.4 3.656e-211 670.0
SYD3_k127_7836919_2 Insulinase (Peptidase family M16) K07263 - - 2.058e-202 640.0
SYD3_k127_7836919_3 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003879 591.0
SYD3_k127_7836919_4 Peptidase, M16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 450.0
SYD3_k127_7836919_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000004547 226.0
SYD3_k127_7867810_0 Elongation factor SelB winged helix 3 K03833 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 435.0
SYD3_k127_7867810_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000397 396.0
SYD3_k127_7867810_10 Probable zinc-ribbon domain - - - 0.000000000000000000000000000000004173 132.0
SYD3_k127_7867810_11 YqeY-like protein K09117 - - 0.0000000000000000000000000000228 123.0
SYD3_k127_7867810_12 CYTH K05873 - 4.6.1.1 0.00000000000000000000000000002571 130.0
SYD3_k127_7867810_13 Pyridoxal-phosphate dependent enzyme K01697 GO:0003674,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008144,GO:0016020,GO:0019842,GO:0030170,GO:0030312,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0071944,GO:0097159,GO:1901363 4.2.1.22 0.000000000000000008642 88.0
SYD3_k127_7867810_14 photosystem II stabilization K00703,K02237,K02238 - 2.4.1.21 0.00000000000000002591 88.0
SYD3_k127_7867810_2 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008532 355.0
SYD3_k127_7867810_3 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 293.0
SYD3_k127_7867810_4 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006284 282.0
SYD3_k127_7867810_5 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004138 273.0
SYD3_k127_7867810_6 Deoxynucleoside kinase K15518 - 2.7.1.113 0.0000000000000000000000000000000000000000000000000000000000000000009682 234.0
SYD3_k127_7867810_7 Methyltransferase small domain - - - 0.000000000000000000000000000000000000000003397 164.0
SYD3_k127_7867810_8 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000006678 149.0
SYD3_k127_7867810_9 PFAM Nucleotidyl transferase K00966 - 2.7.7.13 0.0000000000000000000000000000000003556 144.0
SYD3_k127_7903521_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003091 427.0
SYD3_k127_7903521_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 348.0
SYD3_k127_7903521_2 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000007112 198.0
SYD3_k127_7918528_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002836 469.0
SYD3_k127_7918528_1 Involved in the biosynthesis of porphyrin-containing compound K02495 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.98.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006013 455.0
SYD3_k127_7918528_10 - - - - 0.000000000000000000000000000000000000000000009668 172.0
SYD3_k127_7918528_11 Cytochrome c - - - 0.000000000000000000000000000000004886 136.0
SYD3_k127_7918528_12 amine dehydrogenase activity - - - 0.0000000000000000000000000000001122 137.0
SYD3_k127_7918528_13 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000009651 129.0
SYD3_k127_7918528_14 Chromate resistance exported protein - - - 0.00000000000000000000000000007044 123.0
SYD3_k127_7918528_15 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.00000000009285 64.0
SYD3_k127_7918528_2 PFAM ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008546 445.0
SYD3_k127_7918528_3 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 343.0
SYD3_k127_7918528_4 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008761 301.0
SYD3_k127_7918528_5 Chromate resistance exported protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001799 283.0
SYD3_k127_7918528_6 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000001736 268.0
SYD3_k127_7918528_7 Domain of Unknown Function (DUF1259) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003388 258.0
SYD3_k127_7918528_8 Cation efflux family K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000003569 242.0
SYD3_k127_7918528_9 Pyruvate phosphate dikinase - - - 0.000000000000000000000000000000000000000000000000006483 189.0
SYD3_k127_7967539_0 ATP-dependent helicase nuclease subunit A K16898 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 513.0
SYD3_k127_7967539_1 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 297.0
SYD3_k127_7967539_10 - - - - 0.00000000000000000000000000000004559 137.0
SYD3_k127_7967539_11 - - - - 0.000000000000000000000000000248 119.0
SYD3_k127_7967539_12 - - - - 0.0000000408 59.0
SYD3_k127_7967539_13 Plasmid stability protein K21495 - - 0.00002301 49.0
SYD3_k127_7967539_2 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006157 302.0
SYD3_k127_7967539_3 Pfam:Arch_ATPase K02450 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005488 278.0
SYD3_k127_7967539_4 - - - - 0.0000000000000000000000000000000000000000000000000003309 192.0
SYD3_k127_7967539_5 Chlorophyllase - - - 0.0000000000000000000000000000000000000000000006177 182.0
SYD3_k127_7967539_6 Uncharacterised protein family (UPF0158) - - - 0.000000000000000000000000000000000000000005495 160.0
SYD3_k127_7967539_7 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000000000000000000000000000009381 155.0
SYD3_k127_7967539_8 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000004405 151.0
SYD3_k127_7967539_9 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.000000000000000000000000000000000008915 141.0
SYD3_k127_8115525_0 intein-mediated protein splicing K00526,K01494,K02474,K13015,K14415,K21636 - 1.1.1.136,1.1.98.6,1.17.4.1,3.5.4.13,6.5.1.3 5.09e-221 719.0
SYD3_k127_8115525_1 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 439.0
SYD3_k127_8115525_2 Polysaccharide biosynthesis protein K01784,K02473 - 5.1.3.2,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 333.0
SYD3_k127_8115525_3 Glycosyl transferase, family 4 K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008041 298.0
SYD3_k127_8115525_4 ATPases associated with a variety of cellular activities K01990,K09689,K09691 - 3.6.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000005314 254.0
SYD3_k127_8115525_5 PFAM blue (type 1) copper domain protein - - - 0.0000000001122 70.0
SYD3_k127_8115525_6 ABC-2 type transporter K01992,K09690 - - 0.000000003827 59.0
SYD3_k127_8115525_7 Glycosyl transferase - - - 0.0006317 43.0
SYD3_k127_8152425_0 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004741 301.0
SYD3_k127_8152425_1 Surface antigen variable number - - - 0.0000000000000000000000000000000000000000000000000000000000000000005205 261.0
SYD3_k127_8152425_2 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000000000000000000000145 142.0
SYD3_k127_8152425_3 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) K06169 - - 0.000000000000000000000000000005473 121.0
SYD3_k127_8152425_4 Transposase K07483 - - 0.0001627 48.0
SYD3_k127_8152425_5 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0004424 45.0
SYD3_k127_8176119_0 OmpA family K02557,K03286 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007411 518.0
SYD3_k127_8176119_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 407.0
SYD3_k127_8176119_10 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000002146 104.0
SYD3_k127_8176119_11 Rv0623-like transcription factor K19687 - - 0.00000000000000000000003137 101.0
SYD3_k127_8176119_12 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000001751 92.0
SYD3_k127_8176119_13 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0000000000000004062 82.0
SYD3_k127_8176119_15 - - - - 0.0002641 50.0
SYD3_k127_8176119_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000246 334.0
SYD3_k127_8176119_3 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006539 322.0
SYD3_k127_8176119_4 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002519 257.0
SYD3_k127_8176119_5 TIGRFAM small GTP-binding protein domain K06883 - - 0.00000000000000000000000000000000000000000000000000000000007701 218.0
SYD3_k127_8176119_6 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000002443 166.0
SYD3_k127_8176119_7 Toxic component of a toxin-antitoxin (TA) module. An RNase K19686 - - 0.00000000000000000000000000000005411 133.0
SYD3_k127_8176119_8 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000004047 125.0
SYD3_k127_8176119_9 PFAM Lytic transglycosylase catalytic K08309 - - 0.00000000000000000000000000001429 137.0
SYD3_k127_8234235_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 9.206e-285 891.0
SYD3_k127_8234235_1 Major facilitator superfamily K03446 - - 9.464e-196 623.0
SYD3_k127_8234235_10 Transglutaminase-like superfamily - - - 0.00000000000000000000000000007302 124.0
SYD3_k127_8234235_11 Membrane domain of glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000001954 124.0
SYD3_k127_8234235_12 Enoyl-(Acyl carrier protein) reductase - - - 0.00002939 48.0
SYD3_k127_8234235_2 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 439.0
SYD3_k127_8234235_3 Catalyzes the conversion of dihydroorotate to orotate with NAD( ) as electron acceptor K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 319.0
SYD3_k127_8234235_4 Biotin-lipoyl like K03543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002544 267.0
SYD3_k127_8234235_5 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007361 257.0
SYD3_k127_8234235_6 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000697 250.0
SYD3_k127_8234235_7 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.000000000000000000000000000000000000000000000000000000001088 209.0
SYD3_k127_8234235_8 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000001606 194.0
SYD3_k127_8234235_9 Oxidoreductase NAD-binding domain K02823 - - 0.000000000000000000000000000000000000000002413 165.0
SYD3_k127_8257295_0 Phosphoesterase family - - - 6.447e-226 726.0
SYD3_k127_8257295_1 PIN domain - - - 0.00000000000000000000000000000000004971 138.0
SYD3_k127_8257295_2 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.00000000000000000000000000000005507 128.0
SYD3_k127_8257295_3 Peptidase, M16 K07263 - - 0.00000000000000000000003824 100.0
SYD3_k127_8257295_4 Methyladenine glycosylase - - - 0.0000000000000000005959 87.0
SYD3_k127_8257295_5 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0000000000000003127 86.0
SYD3_k127_8277997_0 Oligoendopeptidase f - - - 8.75e-268 841.0
SYD3_k127_8277997_1 pyrroloquinoline quinone binding - - - 1.193e-201 640.0
SYD3_k127_8277997_10 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 347.0
SYD3_k127_8277997_11 Alcohol dehydrogenase GroES-like domain K00001 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 331.0
SYD3_k127_8277997_12 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000001548 233.0
SYD3_k127_8277997_13 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000001622 223.0
SYD3_k127_8277997_14 InterPro IPR014922 - - - 0.0000000000000000000000000000000000000000000000000000002367 198.0
SYD3_k127_8277997_15 Esterase PHB depolymerase - - - 0.000000000000000000000000000000000000000000000000000003563 206.0
SYD3_k127_8277997_16 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000003065 188.0
SYD3_k127_8277997_17 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000002534 169.0
SYD3_k127_8277997_18 dihydrofolate reductase activity - - - 0.000000000000000000000000000000000000000000196 160.0
SYD3_k127_8277997_19 DNA-templated transcription, initiation K03088,K07263 - - 0.00000000000000000000000000000000000005874 159.0
SYD3_k127_8277997_2 Belongs to the citrate synthase family K01647 - 2.3.3.1 8.68e-200 634.0
SYD3_k127_8277997_21 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000001782 142.0
SYD3_k127_8277997_23 - - - - 0.000000000000000000000000000004183 126.0
SYD3_k127_8277997_24 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.000000000000001105 79.0
SYD3_k127_8277997_25 DNA-binding transcription factor activity K18996 - - 0.000000000004667 70.0
SYD3_k127_8277997_3 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008969 566.0
SYD3_k127_8277997_4 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005251 554.0
SYD3_k127_8277997_5 secondary active sulfate transmembrane transporter activity K06901 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 483.0
SYD3_k127_8277997_6 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 388.0
SYD3_k127_8277997_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002612 379.0
SYD3_k127_8277997_8 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 373.0
SYD3_k127_8277997_9 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 360.0
SYD3_k127_8306321_0 FAD linked oxidases, C-terminal domain K06911 - - 0.0 1211.0
SYD3_k127_8306321_1 aldehyde oxidase and xanthine dehydrogenase a b hammerhead K11177 - 1.17.1.4 0.0 1035.0
SYD3_k127_8306321_10 5-formyltetrahydrofolate cycloligase K01934 - 6.3.3.2 0.0000000000000000000000000000000000000000000000000000000000000000002927 235.0
SYD3_k127_8306321_11 cyclic nucleotide-binding - - - 0.000000000000000000000000000000000000000000000000000003486 198.0
SYD3_k127_8306321_12 - - - - 0.000000000000000000000000000000000000000001588 168.0
SYD3_k127_8306321_13 - - - - 0.0000000000000000000000000000000221 140.0
SYD3_k127_8306321_14 Domain of unknown function (DUF296) K06934 - - 0.000000000000000000000000000009654 138.0
SYD3_k127_8306321_15 - - - - 0.00004279 51.0
SYD3_k127_8306321_2 Domain of Unknown Function (DUF748) - - - 1.029e-211 704.0
SYD3_k127_8306321_3 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 507.0
SYD3_k127_8306321_4 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 416.0
SYD3_k127_8306321_5 Molybdopterin dehydrogenase K11178 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 410.0
SYD3_k127_8306321_6 Beta-lactamase class C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 289.0
SYD3_k127_8306321_7 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002828 248.0
SYD3_k127_8306321_8 Beta-lactamase class C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003957 240.0
SYD3_k127_8306321_9 2Fe-2S -binding K13483 - - 0.000000000000000000000000000000000000000000000000000000000000000000176 238.0
SYD3_k127_8321581_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 3.576e-251 805.0
SYD3_k127_8321581_1 regulation of DNA-templated transcription, elongation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 625.0
SYD3_k127_8321581_10 Cbs domain K04767 - - 0.00000000000000001695 89.0
SYD3_k127_8321581_11 COG0569 K transport systems, NAD-binding component K03499 - - 0.000002377 60.0
SYD3_k127_8321581_2 Phosphoribosyl synthetase-associated domain K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 354.0
SYD3_k127_8321581_3 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009037 305.0
SYD3_k127_8321581_4 carboxymethylenebutenolidase activity K01061,K07100 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001612 277.0
SYD3_k127_8321581_5 PFAM CBS domain containing protein K03281 - - 0.0000000000000000000000000000000000000000000000000000000009249 218.0
SYD3_k127_8321581_6 TIGRFAM Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000003948 216.0
SYD3_k127_8321581_7 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000000002894 207.0
SYD3_k127_8321581_8 response regulator K07782,K15852 - - 0.00000000000000000000000000007752 125.0
SYD3_k127_8321581_9 Periplasmic or secreted lipoprotein - - - 0.0000000000000000002429 96.0
SYD3_k127_833039_0 Carbamoyl-phosphate synthetase large chain domain protein K01955 - 6.3.5.5 0.0 1250.0
SYD3_k127_833039_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 464.0
SYD3_k127_833039_10 Glyoxalase-like domain K05606 - 5.1.99.1 0.000000000000000000000000000000000000000000772 160.0
SYD3_k127_833039_11 - - - - 0.0000000000000000000000000001445 121.0
SYD3_k127_833039_12 - - - - 0.00000000000002652 82.0
SYD3_k127_833039_2 NeuB family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 453.0
SYD3_k127_833039_3 Belongs to the CarA family K01955,K01956 GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0040007,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 402.0
SYD3_k127_833039_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 382.0
SYD3_k127_833039_5 LAO AO transport system K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 330.0
SYD3_k127_833039_6 Stage II sporulation protein K06381 - - 0.000000000000000000000000000000000000000000000000000001943 216.0
SYD3_k127_833039_7 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000004587 199.0
SYD3_k127_833039_8 IstB-like ATP binding protein K02315 - - 0.00000000000000000000000000000000000000000000000002139 188.0
SYD3_k127_833039_9 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.0000000000000000000000000000000000000000000005869 183.0
SYD3_k127_834571_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007437 388.0
SYD3_k127_834571_1 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000007426 241.0
SYD3_k127_834571_2 - - - - 0.00000000000000000000003286 116.0
SYD3_k127_834571_3 - - - - 0.000000000000000000001755 103.0
SYD3_k127_834571_4 Domain of unknown function (DUF4115) K15539 - - 0.00000000000000000003531 100.0
SYD3_k127_834571_5 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.000000000001256 74.0
SYD3_k127_8378344_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 4.715e-265 827.0
SYD3_k127_8378344_1 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 440.0
SYD3_k127_8378344_11 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0009916 48.0
SYD3_k127_8378344_2 gamma-glutamyltranspeptidase K00681 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006082,GO:0006508,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0019538,GO:0019752,GO:0030288,GO:0030313,GO:0031975,GO:0034722,GO:0036374,GO:0042597,GO:0043094,GO:0043102,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070011,GO:0071704,GO:0097264,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006772 397.0
SYD3_k127_8378344_3 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 358.0
SYD3_k127_8378344_4 Carbamoyltransferase N-terminus K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000044 288.0
SYD3_k127_8378344_5 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000001464 206.0
SYD3_k127_8378344_6 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000008672 193.0
SYD3_k127_8378344_7 peroxiredoxin activity - - - 0.000000000000000000000000000000000000000132 157.0
SYD3_k127_8378344_8 cell redox homeostasis - - - 0.00000000000000000000006232 106.0
SYD3_k127_8378344_9 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00002025 51.0
SYD3_k127_8424771_0 Adenosine/AMP deaminase K01488,K21053 - 3.5.4.2,3.5.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000603 451.0
SYD3_k127_8424771_1 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007701 375.0
SYD3_k127_8424771_10 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0000000000000001181 85.0
SYD3_k127_8424771_2 Permease family K06901 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 303.0
SYD3_k127_8424771_3 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001444 259.0
SYD3_k127_8424771_4 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000991 244.0
SYD3_k127_8424771_5 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000005621 218.0
SYD3_k127_8424771_6 Peptidase family M20/M25/M40 K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000003022 235.0
SYD3_k127_8424771_7 Prolyl oligopeptidase family K01061 - 3.1.1.45 0.0000000000000000000000000000000278 136.0
SYD3_k127_8424771_8 PIN domain - - - 0.00000000000000000000000000000004457 132.0
SYD3_k127_8424771_9 Belongs to the ATCase OTCase family K09065,K13043 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 0.0000000000000000001464 89.0
SYD3_k127_850332_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1116.0
SYD3_k127_850332_1 COG1104 Cysteine sulfinate desulfinase cysteine desulfurase K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008509 510.0
SYD3_k127_850332_2 Aminotransferase class-III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006375 297.0
SYD3_k127_850332_3 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.000000000000000000000000000000000000000000000000000000006667 219.0
SYD3_k127_850332_4 radical SAM domain protein - - - 0.0000000000000000000000000000000000003481 159.0
SYD3_k127_850332_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000005305 100.0
SYD3_k127_850332_6 Sulfurtransferase - - - 0.00000000000002926 85.0
SYD3_k127_850332_7 protein import - - - 0.0000003799 63.0
SYD3_k127_8561966_0 serine-type peptidase activity K01990,K08884,K12132,K18912 - 1.14.99.50,2.7.11.1 1.574e-274 875.0
SYD3_k127_8561966_1 peptidase activity, acting on L-amino acid peptides K07004,K09955 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007716 524.0
SYD3_k127_8561966_2 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003762 274.0
SYD3_k127_8561966_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000007286 243.0
SYD3_k127_8561966_4 LexA-binding, inner membrane-associated putative hydrolase - - - 0.0000000000000000000000000000000000000000003373 164.0
SYD3_k127_8561966_5 EVE domain - - - 0.000000000000000000000000000000000000004436 149.0
SYD3_k127_8561966_6 YCII-related domain - - - 0.0000000000000000000000000002802 119.0
SYD3_k127_8561966_7 - - - - 0.000000000000000001569 97.0
SYD3_k127_8561966_8 Protein of unknown function (DUF2911) - - - 0.000000000000000001708 94.0
SYD3_k127_8561966_9 - - - - 0.0000000000000004246 91.0
SYD3_k127_8638397_0 3-beta hydroxysteroid dehydrogenase/isomerase family K10011,K12449 - 1.1.1.305,2.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 519.0
SYD3_k127_8638397_1 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008783 488.0
SYD3_k127_8638397_10 - - - - 0.000274 53.0
SYD3_k127_8638397_2 Glycosyl transferase family 2 K10012,K20534 - 2.4.2.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005841 381.0
SYD3_k127_8638397_3 ATPases associated with a variety of cellular activities K01990,K09689,K09691,K09693 - 3.6.3.38,3.6.3.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 334.0
SYD3_k127_8638397_4 Formyl transferase K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000005945 274.0
SYD3_k127_8638397_5 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001056 251.0
SYD3_k127_8638397_6 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000002288 231.0
SYD3_k127_8638397_7 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000003078 243.0
SYD3_k127_8638397_8 Transport permease protein K09688,K09690 - - 0.0000000000000000000000000000000000007189 150.0
SYD3_k127_8638397_9 PFAM phosphoesterase PA-phosphatase related K19302 - 3.6.1.27 0.0000000000000000000000003424 120.0
SYD3_k127_8683191_0 Involved in the tonB-independent uptake of proteins - - - 2.144e-213 691.0
SYD3_k127_8683191_1 Involved in the tonB-independent uptake of proteins K01256,K03641 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 488.0
SYD3_k127_8683191_2 Mandelate racemase muconate lactonizing enzyme K02549,K19802 - 4.2.1.113,5.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000001166 261.0
SYD3_k127_8683191_3 Putative restriction endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000193 216.0
SYD3_k127_8683191_4 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 0.0000000000000000000000000000000000007377 145.0
SYD3_k127_8683191_5 Thioesterase superfamily - - - 0.000000000000000000000000156 112.0
SYD3_k127_8683191_6 oxidoreductase activity - - - 0.000000323 62.0
SYD3_k127_8683191_7 - - - - 0.000008923 53.0
SYD3_k127_8710536_0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005729 522.0
SYD3_k127_8710536_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003583 496.0
SYD3_k127_8710536_2 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008762 455.0
SYD3_k127_8710536_3 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 347.0
SYD3_k127_8710536_4 Proline dehydrogenase K00318 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001929 263.0
SYD3_k127_8710536_5 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000001474 213.0
SYD3_k127_8710536_7 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.000000001181 61.0
SYD3_k127_8751771_0 COG0367 Asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 534.0
SYD3_k127_8751771_1 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005301 353.0
SYD3_k127_8751771_10 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000279 145.0
SYD3_k127_8751771_11 Methyltransferase domain - - - 0.00000000000000000000000000000005809 133.0
SYD3_k127_8751771_2 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 333.0
SYD3_k127_8751771_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 327.0
SYD3_k127_8751771_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001813 263.0
SYD3_k127_8751771_5 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006281 281.0
SYD3_k127_8751771_6 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000002407 251.0
SYD3_k127_8751771_7 peptidoglycan biosynthetic process K03980,K21004 - - 0.00000000000000000000000000000000000000000000000000000000000000002113 239.0
SYD3_k127_8751771_8 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000004317 203.0
SYD3_k127_8751771_9 COG3039 Transposase and inactivated derivatives IS5 family K07481 - - 0.0000000000000000000000000000000000000000000003464 175.0
SYD3_k127_8844427_0 Sortilin, neurotensin receptor 3, - - - 0.0 1255.0
SYD3_k127_8844427_1 Phosphoketolase K01621 - 4.1.2.22,4.1.2.9 3.358e-216 687.0
SYD3_k127_8844427_10 PIN domain - - - 0.0000003597 60.0
SYD3_k127_8844427_11 Thioredoxin-like - - - 0.000002114 51.0
SYD3_k127_8844427_12 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00004552 50.0
SYD3_k127_8844427_13 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0003227 52.0
SYD3_k127_8844427_14 transcriptional regulator, SARP family - - - 0.0007861 52.0
SYD3_k127_8844427_2 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008819 312.0
SYD3_k127_8844427_3 - - - - 0.00000000000000000000000000000000000000000000000000005044 200.0
SYD3_k127_8844427_4 Thioredoxin-like - - - 0.00000000000000000000000000000000000008726 144.0
SYD3_k127_8844427_5 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000001156 134.0
SYD3_k127_8844427_6 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.00000000000000000000000003026 113.0
SYD3_k127_8844427_7 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000000000000000007269 103.0
SYD3_k127_8844427_8 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000001795 89.0
SYD3_k127_8849879_0 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003955 512.0
SYD3_k127_8849879_1 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003996 374.0
SYD3_k127_8849879_2 Methyltransferase type 12 - - - 0.00000000000000000000000000000000000000000000006147 179.0
SYD3_k127_8849879_4 thiolester hydrolase activity - - - 0.00000000002385 64.0
SYD3_k127_8849879_5 integral membrane protein - - - 0.000001514 58.0
SYD3_k127_8870575_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 8.801e-239 758.0
SYD3_k127_8870575_1 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 572.0
SYD3_k127_8870575_10 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000004745 89.0
SYD3_k127_8870575_11 ig-like, plexins, transcription factors - - - 0.0000000000000000385 97.0
SYD3_k127_8870575_12 PFAM Fimbrial assembly family protein K02663 - - 0.0000000005795 72.0
SYD3_k127_8870575_14 Bacterial Fe(2+) trafficking - - - 0.00001136 56.0
SYD3_k127_8870575_15 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K12257 - - 0.00002387 48.0
SYD3_k127_8870575_2 pilus assembly protein K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009802 345.0
SYD3_k127_8870575_3 Secretin and TonB N terminus short domain K02666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 339.0
SYD3_k127_8870575_4 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000008209 226.0
SYD3_k127_8870575_5 Domain of unknown function DUF11 - - - 0.0000000000000000000000000000000000000009111 171.0
SYD3_k127_8870575_6 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000001554 137.0
SYD3_k127_8870575_7 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.000000000000000000000000000008002 134.0
SYD3_k127_8870575_8 Pilus assembly protein, PilO K02664 - - 0.000000000000000000000000001258 120.0
SYD3_k127_8870575_9 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.000000000000000002427 100.0
SYD3_k127_8895397_0 3-demethylubiquinone-9 3-O-methyltransferase activity K07011,K20444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 387.0
SYD3_k127_8895397_1 Toxic component of a toxin-antitoxin (TA) module. An RNase - GO:0005575,GO:0005576 - 0.000000000000000000000000000000000003365 153.0
SYD3_k127_8895397_2 PFAM glycosyl transferase family 39 K14340 - - 0.0000000000000000000000001531 116.0
SYD3_k127_8895397_3 toxin-antitoxin pair type II binding K06284 - - 0.0000000002685 64.0
SYD3_k127_8895397_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0001006 54.0
SYD3_k127_8932213_0 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02481,K13599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 474.0
SYD3_k127_8932213_1 Glutamate formiminotransferase K00603,K13990 - 2.1.2.5,4.3.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 361.0
SYD3_k127_8932213_2 His Kinase A (phosphoacceptor) domain K13598 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 377.0
SYD3_k127_8932213_3 peptidyl-tyrosine sulfation - - - 0.0004099 53.0
SYD3_k127_8936609_0 Apoptosis-inducing factor, mitochondrion-associated, C-term - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000752 486.0
SYD3_k127_8936609_1 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007181 419.0
SYD3_k127_8936609_2 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006583 320.0
SYD3_k127_8936609_3 Protein of unknown function (DUF2400) - - - 0.00000000000000000000000000000000000000000000000000000009194 213.0
SYD3_k127_8936609_4 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000003454 201.0
SYD3_k127_8936609_5 GTP cyclohydrolase I K01495 - 3.5.4.16 0.000000000000000000000000000000000000000000002063 175.0
SYD3_k127_8936609_6 Thioredoxin-like - - - 0.000000000000000000000001644 113.0
SYD3_k127_8936609_7 LytTr DNA-binding domain K02477 - - 0.000000000000000000006741 104.0
SYD3_k127_9013446_0 Ammonium Transporter K03320 - - 6.944e-197 622.0
SYD3_k127_9013446_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914 471.0
SYD3_k127_9013446_2 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005248 432.0
SYD3_k127_9013446_3 beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005188 404.0
SYD3_k127_9013446_4 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000002799 202.0
SYD3_k127_9013446_5 DinB superfamily - - - 0.00000000000000000000001885 109.0
SYD3_k127_9028361_0 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004417 317.0
SYD3_k127_9028361_1 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005478 256.0
SYD3_k127_9028361_10 exo-alpha-(2->6)-sialidase activity - - - 0.000007492 59.0
SYD3_k127_9028361_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000002307 254.0
SYD3_k127_9028361_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000005813 193.0
SYD3_k127_9028361_4 cellulase activity - - - 0.0000000000000000000000000000002131 137.0
SYD3_k127_9028361_5 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000000000003395 138.0
SYD3_k127_9028361_6 - - - - 0.0000000000000000000000009952 123.0
SYD3_k127_9028361_7 Cupin domain - - - 0.000000000000000006414 87.0
SYD3_k127_9028361_8 Domain of unknown function DUF11 - - - 0.00000009021 66.0
SYD3_k127_9028361_9 exo-alpha-(2->6)-sialidase activity - - - 0.0000001599 65.0
SYD3_k127_9100457_0 Organic Anion Transporter Polypeptide (OATP) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003808 289.0
SYD3_k127_9100457_1 calcium- and calmodulin-responsive adenylate cyclase activity K01406,K07004 - 3.4.24.40 0.00000000000000000000000000000000000000000000000007218 198.0
SYD3_k127_9100457_2 Belongs to the peptidase S8 family - - - 0.0000000000000003211 93.0
SYD3_k127_9101347_0 glycosyl transferase group 1 K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007236 416.0
SYD3_k127_9101347_1 Belongs to the phosphoglycerate kinase family K00927,K01803 - 2.7.2.3,5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006355 412.0
SYD3_k127_9101347_10 Bacillithiol biosynthesis BshC K22136 - - 0.000000000000000000000000000000000002254 159.0
SYD3_k127_9101347_11 Uncharacterized protein family UPF0029 - - - 0.0000000000000000000000000000012 132.0
SYD3_k127_9101347_12 - - - - 0.000000000000000000001023 105.0
SYD3_k127_9101347_13 Haemolytic K08998 - - 0.000000000000000072 84.0
SYD3_k127_9101347_14 Preprotein translocase SecG subunit K03075 - - 0.00000000000001554 79.0
SYD3_k127_9101347_15 PFAM Uncharacterised protein family UPF0150 - - - 0.0000002903 60.0
SYD3_k127_9101347_16 transport - - - 0.000002811 59.0
SYD3_k127_9101347_17 response to antibiotic - - - 0.00002064 51.0
SYD3_k127_9101347_18 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.00009728 45.0
SYD3_k127_9101347_19 gamma-glutamyltranspeptidase K00681 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006082,GO:0006508,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0019538,GO:0019752,GO:0030288,GO:0030313,GO:0031975,GO:0034722,GO:0036374,GO:0042597,GO:0043094,GO:0043102,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070011,GO:0071704,GO:0097264,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.3.2.2,3.4.19.13 0.0001791 51.0
SYD3_k127_9101347_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003289 271.0
SYD3_k127_9101347_4 PFAM GlcNAc-PI de-N-acetylase K01463 - - 0.000000000000000000000000000000000000000000000000000000000001446 218.0
SYD3_k127_9101347_5 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000005741 209.0
SYD3_k127_9101347_6 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000004357 190.0
SYD3_k127_9101347_7 - - - - 0.0000000000000000000000000000000000000000000000239 174.0
SYD3_k127_9101347_8 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism K01488,K18286 GO:0000034,GO:0003674,GO:0003824,GO:0006139,GO:0006144,GO:0006145,GO:0006146,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009113,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0043103,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0046083,GO:0046100,GO:0046101,GO:0046112,GO:0046113,GO:0046148,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0072523,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.4.4,3.5.4.40 0.00000000000000000000000000000000000000000000008095 183.0
SYD3_k127_9101347_9 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000009012 160.0
SYD3_k127_9140820_0 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000094 300.0
SYD3_k127_9140820_1 PFAM glycosyl transferase family 39 K07264 - 2.4.2.43 0.00000000000000000000000000000000000000000000000000000000000000004737 243.0
SYD3_k127_9140820_2 Hep Hag repeat protein - GO:0005575,GO:0005576 - 0.000000000000000000000000000000000000000000000000000000000000001468 239.0
SYD3_k127_9140820_3 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000009589 154.0
SYD3_k127_917785_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688,K18786 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.321 6.146e-304 957.0
SYD3_k127_9212695_0 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003305 466.0
SYD3_k127_9212695_1 Mandelate racemase muconate lactonizing enzyme K02549,K19802 - 4.2.1.113,5.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000723 438.0
SYD3_k127_9212695_2 peptide catabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001418 267.0
SYD3_k127_9212695_3 Putative restriction endonuclease - - - 0.000000000000000000000000000000000000000000000000000000005494 205.0
SYD3_k127_9212695_4 - - - - 0.00000000000000000000000001139 118.0
SYD3_k127_9240558_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 7.101e-199 631.0
SYD3_k127_9240558_1 AAA ATPase, central domain protein K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 476.0
SYD3_k127_9240558_2 - - - - 0.00000000000001214 86.0
SYD3_k127_9240558_3 monooxygenase activity - - - 0.0009015 46.0
SYD3_k127_9300163_0 4Fe-4S single cluster domain K06937 - - 6.943e-241 759.0
SYD3_k127_9300163_1 GTP-binding protein TypA K06207 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003843 644.0
SYD3_k127_9300163_10 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000004019 144.0
SYD3_k127_9300163_11 TIGRFAM Outer membrane assembly lipoprotein YfiO K05807 - - 0.0000000000000000000000002167 121.0
SYD3_k127_9300163_12 phosphotransferase related to Ser Thr protein K07102 - 2.7.1.221 0.0000000000000000000004315 111.0
SYD3_k127_9300163_13 Translation initiation factor SUI1 K03113 - - 0.000000000000000004304 91.0
SYD3_k127_9300163_14 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03116 - - 0.000000000005178 67.0
SYD3_k127_9300163_15 PFAM Protein kinase domain K12132 - 2.7.11.1 0.000000001687 67.0
SYD3_k127_9300163_16 positive regulation of growth rate - - - 0.000000007427 67.0
SYD3_k127_9300163_17 PFAM helix-turn-helix, Fis-type - - - 0.0000114 52.0
SYD3_k127_9300163_2 DNA helicase K03654 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004112 429.0
SYD3_k127_9300163_3 Phosphoglycerate mutase family K02226 - 3.1.3.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 312.0
SYD3_k127_9300163_4 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008655 278.0
SYD3_k127_9300163_5 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001488 281.0
SYD3_k127_9300163_6 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.000000000000000000000000000000000000000000000000000000000000000000000001188 269.0
SYD3_k127_9300163_7 Belongs to the ribulose-phosphate 3-epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000449 241.0
SYD3_k127_9300163_8 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000003746 194.0
SYD3_k127_9321749_0 AAA domain - - - 9.094e-296 929.0
SYD3_k127_9321749_1 DNA polymerase beta thumb K02347 - - 5.903e-242 763.0
SYD3_k127_9321749_2 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002877 613.0
SYD3_k127_9321749_3 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006544 363.0
SYD3_k127_9321749_4 Universal stress protein K06149 - - 0.000000000000000000002105 101.0
SYD3_k127_9321749_5 Domain of unknown function (DUF4136) - - - 0.000000000000000000002893 100.0
SYD3_k127_9321749_6 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000005354 89.0
SYD3_k127_9321749_7 Belongs to the universal stress protein A family - - - 0.000000004963 68.0
SYD3_k127_9360571_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 7.525e-314 989.0
SYD3_k127_9360571_1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00262 - 1.4.1.4 6.41e-244 759.0
SYD3_k127_9360571_2 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K13599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 482.0
SYD3_k127_9360571_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 341.0
SYD3_k127_9360571_4 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000002732 184.0
SYD3_k127_9360571_5 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000002218 188.0
SYD3_k127_9360571_6 CoA binding domain K06929 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000083 136.0
SYD3_k127_9360571_7 TonB C terminal K03832 - - 0.00000000001699 72.0
SYD3_k127_9364737_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 4.548e-234 735.0
SYD3_k127_9364737_1 COG3839 ABC-type sugar transport systems, ATPase components - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000088 386.0
SYD3_k127_9364737_2 PFAM FAD linked oxidase domain protein K00104,K11472 GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009441,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0017144,GO:0019154,GO:0019752,GO:0032787,GO:0034308,GO:0034310,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046296,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575,GO:1901615,GO:1901616 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000008737 262.0
SYD3_k127_9364737_3 Extracellular solute-binding protein K02027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004109 263.0
SYD3_k127_9364737_4 Binding-protein-dependent transport system inner membrane component K02025,K10237 - - 0.000512 51.0
SYD3_k127_9384486_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 537.0
SYD3_k127_9384486_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 547.0
SYD3_k127_9384486_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 518.0
SYD3_k127_9384486_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 407.0
SYD3_k127_9384486_4 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000006122 199.0
SYD3_k127_9384486_5 NUDIX domain - - - 0.000000000000000000000000000000008353 136.0
SYD3_k127_9494028_0 coagulation factor 5 8 type - - - 1.003e-240 788.0
SYD3_k127_9494028_1 Putative glucoamylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 606.0
SYD3_k127_9494028_2 ABC transporter substrate-binding protein K02027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003935 457.0
SYD3_k127_9494028_3 Binding-protein-dependent transport system inner membrane component K02025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005555 366.0
SYD3_k127_9494028_4 ABC-type sugar transport system, permease component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003054 326.0
SYD3_k127_9530600_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1073.0
SYD3_k127_9530600_1 PDZ DHR GLGF domain protein K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005695 325.0
SYD3_k127_9530600_2 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 300.0
SYD3_k127_9530600_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000001625 144.0
SYD3_k127_9530600_4 EamA-like transporter family - - - 0.00000000000002332 83.0
SYD3_k127_9566296_0 Fumarate reductase flavoprotein C-term K00239,K00244 - 1.3.5.1,1.3.5.4 3.072e-252 793.0
SYD3_k127_9566296_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 501.0
SYD3_k127_9566296_10 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000001074 220.0
SYD3_k127_9566296_11 succinate dehydrogenase K00241 - - 0.000000000000000000000000000000000000000000000000000000003185 205.0
SYD3_k127_9566296_12 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.000000000000000000000000000000000000000002122 160.0
SYD3_k127_9566296_13 von Willebrand factor (vWF) type A domain K07114 - - 0.000000000000000000000000000000004305 144.0
SYD3_k127_9566296_14 Thioesterase superfamily K10806 - - 0.00000000000000000000000000000004141 129.0
SYD3_k127_9566296_15 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.000000000000000000000001223 112.0
SYD3_k127_9566296_16 Psort location CytoplasmicMembrane, score - - - 0.00004916 56.0
SYD3_k127_9566296_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 421.0
SYD3_k127_9566296_3 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003419 415.0
SYD3_k127_9566296_4 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007527 379.0
SYD3_k127_9566296_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006225 389.0
SYD3_k127_9566296_6 succinate dehydrogenase K00240 GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0022900,GO:0022904,GO:0044237,GO:0044464,GO:0045333,GO:0055114,GO:0071944 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007677 339.0
SYD3_k127_9566296_7 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003815 262.0
SYD3_k127_9566296_8 Kdo2-lipid A biosynthetic process K02517,K22311 GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016746,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.3.1.241,2.3.1.265 0.000000000000000000000000000000000000000000000000000000000000000003041 250.0
SYD3_k127_9566296_9 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000001101 244.0
SYD3_k127_9602636_0 PFAM tRNA synthetase class II (D K and N), nucleic acid binding OB-fold tRNA helicase-type K01893 - 6.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009286 551.0
SYD3_k127_9602636_1 Acyl-CoA dehydrogenase, C-terminal domain K00252 - 1.3.8.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009705 538.0
SYD3_k127_9602636_10 Probably functions as a manganese efflux pump - - - 0.0000000000000000000000000000000000004568 162.0
SYD3_k127_9602636_11 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000000000000003781 113.0
SYD3_k127_9602636_12 toxin-antitoxin pair type II binding - - - 0.00000000062 64.0
SYD3_k127_9602636_13 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000019 67.0
SYD3_k127_9602636_14 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase - - - 0.00003061 57.0
SYD3_k127_9602636_15 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000038 57.0
SYD3_k127_9602636_2 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009066 422.0
SYD3_k127_9602636_3 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 300.0
SYD3_k127_9602636_4 Heat shock protein DnaJ domain protein - - - 0.000000000000000000000000000000000000000000000000000000001503 214.0
SYD3_k127_9602636_5 PFAM Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000000002612 193.0
SYD3_k127_9602636_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000001671 168.0
SYD3_k127_9602636_7 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000007583 156.0
SYD3_k127_9602636_8 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000000000000000000000000000000000001195 166.0
SYD3_k127_9602636_9 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000006442 150.0
SYD3_k127_9673858_0 malic enzyme K00027,K00029,K00625,K13788 GO:0003674,GO:0003824,GO:0004470,GO:0004473,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0055114 1.1.1.38,1.1.1.40,2.3.1.8 7.021e-278 874.0
SYD3_k127_9673858_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003567 576.0
SYD3_k127_9673858_10 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000001014 88.0
SYD3_k127_9673858_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 539.0
SYD3_k127_9673858_3 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 372.0
SYD3_k127_9673858_4 glycosyl hydrolase, BNR repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007086 370.0
SYD3_k127_9673858_5 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004422 329.0
SYD3_k127_9673858_6 D-isomer specific 2-hydroxyacid dehydrogenase K00015 - 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007472 295.0
SYD3_k127_9673858_7 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000398 171.0
SYD3_k127_9673858_8 ECF sigma factor K03088 - - 0.0000000000000000000000000000000000003864 148.0
SYD3_k127_9673858_9 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.000000000000000000000000000004938 140.0
SYD3_k127_9689910_0 ligase activity, forming nitrogen-metal bonds K02230 - 6.6.1.2 1e-323 1002.0
SYD3_k127_9689910_1 PFAM Cold-shock protein, DNA-binding - - - 0.0000000000000000000281 96.0
SYD3_k127_9866509_0 Involved in the tonB-independent uptake of proteins - - - 4.115e-225 726.0
SYD3_k127_9866509_1 Tetratricopeptide repeats K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005185 471.0
SYD3_k127_9866509_2 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002719 353.0
SYD3_k127_9866509_3 Protein of unknown function (DUF2442) - - - 0.000000000000000000000000000003079 122.0
SYD3_k127_9866509_4 Domain of unknown function (DUF4160) - - - 0.000000000000000000000003809 106.0
SYD3_k127_9866509_5 Pfam SNARE associated Golgi protein - - - 0.00000000001108 74.0
SYD3_k127_9866509_6 Protein of unknown function (DUF4197) - - - 0.000000003175 61.0
SYD3_k127_9920471_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 2.826e-217 687.0
SYD3_k127_9920471_1 Transketolase, pyrimidine binding domain K00167 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 467.0
SYD3_k127_9920471_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 346.0
SYD3_k127_9920471_3 - - - - 0.0000000000000000000000000000000000000000000000000000002764 200.0
SYD3_k127_9920471_4 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000493 163.0
SYD3_k127_9920471_7 N-terminal domain of galactosyltransferase - - - 0.000000000003613 80.0
SYD3_k127_9920471_8 SMART Transport-associated and nodulation region K04065 - - 0.0000004138 63.0