logo

Overview

ID MAG03801
Name SYD3_bin.39
Sample SMP0096
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family SG8-41
Genus DSOT01
Species
Assembly information
Completeness (%) 93.34
Contamination (%) 3.95
GC content (%) 64.0
N50 (bp) 8,405
Genome size (bp) 3,590,586

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3751

Gene name Description KEGG GOs EC E-value Score Sequence
SYD3_k127_10009336_0 Bacterioferritin (cytochrome b1) K03594 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000000000000000001834 232.0
SYD3_k127_10009336_1 CHASE3 domain K05962 - 2.7.13.1 0.000000000000000000000000000000000000000000000000003735 197.0
SYD3_k127_10009336_2 - - - - 0.0000000000000000000000000000000000000000000009078 173.0
SYD3_k127_10009336_3 Belongs to the UPF0337 (CsbD) family - - - 0.000000000000000000000000001112 116.0
SYD3_k127_10009336_4 HWE histidine kinase - - - 0.00000000000000000000004899 112.0
SYD3_k127_10009336_5 - - - - 0.0000000000000001177 80.0
SYD3_k127_10009336_6 UPF0391 membrane protein - - - 0.000000000000002022 79.0
SYD3_k127_10009336_7 Glycosyl transferases group 1 K12995 - 2.4.1.348 0.000000000005663 78.0
SYD3_k127_10009336_8 SMART Transport-associated and nodulation region K04065 - - 0.000000000009469 71.0
SYD3_k127_10009336_9 Family of unknown function (DUF5329) - - - 0.00000000002853 69.0
SYD3_k127_10014874_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 - 1.4.1.4 2.718e-208 656.0
SYD3_k127_10019167_0 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases K00174 - 1.2.7.11,1.2.7.3 2.461e-224 715.0
SYD3_k127_10019167_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 490.0
SYD3_k127_10019167_2 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 362.0
SYD3_k127_10019167_3 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 354.0
SYD3_k127_10019167_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 315.0
SYD3_k127_10019167_5 Transcriptional regulator K03566 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001955 284.0
SYD3_k127_10019167_6 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000000000000000000000000000000000007919 171.0
SYD3_k127_10019167_7 Major facilitator superfamily - - - 0.00000000000000006234 81.0
SYD3_k127_10019167_8 - - - - 0.0000000000000001721 81.0
SYD3_k127_10019167_9 - - - - 0.0000139 52.0
SYD3_k127_10042108_0 glucose sorbosone K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 557.0
SYD3_k127_10042108_1 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 439.0
SYD3_k127_10042108_2 Pyridine nucleotide-disulphide oxidoreductase K05297,K12265 - 1.18.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 428.0
SYD3_k127_10042108_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001737 286.0
SYD3_k127_10042108_4 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003233 246.0
SYD3_k127_10110098_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000004493 232.0
SYD3_k127_10128895_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 365.0
SYD3_k127_10128895_1 PFAM Lytic transglycosylase catalytic - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006543 268.0
SYD3_k127_10128895_2 Virulence factor BrkB K07058 - - 0.00000000004973 68.0
SYD3_k127_10130678_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 2.848e-316 990.0
SYD3_k127_10130678_1 Methionine aminopeptidase K01265 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0070084,GO:0071704,GO:0140096,GO:1901564 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 452.0
SYD3_k127_10130678_2 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004572 402.0
SYD3_k127_10130678_3 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 384.0
SYD3_k127_10130678_4 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000003235 121.0
SYD3_k127_10130678_5 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions - - - 0.000000000000000001409 85.0
SYD3_k127_10172844_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 8.317e-220 696.0
SYD3_k127_10172844_1 Type II secretion system (T2SS), protein F K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008164 396.0
SYD3_k127_10172844_2 Pectate lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009432 318.0
SYD3_k127_10172844_4 general secretion pathway protein G K02456 - - 0.0000000000000000000000000000000000000000000000000000001251 203.0
SYD3_k127_10172844_5 Belongs to the glycosyl hydrolase family 6 K19668 - 3.2.1.91 0.00000000000000765 88.0
SYD3_k127_10184149_0 Protein conserved in bacteria K20274 - - 0.00000000000000000000000000000000000000000000002935 194.0
SYD3_k127_10184149_1 COG0834 ABC-type amino acid transport signal transduction systems, periplasmic component domain K02030,K10001 - - 0.0007844 42.0
SYD3_k127_10273709_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 4.548e-217 679.0
SYD3_k127_10273709_1 Belongs to the citrate synthase family K01647,K01659 - 2.3.3.1,2.3.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 574.0
SYD3_k127_10273709_2 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 485.0
SYD3_k127_10273709_3 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008614 451.0
SYD3_k127_10273709_4 phosphate acetyltransferase K00625 - 2.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 374.0
SYD3_k127_10273709_5 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000004457 246.0
SYD3_k127_10273709_6 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000000000000000002757 209.0
SYD3_k127_10273709_7 Flagellar Assembly Protein A K09749 - - 0.0000000000000000002668 93.0
SYD3_k127_10290329_0 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004858 383.0
SYD3_k127_10290329_1 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000009522 212.0
SYD3_k127_10291808_0 Helicase K03722 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 578.0
SYD3_k127_10291808_1 Protein of unknown function (DUF1232) - - - 0.00000000000000000000000002736 109.0
SYD3_k127_10331054_0 Oxidoreductase - - - 4.365e-225 708.0
SYD3_k127_10331054_1 Glycine cleavage T-protein C-terminal barrel domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002992 276.0
SYD3_k127_10345018_0 Adenylosuccinate lyase C-terminus K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004778 556.0
SYD3_k127_10345018_1 LVIVD repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003729 474.0
SYD3_k127_10345018_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000002316 115.0
SYD3_k127_10346682_0 Polysaccharide pyruvyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004692 470.0
SYD3_k127_10346682_1 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007394 364.0
SYD3_k127_10346682_2 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001821 278.0
SYD3_k127_10346682_3 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000908 180.0
SYD3_k127_10346682_4 Protein of unknown function (DUF3568) - - - 0.00000000000000000000000002296 113.0
SYD3_k127_10346682_5 - - - - 0.000000000000000000004341 95.0
SYD3_k127_10346682_6 - - - - 0.00000000000001751 82.0
SYD3_k127_10346682_7 flavin adenine dinucleotide binding - - - 0.000000000001013 78.0
SYD3_k127_10346682_8 Transcriptional regulator - - - 0.00000000008083 67.0
SYD3_k127_10355735_0 PFAM Uncharacterised protein family UPF0027 K14415 - 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 600.0
SYD3_k127_10355735_1 XdhC and CoxI family K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 395.0
SYD3_k127_10355735_2 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 387.0
SYD3_k127_10355735_3 glutathione transferase activity K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000005226 254.0
SYD3_k127_10355735_4 carbon monoxide dehydrogenase K09386 - - 0.0000000000000000000000000000000000000000000000000002616 190.0
SYD3_k127_10355735_5 TRANSCRIPTIONal - - - 0.00000000000006255 74.0
SYD3_k127_10379167_0 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 349.0
SYD3_k127_10379167_1 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 316.0
SYD3_k127_10400037_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 0.0 1291.0
SYD3_k127_10469023_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 8.051e-261 815.0
SYD3_k127_10469023_1 protein conserved in bacteria K09989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008095 579.0
SYD3_k127_10469023_10 - - - - 0.0000002203 57.0
SYD3_k127_10469023_2 AAA domain (Cdc48 subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003894 476.0
SYD3_k127_10469023_3 7 transmembrane helices usually fused to an inactive transglutaminase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 407.0
SYD3_k127_10469023_4 TIGRFAM alpha-L-glutamate ligase-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 384.0
SYD3_k127_10469023_5 methylated-DNA- protein -cysteine S-methyltransferase K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009583 333.0
SYD3_k127_10469023_6 THIoesterase K18700 - 3.1.2.29 0.0000000000000000000000000000000000000000000000000000000002093 206.0
SYD3_k127_10469023_7 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.0000000000000000000000000000000000000000000000005958 181.0
SYD3_k127_10469023_8 Putative ATP-dependant zinc protease - - - 0.00000000000000000000000006793 114.0
SYD3_k127_10469023_9 PFAM Xylose isomerase domain protein TIM barrel K01816,K22131 - 5.3.1.22,5.3.1.35 0.000000000000003582 79.0
SYD3_k127_10549721_0 COG1960 Acyl-CoA dehydrogenases K00253 - 1.3.8.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005916 513.0
SYD3_k127_10549721_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 341.0
SYD3_k127_10573847_0 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000859 441.0
SYD3_k127_10573847_1 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007561 268.0
SYD3_k127_10573847_2 - - - - 0.0000000002481 61.0
SYD3_k127_10573847_3 Citrate transporter - - - 0.000008278 48.0
SYD3_k127_10642116_0 AMP-dependent synthetase - - - 0.0 1100.0
SYD3_k127_10642116_1 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000005347 189.0
SYD3_k127_10642116_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000002771 154.0
SYD3_k127_10642116_3 - - - - 0.0000000000000000000006245 104.0
SYD3_k127_10642116_4 radical SAM domain protein K13601,K13602 - 2.1.1.331,2.1.1.332 0.00000000001688 68.0
SYD3_k127_10650595_0 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005282 505.0
SYD3_k127_10650595_1 aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 355.0
SYD3_k127_10650595_2 Phosphoglycerate mutase K15634 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000003778 211.0
SYD3_k127_10650595_3 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000002701 203.0
SYD3_k127_10650595_4 protein conserved in bacteria - - - 0.0000000000000000000000566 101.0
SYD3_k127_10853936_0 AraC family transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000001486 245.0
SYD3_k127_10853936_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000039 160.0
SYD3_k127_1091261_0 Sulfatase K01130 - 3.1.6.1 2.018e-203 640.0
SYD3_k127_1091261_1 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000119 239.0
SYD3_k127_1091261_2 membrane - - - 0.00000000000000000000000000000000000000000000000000000001808 207.0
SYD3_k127_112891_0 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000001341 220.0
SYD3_k127_112891_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.00000000000000364 82.0
SYD3_k127_1129459_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 508.0
SYD3_k127_116207_0 Acyclic terpene utilisation family protein AtuA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008573 527.0
SYD3_k127_116207_1 Translation elongation factor K03833 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009425 409.0
SYD3_k127_116207_2 protein conserved in bacteria K07795 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004582 252.0
SYD3_k127_116207_3 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000108 235.0
SYD3_k127_116207_4 Domain of unknown function (DUF4387) - - - 0.00000000000000001373 91.0
SYD3_k127_116207_5 Translation elongation factor K03833 GO:0000049,GO:0000166,GO:0001514,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006412,GO:0006414,GO:0006417,GO:0006451,GO:0006518,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009069,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016259,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031326,GO:0032268,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034248,GO:0034641,GO:0034645,GO:0035368,GO:0035639,GO:0036094,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:2000112 - 0.00002085 49.0
SYD3_k127_1191018_0 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 476.0
SYD3_k127_1191018_1 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 321.0
SYD3_k127_124821_0 Belongs to the aldehyde dehydrogenase family - - - 7.495e-198 621.0
SYD3_k127_124821_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000001039 210.0
SYD3_k127_124821_2 Protein of unknown function (DUF3568) - - - 0.000000000414 61.0
SYD3_k127_125720_0 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000003592 261.0
SYD3_k127_125720_1 Belongs to the GST superfamily K11209 - - 0.000000000000000000000000000000000000000007523 154.0
SYD3_k127_125720_2 catechol 1,2-dioxygenase - - - 0.000000000000000000001838 102.0
SYD3_k127_132288_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 612.0
SYD3_k127_132288_1 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000000000000118 185.0
SYD3_k127_132288_2 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00001206 47.0
SYD3_k127_1335187_0 Asparagine synthase K01953 - 6.3.5.4 9.259e-283 882.0
SYD3_k127_1335187_1 AMP-binding enzyme C-terminal domain - - - 1.41e-213 675.0
SYD3_k127_1335187_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 473.0
SYD3_k127_1335187_3 Methyltransferase small domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 306.0
SYD3_k127_1335187_4 maltose O-acetyltransferase activity - - - 0.0000000000000000000000000000005398 131.0
SYD3_k127_1335187_5 Phosphopantetheine attachment site - - - 0.000000000000000000000001822 105.0
SYD3_k127_1335187_6 GDSL-like Lipase/Acylhydrolase family - - - 0.0003489 51.0
SYD3_k127_1366213_0 Radical SAM K01012 - 2.8.1.6 1.643e-209 657.0
SYD3_k127_1366213_1 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007986 432.0
SYD3_k127_1366213_2 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 396.0
SYD3_k127_1366213_3 biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 366.0
SYD3_k127_1366213_4 geranylgeranyl reductase - - - 0.000000000000000000000000000000000000000000000000000000000000001336 226.0
SYD3_k127_1366213_5 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000000000000000007123 206.0
SYD3_k127_1366213_6 GMP synthase (glutamine-hydrolyzing) activity - - - 0.0000000000000000000000000000000000000000000000000001016 196.0
SYD3_k127_1372988_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 6.549e-279 863.0
SYD3_k127_1372988_1 FAD dependent oxidoreductase - - - 7.734e-194 629.0
SYD3_k127_1372988_10 COG2513 PEP phosphonomutase and related enzymes K01637 GO:0003674,GO:0003824,GO:0004451,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046487,GO:0071704 4.1.3.1 0.0000000000000000000000001337 118.0
SYD3_k127_1372988_12 Helix-turn-helix domain - - - 0.0000000924 61.0
SYD3_k127_1372988_13 - - - - 0.0000001912 53.0
SYD3_k127_1372988_2 Aconitase family (aconitate hydratase) K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005575 607.0
SYD3_k127_1372988_3 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009486 295.0
SYD3_k127_1372988_4 enzyme of poly-gamma-glutamate biosynthesis (Capsule formation) K07282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001541 284.0
SYD3_k127_1372988_5 Aconitase C-terminal domain K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000353 250.0
SYD3_k127_1372988_6 FCD - - - 0.000000000000000000000000000000000000000000000000000002447 198.0
SYD3_k127_1372988_7 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000007007 193.0
SYD3_k127_1372988_8 - - - - 0.0000000000000000000000000000000000000000000001958 178.0
SYD3_k127_1372988_9 type III restriction protein res subunit K01153 - 3.1.21.3 0.00000000000000000000000000000000003686 136.0
SYD3_k127_137510_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 535.0
SYD3_k127_137510_1 COG2951 Membrane-bound lytic murein transglycosylase B - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005101 483.0
SYD3_k127_137510_10 diguanylate cyclase - - - 0.00000000000000000000000465 108.0
SYD3_k127_137510_11 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000003531 94.0
SYD3_k127_137510_12 OsmC-like protein - - - 0.000000001171 63.0
SYD3_k127_137510_13 OsmC-like protein - - - 0.00002815 49.0
SYD3_k127_137510_2 Two-component sensor kinase N-terminal K07649 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 451.0
SYD3_k127_137510_3 COG0534 Na -driven multidrug efflux pump K03327 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006652 400.0
SYD3_k127_137510_4 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001763 275.0
SYD3_k127_137510_5 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004478 261.0
SYD3_k127_137510_6 Membrane protein TerC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006688 260.0
SYD3_k127_137510_7 AraC family transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000008355 243.0
SYD3_k127_137510_8 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.000000000000000000000000000000000000000000000000000000000000000499 222.0
SYD3_k127_137510_9 - - - - 0.000000000000000000000000000000000000000000000000003131 188.0
SYD3_k127_1379846_0 transcription factor binding - - - 0.0000000000000000000000000000007733 129.0
SYD3_k127_1379846_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000343 106.0
SYD3_k127_1381173_0 MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 574.0
SYD3_k127_1381173_1 Nitrile hydratase, alpha chain K01721 - 4.2.1.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 332.0
SYD3_k127_1381173_2 NHase catalyzes the hydration of various nitrile compounds to the corresponding amides K20807 - 4.2.1.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 306.0
SYD3_k127_1381173_3 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.0000000000000000000000000000000000000000000000000000000000000000000002025 243.0
SYD3_k127_1381173_4 Nitrile hydratase beta subunit - - - 0.000000000000000000000000000000000000000000000000000000000003574 210.0
SYD3_k127_1381173_5 Amidohydrolase - - - 0.00000000000000000000000001032 110.0
SYD3_k127_1405328_0 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 363.0
SYD3_k127_1405328_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003751 261.0
SYD3_k127_1405328_2 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.0000000000000000000000000000000009448 140.0
SYD3_k127_1405328_3 cyclic nucleotide-binding - - - 0.000000001879 64.0
SYD3_k127_1412550_0 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000001357 199.0
SYD3_k127_1412550_1 - - - - 0.00000000000000000000000000000001768 133.0
SYD3_k127_1412550_2 - - - - 0.00000000000000000000000006885 113.0
SYD3_k127_1420606_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 418.0
SYD3_k127_1420606_1 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000001854 219.0
SYD3_k127_1420606_2 response regulator - - - 0.0000000000000000000000000000000000000000006956 170.0
SYD3_k127_1443938_0 Putative esterase - - - 0.0000000000000000000000000000000000000000000000001343 183.0
SYD3_k127_1443938_1 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000005786 99.0
SYD3_k127_1452032_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 2.149e-234 737.0
SYD3_k127_1452032_1 Epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000001055 92.0
SYD3_k127_1457064_0 COG2202 FOG PAS PAC domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 309.0
SYD3_k127_1457064_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000001098 154.0
SYD3_k127_14682_0 Bacterial protein of unknown function (DUF853) K06915 - - 1.766e-217 685.0
SYD3_k127_14682_1 Involved in the tonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 583.0
SYD3_k127_14682_10 MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 323.0
SYD3_k127_14682_11 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 323.0
SYD3_k127_14682_12 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001237 274.0
SYD3_k127_14682_13 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003961 273.0
SYD3_k127_14682_14 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009923 247.0
SYD3_k127_14682_15 Peptidyl-tRNA hydrolase K01056 - 3.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000003059 231.0
SYD3_k127_14682_16 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000000000003056 207.0
SYD3_k127_14682_17 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000000000001553 184.0
SYD3_k127_14682_18 Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000000000000000000000000000000001012 179.0
SYD3_k127_14682_19 response to cobalt ion - - - 0.000000000000000000000000000000000000000000000002791 182.0
SYD3_k127_14682_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 564.0
SYD3_k127_14682_20 MTH538 TIR-like domain (DUF1863) - - - 0.000000000000000000000000000000000000167 154.0
SYD3_k127_14682_21 thioesterase K07107 - - 0.000000000000000000000000000000000001905 145.0
SYD3_k127_14682_22 Cell division and transport-associated protein TolA K03646 - - 0.00000000000000000000000000000286 133.0
SYD3_k127_14682_23 Protein of unknown function (DUF3568) - - - 0.000000000000000000000000000007538 124.0
SYD3_k127_14682_24 - - - - 0.0000000000000000000000000001616 125.0
SYD3_k127_14682_25 GHMP kinases N terminal domain K00919 - 2.7.1.148 0.00000000000000000000000002923 109.0
SYD3_k127_14682_26 Domain of unknown function (DUF1840) - - - 0.000000000000000000001028 98.0
SYD3_k127_14682_27 - - - - 0.00000000000000001277 94.0
SYD3_k127_14682_28 Acetyltransferase (GNAT) domain - - - 0.00000001063 63.0
SYD3_k127_14682_3 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 562.0
SYD3_k127_14682_4 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 513.0
SYD3_k127_14682_5 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005768 404.0
SYD3_k127_14682_6 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008461 397.0
SYD3_k127_14682_7 ROK family K00847 - 2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 393.0
SYD3_k127_14682_8 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 365.0
SYD3_k127_14682_9 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 332.0
SYD3_k127_146899_0 Acyl transferase domain in polyketide synthase (PKS) enzymes. - - - 0.0 1549.0
SYD3_k127_146899_1 TIGRFAM amino acid adenylation domain - - - 3.183e-265 852.0
SYD3_k127_146899_10 4'-phosphopantetheinyl transferase superfamily K00997,K06133 - 2.7.8.7 0.000000000000000000000000000000000000000000000000004873 193.0
SYD3_k127_146899_11 A domain family that is part of the cupin metalloenzyme superfamily. - - - 0.000000000000000000001022 97.0
SYD3_k127_146899_2 COG1960 Acyl-CoA dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007513 596.0
SYD3_k127_146899_3 PFAM AMP-dependent synthetase and ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 584.0
SYD3_k127_146899_4 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008492 442.0
SYD3_k127_146899_5 Electron transfer flavoprotein alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 422.0
SYD3_k127_146899_6 Electron transfer flavoprotein, beta subunit K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 371.0
SYD3_k127_146899_7 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009291 345.0
SYD3_k127_146899_8 COG1042 Acyl-CoA synthetase (NDP forming) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003013 272.0
SYD3_k127_146899_9 Thioesterase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006891 269.0
SYD3_k127_147604_0 Putative transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 314.0
SYD3_k127_1476722_0 Tripartite tricarboxylate transporter family receptor K07795 - - 0.000000000000000000000000000000000000000000000000000000000000000000254 241.0
SYD3_k127_1476722_1 - - - - 0.00000000000000000000000000000000000000000008252 165.0
SYD3_k127_1476722_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000005096 119.0
SYD3_k127_1483476_0 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 415.0
SYD3_k127_1483476_1 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000001486 192.0
SYD3_k127_1483476_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000004627 142.0
SYD3_k127_1486822_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 559.0
SYD3_k127_1486822_1 cobalamin synthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 350.0
SYD3_k127_1486822_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 312.0
SYD3_k127_1486822_3 AraC-like ligand binding domain - - - 0.000000000000000000000000000000000000000000000002361 178.0
SYD3_k127_1486822_4 Fructose-bisphosphate aldolase class-I K01623 - 4.1.2.13 0.000000000000000000143 89.0
SYD3_k127_1486831_0 cobalamin synthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 351.0
SYD3_k127_1486831_1 Fructose-bisphosphate aldolase class-I K01623 - 4.1.2.13 0.0000000000000000000758 90.0
SYD3_k127_1486831_2 Amidohydrolase family - - - 0.00002568 49.0
SYD3_k127_1486838_0 Belongs to the CinA family - - - 4.143e-204 643.0
SYD3_k127_1486838_1 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005333 494.0
SYD3_k127_1486838_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008282 246.0
SYD3_k127_1486838_11 lactate metabolic process K00113 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0045333,GO:0046872,GO:0048037,GO:0051536,GO:0051540,GO:0055114,GO:0071944 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000375 240.0
SYD3_k127_1486838_12 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000007248 239.0
SYD3_k127_1486838_13 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000008508 228.0
SYD3_k127_1486838_14 COGs COG0318 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00666 - - 0.000000000000000000000000000000000000000000000000000000002778 201.0
SYD3_k127_1486838_15 response to cobalt ion - - - 0.000000000000000000000000000000000000000000000000000000118 199.0
SYD3_k127_1486838_16 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000001033 175.0
SYD3_k127_1486838_17 transporter solute receptor, DctP family - - - 0.0000000000000000000000000000000009908 141.0
SYD3_k127_1486838_18 Cold shock K03704 - - 0.0000000000000000000000000000007912 123.0
SYD3_k127_1486838_19 Bacterial protein of unknown function (DUF883) - - - 0.0000000000000000000000000002331 118.0
SYD3_k127_1486838_2 L-lactate dehydrogenase K00101,K15054 - 1.1.2.3,1.1.99.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 464.0
SYD3_k127_1486838_21 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0000000000000001307 84.0
SYD3_k127_1486838_22 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0003245 43.0
SYD3_k127_1486838_24 YqjK-like protein - - - 0.0006831 50.0
SYD3_k127_1486838_3 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 392.0
SYD3_k127_1486838_4 Uncharacterized protein conserved in bacteria (DUF2331) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 386.0
SYD3_k127_1486838_5 hydrolases or acyltransferases, alpha beta hydrolase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003059 380.0
SYD3_k127_1486838_6 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 374.0
SYD3_k127_1486838_7 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004857 322.0
SYD3_k127_1486838_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005104 307.0
SYD3_k127_1486838_9 LemA Family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008516 267.0
SYD3_k127_1491111_0 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 439.0
SYD3_k127_1491111_1 beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000002386 196.0
SYD3_k127_1491111_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000002083 162.0
SYD3_k127_1491111_3 Domain of unknown function (DUF1330) - - - 0.0000000000000000000000000000001092 136.0
SYD3_k127_1491111_4 Glyoxalase-like domain - - - 0.000000000000000000000000001354 124.0
SYD3_k127_1491111_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000005715 91.0
SYD3_k127_1499695_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1163.0
SYD3_k127_1499695_1 Acyl-CoA dehydrogenase, C-terminal domain K18244 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006227 523.0
SYD3_k127_1499695_10 dehydratase K18290 - 4.2.1.56 0.0000000000000000000000000000000000000000000000000000000000436 214.0
SYD3_k127_1499695_11 Protein of unknown function (DUF3309) - - - 0.0000000000000002346 82.0
SYD3_k127_1499695_2 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 492.0
SYD3_k127_1499695_3 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003785 484.0
SYD3_k127_1499695_4 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005142 413.0
SYD3_k127_1499695_5 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346,K03502 GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0042276,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1990904 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 370.0
SYD3_k127_1499695_6 Protein of unknown function (DUF3182) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 366.0
SYD3_k127_1499695_7 Uncharacterised protein family (UPF0227) K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 312.0
SYD3_k127_1499695_8 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001122 262.0
SYD3_k127_1507544_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003058 553.0
SYD3_k127_1507544_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003836 551.0
SYD3_k127_1507544_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003471 477.0
SYD3_k127_1507544_3 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.000000000000000000000000006658 111.0
SYD3_k127_1510327_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1275.0
SYD3_k127_1510327_1 extracellular solute-binding protein - - - 0.0 1029.0
SYD3_k127_1510327_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 3.202e-223 697.0
SYD3_k127_1510327_3 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005038 508.0
SYD3_k127_1510327_4 SurA N-terminal domain K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 519.0
SYD3_k127_1510327_5 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 437.0
SYD3_k127_1510327_6 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 364.0
SYD3_k127_1510327_7 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008164 351.0
SYD3_k127_1510327_8 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003507 271.0
SYD3_k127_1510327_9 - - - - 0.00000000000112 73.0
SYD3_k127_1510374_0 Multidrug transporter K08161 - - 0.000000000000000000000000000000000002184 150.0
SYD3_k127_1510982_0 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000006816 179.0
SYD3_k127_1510982_1 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000815 135.0
SYD3_k127_1510982_2 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.000000005344 57.0
SYD3_k127_1519592_0 AAA domain K07028 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003652 484.0
SYD3_k127_1519592_1 S-Adenosylmethionine synthetase K00789 - 2.5.1.6 0.00000000000006255 74.0
SYD3_k127_1536463_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 9.176e-309 952.0
SYD3_k127_1536463_1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.00000000000000306 75.0
SYD3_k127_1536463_2 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000002124 53.0
SYD3_k127_155102_0 GMP synthase C terminal domain K01951 - 6.3.5.2 1.722e-285 883.0
SYD3_k127_155102_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004371 547.0
SYD3_k127_1551190_0 Cell wall hydrolase autolysin K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 538.0
SYD3_k127_1551190_1 Domain of unknown function (DUF1730) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 516.0
SYD3_k127_1551190_2 SelR domain K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000001088 229.0
SYD3_k127_1551190_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000001981 130.0
SYD3_k127_1551190_4 nuclease K01174 - 3.1.31.1 0.000000000000000000000000000001764 126.0
SYD3_k127_15564_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 6.056e-213 674.0
SYD3_k127_15564_1 Permease, YjgP YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 452.0
SYD3_k127_15564_2 Permease, YjgP YjgQ family K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000364 398.0
SYD3_k127_15564_3 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000827 347.0
SYD3_k127_15564_4 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005211 248.0
SYD3_k127_15564_5 PFAM thiamine pyrophosphate K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000007297 172.0
SYD3_k127_15564_6 dna polymerase III (Chi subunit) K02339 - 2.7.7.7 0.000000000000000000000000000000000000000005522 175.0
SYD3_k127_15564_7 Protein of unknown function (DUF3106) - - - 0.00000000000000000000000122 114.0
SYD3_k127_15564_8 membrane protein domain - - - 0.000000000000000000000007084 107.0
SYD3_k127_15564_9 Protein of unknown function (DUF3619) - - - 0.0000000000000009577 84.0
SYD3_k127_1556996_0 Peptidase M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000517 324.0
SYD3_k127_1556996_1 membrane-bound metal-dependent K07038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000779 326.0
SYD3_k127_1556996_2 NAD binding K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000001878 243.0
SYD3_k127_1556996_3 Rieske-like [2Fe-2S] domain K05710,K18087 - - 0.00000000000000000000000000000000000000000001274 163.0
SYD3_k127_1560781_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1252.0
SYD3_k127_1560781_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1199.0
SYD3_k127_1560781_10 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 378.0
SYD3_k127_1560781_11 exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 325.0
SYD3_k127_1560781_12 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007459 278.0
SYD3_k127_1560781_13 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000001985 267.0
SYD3_k127_1560781_14 HAD-superfamily hydrolase, subfamily IA, variant 3 K07025 - - 0.0000000000000000000000000000000000000000000000000000000000000000005119 238.0
SYD3_k127_1560781_15 Protein of unknown function (DUF4197) - - - 0.000000000000000000000000000000000000000000000000000000000002199 215.0
SYD3_k127_1560781_16 protein conserved in bacteria K09950 - - 0.000000000000000000000000000000000000000000000000000000000005418 214.0
SYD3_k127_1560781_17 - - - - 0.000000000000000000000000000000000000000000000000000000002382 209.0
SYD3_k127_1560781_18 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000002325 205.0
SYD3_k127_1560781_19 SCO1/SenC - - - 0.00000000000000000000000000000000000000000000000001952 187.0
SYD3_k127_1560781_2 Helicase K03657 - 3.6.4.12 1.616e-312 973.0
SYD3_k127_1560781_20 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000628 162.0
SYD3_k127_1560781_21 Protein of unknown function (DUF2782) - - - 0.00000000000000000000000000000000000000696 147.0
SYD3_k127_1560781_22 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.000000000000000000000000000000000001548 147.0
SYD3_k127_1560781_23 Protein of unknown function (DUF493) K09158 - - 0.00000000000000000000000000000003698 128.0
SYD3_k127_1560781_24 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000000000001363 119.0
SYD3_k127_1560781_25 Copper chaperone PCu(A)C K09796 - - 0.000000000000000000000000001326 121.0
SYD3_k127_1560781_26 Protein of unknown function (DUF2796) - - - 0.000000000000000000000006756 109.0
SYD3_k127_1560781_27 Putative zinc-finger - - - 0.0000000003685 64.0
SYD3_k127_1560781_3 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 1.994e-201 634.0
SYD3_k127_1560781_4 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009923 533.0
SYD3_k127_1560781_5 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 504.0
SYD3_k127_1560781_6 Belongs to the peptidase S11 family K01286,K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009042 499.0
SYD3_k127_1560781_7 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 457.0
SYD3_k127_1560781_8 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004629 411.0
SYD3_k127_1560781_9 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 403.0
SYD3_k127_1566645_0 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000009316 273.0
SYD3_k127_1566645_1 Ceramidase - - - 0.0000000000000000000000000000000000000000000000001041 182.0
SYD3_k127_1566645_2 extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000001973 143.0
SYD3_k127_1566645_3 - - - - 0.000006211 52.0
SYD3_k127_1586914_0 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 307.0
SYD3_k127_1586914_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.00000000000000000000000000000000000000000000000000000000003283 206.0
SYD3_k127_159273_0 Uncharacterized protein family (UPF0051) K09014 - - 1.558e-234 734.0
SYD3_k127_159273_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003009 580.0
SYD3_k127_159273_10 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000000000000000116 165.0
SYD3_k127_159273_11 protein methyltransferase activity - - - 0.000000000001869 69.0
SYD3_k127_159273_2 Uncharacterized protein family (UPF0051) K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006638 481.0
SYD3_k127_159273_3 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 470.0
SYD3_k127_159273_4 ABC transporter K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 404.0
SYD3_k127_159273_5 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 381.0
SYD3_k127_159273_6 serine O-acetyltransferase K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 347.0
SYD3_k127_159273_7 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 345.0
SYD3_k127_159273_8 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000164 248.0
SYD3_k127_159273_9 Transcriptional regulator K13643 - - 0.0000000000000000000000000000000000000000000000000000000000000004211 222.0
SYD3_k127_1611316_0 Homospermidine synthase K00808 - 2.5.1.44 2.368e-221 694.0
SYD3_k127_1611316_1 CoA-substrate-specific enzyme activase - - - 2.814e-211 674.0
SYD3_k127_1611316_2 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000222 219.0
SYD3_k127_1619415_0 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007499 336.0
SYD3_k127_1619415_1 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002097 289.0
SYD3_k127_1619415_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000003955 98.0
SYD3_k127_1619415_3 Methyltransferase, chemotaxis proteins K00575,K13924 - 2.1.1.80,3.1.1.61 0.0000000000000003512 84.0
SYD3_k127_1624723_0 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000000000000000000004151 190.0
SYD3_k127_1624723_1 AraC-like ligand binding domain - - - 0.00000000005553 64.0
SYD3_k127_164189_0 PFAM Alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006729 446.0
SYD3_k127_164189_1 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 430.0
SYD3_k127_164189_2 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003038 280.0
SYD3_k127_164189_3 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001411 256.0
SYD3_k127_164189_4 Protein involved in outer membrane biogenesis - - - 0.0000000000000000000000000000000000000000000000002926 203.0
SYD3_k127_1649111_0 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 540.0
SYD3_k127_1649111_1 HpcH/HpaI aldolase/citrate lyase family K02510 - 4.1.2.52 0.000000000000000000000000000000000108 141.0
SYD3_k127_1653143_0 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 3.035e-286 895.0
SYD3_k127_1653143_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 3.503e-209 654.0
SYD3_k127_1670412_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895,K01907 - 6.2.1.1,6.2.1.16 9.79e-299 929.0
SYD3_k127_1670412_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 4.154e-229 718.0
SYD3_k127_1670412_10 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002499 285.0
SYD3_k127_1670412_11 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000001983 243.0
SYD3_k127_1670412_12 endonuclease III K01247 - 3.2.2.21 0.0000000000000000000000000005024 114.0
SYD3_k127_1670412_13 - - - - 0.0000000005178 66.0
SYD3_k127_1670412_14 Belongs to the short-chain dehydrogenases reductases (SDR) family K00023 - 1.1.1.36 0.0000001378 54.0
SYD3_k127_1670412_2 Poly(R)-hydroxyalkanoic acid synthase, class I K03821 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 609.0
SYD3_k127_1670412_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 573.0
SYD3_k127_1670412_4 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 529.0
SYD3_k127_1670412_5 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003511 387.0
SYD3_k127_1670412_6 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004075 376.0
SYD3_k127_1670412_7 ZIP Zinc transporter K16267 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000866 327.0
SYD3_k127_1670412_8 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009768 310.0
SYD3_k127_1670412_9 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 299.0
SYD3_k127_1689036_0 TIGRFAM malate synthase A K01638 - 2.3.3.9 1.601e-232 736.0
SYD3_k127_1689036_1 Catalyzes the reversible formation of glyoxylate and succinate from isocitrate K01637 - 4.1.3.1 5.598e-204 644.0
SYD3_k127_1689036_2 Transcriptional regulator, XRE family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 523.0
SYD3_k127_1689036_3 PFAM Xanthine uracil vitamin C permease K03458,K16345 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000582 440.0
SYD3_k127_1689036_4 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.0000000000000000000000000000000000000000000000009486 185.0
SYD3_k127_1689036_5 Hemerythrin HHE cation binding domain - - - 0.000000000001598 75.0
SYD3_k127_1700468_0 Peptidase family M20/M25/M40 - - - 6.631e-220 690.0
SYD3_k127_1700468_1 acyl-CoA dehydrogenase K00249 - 1.3.8.7 2.69e-215 672.0
SYD3_k127_1700468_2 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 507.0
SYD3_k127_1700468_3 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 0.00000000000000000000000000000000000000000000002336 175.0
SYD3_k127_171153_0 Gamma-glutamyltranspeptidase - - - 4.61e-220 696.0
SYD3_k127_171153_1 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 298.0
SYD3_k127_171153_2 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000004715 251.0
SYD3_k127_171153_3 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000207 214.0
SYD3_k127_1726078_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 1.402e-284 895.0
SYD3_k127_1726078_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 589.0
SYD3_k127_1726078_2 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000000001629 186.0
SYD3_k127_1726078_3 COG1014 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, gamma subunit K00172 - 1.2.7.1 0.0000000000000000007895 88.0
SYD3_k127_1741786_0 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009681 516.0
SYD3_k127_1741786_1 MmgE PrpD family protein - - - 0.00000111 51.0
SYD3_k127_1744889_0 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000002836 241.0
SYD3_k127_1744889_1 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000000009403 207.0
SYD3_k127_1744889_2 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000000005748 206.0
SYD3_k127_1744889_3 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000001396 203.0
SYD3_k127_1744889_4 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000004206 190.0
SYD3_k127_1762892_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000001438 179.0
SYD3_k127_17808_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 7.144e-243 764.0
SYD3_k127_17808_1 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K00997,K01207 - 2.7.8.7,3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 455.0
SYD3_k127_17808_2 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003 327.0
SYD3_k127_17808_3 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009309 286.0
SYD3_k127_17808_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000122 284.0
SYD3_k127_17808_5 cation diffusion facilitator family transporter K16264 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008301 286.0
SYD3_k127_17808_6 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009918 274.0
SYD3_k127_17808_7 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000003538 236.0
SYD3_k127_17808_8 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000000000000000005619 157.0
SYD3_k127_1814724_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 1.8e-219 686.0
SYD3_k127_1814724_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 407.0
SYD3_k127_1814724_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000003 161.0
SYD3_k127_1817269_0 Phosphoenolpyruvate phosphomutase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 320.0
SYD3_k127_1817269_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 293.0
SYD3_k127_1817269_2 FAD binding domain K13796 - - 0.0000000000000000000000000000000000000000000000002407 180.0
SYD3_k127_182128_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1236.0
SYD3_k127_182128_1 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000003261 268.0
SYD3_k127_182128_2 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000434 264.0
SYD3_k127_182128_3 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K13053,K14160 - - 0.00000000000000000000000000000000000000000000000000000005504 206.0
SYD3_k127_182128_4 Required for maturation of 30S ribosomal subunits K09748 - - 0.000000000000000000000000000000000000000000000000001513 190.0
SYD3_k127_183559_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 1.096e-229 721.0
SYD3_k127_183559_1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031,K02032,K13892 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 424.0
SYD3_k127_184632_0 Mur ligase family, catalytic domain K02558 - 6.3.2.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 308.0
SYD3_k127_184632_1 Amidase K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000001899 167.0
SYD3_k127_1848024_0 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 396.0
SYD3_k127_1848024_1 - - - - 0.0000000001017 64.0
SYD3_k127_1848024_2 - - - - 0.000000005438 59.0
SYD3_k127_18589_0 PFAM beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 335.0
SYD3_k127_18589_1 NlpB/DapX lipoprotein K07287 - - 0.00005047 47.0
SYD3_k127_1862071_0 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003682 254.0
SYD3_k127_1862071_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000001798 164.0
SYD3_k127_190889_0 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 487.0
SYD3_k127_190889_1 Quinone oxidoreductase K00001,K00344 - 1.1.1.1,1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 332.0
SYD3_k127_190889_2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000007552 59.0
SYD3_k127_1910234_0 Malate synthase K01638 - 2.3.3.9 6.401e-246 768.0
SYD3_k127_1910234_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 - - 9.943e-221 693.0
SYD3_k127_1910234_10 Phage-associated protein - - - 0.000000000000000000000000000000000000006029 153.0
SYD3_k127_1910234_11 - - - - 0.00000000000000000000000000001109 131.0
SYD3_k127_1910234_12 Staphylococcal nuclease homologues - - - 0.00000000000000000000004654 99.0
SYD3_k127_1910234_13 - - - - 0.000000000000000000002217 98.0
SYD3_k127_1910234_14 - - - - 0.000000000000002989 89.0
SYD3_k127_1910234_15 - - - - 0.00001436 49.0
SYD3_k127_1910234_16 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K22015 - 1.17.1.9,1.17.99.7 0.0008741 42.0
SYD3_k127_1910234_2 GGDEF domain - - - 8.421e-194 634.0
SYD3_k127_1910234_3 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004937 520.0
SYD3_k127_1910234_4 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003906 393.0
SYD3_k127_1910234_5 GHKL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 323.0
SYD3_k127_1910234_6 Adenylate cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 296.0
SYD3_k127_1910234_7 Bacterial protein of unknown function (DUF898) - - - 0.00000000000000000000000000000000000000000000000000000000000000000006993 248.0
SYD3_k127_1910234_8 COG0501 Zn-dependent protease with chaperone function - - - 0.00000000000000000000000000000000000000000000000000000000000000006057 234.0
SYD3_k127_1910234_9 response regulator - - - 0.000000000000000000000000000000000000000000000000000001226 198.0
SYD3_k127_1912273_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1090.0
SYD3_k127_1912273_1 6-phosphogluconate dehydrogenase K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000984 310.0
SYD3_k127_1912516_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1027.0
SYD3_k127_1912516_1 Belongs to the UbiD family K03182,K16874 - 4.1.1.98 8.098e-278 862.0
SYD3_k127_1912516_10 PFAM binding-protein-dependent transport systems inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008969 350.0
SYD3_k127_1912516_11 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003524 346.0
SYD3_k127_1912516_12 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 339.0
SYD3_k127_1912516_13 ABC transporter, phosphonate, periplasmic substrate-binding protein K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 334.0
SYD3_k127_1912516_14 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007554 322.0
SYD3_k127_1912516_15 ATPases associated with a variety of cellular activities K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 289.0
SYD3_k127_1912516_16 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005831 286.0
SYD3_k127_1912516_17 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002282 280.0
SYD3_k127_1912516_18 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186,K16875 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000003465 278.0
SYD3_k127_1912516_19 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003123 256.0
SYD3_k127_1912516_2 PFAM binding-protein-dependent transport systems inner membrane component K02011 - - 1.267e-229 724.0
SYD3_k127_1912516_20 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000000000000000000000000000002514 224.0
SYD3_k127_1912516_21 Glyoxalase-like domain - - - 0.00000000000000000000000000000000000000000000000000000000006996 210.0
SYD3_k127_1912516_22 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000287 205.0
SYD3_k127_1912516_23 FCD - - - 0.00000000000000000000000000000000000000000000000000000009327 205.0
SYD3_k127_1912516_24 Belongs to the UPF0434 family K09791 - - 0.000000000000000000000000038 108.0
SYD3_k127_1912516_25 membrane transporter protein K07090 - - 0.00000000000000000001239 101.0
SYD3_k127_1912516_26 - - - - 0.000000000000742 72.0
SYD3_k127_1912516_27 membrane transporter protein K07090 - - 0.00000000004517 72.0
SYD3_k127_1912516_3 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 1.627e-220 694.0
SYD3_k127_1912516_4 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 4.472e-201 633.0
SYD3_k127_1912516_5 Zinc-binding dehydrogenase K00001 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 533.0
SYD3_k127_1912516_6 PFAM AMP-dependent synthetase and ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 492.0
SYD3_k127_1912516_7 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000624 477.0
SYD3_k127_1912516_8 Aldo/keto reductase family K05882 - 1.1.1.91 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 449.0
SYD3_k127_1912516_9 TOBE domain K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009725 432.0
SYD3_k127_1933836_0 Protein conserved in bacteria - - - 5.239e-205 648.0
SYD3_k127_1933836_1 phosphosulfolactate synthase activity K08097 - 4.4.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000623 327.0
SYD3_k127_1933836_2 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 320.0
SYD3_k127_1933836_3 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006699 321.0
SYD3_k127_1933836_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003088 273.0
SYD3_k127_1933836_5 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K19802 - 5.1.1.20 0.000000000000000000000000000000000000000000000000745 192.0
SYD3_k127_1933836_6 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000005886 72.0
SYD3_k127_1933836_7 Amidase K02433 - 6.3.5.6,6.3.5.7 0.0000000008538 62.0
SYD3_k127_1933836_8 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000003413 61.0
SYD3_k127_1937375_0 geranylgeranyl reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 381.0
SYD3_k127_1937375_1 Encapsulating protein for peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 323.0
SYD3_k127_1937375_2 Evidence 4 Homologs of previously reported genes of K09700 - - 0.00000000000000000000000000000000000005643 148.0
SYD3_k127_1937375_3 PRC-barrel domain - - - 0.000009437 57.0
SYD3_k127_197759_0 HpcH/HpaI aldolase/citrate lyase family K08691 - 4.1.3.24,4.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 479.0
SYD3_k127_197759_1 Membrane transport protein K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007546 384.0
SYD3_k127_197759_2 dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004861 322.0
SYD3_k127_197759_3 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000854 295.0
SYD3_k127_197759_4 PFAM D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain, D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015,K00090 - 1.1.1.215,1.1.1.26,1.1.1.79,1.1.1.81 0.0000000000000000000000000000000000000000000000000000000000001236 216.0
SYD3_k127_197759_5 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000001996 176.0
SYD3_k127_197759_6 HIT domain K02503 - - 0.000000000000000000000000000000000000000008597 155.0
SYD3_k127_197759_7 Phasin protein - - - 0.0000000000000000000000000001473 123.0
SYD3_k127_1994320_0 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 428.0
SYD3_k127_1994320_1 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 422.0
SYD3_k127_1994320_2 Cytochrome c bacterial - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 368.0
SYD3_k127_1994320_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001641 247.0
SYD3_k127_1994320_4 Belongs to the aldehyde dehydrogenase family - - - 0.0000000000000000000000000000000000000000000001745 171.0
SYD3_k127_2001353_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822,K00833 - 2.6.1.18,2.6.1.62 4.469e-213 670.0
SYD3_k127_2001353_1 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 563.0
SYD3_k127_2001353_2 Polysaccharide deacetylase K22278 - 3.5.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 400.0
SYD3_k127_2001353_3 'ABC-type proline glycine betaine transport K05847 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000626 299.0
SYD3_k127_2001353_4 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.0000179 51.0
SYD3_k127_201839_0 endonuclease III K01247 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 322.0
SYD3_k127_201839_1 Oxidoreductase NAD-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000002769 212.0
SYD3_k127_201839_2 Rnk N-terminus K06140 - - 0.0000000000000000000000000005866 119.0
SYD3_k127_201839_4 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0003132 49.0
SYD3_k127_2037214_0 Secretin and TonB N terminus short domain K02453 - - 3.228e-217 693.0
SYD3_k127_2037214_1 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000000000000000000000000000000000000009856 216.0
SYD3_k127_2037214_2 Type II secretory pathway pseudopilin - - - 0.0000000000000000000000000000000000000000000000002473 182.0
SYD3_k127_2037214_3 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000000000000001031 155.0
SYD3_k127_2037214_4 carbon utilization - - - 0.00000000000000000007487 98.0
SYD3_k127_2037214_5 - - - - 0.00000000000004383 79.0
SYD3_k127_2037214_6 - - - - 0.00000000000005977 74.0
SYD3_k127_2064826_0 MlaD protein K02067 - - 0.0000000000000000000000000000000000000003891 160.0
SYD3_k127_2064826_1 ABC-type transport auxiliary lipoprotein component K18480 - - 0.000000000000000000000000000001471 130.0
SYD3_k127_2064826_2 KR domain K00065 - 1.1.1.127 0.000000000000000000001223 104.0
SYD3_k127_2109398_0 Nitrogen metabolism transcriptional regulator, NtrC, Fis Family K07712 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0043565,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002849 264.0
SYD3_k127_2109398_1 SMART ATP-binding region ATPase domain protein K07708 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000002427 214.0
SYD3_k127_211605_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.493e-223 699.0
SYD3_k127_211605_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 522.0
SYD3_k127_211605_10 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008301 248.0
SYD3_k127_211605_11 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003898 238.0
SYD3_k127_211605_12 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.0000000000000000000000000000000000000000000000000000000000000000137 227.0
SYD3_k127_211605_13 Ribosomal protein L17 K02879 - - 0.00000000000000000000000000000000000000000000000000000000000001057 217.0
SYD3_k127_211605_14 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.000000000000000000000000000000000000000000000000000000000001308 211.0
SYD3_k127_211605_15 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A K02876 - - 0.0000000000000000000000000000000000000000000000000000002588 198.0
SYD3_k127_211605_16 Involved in the binding of tRNA to the ribosomes K02946 - - 0.000000000000000000000000000000000000000000000000000001464 192.0
SYD3_k127_211605_17 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000002904 187.0
SYD3_k127_211605_18 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.00000000000000000000000000000000000000000000000006304 179.0
SYD3_k127_211605_19 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000000000000000000000002251 172.0
SYD3_k127_211605_2 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004487 458.0
SYD3_k127_211605_20 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.000000000000000000000000000000000000000000001976 169.0
SYD3_k127_211605_21 D-alanyl-D-alanine carboxypeptidase - - - 0.000000000000000000000000000000000000000000003694 169.0
SYD3_k127_211605_22 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000000000000000000000000000905 161.0
SYD3_k127_211605_23 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000000000001793 143.0
SYD3_k127_211605_24 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000000004063 145.0
SYD3_k127_211605_25 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000000000000000000000000000000002669 152.0
SYD3_k127_211605_26 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000000000000002358 133.0
SYD3_k127_211605_27 Ribosomal protein L30p/L7e K02907 - - 0.0000000000000000000009558 96.0
SYD3_k127_211605_28 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.000000000000000009972 85.0
SYD3_k127_211605_29 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000001028 79.0
SYD3_k127_211605_3 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003023 381.0
SYD3_k127_211605_30 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000000001013 71.0
SYD3_k127_211605_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 342.0
SYD3_k127_211605_5 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 331.0
SYD3_k127_211605_6 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003138 305.0
SYD3_k127_211605_7 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 299.0
SYD3_k127_211605_8 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005659 284.0
SYD3_k127_211605_9 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008784 254.0
SYD3_k127_212074_0 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K03852 - 2.3.3.15 1.214e-271 846.0
SYD3_k127_212074_1 GMC oxidoreductase K00108 - 1.1.99.1 1.369e-259 809.0
SYD3_k127_212074_10 Sulfatase K01133 - 3.1.6.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 324.0
SYD3_k127_212074_11 HemX, putative uroporphyrinogen-III C-methyltransferase K02496,K13543 - 2.1.1.107,4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000352 316.0
SYD3_k127_212074_12 Forkhead associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007171 307.0
SYD3_k127_212074_13 LytTr DNA-binding domain K08083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 301.0
SYD3_k127_212074_14 uroporphyrinogen III synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000003791 269.0
SYD3_k127_212074_15 - - - - 0.000000000000000000000000000000000000000000000000000781 191.0
SYD3_k127_212074_16 HemY protein N-terminus K02498 - - 0.000000000000000000000000000000000000000000001544 176.0
SYD3_k127_212074_2 Protein tyrosine kinase K12132 - 2.7.11.1 2.948e-234 753.0
SYD3_k127_212074_3 argininosuccinate lyase K01755 - 4.3.2.1 1.77e-213 691.0
SYD3_k127_212074_4 Iron-containing alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 545.0
SYD3_k127_212074_5 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 414.0
SYD3_k127_212074_6 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006424 379.0
SYD3_k127_212074_7 PFAM Fructosamine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 335.0
SYD3_k127_212074_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007201 332.0
SYD3_k127_212074_9 Transcriptional regulator K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007273 334.0
SYD3_k127_213585_0 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000003069 132.0
SYD3_k127_213585_1 FRG - - - 0.00000000000000000000000000000004435 136.0
SYD3_k127_213585_2 Putative esterase - - - 0.000000000000000000000001351 104.0
SYD3_k127_2139983_0 Belongs to the IlvD Edd family K01687,K22186 - 4.2.1.82,4.2.1.9 9.683e-283 877.0
SYD3_k127_2139983_1 COG0471 Di- and tricarboxylate transporters - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007535 388.0
SYD3_k127_2139983_2 HpcH/HpaI aldolase/citrate lyase family K02510 - 4.1.2.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009119 322.0
SYD3_k127_2139983_3 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000004481 186.0
SYD3_k127_2142599_0 Vitamin B12 dependent methionine synthase activation region K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 548.0
SYD3_k127_2142599_1 Phytanoyl-CoA dioxygenase (PhyH) K00477 - 1.14.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 286.0
SYD3_k127_2142599_2 CAAX amino Terminal protease family protein K07052 - - 0.000000000000000000000000000000000000000000000000000001778 203.0
SYD3_k127_2142599_3 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 0.0007807 45.0
SYD3_k127_2146381_0 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000008917 166.0
SYD3_k127_2146381_1 Belongs to the TPP enzyme family K01576 - 4.1.1.7 0.00000000000000000000000000000000000000003641 168.0
SYD3_k127_220602_0 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004913 364.0
SYD3_k127_220602_1 Iron-containing redox enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007817 313.0
SYD3_k127_220602_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000002652 223.0
SYD3_k127_220602_3 PFAM AMP-dependent synthetase and ligase - - - 0.000000000000000000000000000000000000000006433 157.0
SYD3_k127_2245217_0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 310.0
SYD3_k127_2245217_1 - - - - 0.00000000000000000000000000000000000000000000001468 180.0
SYD3_k127_2247572_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 605.0
SYD3_k127_2247572_1 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 553.0
SYD3_k127_2247572_2 RNA polymerase sigma factor K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004602 335.0
SYD3_k127_2247572_3 MucB/RseB C-terminal domain K03598 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005259 281.0
SYD3_k127_2247572_4 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0000000000000000000000008618 104.0
SYD3_k127_2247572_5 PFAM Anti sigma-E protein RseA family protein K03597 - - 0.0000000000000000000004739 102.0
SYD3_k127_2247572_6 Glutaredoxin-like domain (DUF836) K00384 - 1.8.1.9 0.000000000000003968 79.0
SYD3_k127_233619_0 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 505.0
SYD3_k127_233619_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 318.0
SYD3_k127_233619_10 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000001647 151.0
SYD3_k127_233619_11 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000000000000003056 134.0
SYD3_k127_233619_12 PFAM Sporulation domain protein - - - 0.000000000000000000000000000000006789 136.0
SYD3_k127_233619_13 Belongs to the peptidase S51 family K05995 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 3.4.13.21 0.000000008293 61.0
SYD3_k127_233619_14 - - - - 0.00002192 53.0
SYD3_k127_233619_2 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 296.0
SYD3_k127_233619_3 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 299.0
SYD3_k127_233619_4 LppC putative lipoprotein K07121 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003974 260.0
SYD3_k127_233619_5 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K21345 - 2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000005665 233.0
SYD3_k127_233619_6 periplasmic or secreted lipoprotein - - - 0.000000000000000000000000000000000000000000000000000000003957 207.0
SYD3_k127_233619_7 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K01947,K03525 - 2.7.1.33,6.3.4.15 0.00000000000000000000000000000000000000000000000000000005934 204.0
SYD3_k127_233619_8 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides K07232 - - 0.000000000000000000000000000000000000000000000000007762 190.0
SYD3_k127_233619_9 - - - - 0.000000000000000000000000000000000000000000000000009251 188.0
SYD3_k127_235664_0 D-isomer specific 2-hydroxyacid dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004643 385.0
SYD3_k127_235664_1 Domain of unknown function (DUF1932) - - - 0.0000000000000000000000000000000000000000000000000000000000000000004089 242.0
SYD3_k127_235664_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000003655 142.0
SYD3_k127_2359475_0 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003289 271.0
SYD3_k127_2359475_1 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000412 220.0
SYD3_k127_2359475_2 - - - - 0.000000002466 61.0
SYD3_k127_2359475_3 Tripartite tricarboxylate transporter family receptor - - - 0.000008758 48.0
SYD3_k127_2361555_0 PFAM Transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004202 388.0
SYD3_k127_2361555_1 4-hydroxy-2-oxovalerate aldolase - - - 0.000000000000000000000000000000007194 131.0
SYD3_k127_2361555_2 Belongs to the malate synthase family K01638 - 2.3.3.9 0.000000001123 61.0
SYD3_k127_2366106_0 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 0.00000000000000000000000000000000000000000000000006302 183.0
SYD3_k127_2366106_1 Domain of unknown function (DUF4124) - - - 0.0000102 55.0
SYD3_k127_238979_0 abc transporter K02003,K05685 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005564 331.0
SYD3_k127_238979_1 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000003587 242.0
SYD3_k127_238979_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005,K13888 - - 0.00002578 47.0
SYD3_k127_239939_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 494.0
SYD3_k127_239939_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 387.0
SYD3_k127_239939_2 Belongs to the Nudix hydrolase family. NudC subfamily K03426 - 3.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005259 285.0
SYD3_k127_2521088_0 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000424 462.0
SYD3_k127_2521088_1 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 303.0
SYD3_k127_2521088_2 Tripartite tricarboxylate transporter family receptor K07795 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005 258.0
SYD3_k127_2521088_3 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.00000000000000000000000000000000000000000000000000000000001152 209.0
SYD3_k127_2537787_0 L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006319 334.0
SYD3_k127_2537787_1 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000939 284.0
SYD3_k127_2564946_0 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000529 333.0
SYD3_k127_2564946_1 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.0000000000000000000000000000000002428 139.0
SYD3_k127_2564946_2 protein involved in tolerance to divalent cations K03926 - - 0.000000000000000000000000000001313 123.0
SYD3_k127_268284_0 Radical SAM K09711 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 295.0
SYD3_k127_268284_1 P-aminobenzoate N-oxygenase AurF - - - 0.0000000000000000000004524 103.0
SYD3_k127_2730946_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002912 548.0
SYD3_k127_2730946_1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07689,K07690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006391 279.0
SYD3_k127_2730946_2 Hemerythrin HHE cation binding domain - - - 0.00003922 47.0
SYD3_k127_2733264_0 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781 - 5.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007881 409.0
SYD3_k127_2733264_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 402.0
SYD3_k127_2733264_2 4Fe-4S ferredoxin, iron-sulfur binding K18929 - - 0.00000000000000000000000000000000001573 138.0
SYD3_k127_2733264_3 Cysteine-rich domain K18928 - - 0.000000000000000000004591 93.0
SYD3_k127_2756256_0 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.0 1276.0
SYD3_k127_2756256_1 4Fe-4S ferredoxin, iron-sulfur binding K00124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 405.0
SYD3_k127_2756256_2 formate dehydrogenase K00127 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 383.0
SYD3_k127_2756256_3 C4-dicarboxylate ABC transporter permease - - - 0.00000000000000000000000000000000000000000000000000000000000002301 222.0
SYD3_k127_2756256_4 - - - - 0.0000000000000004557 88.0
SYD3_k127_2758919_0 Ammonium Transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005626 561.0
SYD3_k127_2765412_0 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000001502 164.0
SYD3_k127_2765412_1 FAD binding domain K13796 - - 0.0000000000000000000000000000000000000003662 154.0
SYD3_k127_2768991_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005726 578.0
SYD3_k127_2768991_1 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008649 368.0
SYD3_k127_2768991_10 Composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism K02160 - - 0.0000000000000007703 81.0
SYD3_k127_2768991_2 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 334.0
SYD3_k127_2768991_3 ATP dependent DNA ligase C terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 309.0
SYD3_k127_2768991_4 Reversible hydration of carbon dioxide K01673 GO:0003674,GO:0003824,GO:0004089,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008270,GO:0015976,GO:0016829,GO:0016835,GO:0016836,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002861 301.0
SYD3_k127_2768991_5 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.00000000000000000000000000000000000000000000000000000000000001186 218.0
SYD3_k127_2768991_6 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000002962 182.0
SYD3_k127_2768991_7 Methyltransferase domain - - - 0.000000000000000000000000000000000004798 141.0
SYD3_k127_2768991_8 - - - - 0.000000000000000000000000005828 122.0
SYD3_k127_2768991_9 PFAM 17 kDa surface antigen - - - 0.000000000000000000000005796 107.0
SYD3_k127_2772440_0 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000003948 220.0
SYD3_k127_2772440_1 ABC-type uncharacterized transport system - - - 0.0000000000000000000000000000000000000000000002358 177.0
SYD3_k127_2777808_0 ATPase associated with various cellular activities, AAA_5 K04748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007161 243.0
SYD3_k127_2777808_1 FAD dependent oxidoreductase - - - 0.0000000000001315 78.0
SYD3_k127_2777808_2 4Fe-4S dicluster domain - - - 0.000000000001003 72.0
SYD3_k127_2790510_0 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 508.0
SYD3_k127_2790510_1 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 370.0
SYD3_k127_2790510_2 pyridoxamine 5-phosphate K07006 - - 0.000000000000000000000000000000000000000000000000000000000000000001166 237.0
SYD3_k127_2790510_3 OsmC-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000003101 229.0
SYD3_k127_2790510_4 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000000000000000000000000000000000000000000000000001565 225.0
SYD3_k127_2791309_0 DNA ligase K01971 - 6.5.1.1 0.0 1245.0
SYD3_k127_2791309_1 Zinc-binding dehydrogenase K00121 - 1.1.1.1,1.1.1.284 7.058e-208 649.0
SYD3_k127_2791309_10 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009603 257.0
SYD3_k127_2791309_11 KR domain - - - 0.0000000000000000000000000000000000000000000002404 176.0
SYD3_k127_2791309_12 KR domain K00059 - 1.1.1.100 0.00000000000000000000001388 105.0
SYD3_k127_2791309_2 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002575 424.0
SYD3_k127_2791309_3 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006351 389.0
SYD3_k127_2791309_4 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008328 372.0
SYD3_k127_2791309_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006493 338.0
SYD3_k127_2791309_6 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006731 321.0
SYD3_k127_2791309_7 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001199 280.0
SYD3_k127_2791309_8 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001781 264.0
SYD3_k127_2791309_9 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004676 269.0
SYD3_k127_2795489_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1414.0
SYD3_k127_2795489_1 FtsX-like permease family K02004 - - 6.641e-242 775.0
SYD3_k127_2795489_10 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008128 342.0
SYD3_k127_2795489_11 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 344.0
SYD3_k127_2795489_12 alpha beta K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009981 332.0
SYD3_k127_2795489_13 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008852 296.0
SYD3_k127_2795489_14 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 297.0
SYD3_k127_2795489_15 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004836 283.0
SYD3_k127_2795489_16 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001407 255.0
SYD3_k127_2795489_17 PFAM Aminotransferase class I and II K14261 - - 0.00000000000000000000000000000000000000000000002463 171.0
SYD3_k127_2795489_2 homoserine dehydrogenase K00003 - 1.1.1.3 4.925e-221 692.0
SYD3_k127_2795489_21 Belongs to the glutamate synthase family - - - 0.0009656 49.0
SYD3_k127_2795489_3 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 646.0
SYD3_k127_2795489_4 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 572.0
SYD3_k127_2795489_5 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005425 520.0
SYD3_k127_2795489_6 Lipocalin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 391.0
SYD3_k127_2795489_7 Taurine catabolism dioxygenase TauD, TfdA family K06912 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000713 387.0
SYD3_k127_2795489_8 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 384.0
SYD3_k127_2795489_9 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 353.0
SYD3_k127_279766_0 SMART PUA domain containing protein K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 456.0
SYD3_k127_279766_1 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005636 369.0
SYD3_k127_279766_2 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000000003298 119.0
SYD3_k127_2799691_0 SNARE associated Golgi protein - - - 5.139e-307 967.0
SYD3_k127_2799691_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 8.911e-300 930.0
SYD3_k127_2799691_10 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 413.0
SYD3_k127_2799691_11 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 365.0
SYD3_k127_2799691_12 GTP cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009393 329.0
SYD3_k127_2799691_13 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 289.0
SYD3_k127_2799691_14 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000136 267.0
SYD3_k127_2799691_15 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000136 248.0
SYD3_k127_2799691_16 PFAM 20S proteasome, A and B subunits - - - 0.00000000000000000000000000000000000000000000000000000000000001528 224.0
SYD3_k127_2799691_17 Belongs to the ClpA ClpB family K03694 - - 0.0000000000000000000000000000000000000000000000000000000000003366 213.0
SYD3_k127_2799691_18 gag-polyprotein putative aspartyl protease K06985 - - 0.0000000000000000000000000000000000000000000000000006896 196.0
SYD3_k127_2799691_19 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.00000000000000000000000000000000000000000000002939 179.0
SYD3_k127_2799691_2 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 3.364e-214 670.0
SYD3_k127_2799691_20 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000000000000002443 150.0
SYD3_k127_2799691_21 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000000000000005297 115.0
SYD3_k127_2799691_22 Cytochrome c, class I - - - 0.0000000000000000000008213 106.0
SYD3_k127_2799691_23 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000000000002124 85.0
SYD3_k127_2799691_3 PFAM Rieske 2Fe-2S K00499 - 1.14.15.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003493 578.0
SYD3_k127_2799691_4 PFAM aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004567 548.0
SYD3_k127_2799691_5 sulfide dehydrogenase K05301 - 1.8.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 532.0
SYD3_k127_2799691_6 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 512.0
SYD3_k127_2799691_7 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002795 476.0
SYD3_k127_2799691_8 PFAM Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006278 471.0
SYD3_k127_2799691_9 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002136 471.0
SYD3_k127_2805584_0 NMT1-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 444.0
SYD3_k127_2805584_1 Putative serine dehydratase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 383.0
SYD3_k127_2805584_2 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.000000000000000000000000000002526 126.0
SYD3_k127_2817497_0 ATP-grasp - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 379.0
SYD3_k127_2817497_1 protein conserved in bacteria K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001476 269.0
SYD3_k127_2817497_2 2-phosphosulfolactate phosphatase activity K05979 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 3.1.3.71 0.000000000000000000000000000000000000000000000000000000000000000000005137 243.0
SYD3_k127_2817497_3 Cyanophycin synthetase K03802 - 6.3.2.29,6.3.2.30 0.000000000000000000000000000000000000003558 163.0
SYD3_k127_2817497_4 (2R)-phospho-3-sulfolactate synthase (ComA) K08097 - 4.4.1.19 0.000000002081 59.0
SYD3_k127_2817497_5 Methyltransferase type 11 - - - 0.0009931 50.0
SYD3_k127_2831116_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 511.0
SYD3_k127_2843874_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 454.0
SYD3_k127_2843874_1 PFAM histone deacetylase superfamily K04768 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 392.0
SYD3_k127_2843874_2 luciferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 351.0
SYD3_k127_2843874_3 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K03601,K04564 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0044237,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 1.15.1.1,3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 313.0
SYD3_k127_2843874_4 protein-L-isoaspartate O-methyltransferase K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000001233 256.0
SYD3_k127_2843874_5 Urate oxidase N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000001806 228.0
SYD3_k127_2843874_6 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000000000002497 130.0
SYD3_k127_2843874_7 thiolester hydrolase activity - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000192 109.0
SYD3_k127_2843874_8 PFAM PsiF repeat protein - - - 0.0000000000000000000426 94.0
SYD3_k127_2854886_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 431.0
SYD3_k127_2854886_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015 - 1.1.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 369.0
SYD3_k127_2854886_2 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 GO:0000003,GO:0001655,GO:0001822,GO:0001889,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004457,GO:0004611,GO:0004613,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006066,GO:0006071,GO:0006082,GO:0006089,GO:0006090,GO:0006091,GO:0006094,GO:0006109,GO:0006111,GO:0006113,GO:0006139,GO:0006163,GO:0006464,GO:0006629,GO:0006631,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007028,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007296,GO:0007610,GO:0008150,GO:0008152,GO:0008906,GO:0009056,GO:0009058,GO:0009062,GO:0009117,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009179,GO:0009185,GO:0009199,GO:0009205,GO:0009259,GO:0009410,GO:0009605,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010646,GO:0010647,GO:0010675,GO:0010906,GO:0014070,GO:0014074,GO:0015036,GO:0015980,GO:0016042,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016054,GO:0016301,GO:0016310,GO:0016491,GO:0016614,GO:0016651,GO:0016667,GO:0016668,GO:0016740,GO:0016772,GO:0016773,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017001,GO:0017144,GO:0018130,GO:0018991,GO:0019098,GO:0019222,GO:0019249,GO:0019318,GO:0019319,GO:0019320,GO:0019362,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019516,GO:0019538,GO:0019541,GO:0019543,GO:0019563,GO:0019626,GO:0019637,GO:0019659,GO:0019660,GO:0019661,GO:0019666,GO:0019674,GO:0019693,GO:0019751,GO:0019752,GO:0019953,GO:0022412,GO:0022414,GO:0023051,GO:0023056,GO:0030145,GO:0030154,GO:0030703,GO:0030855,GO:0031323,GO:0031667,GO:0031960,GO:0031974,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032868,GO:0032869,GO:0032870,GO:0033993,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035690,GO:0036211,GO:0042221,GO:0042493,GO:0042594,GO:0042737,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043412,GO:0043434,GO:0043436,GO:0043687,GO:0043900,GO:0043903,GO:0043949,GO:0043950,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044267,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045471,GO:0046031,GO:0046034,GO:0046164,GO:0046174,GO:0046364,GO:0046365,GO:0046394,GO:0046395,GO:0046434,GO:0046459,GO:0046483,GO:0046496,GO:0046677,GO:0046683,GO:0046700,GO:0046872,GO:0046914,GO:0047134,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048545,GO:0048562,GO:0048568,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048646,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051186,GO:0051384,GO:0051591,GO:0051704,GO:0051716,GO:0055086,GO:0055114,GO:0060429,GO:0061005,GO:0061008,GO:0062012,GO:0065007,GO:0070013,GO:0070365,GO:0070887,GO:0071236,GO:0071310,GO:0071361,GO:0071375,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071466,GO:0071495,GO:0071548,GO:0071549,GO:0071704,GO:0071840,GO:0072001,GO:0072071,GO:0072329,GO:0072330,GO:0072521,GO:0072524,GO:0080090,GO:0097159,GO:0097237,GO:0097305,GO:0097306,GO:0097327,GO:1901135,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1901617,GO:1901652,GO:1901653,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902531,GO:1902533 4.1.1.32 0.0000000000000000004082 88.0
SYD3_k127_2854886_3 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0006373 44.0
SYD3_k127_2856957_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004259 306.0
SYD3_k127_2856957_1 Cytochrome c mono- and diheme variants - - - 0.000000000000000000001394 97.0
SYD3_k127_2863019_0 Acyl-CoA dehydrogenase, middle domain K00252 - 1.3.8.6 1.717e-204 642.0
SYD3_k127_2863019_1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 601.0
SYD3_k127_2863019_2 Threonine dehydratase K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 501.0
SYD3_k127_2863019_3 CoA binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004396 333.0
SYD3_k127_2863019_4 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 329.0
SYD3_k127_2863019_5 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000001851 166.0
SYD3_k127_2863019_6 Proline dehydrogenase K13821 - 1.2.1.88,1.5.5.2 0.00008585 53.0
SYD3_k127_2868057_0 MmgE PrpD family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 505.0
SYD3_k127_2868057_1 Phosphoenolpyruvate phosphomutase - - - 0.000000000000000000000000000000000000000000000005951 175.0
SYD3_k127_2873046_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1357.0
SYD3_k127_2873046_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004983 548.0
SYD3_k127_2873046_10 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.0000000000000000003987 88.0
SYD3_k127_2873046_11 Protein of unknown function (DUF721) - - - 0.000000003794 65.0
SYD3_k127_2873046_12 - - - - 0.00000001284 57.0
SYD3_k127_2873046_2 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006701 476.0
SYD3_k127_2873046_3 Protein of unknown function (DUF815) K06923 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006576 394.0
SYD3_k127_2873046_4 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 378.0
SYD3_k127_2873046_5 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 335.0
SYD3_k127_2873046_6 peptidase K08259 - 3.4.24.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 316.0
SYD3_k127_2873046_7 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000001656 241.0
SYD3_k127_2873046_8 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000000000000003747 209.0
SYD3_k127_2873046_9 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000003784 90.0
SYD3_k127_2883813_0 gamma-glutamyltransferase K00681 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006082,GO:0006508,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0019538,GO:0019752,GO:0030288,GO:0030313,GO:0031975,GO:0034722,GO:0036374,GO:0042597,GO:0043094,GO:0043102,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070011,GO:0071704,GO:0097264,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 510.0
SYD3_k127_2884661_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006046 445.0
SYD3_k127_2884661_1 Rhodanese Homology Domain K06917 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007844 418.0
SYD3_k127_2884661_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 293.0
SYD3_k127_2884661_3 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002605 265.0
SYD3_k127_2884661_4 PFAM lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000001338 244.0
SYD3_k127_2890119_0 RNA polymerase sigma factor K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000415 399.0
SYD3_k127_2890119_1 Uncharacterized protein conserved in bacteria (DUF2219) - - - 0.000000000000000000000000000000001776 147.0
SYD3_k127_2904319_0 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 316.0
SYD3_k127_2904319_1 Tripartite tricarboxylate transporter family receptor K07795 - - 0.0000000000000000000000000000000006959 133.0
SYD3_k127_2904319_2 EamA-like transporter family - - - 0.00000000000000000000001268 103.0
SYD3_k127_2906792_0 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009755 295.0
SYD3_k127_2906792_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 287.0
SYD3_k127_2906792_2 Domain of unknown function DUF108 K06989 - 1.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000007601 258.0
SYD3_k127_2906792_3 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000001284 218.0
SYD3_k127_2906792_4 XdhC Rossmann domain K07402 - - 0.00000000000000000000000000001577 119.0
SYD3_k127_2913127_0 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001197 265.0
SYD3_k127_2913127_1 Isochorismatase family - - - 0.00000000000000000004821 102.0
SYD3_k127_2913127_2 Amidohydrolase - - - 0.00000002203 57.0
SYD3_k127_2913333_0 Prolyl oligopeptidase family - - - 0.0000000000000000000000000000001383 134.0
SYD3_k127_2923622_0 Exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 619.0
SYD3_k127_2923622_1 signal-transduction protein containing cAMP-binding and CBS domains K07182 - - 0.00000000000000000000000000000000000000000000000000000000008704 211.0
SYD3_k127_2923622_2 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000001822 136.0
SYD3_k127_2934918_0 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 472.0
SYD3_k127_2934918_1 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005821 412.0
SYD3_k127_2934918_2 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00018,K00058,K03778 - 1.1.1.28,1.1.1.29,1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 368.0
SYD3_k127_2934918_3 oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000008791 223.0
SYD3_k127_2934918_4 HIT domain K02503 - - 0.0000000000000000000251 90.0
SYD3_k127_294075_0 PFAM isocitrate isopropylmalate dehydrogenase K00030,K07246 - 1.1.1.41,1.1.1.83,1.1.1.93,4.1.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 367.0
SYD3_k127_294075_1 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.000000000000000001023 89.0
SYD3_k127_294270_0 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01577,K01652,K03852 - 2.2.1.6,2.3.3.15,4.1.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 421.0
SYD3_k127_294270_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004985 251.0
SYD3_k127_2948771_0 PFAM mannose-6-phosphate isomerase, type II K00971,K16011 - 2.7.7.13,5.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000725 597.0
SYD3_k127_2948771_1 PFAM sugar transferase K03606 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007343 454.0
SYD3_k127_2948771_2 polysaccharide export protein K01991 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001147 255.0
SYD3_k127_2948771_3 Trypsin K04771,K04772 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000006541 229.0
SYD3_k127_2948771_4 TIGRFAM exopolysaccharide biosynthesis operon protein EpsL - - - 0.00000000000000000000000000000000000000000000002634 186.0
SYD3_k127_2951247_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 619.0
SYD3_k127_2951247_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 0.000000000000000000000000000000000000000000000001123 184.0
SYD3_k127_29730_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004605 503.0
SYD3_k127_29730_1 Belongs to the DnaA family K10763 - - 0.0000000000000000000000000000000000000000000000000000000004079 210.0
SYD3_k127_29730_2 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000008215 183.0
SYD3_k127_29730_3 HAD-superfamily subfamily IB hydrolase, TIGR01490 - - - 0.00000000000000000000000000000000006478 139.0
SYD3_k127_2981101_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000000000000000000000000001126 243.0
SYD3_k127_2981101_1 surface antigen K07278 - - 0.0000000000000000000000000000000000000000000000002186 178.0
SYD3_k127_2982226_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 405.0
SYD3_k127_2982226_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 289.0
SYD3_k127_2982226_2 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 298.0
SYD3_k127_2982226_3 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000001332 194.0
SYD3_k127_2982226_4 TIGRFAM 2-hydroxy-3-oxopropionate reductase K00042 - 1.1.1.60 0.0000000000000000000000000000000000000000000001017 181.0
SYD3_k127_2982226_5 Membrane - - - 0.000000000000000000000000000000000003851 143.0
SYD3_k127_298506_0 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000004709 187.0
SYD3_k127_298506_1 Conserved hypothetical protein (Lin0512_fam) - - - 0.00000000000000000000000000000000000000000000113 171.0
SYD3_k127_298506_2 Conserved hypothetical protein (Lin0512_fam) - - - 0.00000000000000000000000000000000000000001584 156.0
SYD3_k127_298506_3 protein conserved in bacteria - - - 0.000000000000000000000000000000177 128.0
SYD3_k127_298506_4 Acyl-CoA dehydrogenase, C-terminal domain K06446 - - 0.0000000000000000000001134 106.0
SYD3_k127_3001195_0 Metallopeptidase family M24 - - - 7.82e-196 619.0
SYD3_k127_3001195_1 MmgE PrpD family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007624 574.0
SYD3_k127_3001195_10 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 322.0
SYD3_k127_3001195_11 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000392 305.0
SYD3_k127_3001195_12 Rhodanese Homology Domain K01011 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000407 246.0
SYD3_k127_3001195_13 UPF0056 inner membrane protein K05595 - - 0.0000000000000000000000000000000000000000000000000000000000001665 219.0
SYD3_k127_3001195_14 FCD - - - 0.000000000000000000000000000000000000000000000000000000003239 207.0
SYD3_k127_3001195_15 ABC-type nitrate sulfonate bicarbonate transport - - - 0.00000000000000000000000000000000000006655 157.0
SYD3_k127_3001195_16 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000003674 69.0
SYD3_k127_3001195_2 Transketolase, pyrimidine binding domain K00162,K21417 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005849 523.0
SYD3_k127_3001195_3 Tripartite tricarboxylate transporter TctA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 484.0
SYD3_k127_3001195_4 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 449.0
SYD3_k127_3001195_5 alpha beta - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 436.0
SYD3_k127_3001195_6 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 409.0
SYD3_k127_3001195_7 e3 binding domain K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 366.0
SYD3_k127_3001195_8 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006497 370.0
SYD3_k127_3001195_9 PFAM dehydrogenase, E1 component K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004976 321.0
SYD3_k127_3016481_0 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 332.0
SYD3_k127_3016481_1 PFAM Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000003537 228.0
SYD3_k127_302406_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 6.286e-283 894.0
SYD3_k127_302406_1 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 387.0
SYD3_k127_302406_2 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007612 371.0
SYD3_k127_302406_3 Protein of unknown function, DUF599 - - - 0.000000000000000000000000000000000000000000000000001396 187.0
SYD3_k127_302406_4 endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000007498 184.0
SYD3_k127_302406_5 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 - 4.1.3.40 0.000000000000000000000000000000000000000000000005636 177.0
SYD3_k127_302406_6 TPR repeat - - - 0.000000000000000000000000000000000001878 141.0
SYD3_k127_3030953_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005478 514.0
SYD3_k127_3030953_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 338.0
SYD3_k127_3030953_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000006811 175.0
SYD3_k127_3030953_3 Two component transcriptional regulator, LuxR family - - - 0.00000000001409 65.0
SYD3_k127_3035884_0 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000604 552.0
SYD3_k127_3035884_1 VWA-like domain (DUF2201) - - - 0.0000000000000000000000000000000000000000000000000000000000001813 218.0
SYD3_k127_3035884_2 - - - - 0.0000000000000000003222 91.0
SYD3_k127_3038631_0 24 kD subunit K00122 - 1.17.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007221 464.0
SYD3_k127_3038631_1 TIGRFAM formate dehydrogenase, alpha subunit K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000004308 177.0
SYD3_k127_3051664_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 2.626e-234 734.0
SYD3_k127_3051664_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 1.258e-201 638.0
SYD3_k127_3051664_10 Protein of unknown function (DUF971) - - - 0.000000000000000000000000000000000000000000000000000000001732 203.0
SYD3_k127_3051664_11 import inner membrane translocase, subunit Tim44 - - - 0.00000000000000000000000000000000000000000000000000002118 199.0
SYD3_k127_3051664_12 membrane - - - 0.0000000000000000000000000000000000000000000006791 169.0
SYD3_k127_3051664_13 SCP-2 sterol transfer family K03690 - - 0.0000000000000000000000000000000000001737 147.0
SYD3_k127_3051664_2 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 360.0
SYD3_k127_3051664_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 355.0
SYD3_k127_3051664_4 single-stranded DNA 5'-3' exodeoxyribonuclease activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006859 343.0
SYD3_k127_3051664_5 Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4-linked N-acetylglucosamine oligosaccharide. This subunit is responsible for energy coupling to the transport system K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 333.0
SYD3_k127_3051664_6 mandelate racemase muconate lactonizing - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004134 264.0
SYD3_k127_3051664_7 Protein of unknown function (DUF2817) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006147 265.0
SYD3_k127_3051664_8 hydrolase of the alpha beta superfamily K07018 - - 0.000000000000000000000000000000000000000000000000000000000000000001436 233.0
SYD3_k127_3051664_9 VanZ like family - - - 0.0000000000000000000000000000000000000000000000000000000001104 218.0
SYD3_k127_3054916_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009588 553.0
SYD3_k127_3054916_1 Beta-eliminating lyase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007916 284.0
SYD3_k127_305668_0 Binding-protein-dependent transport system inner membrane component K02033,K15585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006761 414.0
SYD3_k127_305668_1 Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000003562 207.0
SYD3_k127_3061278_0 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 345.0
SYD3_k127_3061278_1 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000005922 242.0
SYD3_k127_3061278_2 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000002198 85.0
SYD3_k127_3063384_0 CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 486.0
SYD3_k127_3063384_1 PFAM Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 338.0
SYD3_k127_3064197_0 TonB dependent receptor K02014 - - 3.053e-218 697.0
SYD3_k127_3064197_1 AsmA family K07289 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 582.0
SYD3_k127_3064197_10 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 327.0
SYD3_k127_3064197_11 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000003984 255.0
SYD3_k127_3064197_12 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000000000000000000000000000000001212 246.0
SYD3_k127_3064197_13 transcription factor binding K07646,K21405 - 2.7.13.3 0.00000000000000000000000000000000000000000000001642 184.0
SYD3_k127_3064197_14 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000004592 155.0
SYD3_k127_3064197_15 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000002458 134.0
SYD3_k127_3064197_16 Protein of unknown function (DUF3618) - - - 0.0000000000000000000000000000001444 135.0
SYD3_k127_3064197_17 cheY-homologous receiver domain - - - 0.00000000000000000000002062 104.0
SYD3_k127_3064197_18 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0000000000000000000009083 101.0
SYD3_k127_3064197_19 Response regulator receiver - - - 0.00000000000000000002751 103.0
SYD3_k127_3064197_2 Pyridoxal-phosphate dependent enzyme K01738 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 542.0
SYD3_k127_3064197_20 2-Nitropropane dioxygenase - - - 0.0000000000000000002514 101.0
SYD3_k127_3064197_21 TIGRFAM thiamine biosynthesis protein ThiS K03154 - - 0.0000000000000000008274 89.0
SYD3_k127_3064197_22 - - - - 0.00000000000008561 79.0
SYD3_k127_3064197_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 508.0
SYD3_k127_3064197_4 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006274 452.0
SYD3_k127_3064197_5 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004907 425.0
SYD3_k127_3064197_6 endonuclease III K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052 394.0
SYD3_k127_3064197_7 Thioredoxin-like K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002991 367.0
SYD3_k127_3064197_8 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007323 353.0
SYD3_k127_3064197_9 Domain of unknown function (DUF1732) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005741 347.0
SYD3_k127_3073992_0 3-beta hydroxysteroid dehydrogenase/isomerase family K08678 - 4.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006711 417.0
SYD3_k127_3073992_1 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 299.0
SYD3_k127_3073992_2 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003578 266.0
SYD3_k127_30796_0 PFAM ABC transporter K06158 - - 2.827e-215 685.0
SYD3_k127_30796_1 Phospholipase D. Active site motifs. K06132 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 501.0
SYD3_k127_30796_2 Aldo/keto reductase family K00002 - 1.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 304.0
SYD3_k127_30796_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009412 264.0
SYD3_k127_30796_4 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007985 266.0
SYD3_k127_30796_5 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000001084 177.0
SYD3_k127_30796_6 Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria - - - 0.00000000000000000000000003488 112.0
SYD3_k127_30796_7 BON domain - - - 0.0000000000000000001232 93.0
SYD3_k127_30796_8 protein conserved in bacteria - - - 0.00000000000000009756 88.0
SYD3_k127_30796_9 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000005297 62.0
SYD3_k127_3095278_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0042802,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 1.109e-220 691.0
SYD3_k127_3095278_1 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000123 158.0
SYD3_k127_3105006_0 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 531.0
SYD3_k127_3105006_1 Orotidine 5'-phosphate decarboxylase / HUMPS family - - - 0.0000000000000000000000000000000000000000000000000000000009436 211.0
SYD3_k127_3105006_2 Lipopolysaccharide assembly protein A domain K08992 - - 0.00000000000000000000009304 100.0
SYD3_k127_3105006_3 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.0000000000004449 68.0
SYD3_k127_3108649_0 Belongs to the TPP enzyme family K01576 - 4.1.1.7 5.174e-227 716.0
SYD3_k127_3108649_1 Aconitase family (aconitate hydratase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006994 568.0
SYD3_k127_3108649_10 succinylglutamate desuccinylase K06987 - - 0.000000000001296 74.0
SYD3_k127_3108649_2 Acyl-CoA dehydrogenase, N-terminal domain K06446 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 426.0
SYD3_k127_3108649_3 Phosphoenolpyruvate phosphomutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006734 385.0
SYD3_k127_3108649_4 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006597 329.0
SYD3_k127_3108649_5 Enoyl-(Acyl carrier protein) reductase K00046 - 1.1.1.69 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002364 281.0
SYD3_k127_3108649_6 Belongs to the LeuD family K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000005171 209.0
SYD3_k127_3108649_7 CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000005323 145.0
SYD3_k127_3108649_8 - - - - 0.0000000000000000000000003598 110.0
SYD3_k127_3108649_9 Lysin motif - - - 0.00000000000000001013 87.0
SYD3_k127_3133611_0 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052 514.0
SYD3_k127_3133611_1 FAD dependent oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007156 499.0
SYD3_k127_3133611_2 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004481 379.0
SYD3_k127_3133611_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000001454 249.0
SYD3_k127_3133611_4 - - - - 0.000003874 53.0
SYD3_k127_313725_0 Radical SAM domain protein K15045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 531.0
SYD3_k127_313725_1 NADH dehydrogenase NAD(P)H nitroreductase K09019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 337.0
SYD3_k127_313725_2 FCD - - - 0.000000000000000000000000003891 115.0
SYD3_k127_3144123_0 PFAM GDSL-like Lipase Acylhydrolase - - - 0.00000000000000000000000000000000000000000000000000002214 199.0
SYD3_k127_3144123_1 Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0044464,GO:0055114 - 0.000000000000000000000007059 103.0
SYD3_k127_3157143_0 succinate dehydrogenase fumarate reductase, flavoprotein subunit K00394 - 1.8.99.2 1.009e-288 897.0
SYD3_k127_3157143_1 GMC oxidoreductase - - - 8.212e-233 734.0
SYD3_k127_3157143_10 heat shock protein binding - - - 0.0001746 44.0
SYD3_k127_3157143_2 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005112 470.0
SYD3_k127_3157143_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000184 231.0
SYD3_k127_3157143_4 reductase beta subunit K00395 - 1.8.99.2 0.00000000000000000000000000000000000000000000000000000000001216 209.0
SYD3_k127_3157143_5 Gluconate 2-dehydrogenase K06152 - 1.1.99.3 0.0000000000000000000000000000000000000000000000000000000004383 211.0
SYD3_k127_3157143_6 Transglycosylase associated protein - - - 0.0000000000000000000000083 110.0
SYD3_k127_3157143_7 Predicted membrane protein (DUF2061) - - - 0.00000000000000003765 85.0
SYD3_k127_3157143_9 Belongs to the UPF0255 family K11750 GO:0003674,GO:0003824,GO:0005575,GO:0006109,GO:0006629,GO:0008150,GO:0008152,GO:0009894,GO:0016020,GO:0016298,GO:0016787,GO:0016788,GO:0019222,GO:0043470,GO:0044238,GO:0050789,GO:0065007,GO:0071704,GO:0080090 - 0.0000004239 52.0
SYD3_k127_3166781_0 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005066 302.0
SYD3_k127_3166781_1 AhpC/TSA family - - - 0.0000000000000000000000000000000000000000000000000000000002135 214.0
SYD3_k127_3166781_2 Protein required for attachment to host cells - - - 0.000000000000000000000006821 107.0
SYD3_k127_3166781_3 Belongs to the skp family K06142 - - 0.0000000000000003079 86.0
SYD3_k127_3166781_4 Restriction endonuclease K07448 - - 0.0000000000000007964 85.0
SYD3_k127_3166781_5 - - - - 0.00000001266 61.0
SYD3_k127_3167005_0 acetyl-coa acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009788 571.0
SYD3_k127_3167005_1 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 0.000000000000000000000000000000000000271 143.0
SYD3_k127_3167005_2 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.000000000000000000000000000000000009102 139.0
SYD3_k127_3168964_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 422.0
SYD3_k127_3168964_1 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 354.0
SYD3_k127_3168964_2 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005566 281.0
SYD3_k127_3168964_3 Thermostable hemolysin - - - 0.0000000000000000000000000000000000002913 149.0
SYD3_k127_3168964_4 AMP-binding enzyme - - - 0.000000000000000000000006548 109.0
SYD3_k127_3171870_0 glutaminyl-tRNA synthetase K01886 - 6.1.1.18 0.000000000000000000000000000000000000001034 149.0
SYD3_k127_3171870_1 Bacterial protein of unknown function (DUF883) - - - 0.000000003675 61.0
SYD3_k127_3171870_2 Belongs to the UPF0337 (CsbD) family - - - 0.00001448 49.0
SYD3_k127_3173893_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 1.22e-218 698.0
SYD3_k127_3173893_1 Carbon-nitrogen hydrolase K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 569.0
SYD3_k127_3173893_2 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007036 493.0
SYD3_k127_3173893_3 TIGRFAM histidinol-phosphate phosphatase family protein K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000000653 224.0
SYD3_k127_3173893_4 Transporter associated domain K06189 - - 0.0000000000000000000000000000000000000000000000000000000001195 205.0
SYD3_k127_3192795_0 aconitate hydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 476.0
SYD3_k127_3192795_1 LysR substrate binding domain - - - 0.000000000000000004408 87.0
SYD3_k127_3218978_0 O-methyltransferase activity - - - 1.802e-231 734.0
SYD3_k127_3218978_1 Trypsin K04771,K04772 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 356.0
SYD3_k127_322007_0 AMP-binding enzyme C-terminal domain - - - 5.403e-241 769.0
SYD3_k127_322007_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002864 613.0
SYD3_k127_322007_2 Belongs to the enoyl-CoA hydratase isomerase family. MenB subfamily K01661,K07536 - 4.1.3.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 428.0
SYD3_k127_322007_3 Catalyzes the conversion of maleate to fumarate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004674 400.0
SYD3_k127_322007_4 Asp/Glu/Hydantoin racemase K01799 - 5.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000976 345.0
SYD3_k127_322007_5 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009222 342.0
SYD3_k127_322007_6 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 286.0
SYD3_k127_322271_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 1.661e-295 913.0
SYD3_k127_322271_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 5.262e-197 631.0
SYD3_k127_322271_2 Belongs to the KdsA family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 452.0
SYD3_k127_322271_3 HlyD membrane-fusion protein of T1SS K02022,K11003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006377 426.0
SYD3_k127_322271_4 (ABC) transporter K11004,K13409 - - 0.0000000000000000000000004199 105.0
SYD3_k127_3244953_0 Uncharacterized protein family UPF0004 K06168 - 2.8.4.3 3.124e-211 663.0
SYD3_k127_3244953_1 PFAM PhoH family protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004853 466.0
SYD3_k127_3244953_2 Transporter associated domain K06189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 289.0
SYD3_k127_3244953_3 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006659 250.0
SYD3_k127_3244953_4 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000000000000000000000000000008655 183.0
SYD3_k127_3246530_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 494.0
SYD3_k127_3246530_1 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000183 203.0
SYD3_k127_3267046_0 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003448 266.0
SYD3_k127_3267046_1 Bacterial extracellular solute-binding protein K22003 - 5.3.3.7 0.000000000000000000000000000000000000000000000000000005596 198.0
SYD3_k127_3267046_2 Asp Glu Hydantoin racemase family protein - - - 0.0000000000000000000000000000000000000000000002363 173.0
SYD3_k127_3267046_3 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000003293 120.0
SYD3_k127_3267046_4 AraC-like ligand binding domain - - - 0.00000000000000000000009453 109.0
SYD3_k127_3267046_5 SnoaL-like polyketide cyclase - - - 0.00000000000003408 76.0
SYD3_k127_3267046_6 AraC-like ligand binding domain - - - 0.00001384 56.0
SYD3_k127_3296066_0 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 484.0
SYD3_k127_3296066_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 403.0
SYD3_k127_3296066_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000005132 142.0
SYD3_k127_3296066_3 diguanylate cyclase - - - 0.0000000002477 63.0
SYD3_k127_3315415_0 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.000000000000000000000000000000000162 137.0
SYD3_k127_3315415_1 NAD(P)H quinone oxidoreductase, PIG3 family K00344 - 1.6.5.5 0.00000000000000000000000278 108.0
SYD3_k127_3315415_2 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000006886 101.0
SYD3_k127_3316613_0 Transposase mutator type - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003182 537.0
SYD3_k127_3334062_0 Nitrate reductase beta subunit K00371,K17051 - 1.7.5.1 6.09e-290 897.0
SYD3_k127_3334062_1 PFAM LysR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 410.0
SYD3_k127_3334062_2 Nitrate reductase gamma subunit K00374 - 1.7.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 311.0
SYD3_k127_3334062_3 Respiratory nitrate reductase alpha N-terminal K00370 - 1.7.5.1 0.0000000000000000000000000000000000000000000000000000000000000000551 223.0
SYD3_k127_3334062_4 PFAM sigma-70 region 2 domain protein K03088 - - 0.00000000000000000000000000000000000000000000000000000000002163 211.0
SYD3_k127_3334062_5 Nitrate reductase delta subunit - - - 0.00000000000000000000000000000000000000000000000000000000008953 211.0
SYD3_k127_3334062_6 - - - - 0.00000000000000000000000000000000000000000000000000000007048 202.0
SYD3_k127_3334062_7 - - - - 0.0000000000000000000000000000000000000000000000000006571 188.0
SYD3_k127_3334062_8 Heavy-metal resistance - - - 0.00000000000000000000000000000000007712 143.0
SYD3_k127_3334062_9 Putative zinc-finger - - - 0.000000000000000001085 91.0
SYD3_k127_333774_0 Nudix N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002948 276.0
SYD3_k127_333774_1 depolymerase - - - 0.0000000000000000000000000000000000000000000000000000000000000423 232.0
SYD3_k127_333774_2 PFAM Integral membrane protein TerC - - - 0.000000000000000000008557 92.0
SYD3_k127_3351401_0 Molybdopterin oxidoreductase Fe4S4 domain K00336 - 1.6.5.3 0.0 1024.0
SYD3_k127_3351401_1 chain 5 L K00341 - 1.6.5.3 3.103e-303 941.0
SYD3_k127_3351401_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000000000000000001252 164.0
SYD3_k127_3351401_11 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 0.0000000000000000000000000000008538 130.0
SYD3_k127_3351401_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.0000000000000000000003646 95.0
SYD3_k127_3351401_2 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 2.732e-240 750.0
SYD3_k127_3351401_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 1.328e-194 638.0
SYD3_k127_3351401_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006172 542.0
SYD3_k127_3351401_5 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 359.0
SYD3_k127_3351401_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004431 297.0
SYD3_k127_3351401_7 Belongs to the enoyl-CoA hydratase isomerase family K13816 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001431 273.0
SYD3_k127_3351401_8 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000007254 274.0
SYD3_k127_3351401_9 NUDIX domain K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000000000000000000003447 222.0
SYD3_k127_3352843_0 Electron transfer flavoprotein K03522 - - 0.000000000000000000000000000000005036 140.0
SYD3_k127_3352843_1 Electron transfer flavoprotein K03521 - - 0.0000000325 59.0
SYD3_k127_3355990_0 Short chain dehydrogenase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 376.0
SYD3_k127_3355990_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001944 261.0
SYD3_k127_3355990_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000104 162.0
SYD3_k127_3355990_3 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000009552 156.0
SYD3_k127_3355990_4 Domain of unknown function (DUF305) - - - 0.0000000000000000000000000000000000000008935 154.0
SYD3_k127_3355990_5 carboxymuconolactone decarboxylase - - - 0.0000000000000000000000001271 120.0
SYD3_k127_3357115_0 Psort location CytoplasmicMembrane, score 10.00 K03458 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008239 426.0
SYD3_k127_3357115_1 alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008432 341.0
SYD3_k127_3357115_2 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000000000000000000000000000000000000000000000134 238.0
SYD3_k127_3357115_3 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000001504 149.0
SYD3_k127_3357115_4 Histidine kinase-like ATPase domain - - - 0.00000000000000000000000000004592 123.0
SYD3_k127_3357115_5 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000000000000767 101.0
SYD3_k127_3357115_6 Protein of unknown function (DUF1328) - - - 0.0000000004657 60.0
SYD3_k127_3392356_0 Type I restriction enzyme R protein N terminus (HSDR_N) K01153 - 3.1.21.3 0.0 1452.0
SYD3_k127_3392356_1 PLD-like domain - - - 0.0 1211.0
SYD3_k127_3392356_10 intramolecular transferase activity, transferring amino groups K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 530.0
SYD3_k127_3392356_11 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 520.0
SYD3_k127_3392356_12 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 483.0
SYD3_k127_3392356_13 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004748 472.0
SYD3_k127_3392356_14 amino acid ABC transporter K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 472.0
SYD3_k127_3392356_15 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008346 426.0
SYD3_k127_3392356_16 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006078 422.0
SYD3_k127_3392356_17 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 413.0
SYD3_k127_3392356_18 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 396.0
SYD3_k127_3392356_19 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004508 384.0
SYD3_k127_3392356_2 Belongs to the IlvD Edd family K01687 - 4.2.1.9 9.829e-282 878.0
SYD3_k127_3392356_20 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 394.0
SYD3_k127_3392356_21 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 358.0
SYD3_k127_3392356_22 Peptidase_C39 like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006206 335.0
SYD3_k127_3392356_23 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006094 339.0
SYD3_k127_3392356_24 FAD binding domain K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006559 332.0
SYD3_k127_3392356_25 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000392 315.0
SYD3_k127_3392356_26 PFAM Ion transport K08714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 315.0
SYD3_k127_3392356_27 Protein of unknown function DUF45 K07043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 306.0
SYD3_k127_3392356_28 PFAM ABC transporter related K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 291.0
SYD3_k127_3392356_29 Phage plasmid primase, P4 family domain protein K06919 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001681 298.0
SYD3_k127_3392356_3 Protein of unknown function, DUF255 K06888 - - 6.585e-271 852.0
SYD3_k127_3392356_30 Nucleotidyl transferase K00992 - 2.7.7.99 0.000000000000000000000000000000000000000000000000000000000000000000000000001346 259.0
SYD3_k127_3392356_31 Lactoylglutathione lyase K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000002578 224.0
SYD3_k127_3392356_32 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000004191 228.0
SYD3_k127_3392356_33 Thiamine monophosphate synthase K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000000002048 210.0
SYD3_k127_3392356_34 PFAM cytochrome c, class I K08738 - - 0.000000000000000000000000000000000008748 139.0
SYD3_k127_3392356_35 - - - - 0.0000000000000000000000000000004374 129.0
SYD3_k127_3392356_36 Rubredoxin - - - 0.000000000000000000000000000004125 120.0
SYD3_k127_3392356_37 Belongs to the transcriptional regulatory Fis family K03557 - - 0.0000000000000000000000000009157 118.0
SYD3_k127_3392356_38 Phage plasmid primase P4 family K06919 - - 0.000000000001615 81.0
SYD3_k127_3392356_39 - - - - 0.000000000001644 73.0
SYD3_k127_3392356_4 - - - - 1.402e-255 796.0
SYD3_k127_3392356_40 - - - - 0.0003865 49.0
SYD3_k127_3392356_41 - - - - 0.0006972 44.0
SYD3_k127_3392356_5 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 5.353e-237 742.0
SYD3_k127_3392356_6 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 1.314e-208 673.0
SYD3_k127_3392356_7 Belongs to the GARS family K01945 - 6.3.4.13 7.122e-194 612.0
SYD3_k127_3392356_8 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006879 611.0
SYD3_k127_3392356_9 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 546.0
SYD3_k127_3408476_0 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004916 371.0
SYD3_k127_3408476_1 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000008951 199.0
SYD3_k127_340971_0 - - - - 0.000000000000000000000000000000000001962 141.0
SYD3_k127_340971_1 Protein of unknown function (DUF3024) - - - 0.0000000000000000000003987 100.0
SYD3_k127_3416767_0 oxidoreductase activity K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 578.0
SYD3_k127_3416767_1 ATPase associated with various cellular activities, AAA_3 K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000666 506.0
SYD3_k127_3416767_10 Aerotolerance regulator N-terminal - - - 0.00000000000001231 82.0
SYD3_k127_3416767_2 Belongs to the ABC transporter superfamily K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 379.0
SYD3_k127_3416767_3 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 359.0
SYD3_k127_3416767_4 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 348.0
SYD3_k127_3416767_5 transport systems K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 342.0
SYD3_k127_3416767_6 Von Willebrand factor type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 328.0
SYD3_k127_3416767_7 Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 295.0
SYD3_k127_3416767_8 dipeptide transport K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001393 272.0
SYD3_k127_3416767_9 Trypsin-like peptidase domain - - - 0.0000000000000003992 79.0
SYD3_k127_3509417_0 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005071 273.0
SYD3_k127_3509417_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000002465 126.0
SYD3_k127_3509417_2 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000005336 109.0
SYD3_k127_3511445_0 ABC transporter transmembrane region K06147 - - 7.81e-244 766.0
SYD3_k127_3511445_1 Methyltransferase K18911 - 2.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 373.0
SYD3_k127_3511445_2 Histidine kinase K07649 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005561 366.0
SYD3_k127_3511445_3 Beta-lactamase enzyme family K07262 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 301.0
SYD3_k127_3511445_4 response regulator K02483,K07666,K07774 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 295.0
SYD3_k127_3511445_5 PFAM alpha beta hydrolase fold - - - 0.00000002983 58.0
SYD3_k127_352624_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.033e-271 840.0
SYD3_k127_352624_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004976 522.0
SYD3_k127_352624_2 membrane - - - 0.000000000000000000000000004047 117.0
SYD3_k127_3529451_0 FCD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002125 274.0
SYD3_k127_3529451_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002737 252.0
SYD3_k127_3529451_2 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000004512 98.0
SYD3_k127_3571101_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1405.0
SYD3_k127_3571101_1 Ribonuclease E/G family K08301 - - 2.169e-231 727.0
SYD3_k127_3571101_10 Domain of unknown function (DUF2437) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009403 293.0
SYD3_k127_3571101_11 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000001759 262.0
SYD3_k127_3571101_12 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000000005914 237.0
SYD3_k127_3571101_13 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000001931 214.0
SYD3_k127_3571101_14 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000532 211.0
SYD3_k127_3571101_15 integral membrane protein K02221 - - 0.00000000000000000000000000000000000000000000000000008682 192.0
SYD3_k127_3571101_16 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000622 186.0
SYD3_k127_3571101_17 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000000221 175.0
SYD3_k127_3571101_18 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000001464 143.0
SYD3_k127_3571101_19 membrane transporter protein K07090 - - 0.00000000000000000000000000000000264 139.0
SYD3_k127_3571101_2 twitching motility protein K02670 - - 1.205e-200 629.0
SYD3_k127_3571101_20 HIRAN domain - - - 0.00000000000000000000000000000003021 130.0
SYD3_k127_3571101_21 - - - - 0.00000000000000001821 89.0
SYD3_k127_3571101_22 DUF167 K09131 - - 0.0000004097 61.0
SYD3_k127_3571101_3 twitching motility protein K02669 - - 2.147e-200 628.0
SYD3_k127_3571101_4 Phospholipase D. Active site motifs. K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000606 535.0
SYD3_k127_3571101_5 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00382,K00627 - 1.8.1.4,2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005196 508.0
SYD3_k127_3571101_6 THUMP K07444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 455.0
SYD3_k127_3571101_7 Transport permease protein K09694 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000496 349.0
SYD3_k127_3571101_8 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 338.0
SYD3_k127_3571101_9 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007542 302.0
SYD3_k127_3588896_0 poly(R)-hydroxyalkanoic acid synthase K03821 - - 3.096e-256 802.0
SYD3_k127_3588896_1 Acyl-CoA dehydrogenase, C-terminal domain K00253 - 1.3.8.4 0.0000000000000000000000000000000000000000000000002656 179.0
SYD3_k127_3588896_2 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000756 173.0
SYD3_k127_3588896_3 transcriptional - - - 0.0000000000000000000000000000000001125 137.0
SYD3_k127_366884_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 3.571e-236 734.0
SYD3_k127_366884_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 317.0
SYD3_k127_366884_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006212 270.0
SYD3_k127_366884_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000004113 252.0
SYD3_k127_366884_4 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000009318 258.0
SYD3_k127_366884_5 COG1905 NADH ubiquinone oxidoreductase 24 kD subunit K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000001019 233.0
SYD3_k127_366884_6 Fumarate reductase subunit C - - - 0.0000000000000000000000000008333 119.0
SYD3_k127_366884_7 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000005853 78.0
SYD3_k127_366884_8 Fumarate reductase subunit D - - - 0.00000000000002529 82.0
SYD3_k127_3673581_0 ABC transporter transmembrane region K06147 - - 5.526e-286 904.0
SYD3_k127_3673581_1 nodulation K00612 - - 5.701e-259 810.0
SYD3_k127_3673581_10 D,D-heptose 1,7-bisphosphate phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000002 229.0
SYD3_k127_3673581_11 PFAM LmbE family protein - - - 0.000000000000000000000000000000000000000000001831 179.0
SYD3_k127_3673581_12 - - - - 0.000000000000000000000000000002159 126.0
SYD3_k127_3673581_13 Short-chain dehydrogenase reductase sdr - - - 0.0000000007293 61.0
SYD3_k127_3673581_2 SIS domain K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 497.0
SYD3_k127_3673581_3 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008998 462.0
SYD3_k127_3673581_4 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 430.0
SYD3_k127_3673581_5 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004807 387.0
SYD3_k127_3673581_6 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 385.0
SYD3_k127_3673581_7 Glycosyl transferase family group 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003674 353.0
SYD3_k127_3673581_8 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 313.0
SYD3_k127_3673581_9 glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001841 287.0
SYD3_k127_369329_0 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 387.0
SYD3_k127_369329_1 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008492 307.0
SYD3_k127_369329_2 TIGRFAM DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007211 295.0
SYD3_k127_369329_3 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000001115 248.0
SYD3_k127_369329_4 4-amino-4-deoxychorismate lyase K02619 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008696,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0019842,GO:0030170,GO:0034641,GO:0036094,GO:0042558,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0070279,GO:0071704,GO:0097159,GO:1901360,GO:1901363,GO:1901564 4.1.3.38 0.000000000000000000000000000000000000000000008111 166.0
SYD3_k127_3717627_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000001675 177.0
SYD3_k127_3717627_1 Transglycosylase SLT domain - - - 0.0000000000000000000000000000002491 131.0
SYD3_k127_3728322_0 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008108 408.0
SYD3_k127_3728322_1 VWA-like domain (DUF2201) - - - 0.00000000000000000000000000000000000000000000000004665 180.0
SYD3_k127_373899_0 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005362 539.0
SYD3_k127_373899_1 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005919 280.0
SYD3_k127_373899_2 Tripartite tricarboxylate transporter family receptor K07795 - - 0.000000000000000000000000000000000000000000000000000000000000000000001987 248.0
SYD3_k127_373899_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000003908 217.0
SYD3_k127_373899_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000001043 72.0
SYD3_k127_3741270_0 MASE1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004368 258.0
SYD3_k127_3741270_1 Two component transcriptional regulator, LuxR family K13041 - - 0.000000000000000000000000000002501 124.0
SYD3_k127_383610_0 modulator of DNA gyrase K03592 - - 7.065e-200 631.0
SYD3_k127_383610_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.091e-199 629.0
SYD3_k127_383610_2 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000593 591.0
SYD3_k127_383610_3 Probable molybdopterin binding domain K03831 - 2.7.7.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 307.0
SYD3_k127_383610_4 Serine hydrolase (FSH1) K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007453 299.0
SYD3_k127_383610_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004537 256.0
SYD3_k127_383610_6 Belongs to the UPF0307 family K09889 - - 0.00000000000000000000000000000000000000000427 160.0
SYD3_k127_38378_0 MMPL family - - - 0.0 1354.0
SYD3_k127_38378_1 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 GO:0000287,GO:0003674,GO:0003824,GO:0004738,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0019842,GO:0030976,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0055114,GO:0097159,GO:1901363,GO:1901681 1.2.4.1 0.0 1107.0
SYD3_k127_38378_10 Bacterial regulatory helix-turn-helix protein, lysR family K04761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008911 305.0
SYD3_k127_38378_11 Biotin-lipoyl like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 306.0
SYD3_k127_38378_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 297.0
SYD3_k127_38378_13 AhpC/TSA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 294.0
SYD3_k127_38378_14 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 290.0
SYD3_k127_38378_15 Pfam Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006653 263.0
SYD3_k127_38378_16 response to abiotic stimulus K06867 GO:0008150,GO:0009314,GO:0009628,GO:0050896 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001012 260.0
SYD3_k127_38378_17 protein deglycase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009878 250.0
SYD3_k127_38378_18 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002296 237.0
SYD3_k127_38378_19 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K04756 - - 0.00000000000000000000000000000000000000000000000000000000000000005655 229.0
SYD3_k127_38378_2 Phospholipase D Active site motif K01115 - 3.1.4.4 2.051e-263 831.0
SYD3_k127_38378_20 PFAM regulatory protein AsnC Lrp family K03719 GO:0001101,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042221,GO:0043200,GO:0043565,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1901698,GO:1901700,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000009803 214.0
SYD3_k127_38378_21 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000000002431 190.0
SYD3_k127_38378_22 Cupin domain - - - 0.000000000000000000000000000000000000000000002366 170.0
SYD3_k127_38378_23 Putative cyclase - - - 0.00000000000000000000000000000000000000000001063 165.0
SYD3_k127_38378_24 cheY-homologous receiver domain - - - 0.00000000000000000000000008827 111.0
SYD3_k127_38378_25 SUF system FeS assembly protein, NifU family K04488 - - 0.000000000000000000000001017 115.0
SYD3_k127_38378_26 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 0.000000000000000000000006837 108.0
SYD3_k127_38378_27 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000007134 99.0
SYD3_k127_38378_28 Sulfopyruvate decarboxylase, beta subunit K13039 - 4.1.1.79 0.0000000000000003079 86.0
SYD3_k127_38378_29 - - - - 0.000000000000001567 79.0
SYD3_k127_38378_3 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008768 610.0
SYD3_k127_38378_30 membrane transporter protein K07090 - - 0.000008596 49.0
SYD3_k127_38378_31 redox protein regulator of disulfide bond formation - - - 0.0003264 50.0
SYD3_k127_38378_4 synthase component I K01665 - 2.6.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 556.0
SYD3_k127_38378_5 PFAM aminotransferase, class I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008305 506.0
SYD3_k127_38378_6 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004769 451.0
SYD3_k127_38378_7 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004759 376.0
SYD3_k127_38378_8 TRAP transporter solute receptor TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006988 372.0
SYD3_k127_38378_9 Protein of unknown function (DUF1847) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 340.0
SYD3_k127_384153_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1030.0
SYD3_k127_384153_1 Histidine kinase-like ATPase domain - - - 1.087e-195 640.0
SYD3_k127_384153_10 PFAM Sulfate transporter antisigma-factor antagonist STAS K17762 - - 0.0000000000000000000000000000000000000000000000007048 177.0
SYD3_k127_384153_11 toluene tolerance family protein K07323 - - 0.00000000000000000000000000000000000000000000000242 181.0
SYD3_k127_384153_12 Histidine kinase-like ATPases K17752 - 2.7.11.1 0.0000000000000000000000000000000000000000000001876 173.0
SYD3_k127_384153_13 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000000008603 107.0
SYD3_k127_384153_14 - - - - 0.000000000549 65.0
SYD3_k127_384153_15 - - - - 0.00000003706 65.0
SYD3_k127_384153_2 Sigma-54 interaction domain K07715 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 619.0
SYD3_k127_384153_3 Malate/L-lactate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 473.0
SYD3_k127_384153_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006412 428.0
SYD3_k127_384153_5 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 404.0
SYD3_k127_384153_6 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K17763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006996 330.0
SYD3_k127_384153_7 Histidine kinase-like ATPase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 312.0
SYD3_k127_384153_8 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000003088 235.0
SYD3_k127_384153_9 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000001184 183.0
SYD3_k127_3852068_0 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031,K02032,K13892 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 409.0
SYD3_k127_3852068_1 FAD linked oxidases, C-terminal domain K18930 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004829 387.0
SYD3_k127_385698_0 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005846 311.0
SYD3_k127_385698_1 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006047 312.0
SYD3_k127_385698_2 SMART Rhodanese domain protein - - - 0.00001569 47.0
SYD3_k127_385698_3 MlaD protein K02067 - - 0.0001569 48.0
SYD3_k127_386912_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000003162 225.0
SYD3_k127_386912_1 Serine hydrolase K07002 - - 0.00000000000000000000000000000000000000000003916 168.0
SYD3_k127_386912_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000001288 54.0
SYD3_k127_387034_0 TRCF K03723 - - 0.0 1474.0
SYD3_k127_387034_1 Radical SAM superfamily K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 485.0
SYD3_k127_387034_2 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 348.0
SYD3_k127_387034_3 D-isomer specific 2-hydroxyacid dehydrogenase - - - 0.00001681 48.0
SYD3_k127_396337_0 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051,K15576 - - 1.718e-238 743.0
SYD3_k127_396337_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005012 380.0
SYD3_k127_396337_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002793 264.0
SYD3_k127_396337_3 Membrane - GO:0000003,GO:0000910,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0019954,GO:0022402,GO:0022414,GO:0032505,GO:0043093,GO:0044464,GO:0051301,GO:0071944 - 0.0000000000000000000000000000000000000000000005587 171.0
SYD3_k127_3994553_0 aerobic-type carbon monoxide dehydrogenase, large subunit CoxL - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 470.0
SYD3_k127_3994553_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006322 458.0
SYD3_k127_3994553_2 aerobic-type carbon monoxide dehydrogenase, large subunit CoxL - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004665 318.0
SYD3_k127_3994553_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005768 291.0
SYD3_k127_3994553_4 PFAM thioesterase superfamily protein K07107 - - 0.000000000000000000000000000000000000000000000000000001198 196.0
SYD3_k127_405057_0 Respiratory nitrate reductase alpha N-terminal K00370 - 1.7.5.1 0.0 1313.0
SYD3_k127_4088983_0 Belongs to the amidase family K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003679 556.0
SYD3_k127_4088983_1 Tripartite tricarboxylate transporter family receptor K07795 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001389 280.0
SYD3_k127_4088983_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003884 263.0
SYD3_k127_4088983_3 Cupin 2, conserved barrel domain protein K11312 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003827 252.0
SYD3_k127_4088983_4 Haem-degrading - - - 0.0000000000000000000000000000000000000000000000000000417 192.0
SYD3_k127_4088983_5 Putative serine dehydratase domain - - - 0.00000000000000000000000003384 111.0
SYD3_k127_4088983_6 Succinylglutamate desuccinylase K06987 - - 0.000000000000000006344 94.0
SYD3_k127_4093825_0 Uncharacterized ACR, YdiU/UPF0061 family - - - 3.958e-208 655.0
SYD3_k127_4093825_1 FMN-dependent dehydrogenase K00101 - 1.1.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003808 315.0
SYD3_k127_4093825_2 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) K02351 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007738 309.0
SYD3_k127_409533_0 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002888 408.0
SYD3_k127_409533_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005527 376.0
SYD3_k127_409533_2 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 365.0
SYD3_k127_409533_3 ATP ADP translocase K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007849 268.0
SYD3_k127_409533_4 Tripartite tricarboxylate transporter TctA family K07793 - - 0.0000000000000000000000000000000000003884 143.0
SYD3_k127_409533_5 Tripartite tricarboxylate transporter TctB family - - - 0.0005335 50.0
SYD3_k127_4107634_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 1.771e-246 768.0
SYD3_k127_4107634_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 319.0
SYD3_k127_4107634_2 Protein of unknown function, DUF480 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005922 272.0
SYD3_k127_4120717_0 copper-resistance protein, CopA family - - - 0.000000000000000000000000000000000000000000000000000000000001482 217.0
SYD3_k127_4120717_1 phosphohistidine phosphatase, SixA - - - 0.0000000000000000000000000004097 128.0
SYD3_k127_4120717_2 protein conserved in bacteria - - - 0.00000000000000000000000002374 114.0
SYD3_k127_4120717_3 Histidine phosphatase superfamily (branch 1) - - - 0.00004552 50.0
SYD3_k127_4125369_0 Psort location CytoplasmicMembrane, score 10.00 K07793 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 493.0
SYD3_k127_4125369_1 CoA-transferase family III K07749 GO:0003674,GO:0003824,GO:0008410,GO:0016740,GO:0016782,GO:0047369 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 361.0
SYD3_k127_4125369_2 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004397 336.0
SYD3_k127_4125369_3 Tripartite tricarboxylate transporter family receptor K07795 - - 0.0000000000000000000000000000000000000000000003893 178.0
SYD3_k127_4125369_4 N-terminal half of MaoC dehydratase - - - 0.000000000000000000000000000000000000000000004717 171.0
SYD3_k127_4125369_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000001259 163.0
SYD3_k127_4125369_6 Tripartite tricarboxylate transporter TctB family - - - 0.000000000004327 76.0
SYD3_k127_4125369_7 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.00000000006405 64.0
SYD3_k127_4126380_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 1.693e-222 711.0
SYD3_k127_4126380_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 4.12e-210 666.0
SYD3_k127_4126380_10 - - - - 0.00000000000000000000000000000000000001442 147.0
SYD3_k127_4126380_11 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 - 3.1.4.53 0.0000000000000000000000009006 112.0
SYD3_k127_4126380_12 Protein of unknown function (DUF465) - - - 0.0000000000001043 74.0
SYD3_k127_4126380_13 Cytochrome C' - - - 0.0000000005092 67.0
SYD3_k127_4126380_2 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00666 - - 2.824e-197 623.0
SYD3_k127_4126380_3 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000323 565.0
SYD3_k127_4126380_4 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001964 284.0
SYD3_k127_4126380_5 DNA repair - GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0032259,GO:0034641,GO:0036260,GO:0036261,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071164,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000209 218.0
SYD3_k127_4126380_6 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000001059 194.0
SYD3_k127_4126380_7 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.00000000000000000000000000000000000000000000000006085 185.0
SYD3_k127_4126380_8 - - - - 0.000000000000000000000000000000000000000000000001643 181.0
SYD3_k127_4126380_9 chain release factor K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - 0.0000000000000000000000000000000000000000000002095 171.0
SYD3_k127_4132229_0 Major facilitator Superfamily K08218 - - 1.002e-238 748.0
SYD3_k127_4132229_1 Hydrolase CocE NonD family K06978 - - 3.131e-238 751.0
SYD3_k127_4132229_10 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009735 265.0
SYD3_k127_4132229_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000004689 241.0
SYD3_k127_4132229_12 oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000489 226.0
SYD3_k127_4132229_13 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000003624 176.0
SYD3_k127_4132229_14 Serine hydrolase (FSH1) K06889 - - 0.000000000000000000000000003845 112.0
SYD3_k127_4132229_15 membrane transporter protein K07090 - - 0.00000000000000000003194 100.0
SYD3_k127_4132229_2 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 2.662e-228 711.0
SYD3_k127_4132229_3 PFAM Rhodanese domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005296 592.0
SYD3_k127_4132229_4 Belongs to the DEAD box helicase family K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 515.0
SYD3_k127_4132229_5 SMART phosphoesterase PHP domain protein K07053 GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0097657 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 339.0
SYD3_k127_4132229_6 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 336.0
SYD3_k127_4132229_7 Peptidase M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 315.0
SYD3_k127_4132229_8 Belongs to the SUA5 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005768 291.0
SYD3_k127_4132229_9 HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001259 279.0
SYD3_k127_4141695_0 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004866 517.0
SYD3_k127_4141695_1 AsmA family K07289,K07290 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003571 390.0
SYD3_k127_4141695_2 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002531 264.0
SYD3_k127_4141695_3 Carboxymuconolactone decarboxylase family - - - 0.000000000000000000000000000000000000000000000000000009077 193.0
SYD3_k127_4141695_4 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000004203 183.0
SYD3_k127_4141695_5 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.00007671 46.0
SYD3_k127_4147949_0 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.000000000000000000000000000000000000000000000000000000000000000001368 232.0
SYD3_k127_4147949_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.00000000000000000000000000000000000000000000000000000000000000003473 225.0
SYD3_k127_4147949_2 - - - - 0.0002294 44.0
SYD3_k127_4149906_0 PFAM MoeA domain protein domain I and II K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 501.0
SYD3_k127_4149906_1 Bacterial extracellular solute-binding protein K05772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 415.0
SYD3_k127_4149906_2 PFAM binding-protein-dependent transport systems inner membrane component K05773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008346 308.0
SYD3_k127_4149906_3 ATPases associated with a variety of cellular activities K06857 - 3.6.3.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001997 281.0
SYD3_k127_4149906_4 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.0000000000000000000000000000000000000000000000000000000000002316 219.0
SYD3_k127_4149906_5 PBP superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000001032 222.0
SYD3_k127_4151223_0 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 372.0
SYD3_k127_4151223_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 351.0
SYD3_k127_4151223_2 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000001566 169.0
SYD3_k127_4151223_3 dioxygenase of extradiol dioxygenase family K06991 - - 0.0000000000000000000000000000000001913 137.0
SYD3_k127_4151223_4 NMT1/THI5 like K02051 - - 0.00000000000000000000000000003538 121.0
SYD3_k127_4151223_5 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000001472 121.0
SYD3_k127_4155012_0 COG0841 Cation multidrug efflux pump K03296,K18138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008684 590.0
SYD3_k127_4157376_0 Putative diguanylate phosphodiesterase - - - 6.704e-293 930.0
SYD3_k127_4157376_1 PFAM TrkA-N domain protein K03499 - - 2.181e-206 653.0
SYD3_k127_4157376_2 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006772 554.0
SYD3_k127_4157376_3 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005184 543.0
SYD3_k127_4157376_4 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 313.0
SYD3_k127_4157376_5 Belongs to the UPF0301 (AlgH) family K07735 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008398 278.0
SYD3_k127_4157376_6 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000000004348 257.0
SYD3_k127_4157376_7 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000000000000000000002275 156.0
SYD3_k127_4157376_8 Phosphoglycerate mutase family K08296 - - 0.00000000000000000000000000000000000000003757 158.0
SYD3_k127_4157376_9 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 0.000000000000000000000000004188 111.0
SYD3_k127_4157526_0 Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 494.0
SYD3_k127_4157526_1 PFAM Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 362.0
SYD3_k127_4157526_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002366 288.0
SYD3_k127_4157526_3 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000874 273.0
SYD3_k127_4157526_4 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009041 263.0
SYD3_k127_4157526_5 Tripartite tricarboxylate transporter family receptor K07795 - - 0.000000000000000000000000000000000000000000000000000000000000000000001811 247.0
SYD3_k127_4157526_6 PFAM Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000125 144.0
SYD3_k127_4157526_7 Cupin domain - - - 0.00000000000000008213 93.0
SYD3_k127_4157579_0 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007978 306.0
SYD3_k127_4157579_1 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000001223 234.0
SYD3_k127_4158432_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0000226,GO:0001817,GO:0001819,GO:0001906,GO:0001907,GO:0002376,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0004365,GO:0004857,GO:0004866,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005811,GO:0005829,GO:0005856,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006417,GO:0006464,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007010,GO:0007017,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009435,GO:0009605,GO:0009607,GO:0009620,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009987,GO:0010033,GO:0010466,GO:0010468,GO:0010506,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010941,GO:0010942,GO:0010951,GO:0012501,GO:0012505,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016241,GO:0016310,GO:0016491,GO:0016620,GO:0016740,GO:0016769,GO:0016903,GO:0017014,GO:0017144,GO:0017148,GO:0018119,GO:0018130,GO:0018193,GO:0018198,GO:0019222,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019730,GO:0019752,GO:0019828,GO:0019904,GO:0030162,GO:0030234,GO:0030414,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031341,GO:0031343,GO:0031640,GO:0031647,GO:0031965,GO:0031967,GO:0031975,GO:0032268,GO:0032269,GO:0032787,GO:0032879,GO:0032880,GO:0032991,GO:0034097,GO:0034248,GO:0034249,GO:0034341,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035605,GO:0035606,GO:0035821,GO:0036094,GO:0036211,GO:0042221,GO:0042802,GO:0042866,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043436,GO:0043891,GO:0043900,GO:0043902,GO:0043903,GO:0044003,GO:0044004,GO:0044068,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044364,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044531,GO:0044532,GO:0044533,GO:0045087,GO:0045861,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050662,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050832,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051287,GO:0051336,GO:0051346,GO:0051402,GO:0051701,GO:0051702,GO:0051704,GO:0051707,GO:0051709,GO:0051712,GO:0051716,GO:0051817,GO:0051818,GO:0051851,GO:0051852,GO:0051873,GO:0051883,GO:0052040,GO:0052042,GO:0052248,GO:0052330,GO:0052433,GO:0052501,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060255,GO:0061134,GO:0061135,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0061844,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070887,GO:0070997,GO:0071310,GO:0071345,GO:0071346,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090087,GO:0090407,GO:0097159,GO:0097452,GO:0097718,GO:0098542,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903530,GO:1903532,GO:1904951,GO:1990904,GO:2000112,GO:2000113 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 561.0
SYD3_k127_4158432_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 540.0
SYD3_k127_4158432_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004352 493.0
SYD3_k127_4181314_0 Tripartite tricarboxylate transporter TctA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 594.0
SYD3_k127_4185209_0 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005356 274.0
SYD3_k127_4185209_1 Belongs to the DapA family K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000006448 200.0
SYD3_k127_4185209_2 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000002182 105.0
SYD3_k127_4189293_0 Aldehyde oxidase and xanthine dehydrogenase a b hammerhead K03520,K11177 - 1.17.1.4,1.2.5.3 2.07e-210 667.0
SYD3_k127_4189293_1 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000004232 252.0
SYD3_k127_4189293_2 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000001053 235.0
SYD3_k127_4193864_0 Oxidoreductase molybdopterin binding domain K07147 - - 0.000000000000000000000000000000000000000000000000000004929 205.0
SYD3_k127_4193864_1 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 0.0000000000000000000000000000000000000001704 152.0
SYD3_k127_4193864_2 Electron transfer flavoprotein domain K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114 - 0.0000009381 53.0
SYD3_k127_4196649_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 2.589e-239 752.0
SYD3_k127_4199236_0 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001167 250.0
SYD3_k127_4199236_1 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000001084 211.0
SYD3_k127_4199236_2 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000004587 201.0
SYD3_k127_4199236_3 decarboxylase K01607 - 4.1.1.44 0.0000000000000000000000000000000000000000000000000005292 192.0
SYD3_k127_4205308_0 COG2801 Transposase and inactivated derivatives K07497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008493 338.0
SYD3_k127_4206837_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004819 270.0
SYD3_k127_4206837_1 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000000006971 241.0
SYD3_k127_4206837_2 TRAP transporter, 4TM 12TM fusion protein - - - 0.000000000007884 68.0
SYD3_k127_4207903_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 8.472e-235 738.0
SYD3_k127_4207903_1 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000004743 189.0
SYD3_k127_4207903_2 COG1034 NADH dehydrogenase NADH ubiquinone oxidoreductase 75 kD subunit (chain G) K00336 - 1.6.5.3 0.0000000000000000005712 86.0
SYD3_k127_4225913_0 Protocatechuate 3,4-dioxygenase beta subunit K03381 - 1.13.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 329.0
SYD3_k127_4225913_1 FMN-dependent dehydrogenase K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 317.0
SYD3_k127_4225913_2 proline dipeptidase activity K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009372 313.0
SYD3_k127_4225913_3 [2Fe-2S] binding domain K00256,K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000003635 216.0
SYD3_k127_4225913_4 Ornithine cyclodeaminase/mu-crystallin family K01750,K18258 - 1.5.1.25,4.3.1.12 0.00000000000000000000005939 108.0
SYD3_k127_4235672_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 4.202e-222 712.0
SYD3_k127_4235672_1 hydrolases or acyltransferases, alpha beta hydrolase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005073 608.0
SYD3_k127_4235672_10 Enoyl-CoA hydratase/isomerase K01661,K07536 - 4.1.3.36 0.00000000000000000000000000000000000000000000000000000000000000009276 233.0
SYD3_k127_4235672_11 PFAM toluene tolerance K07323 - - 0.0000000000000000000000000000000000000000005774 163.0
SYD3_k127_4235672_12 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K05606 - 5.1.99.1 0.00000000000000000000000000000000008629 138.0
SYD3_k127_4235672_13 Glycine-zipper domain - - - 0.00000005062 56.0
SYD3_k127_4235672_2 Malate/L-lactate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 470.0
SYD3_k127_4235672_3 Cys/Met metabolism PLP-dependent enzyme K01760 - 4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 450.0
SYD3_k127_4235672_4 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 437.0
SYD3_k127_4235672_5 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006395 303.0
SYD3_k127_4235672_6 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003357 275.0
SYD3_k127_4235672_7 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002859 262.0
SYD3_k127_4235672_8 myo-inosose-2 dehydratase activity K00457,K06606 - 1.13.11.27,5.3.99.11 0.00000000000000000000000000000000000000000000000000000000000000000000002506 253.0
SYD3_k127_4235672_9 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000004283 234.0
SYD3_k127_4268700_0 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005203 410.0
SYD3_k127_4268700_1 peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000001169 245.0
SYD3_k127_4268700_10 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds K08641,K11206 - 3.4.13.22 0.0000000000000000000000000000000006278 148.0
SYD3_k127_4268700_11 PFAM zinc finger, DksA TraR C4-type - - - 0.000000000000000000000000000003017 124.0
SYD3_k127_4268700_12 - - - - 0.00000000000000000000006779 100.0
SYD3_k127_4268700_13 Iron-binding zinc finger CDGSH type K05710 - - 0.00000000000000000005114 91.0
SYD3_k127_4268700_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000385 229.0
SYD3_k127_4268700_3 radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000835 219.0
SYD3_k127_4268700_4 Transcriptional regulator, Crp Fnr family K21563 - - 0.000000000000000000000000000000000000000000000000000000001454 207.0
SYD3_k127_4268700_6 - - - - 0.0000000000000000000000000000000000000000000003741 171.0
SYD3_k127_4268700_7 PFAM Invasion gene expression up-regulator, SirB - - - 0.0000000000000000000000000000000000000001446 153.0
SYD3_k127_4268700_8 MarR family transcriptional regulator - - - 0.00000000000000000000000000000000009142 138.0
SYD3_k127_4268700_9 Oxidoreductase NAD-binding domain - - - 0.0000000000000000000000000000000004295 137.0
SYD3_k127_4285941_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000736 599.0
SYD3_k127_4285941_1 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 445.0
SYD3_k127_4285941_10 protein conserved in bacteria K11719 - - 0.00000000000000000000000000000000000000000000000000000007603 208.0
SYD3_k127_4285941_11 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000000000000000000000000000000000253 194.0
SYD3_k127_4285941_12 PFAM peptidase S16 lon domain protein K07157 - - 0.0000000000000000000000000000000000000000000000007128 185.0
SYD3_k127_4285941_13 Sigma 54 modulation protein K05808 - - 0.00000000000000000000000000000000000000001863 154.0
SYD3_k127_4285941_15 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000000000000000007297 144.0
SYD3_k127_4285941_16 PFAM 2-nitropropane dioxygenase NPD K00459 - 1.13.12.16 0.000000000000007323 76.0
SYD3_k127_4285941_17 - - - - 0.000000000000009391 83.0
SYD3_k127_4285941_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004621 450.0
SYD3_k127_4285941_3 Branched-chain amino acid ATP-binding cassette transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003583 393.0
SYD3_k127_4285941_4 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 384.0
SYD3_k127_4285941_5 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005346 381.0
SYD3_k127_4285941_6 COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type) K02806 - - 0.000000000000000000000000000000000000000000000000000000000005688 211.0
SYD3_k127_4285941_7 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.00000000000000000000000000000000000000000000000000000000001077 214.0
SYD3_k127_4285941_8 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000000000000000001658 206.0
SYD3_k127_4294377_0 SMART Tetratricopeptide domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 559.0
SYD3_k127_4294377_1 PFAM ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 382.0
SYD3_k127_4297860_0 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006451 597.0
SYD3_k127_4297860_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 332.0
SYD3_k127_4297860_2 Glycine-zipper domain - - - 0.000000000000000000000000000000000000000000007334 172.0
SYD3_k127_4297860_3 - - - - 0.000000000000000006154 89.0
SYD3_k127_4297860_4 Belongs to the malate synthase family K01638 - 2.3.3.9 0.000000001123 61.0
SYD3_k127_43186_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 503.0
SYD3_k127_43186_1 peptidylprolyl isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000001494 191.0
SYD3_k127_4324909_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006152,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016053,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019439,GO:0019510,GO:0019752,GO:0030554,GO:0031667,GO:0033353,GO:0034641,GO:0034655,GO:0034656,GO:0036094,GO:0036293,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046700,GO:0048037,GO:0048511,GO:0048512,GO:0050662,GO:0050667,GO:0050896,GO:0051186,GO:0051187,GO:0051287,GO:0055086,GO:0070482,GO:0071268,GO:0071704,GO:0072521,GO:0072523,GO:0097159,GO:0097458,GO:0098604,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901657,GO:1901658 3.3.1.1 1.638e-251 789.0
SYD3_k127_4324909_1 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 4.426e-204 646.0
SYD3_k127_4324909_10 Short-chain dehydrogenase reductase SDR K00059,K03793 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008667,GO:0009058,GO:0009237,GO:0009238,GO:0009239,GO:0009712,GO:0009713,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0016628,GO:0018130,GO:0018958,GO:0019184,GO:0019290,GO:0019438,GO:0019540,GO:0019748,GO:0022607,GO:0034641,GO:0042802,GO:0043043,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0046189,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.100,1.5.1.33 0.00000000000000000000000000000003317 126.0
SYD3_k127_4324909_11 translation initiation inhibitor, yjgF family K09022 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0019239,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046360,GO:0046361,GO:0046394,GO:0046459,GO:0051790,GO:0071704,GO:0072330,GO:1901576 3.5.99.10 0.0000000002954 67.0
SYD3_k127_4324909_2 Methylenetetrahydrofolate reductase K00297 GO:0000166,GO:0003674,GO:0003824,GO:0004489,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0022607,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 455.0
SYD3_k127_4324909_3 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 392.0
SYD3_k127_4324909_4 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 325.0
SYD3_k127_4324909_5 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001339 254.0
SYD3_k127_4324909_6 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls - - - 0.000000000000000000000000000000000000000000000000000000000000001483 237.0
SYD3_k127_4324909_7 NMT1/THI5 like K02051 - - 0.00000000000000000000000000000000000000000000000000003109 201.0
SYD3_k127_4324909_8 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000006528 138.0
SYD3_k127_4324909_9 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.000000000000000000000000000000002095 129.0
SYD3_k127_4327165_0 Amidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009769 621.0
SYD3_k127_4327165_1 Nitronate monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 390.0
SYD3_k127_4327165_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008502 292.0
SYD3_k127_4327165_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000016 250.0
SYD3_k127_4327165_4 Oxidoreductase family, C-terminal alpha/beta domain K19181 - 1.1.1.292 0.00000000000000000000000000000000000000000001086 175.0
SYD3_k127_4327165_5 rubredoxin - - - 0.0000000000000000000005081 107.0
SYD3_k127_4327165_6 May reduce aminoacrylate peracid to aminoacrylate. Required to remove a toxic intermediate produce by the pyrimidine nitrogen degradation K09021,K09022 GO:0006139,GO:0006206,GO:0006208,GO:0006212,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0017144,GO:0019740,GO:0019860,GO:0034641,GO:0042737,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 3.5.99.10 0.00000000000000000002748 98.0
SYD3_k127_4327594_0 ABC transporter transmembrane region - - - 1.63e-237 754.0
SYD3_k127_4327594_1 DNA Topoisomerase K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 381.0
SYD3_k127_4327594_2 Belongs to the GcvT family K06980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 323.0
SYD3_k127_4327594_3 Transport and Golgi organisation 2 - - - 0.00000000000000000000000000000000000000000000002077 175.0
SYD3_k127_4327594_4 Domain of unknown function (DUF4936) - - - 0.00000000000001158 77.0
SYD3_k127_4328860_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01576,K01652 - 2.2.1.6,4.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 599.0
SYD3_k127_4328860_1 Thiamine pyrophosphate enzyme, central domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 503.0
SYD3_k127_4328860_10 lipid kinase activity - - - 0.000000000000000000000000000000000000000000000000000000009066 211.0
SYD3_k127_4328860_11 Carbon monoxide dehydrogenase subunit G (CoxG) - - - 0.0000000000000000000000000000000000000641 147.0
SYD3_k127_4328860_12 Domain of unknown function (DUF1932) K00020 - 1.1.1.31 0.000000000000000000000000000000000006307 149.0
SYD3_k127_4328860_13 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000007466 145.0
SYD3_k127_4328860_14 PFAM Peptidase M23 - - - 0.000002317 53.0
SYD3_k127_4328860_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004021 369.0
SYD3_k127_4328860_3 Tripartite tricarboxylate transporter family receptor K07795 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914 357.0
SYD3_k127_4328860_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 349.0
SYD3_k127_4328860_5 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 305.0
SYD3_k127_4328860_6 Belongs to the HpcH HpaI aldolase family K00979,K02510 - 2.7.7.38,4.1.2.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001115 287.0
SYD3_k127_4328860_7 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002808 298.0
SYD3_k127_4328860_8 Bacterial periplasmic substrate-binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001836 282.0
SYD3_k127_4328860_9 PFAM extracellular solute-binding protein family 1 K02020,K22003 - 5.3.3.7 0.0000000000000000000000000000000000000000000000000000000004706 214.0
SYD3_k127_4333098_0 zinc-ribbon domain - - - 0.000000000000000000000000000000000000000001772 167.0
SYD3_k127_4333098_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000216 141.0
SYD3_k127_4339148_0 PFAM Cytochrome oxidase assembly K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 329.0
SYD3_k127_4339148_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006317 275.0
SYD3_k127_4339148_2 signal sequence binding - - - 0.00000000000008457 73.0
SYD3_k127_4352484_0 TRAP transporter, 4TM 12TM fusion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004242 440.0
SYD3_k127_4352484_1 TRAP transporter, solute receptor (TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 386.0
SYD3_k127_4352484_2 TRAP-type C4-dicarboxylate transport system, large permease K11690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004098 280.0
SYD3_k127_4352484_3 Trap-type c4-dicarboxylate transport system, small permease component K11689,K21394 - - 0.0000000007689 67.0
SYD3_k127_4352484_4 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.000002085 59.0
SYD3_k127_4355740_0 ferredoxin K00172 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000001761 254.0
SYD3_k127_4355740_1 Pyruvate synthase K00169 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000001835 236.0
SYD3_k127_4358192_0 Malic enzyme K00029 - 1.1.1.40 0.0 1061.0
SYD3_k127_4358192_1 PrkA AAA domain K07180 - - 1.12e-321 997.0
SYD3_k127_4358192_10 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 601.0
SYD3_k127_4358192_11 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 562.0
SYD3_k127_4358192_12 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 536.0
SYD3_k127_4358192_13 PFAM Peptidase M48 K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003807 524.0
SYD3_k127_4358192_14 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 509.0
SYD3_k127_4358192_15 Protein of unknown function (DUF444) K09786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 452.0
SYD3_k127_4358192_16 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002572 448.0
SYD3_k127_4358192_17 PFAM amidohydrolase 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000417 400.0
SYD3_k127_4358192_18 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004448 396.0
SYD3_k127_4358192_19 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000472 321.0
SYD3_k127_4358192_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 7.526e-245 759.0
SYD3_k127_4358192_20 Taurine catabolism dioxygenase TauD, TfdA family K03119 - 1.14.11.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 319.0
SYD3_k127_4358192_21 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 309.0
SYD3_k127_4358192_22 PFAM amine oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 309.0
SYD3_k127_4358192_23 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 302.0
SYD3_k127_4358192_24 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003466 298.0
SYD3_k127_4358192_25 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 287.0
SYD3_k127_4358192_26 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001502 274.0
SYD3_k127_4358192_27 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000223 280.0
SYD3_k127_4358192_28 short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004615 271.0
SYD3_k127_4358192_29 thiolester hydrolase activity K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000189 257.0
SYD3_k127_4358192_3 Carbohydrate phosphorylase K00688 - 2.4.1.1 7.962e-245 767.0
SYD3_k127_4358192_30 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781 - 5.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000008027 245.0
SYD3_k127_4358192_31 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000263 239.0
SYD3_k127_4358192_32 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000000000000003373 210.0
SYD3_k127_4358192_33 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000000000000000000006706 191.0
SYD3_k127_4358192_34 Etoposide-induced protein 2.4 (EI24) - - - 0.000000000000000000000000000000000000000000000000000007331 198.0
SYD3_k127_4358192_35 NUDIX domain - - - 0.00000000000000000000000000000000000000000000000002373 187.0
SYD3_k127_4358192_36 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000000000000000000000092 179.0
SYD3_k127_4358192_37 PFAM transcription elongation factor GreA GreB - - - 0.000000000000000000000000000000000000000000000003827 179.0
SYD3_k127_4358192_38 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000003186 176.0
SYD3_k127_4358192_39 - - - - 0.00000000000000000000000000000000000000000000007242 173.0
SYD3_k127_4358192_4 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 4.684e-221 693.0
SYD3_k127_4358192_40 PFAM Ankyrin K10799 - 2.4.2.30 0.000000000000000000000000000000000000000000000177 183.0
SYD3_k127_4358192_41 ACT domain protein K00003,K00058,K01754,K04767 - 1.1.1.3,1.1.1.399,1.1.1.95,4.3.1.19 0.000000000000000000000000000000000000000005779 158.0
SYD3_k127_4358192_42 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000005825 160.0
SYD3_k127_4358192_43 Binds the 23S rRNA K02909 - - 0.000000000000000000000000000002184 121.0
SYD3_k127_4358192_44 Protein of unknown function (DUF3301) - - - 0.00000000000000000000004493 102.0
SYD3_k127_4358192_45 PFAM zinc finger DksA TraR C4-type - - - 0.00000000000000000000004701 103.0
SYD3_k127_4358192_46 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000002426 94.0
SYD3_k127_4358192_47 - - - - 0.0000000000000002009 84.0
SYD3_k127_4358192_48 - - - - 0.00000000000000571 85.0
SYD3_k127_4358192_49 LTXXQ motif family protein - - - 0.0000000002388 71.0
SYD3_k127_4358192_5 SpoVR like protein K06415 - - 4.789e-216 679.0
SYD3_k127_4358192_50 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000008183 68.0
SYD3_k127_4358192_51 Protein of unknown function (DUF2846) - - - 0.000000001178 65.0
SYD3_k127_4358192_52 Protein of unknown function (DUF2846) - - - 0.000000002353 65.0
SYD3_k127_4358192_53 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.00000002158 58.0
SYD3_k127_4358192_54 SOS response associated peptidase (SRAP) - - - 0.0000003487 63.0
SYD3_k127_4358192_6 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 7.228e-211 668.0
SYD3_k127_4358192_7 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 2.008e-197 619.0
SYD3_k127_4358192_8 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K01810 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 5.3.1.9 2.962e-197 632.0
SYD3_k127_4358192_9 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 5.264e-196 621.0
SYD3_k127_4372396_0 Catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 511.0
SYD3_k127_4372396_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005867 455.0
SYD3_k127_4372396_2 NMT1-like family K07080 - - 0.00000000000000000000000000000000000000000000000000000001478 211.0
SYD3_k127_4372396_3 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 0.00000000000000000000000000000000004488 135.0
SYD3_k127_438754_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 2.046e-248 775.0
SYD3_k127_438754_1 PFAM Colicin V production protein K03558 - - 0.0000000000000000000000000000000000000000007323 162.0
SYD3_k127_438754_2 protein conserved in bacteria K03749 - - 0.0003504 43.0
SYD3_k127_4401145_0 synthesis repressor, PhaR - - - 0.0000000000000000000000000000000000000000000000000000000000000000002303 235.0
SYD3_k127_4401145_1 Phasin protein - - - 0.000000000000000000000000371 111.0
SYD3_k127_4405575_0 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 339.0
SYD3_k127_4405575_1 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000009066 186.0
SYD3_k127_4408797_0 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002851 287.0
SYD3_k127_4408797_1 Cysteine-rich motif following a subset of SET domains K07117 - - 0.000000000000000000000000000000000000000000000005636 177.0
SYD3_k127_4408797_2 Lysin motif - - - 0.0000000000000000000000000000000000001742 153.0
SYD3_k127_4408797_3 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.0000000000000000000001718 102.0
SYD3_k127_4408797_4 Belongs to the IlvD Edd family K01687,K22186 - 4.2.1.82,4.2.1.9 0.00000000001744 64.0
SYD3_k127_4418616_0 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001591 274.0
SYD3_k127_4418616_1 PFAM amidohydrolase 2 K03392 - 4.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000005624 267.0
SYD3_k127_4418616_2 Belongs to the peptidase S24 family K01356 - 3.4.21.88 0.00000000000005362 72.0
SYD3_k127_4438037_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 6.314e-219 706.0
SYD3_k127_4438037_1 N-acetylmuramoyl-L-alanine amidase K01447,K11066 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001133 275.0
SYD3_k127_4438037_2 PFAM Nitrile hydratase alpha K01721,K20762 - 3.5.5.8,4.2.1.84 0.00000000000000000000000000000000000000000000000000000000000000000000000008166 257.0
SYD3_k127_4438037_3 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.000000000000000000000000000002539 128.0
SYD3_k127_4438037_4 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.00000000000001519 80.0
SYD3_k127_4445370_0 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001932 279.0
SYD3_k127_4445370_1 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000009452 245.0
SYD3_k127_4445370_2 PFAM ATP-binding region, ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000008315 200.0
SYD3_k127_4445370_3 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000004264 179.0
SYD3_k127_4445370_4 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000003535 111.0
SYD3_k127_4461092_0 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 361.0
SYD3_k127_4461092_1 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000004408 222.0
SYD3_k127_4461092_2 methyltransferase K03437 - - 0.00000000000000000000000000000000000000000000000001655 186.0
SYD3_k127_4489572_0 Large family of predicted nucleotide-binding domains K07175 - - 4.622e-257 798.0
SYD3_k127_4489572_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 6.035e-195 617.0
SYD3_k127_4489572_2 PFAM Alkyl hydroperoxide reductase K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000002599 230.0
SYD3_k127_4489572_3 binds to the 23S rRNA K02939 - - 0.00000000000000000000000000000000000000000000000000000001984 200.0
SYD3_k127_4489572_4 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000000000001683 137.0
SYD3_k127_4493034_0 Amidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 539.0
SYD3_k127_4493034_1 Cupin domain - - - 0.000000004147 63.0
SYD3_k127_4494074_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 448.0
SYD3_k127_4494749_0 COG0665 Glycine D-amino acid oxidases (deaminating) K00285 - 1.4.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000005237 267.0
SYD3_k127_4494749_1 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 0.0000000000000000000000000000001481 125.0
SYD3_k127_4523193_0 Phage integrase, N-terminal SAM-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005117 409.0
SYD3_k127_4523193_1 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003054 349.0
SYD3_k127_4551351_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 473.0
SYD3_k127_4551351_1 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008497 304.0
SYD3_k127_4551351_2 Metal-dependent hydrolase K07043 - - 0.00000000000000000000000000000000000000000000000002853 188.0
SYD3_k127_4551351_3 Polynucleotide kinase 3 phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.000000000000000000000000003279 112.0
SYD3_k127_4555407_0 40-residue yvtn family beta-propeller repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000008878 234.0
SYD3_k127_4555407_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.000000000000000000000000000000000000000002592 162.0
SYD3_k127_4555407_2 AraC-like ligand binding domain - - - 0.000000000000000000001866 100.0
SYD3_k127_45676_0 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 372.0
SYD3_k127_45676_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00520,K21739 - 1.16.1.1 0.0000000000000000000003958 96.0
SYD3_k127_4583328_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000292 217.0
SYD3_k127_4590494_0 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 373.0
SYD3_k127_4590494_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000008884 242.0
SYD3_k127_4602376_0 Amidase K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003811 527.0
SYD3_k127_4602376_1 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 298.0
SYD3_k127_4602376_2 Tripartite tricarboxylate transporter family receptor K07795 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001018 268.0
SYD3_k127_4602376_3 Tripartite tricarboxylate transporter TctA family - - - 0.000000000000000000000000000000000000000000000000000000000004901 210.0
SYD3_k127_4602376_4 Bacterial extracellular solute-binding protein K02020 - - 0.000000000000000000000000000000000000000000001629 173.0
SYD3_k127_4602376_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.000000000000000000000000000000000000003404 149.0
SYD3_k127_4602376_7 - - - - 0.0000001842 62.0
SYD3_k127_461613_0 Participates in both transcription termination and antitermination K02600 - - 1.517e-240 751.0
SYD3_k127_461613_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 447.0
SYD3_k127_4648456_0 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005449 370.0
SYD3_k127_4648456_1 Histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 369.0
SYD3_k127_4648456_2 Two component transcriptional regulator, winged helix family K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 297.0
SYD3_k127_4648456_3 Major facilitator superfamily - - - 0.000000000000000000000000000005081 121.0
SYD3_k127_4667439_0 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 291.0
SYD3_k127_4667439_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00520,K21739 - 1.16.1.1 0.00000000000000000000000000000000000000000000000000000000000104 217.0
SYD3_k127_4727797_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 5.2e-229 722.0
SYD3_k127_4727797_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 1.32e-205 649.0
SYD3_k127_4727797_2 PFAM Alanine dehydrogenase PNT K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000572 508.0
SYD3_k127_4727797_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 479.0
SYD3_k127_4727797_4 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 391.0
SYD3_k127_4727797_5 4TM region of pyridine nucleotide transhydrogenase, mitoch K00322,K00324 - 1.6.1.1,1.6.1.2 0.000000000000000000000000000000000000009912 147.0
SYD3_k127_4727797_6 Staphylococcal nuclease homologues - - - 0.00000000000000003059 83.0
SYD3_k127_4728559_0 Carbon-nitrogen hydrolase K01501,K01502 - 3.5.5.1,3.5.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 469.0
SYD3_k127_4728559_1 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 337.0
SYD3_k127_4728559_2 Maleate cis-trans isomerase K01799 - 5.2.1.1 0.00000303 57.0
SYD3_k127_4728916_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 2.354e-238 743.0
SYD3_k127_4728916_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003635 565.0
SYD3_k127_4728916_2 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003755 527.0
SYD3_k127_4728916_3 pilus assembly protein FimV K08086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 387.0
SYD3_k127_4728916_4 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000457 352.0
SYD3_k127_4728916_5 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 346.0
SYD3_k127_4728916_6 pilus assembly protein FimV K08086 - - 0.00000000000000000000000000000000000000000000000000000000000000000001729 245.0
SYD3_k127_4728916_7 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000857 177.0
SYD3_k127_4738719_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 GO:0000104,GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 4.754e-283 876.0
SYD3_k127_4738719_1 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 431.0
SYD3_k127_4738719_2 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003034 366.0
SYD3_k127_4738719_3 Flavinator of succinate dehydrogenase K09159 - - 0.000000000000104 76.0
SYD3_k127_477349_0 NADH Ubiquinone plastoquinone (Complex I) K05561 - - 1.084e-201 640.0
SYD3_k127_477349_1 Phosphonate ABC transporter K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008012 390.0
SYD3_k127_477349_10 Protein of unknown function (DUF3014) - - - 0.000000000000000000000000000000000000000000000000000000000003033 218.0
SYD3_k127_477349_11 antiporter K05562 - - 0.000000000000000000000000000000000000000000000000000000874 196.0
SYD3_k127_477349_12 PFAM Na H antiporter subunit K05564 - - 0.0000000000000000000000000000000000001589 153.0
SYD3_k127_477349_13 Belongs to the P(II) protein family - - - 0.00000000000000000000000000000000001836 142.0
SYD3_k127_477349_14 Subunit F of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali K05563 - - 0.00000000000000000000000000000002822 128.0
SYD3_k127_477349_15 - - - - 0.0000000000000000000000004383 110.0
SYD3_k127_477349_2 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 338.0
SYD3_k127_477349_3 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 331.0
SYD3_k127_477349_4 Protein of unknown function (DUF1538) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006701 301.0
SYD3_k127_477349_5 COG3639 ABC-type phosphate phosphonate transport system, permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001922 271.0
SYD3_k127_477349_6 TIGRFAM Haloacid Dehalogenase Superfamily Class (subfamily) IIA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003972 268.0
SYD3_k127_477349_7 Protein of unknown function (DUF1538) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001789 263.0
SYD3_k127_477349_8 COG3639 ABC-type phosphate phosphonate transport system, permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006695 265.0
SYD3_k127_477349_9 Belongs to the HpcH HpaI aldolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001728 254.0
SYD3_k127_477427_0 Coenzyme A transferase K01039 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000005592 228.0
SYD3_k127_477427_1 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01028,K01039 - 2.8.3.12,2.8.3.5 0.000000000000000000000000000000000000000002362 161.0
SYD3_k127_477427_2 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit K01040 - 2.8.3.12 0.000000000000000000000000000000000000000005868 157.0
SYD3_k127_4781264_0 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 313.0
SYD3_k127_4781264_1 Belongs to the GST superfamily K00799,K11209 - 2.5.1.18 0.00000000000006336 78.0
SYD3_k127_4797378_0 Amidohydrolase family K01485 - 3.5.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 411.0
SYD3_k127_4797378_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001344 282.0
SYD3_k127_4797378_2 COG0656 Aldo keto reductases, related to diketogulonate reductase K06222 - 1.1.1.346 0.000000000000000000000000000000000000000000000000000000000000000000003247 244.0
SYD3_k127_4797378_3 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000006966 237.0
SYD3_k127_4797378_4 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000003155 177.0
SYD3_k127_4799307_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 440.0
SYD3_k127_4799307_1 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.00000000000000000000000000000000000000000000000000000000000000003194 235.0
SYD3_k127_4816771_0 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004996 460.0
SYD3_k127_4816771_1 C4-dicarboxylate ABC transporter permease - - - 0.000000000000000000000000000000000000000000000000000000000000000002286 239.0
SYD3_k127_4816771_2 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000001582 102.0
SYD3_k127_4816771_3 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.000000007438 57.0
SYD3_k127_4826911_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1187.0
SYD3_k127_4826911_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 5.827e-319 1000.0
SYD3_k127_4826911_10 Class II Aldolase and Adducin N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 359.0
SYD3_k127_4826911_11 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 343.0
SYD3_k127_4826911_12 (2R)-phospho-3-sulfolactate synthase (ComA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002623 282.0
SYD3_k127_4826911_13 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000000000001374 235.0
SYD3_k127_4826911_14 riboflavin synthase, alpha K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000002058 229.0
SYD3_k127_4826911_15 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000000002543 224.0
SYD3_k127_4826911_16 Belongs to the CinA family K03743 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000008294 210.0
SYD3_k127_4826911_17 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.0000000000000000000000000000000000000000000000000000007959 196.0
SYD3_k127_4826911_18 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000000008578 177.0
SYD3_k127_4826911_19 AraC-like ligand binding domain - - - 0.0000000000000000000000000000000000000000000009957 170.0
SYD3_k127_4826911_2 COG1053 Succinate dehydrogenase fumarate reductase flavoprotein subunit K13796 - - 2.759e-237 742.0
SYD3_k127_4826911_20 SnoaL-like domain - - - 0.000000000000000000000000000000000001525 143.0
SYD3_k127_4826911_21 Modulates RecA activity K03565 - - 0.0000000000000000000000000000000002766 137.0
SYD3_k127_4826911_22 - - - - 0.000000000000000000000000001143 115.0
SYD3_k127_4826911_23 Zinc-finger domain - - - 0.000000000000000000000000002829 113.0
SYD3_k127_4826911_3 phosphoglucomutase phosphomannomutase alpha beta alpha domain II K01835,K01840,K15778 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005488,GO:0005975,GO:0005976,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009244,GO:0009311,GO:0009312,GO:0009405,GO:0009987,GO:0016051,GO:0016053,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0042120,GO:0042121,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044419,GO:0046394,GO:0046401,GO:0046402,GO:0046872,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.4.2.2,5.4.2.8 2.259e-220 691.0
SYD3_k127_4826911_4 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004474 582.0
SYD3_k127_4826911_5 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 510.0
SYD3_k127_4826911_6 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 498.0
SYD3_k127_4826911_7 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 499.0
SYD3_k127_4826911_8 Alpha beta hydrolase K07019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 406.0
SYD3_k127_4826911_9 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007645 379.0
SYD3_k127_4831516_0 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007389 396.0
SYD3_k127_4831516_1 protein conserved in bacteria K09921 - - 0.000000000000000000000000000000000000000000000000000000000000000000009265 246.0
SYD3_k127_4831516_2 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.00000000000000000000000000000000000000000000000000000000000000001083 225.0
SYD3_k127_4831516_3 coa-binding K06929 - - 0.000000000000000000000000000000000000000000000008695 176.0
SYD3_k127_4831516_4 FR47-like protein - - - 0.000000000000000000000000000000000000001142 158.0
SYD3_k127_4861279_0 glutaminyl-tRNA K01886 - 6.1.1.18 4.909e-242 757.0
SYD3_k127_4861279_1 Belongs to the peptidase S51 family K05995 - 3.4.13.21 0.000000000000000000000000000000000000000000000000000000000000000000000000002191 259.0
SYD3_k127_4878140_0 Dienelactone hydrolase family - - - 0.000000000000000000000000000000000000006179 158.0
SYD3_k127_4878140_1 Domain of unknown function (DUF4139) - - - 0.00000000000000000000000000000005128 126.0
SYD3_k127_4878140_2 Protein of unknown function (DUF2848) - - - 0.0000000000000000536 81.0
SYD3_k127_4878140_3 Domain of unknown function (DUF4139) - - - 0.0000000001829 71.0
SYD3_k127_4878140_4 - - - - 0.000003845 55.0
SYD3_k127_4922414_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 4.115e-205 663.0
SYD3_k127_4922414_1 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 293.0
SYD3_k127_4922414_2 protein conserved in bacteria - - - 0.000000000000000000000000001919 115.0
SYD3_k127_4922414_3 Protein conserved in bacteria - - - 0.0000006868 51.0
SYD3_k127_4940540_0 TIGRFAM glutamine synthetase, type I K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 8.774e-259 802.0
SYD3_k127_4940540_1 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007109 367.0
SYD3_k127_4940540_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 329.0
SYD3_k127_4940540_3 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000005317 228.0
SYD3_k127_4940540_4 - - - - 0.00000000000000001624 87.0
SYD3_k127_4957624_0 von Willebrand factor (vWF) type A domain - - - 1.027e-237 760.0
SYD3_k127_4957624_1 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008757 264.0
SYD3_k127_4957624_2 PFAM ATPase associated with various cellular activities K04748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000284 256.0
SYD3_k127_5006319_0 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006725 300.0
SYD3_k127_5006319_1 Domain of unknown function (DUF4387) - - - 0.00000000000003038 74.0
SYD3_k127_5006319_2 MmgE PrpD family protein - - - 0.00000000007519 67.0
SYD3_k127_504292_0 Belongs to the mandelate racemase muconate lactonizing enzyme family K22209 - 4.2.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006255 457.0
SYD3_k127_504292_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 319.0
SYD3_k127_504292_2 Methyltransferase type 11 - - - 0.00000000001775 69.0
SYD3_k127_5106198_0 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005905 263.0
SYD3_k127_5106198_1 Asp Glu hydantoin racemase - - - 0.0000000000000000000000000000000000000000000000000000000009783 208.0
SYD3_k127_5106198_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000006028 89.0
SYD3_k127_5106198_3 Isocitrate/isopropylmalate dehydrogenase K00030,K00031 - 1.1.1.41,1.1.1.42 0.0000000004903 67.0
SYD3_k127_5106198_4 PFAM amidohydrolase 2 - - - 0.0000001996 53.0
SYD3_k127_5107935_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 574.0
SYD3_k127_5107935_1 Haloacid dehalogenase-like hydrolase K20866 - 3.1.3.10 0.00000000000000000000000000000000000000009454 155.0
SYD3_k127_5107935_2 gluconolactonase K01053,K14274 - 3.1.1.17 0.0000000000000000000000000003377 120.0
SYD3_k127_5133746_0 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006836 325.0
SYD3_k127_5133746_1 protein involved in tolerance to divalent cations K03926 - - 0.00000009989 53.0
SYD3_k127_522588_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006642 353.0
SYD3_k127_522588_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 351.0
SYD3_k127_52416_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 1.685e-208 674.0
SYD3_k127_52416_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD K03581 - 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008756 509.0
SYD3_k127_5310683_0 Tripartite tricarboxylate transporter family receptor K07795 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003663 270.0
SYD3_k127_5310683_1 Cupin 2, conserved barrel domain protein K11312 - - 0.00000000000000000000009755 104.0
SYD3_k127_534111_0 CoA-substrate-specific enzyme activase - - - 0.0 1140.0
SYD3_k127_534111_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 447.0
SYD3_k127_534111_2 NlpB/DapX lipoprotein K07287 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 428.0
SYD3_k127_534111_3 Fatty acid hydroxylase superfamily - - - 0.000002345 56.0
SYD3_k127_541004_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 1.737e-310 969.0
SYD3_k127_541004_1 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001485 250.0
SYD3_k127_5448259_0 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 451.0
SYD3_k127_5448259_1 Protein of unknown function (DUF3501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003544 274.0
SYD3_k127_5448259_2 Cysteine-rich domain - - - 0.0000000000000000000000000000000000000000000000000000000006265 202.0
SYD3_k127_5448259_3 CNP1-like family - - - 0.0000000000000000000000000000000000000000004489 169.0
SYD3_k127_5448259_4 Protein of unknown function (DUF3617) - - - 0.000000000005925 70.0
SYD3_k127_5451691_0 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000002788 164.0
SYD3_k127_5451691_1 Transport and Golgi organisation 2 - - - 0.0000000000000000000000000000000000000009779 152.0
SYD3_k127_5451691_2 Class II Aldolase and Adducin N-terminal domain - - - 0.000000000000162 71.0
SYD3_k127_5452614_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 585.0
SYD3_k127_5452614_1 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 506.0
SYD3_k127_5452614_2 Elongation factor SelB, winged helix K03833 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004803 273.0
SYD3_k127_5452614_3 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000001964 196.0
SYD3_k127_5454279_0 FMN-dependent dehydrogenase K00101,K15054 - 1.1.2.3,1.1.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008685 437.0
SYD3_k127_5454279_1 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000006399 198.0
SYD3_k127_5457254_0 pfkB family carbohydrate kinase K00852,K00856 - 2.7.1.15,2.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 427.0
SYD3_k127_5457254_1 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.000000000000000000000000000000000000000000006167 166.0
SYD3_k127_5458799_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 521.0
SYD3_k127_5458799_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 312.0
SYD3_k127_5462553_0 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 473.0
SYD3_k127_5462553_1 FIST N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 471.0
SYD3_k127_5462553_10 PFAM FecR protein - - - 0.0006438 51.0
SYD3_k127_5462553_2 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004548 396.0
SYD3_k127_5462553_3 Adenylate cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006768 389.0
SYD3_k127_5462553_4 CHAT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 388.0
SYD3_k127_5462553_5 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005411 330.0
SYD3_k127_5462553_6 Histidine kinase K07711 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003228 275.0
SYD3_k127_5462553_7 membrane - - - 0.0000000000000000000000000000000000000000000000000000002459 212.0
SYD3_k127_5462553_8 cheY-homologous receiver domain - - - 0.0000000000000000000000000005258 118.0
SYD3_k127_54633_0 Belongs to the UPF0255 family - - - 0.000000000000000000003233 108.0
SYD3_k127_5464481_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K22015 - 1.17.1.9,1.17.99.7 0.0 1349.0
SYD3_k127_5464481_1 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000001672 183.0
SYD3_k127_5464481_2 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 0.00000000007725 64.0
SYD3_k127_5467226_0 ABC transporter K12541 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 331.0
SYD3_k127_5467226_1 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000002059 210.0
SYD3_k127_5471932_0 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 349.0
SYD3_k127_5471932_1 FAD dependent oxidoreductase K00285 - 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005063 300.0
SYD3_k127_5471932_2 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001198 284.0
SYD3_k127_5471932_3 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000008845 208.0
SYD3_k127_5471932_4 GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000004974 214.0
SYD3_k127_5472127_0 Acetamidase/Formamidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000311 295.0
SYD3_k127_5472127_1 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.000000000000000000000000000000000002637 143.0
SYD3_k127_5472127_2 flavin adenine dinucleotide binding - - - 0.00000000000000000000000000000000509 137.0
SYD3_k127_5472127_3 Thioesterase superfamily - - - 0.000000000000000000000000004104 118.0
SYD3_k127_5472131_0 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.000000000000000000000000000000000000001457 157.0
SYD3_k127_5472131_1 flavin adenine dinucleotide binding - - - 0.0000000000257 69.0
SYD3_k127_5478101_0 - - - - 0.00000000000000000000000000000000001383 148.0
SYD3_k127_5478101_1 - - - - 0.00000000000000001218 88.0
SYD3_k127_5480080_0 Molecular chaperone. Has ATPase activity K04079 - - 4.085e-282 875.0
SYD3_k127_5480080_1 ABC-type Fe3 transport system permease component K02011 - - 7.396e-241 756.0
SYD3_k127_5480080_2 extracellular solute-binding protein, family 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008355 562.0
SYD3_k127_5480080_3 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004981 452.0
SYD3_k127_5480080_4 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 435.0
SYD3_k127_5480080_5 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000000000003476 219.0
SYD3_k127_5480080_6 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000000001936 213.0
SYD3_k127_5480080_7 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.00000000000000000002097 96.0
SYD3_k127_5486030_0 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000499 306.0
SYD3_k127_5486030_1 protein histidine kinase activity - - - 0.000000000000000003642 96.0
SYD3_k127_5486030_2 Histidine kinase - - - 0.0000000002458 66.0
SYD3_k127_5493539_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.0 1047.0
SYD3_k127_5493539_1 PFAM Malic enzyme, NAD binding domain K00029 - 1.1.1.40 1.287e-219 690.0
SYD3_k127_5493539_2 thymidine phosphorylase K00758 - 2.4.2.4 1.445e-203 644.0
SYD3_k127_5493539_3 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000000000000000000000000000000000000000000002299 234.0
SYD3_k127_5493539_4 Copper binding proteins, plastocyanin/azurin family - - - 0.00000000000000000000000000000000000000000000000000002876 195.0
SYD3_k127_5493539_5 Copper binding periplasmic protein CusF - - - 0.000000000000000000000001252 110.0
SYD3_k127_5493539_7 Multicopper oxidase K22348 - 1.16.3.3 0.0000000815 54.0
SYD3_k127_5496155_0 Coenzyme A transferase K01027,K01029,K01032 - 2.8.3.5,2.8.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 534.0
SYD3_k127_5496155_1 mandelate racemase muconate lactonizing K01856,K02549 - 4.2.1.113,5.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 295.0
SYD3_k127_5496155_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000001473 196.0
SYD3_k127_5497308_0 4Fe-4S dicluster domain K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 363.0
SYD3_k127_5497308_1 - - - - 0.0000000000000000000000000000001173 129.0
SYD3_k127_5502516_0 COG1132 ABC-type multidrug transport system, ATPase and permease components K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 412.0
SYD3_k127_5502516_1 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000006411 199.0
SYD3_k127_5502713_0 Na H antiporter MnhB subunit-related protein K05559 - - 0.0 1371.0
SYD3_k127_5502713_1 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 531.0
SYD3_k127_5502713_10 Methyltransferase domain - - - 0.000000000000000000000000000000000000000008306 156.0
SYD3_k127_5502713_11 Domain of unknown function (DUF4387) - - - 0.0000000000000000000000000004646 115.0
SYD3_k127_5502713_12 - - - - 0.0000000000000000000000424 108.0
SYD3_k127_5502713_13 - - - - 0.0000000000000000001167 90.0
SYD3_k127_5502713_14 Proton-conducting membrane transporter K05561 - - 0.00002305 53.0
SYD3_k127_5502713_2 Acyclic terpene utilisation family protein AtuA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 475.0
SYD3_k127_5502713_3 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035 331.0
SYD3_k127_5502713_4 PFAM Acyl-CoA dehydrogenase type 2 K16047 - 1.14.14.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 301.0
SYD3_k127_5502713_5 PFAM Taurine catabolism dioxygenase TauD TfdA K03119 - 1.14.11.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000009107 265.0
SYD3_k127_5502713_6 Acetolactate synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004898 273.0
SYD3_k127_5502713_7 Carboxymuconolactone decarboxylase - - - 0.0000000000000000000000000000000000000000000000000000000000007616 215.0
SYD3_k127_5502713_8 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000001641 199.0
SYD3_k127_5502713_9 PFAM NADH-ubiquinone oxidoreductase chain 4L K05560 - - 0.0000000000000000000000000000000000000000000000005343 184.0
SYD3_k127_5502917_0 protein conserved in bacteria K07793 - - 9.718e-264 819.0
SYD3_k127_5502917_1 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005688 276.0
SYD3_k127_5502917_2 Belongs to the TPP enzyme family K01577 - 4.1.1.8 0.000000000000000000000000000000000000002364 149.0
SYD3_k127_5502917_3 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000000000000000000000003881 145.0
SYD3_k127_5511689_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 391.0
SYD3_k127_5511689_1 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 376.0
SYD3_k127_5511689_2 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000006539 244.0
SYD3_k127_5521995_0 Exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007705 510.0
SYD3_k127_5521995_1 SMART CBS domain containing protein K07182 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 463.0
SYD3_k127_5553818_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000046 250.0
SYD3_k127_5553818_1 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000008462 153.0
SYD3_k127_5555867_0 Belongs to the MEMO1 family K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 318.0
SYD3_k127_5555867_1 PFAM AMMECR1 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000004459 228.0
SYD3_k127_5555867_2 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000925 227.0
SYD3_k127_5555867_3 Radical SAM superfamily K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000008994 213.0
SYD3_k127_5561956_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 550.0
SYD3_k127_5575063_0 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004788 332.0
SYD3_k127_5575063_1 Alpha amylase, catalytic domain K06044 - 5.4.99.15 0.00000000000000000000001133 105.0
SYD3_k127_5575063_2 PFAM Glycosyl transferase, family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.0000000000000000001967 92.0
SYD3_k127_557535_0 Adenylate cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 386.0
SYD3_k127_557535_1 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006646 341.0
SYD3_k127_557535_2 filamentous hemagglutinin family N-terminal domain - - - 0.000000000000000000003563 100.0
SYD3_k127_5576440_0 Histidine kinase - - - 0.0 1210.0
SYD3_k127_5576440_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000639 363.0
SYD3_k127_5577547_0 Patatin-like phospholipase K07001 - - 1.367e-219 703.0
SYD3_k127_5577547_1 Sulfatase K01130 - 3.1.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 606.0
SYD3_k127_5577547_2 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002607 254.0
SYD3_k127_5577547_4 Domain of unknown function (DUF202) K00389 - - 0.000000000000000000000000000000000000000000000001708 181.0
SYD3_k127_557857_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 313.0
SYD3_k127_557857_1 Response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000005412 231.0
SYD3_k127_5591163_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 6.998e-311 969.0
SYD3_k127_5591163_1 Transport of potassium into the cell K03549 - - 6.38e-197 632.0
SYD3_k127_5591163_2 Transcriptional regulator K03576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008163 460.0
SYD3_k127_5591163_3 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 376.0
SYD3_k127_5591163_4 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005448 309.0
SYD3_k127_5591163_5 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000784 290.0
SYD3_k127_5591862_0 Belongs to the mandelate racemase muconate lactonizing enzyme family K19802 - 5.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 495.0
SYD3_k127_5591862_1 Aminotransferase class-III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007223 478.0
SYD3_k127_5591862_2 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 348.0
SYD3_k127_5591862_3 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 318.0
SYD3_k127_5591862_4 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K03119 - 1.14.11.17 0.00000000000000000000002404 104.0
SYD3_k127_5591862_5 YCII-related domain K09780 - - 0.00000000000000000005144 93.0
SYD3_k127_5592298_0 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714,K21062 - 3.5.4.22,4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000107 252.0
SYD3_k127_5592298_1 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.0000000000000000000000000000000000000000000000000000000000000002354 224.0
SYD3_k127_5592298_2 Short-chain dehydrogenase reductase sdr - - - 0.00000000000000000000000000000000000000000000000000000000000608 217.0
SYD3_k127_5592298_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000002755 121.0
SYD3_k127_5592298_4 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.0000000000000000000002483 98.0
SYD3_k127_5593976_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008371 524.0
SYD3_k127_5593976_1 Spermidine synthase K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000001622 262.0
SYD3_k127_5597850_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.0 1072.0
SYD3_k127_5597850_1 protein synthesis factor, GTP-binding K06207 - - 5.881e-311 962.0
SYD3_k127_5597850_10 methyltransferase K00570 - 2.1.1.17,2.1.1.71 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 285.0
SYD3_k127_5597850_11 major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009303 262.0
SYD3_k127_5597850_12 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005894 261.0
SYD3_k127_5597850_13 [2Fe-2S] binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002083 254.0
SYD3_k127_5597850_14 Aspartate ammonia-lyase K01744 - 4.3.1.1 0.00000000000000000000004543 100.0
SYD3_k127_5597850_2 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 3.697e-257 799.0
SYD3_k127_5597850_3 Belongs to the peptidase M20A family. ArgE subfamily K01438 - 3.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 456.0
SYD3_k127_5597850_4 ABC transporter K10004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 390.0
SYD3_k127_5597850_5 Bacterial periplasmic substrate-binding proteins K02030,K10001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 392.0
SYD3_k127_5597850_6 The glycine cleavage system catalyzes the degradation of glycine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 353.0
SYD3_k127_5597850_7 ABC transporter permease K02029,K10003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007177 326.0
SYD3_k127_5597850_8 With GltJLPS and GadC for glutamate and GltJLP, DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate K10002 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005077 316.0
SYD3_k127_5597850_9 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 317.0
SYD3_k127_5600147_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 327.0
SYD3_k127_5601719_0 Hydantoinase/oxoprolinase N-terminal region K01473 - 3.5.2.14 7.723e-269 844.0
SYD3_k127_5601719_1 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00244 - 1.3.5.4 9.858e-204 645.0
SYD3_k127_5601719_2 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 454.0
SYD3_k127_5601719_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 424.0
SYD3_k127_5601719_4 NAD-dependent epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003242 302.0
SYD3_k127_5601719_5 Catalyzes the conversion of maleate to fumarate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006846 269.0
SYD3_k127_5601719_6 - - - - 0.0000000000000000000000000000000000000000001087 176.0
SYD3_k127_5607554_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 483.0
SYD3_k127_5607554_1 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000003429 92.0
SYD3_k127_5612484_0 - Amino acid transport and metabolism K01953 - 6.3.5.4 1.245e-229 726.0
SYD3_k127_5612484_1 Heparinase II/III N-terminus - - - 3.856e-197 638.0
SYD3_k127_5612484_10 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009058 302.0
SYD3_k127_5612484_11 Polysaccharide biosynthesis/export protein K01991 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009049 257.0
SYD3_k127_5612484_12 Fibronectin type III domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000004375 263.0
SYD3_k127_5612484_13 polysaccharide biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000413 219.0
SYD3_k127_5612484_14 FMN binding - - - 0.00000000000000000000000000000000000000000000000000000003812 201.0
SYD3_k127_5612484_15 O-Antigen ligase - - - 0.0000000000000000000000000000000000000000000000005552 193.0
SYD3_k127_5612484_16 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000079 173.0
SYD3_k127_5612484_17 transferase activity, transferring amino-acyl groups - - - 0.00000000000000000000000000000000000002051 156.0
SYD3_k127_5612484_18 isomerase activity - - - 0.00000000000000000008133 98.0
SYD3_k127_5612484_19 PFAM Glycosyl transferases group 1 - - - 0.00000000000000002974 95.0
SYD3_k127_5612484_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 607.0
SYD3_k127_5612484_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 604.0
SYD3_k127_5612484_4 glycosyl transferase group 1 K03208 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008005 578.0
SYD3_k127_5612484_5 asparagine K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 532.0
SYD3_k127_5612484_6 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 463.0
SYD3_k127_5612484_7 Lipopolysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 362.0
SYD3_k127_5612484_8 Chain length determinant protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003119 353.0
SYD3_k127_5612484_9 Pectate lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003826 324.0
SYD3_k127_5621638_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1035.0
SYD3_k127_5621638_1 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005486 557.0
SYD3_k127_5621638_10 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000003682 153.0
SYD3_k127_5621638_11 Copper resistance protein D - - - 0.00000000000000000000000000000000000001537 149.0
SYD3_k127_5621638_12 Methyl-transferase K18912 - 1.14.99.50 0.00000000000000004201 83.0
SYD3_k127_5621638_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000635 501.0
SYD3_k127_5621638_3 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003214 473.0
SYD3_k127_5621638_4 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 420.0
SYD3_k127_5621638_5 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003664 378.0
SYD3_k127_5621638_6 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 336.0
SYD3_k127_5621638_7 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000004501 241.0
SYD3_k127_5621638_8 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000001528 223.0
SYD3_k127_5621638_9 Belongs to the skp family K06142 - - 0.0000000000000000000000000000000000000000000001063 173.0
SYD3_k127_5628874_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 8.99e-289 898.0
SYD3_k127_5628874_1 Sulfite reductase K00381 - 1.8.1.2 9.831e-256 799.0
SYD3_k127_5628874_2 Bacterial regulatory helix-turn-helix protein, lysR family K13634 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004983 424.0
SYD3_k127_5628874_3 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005857 407.0
SYD3_k127_5628874_4 Tetrapyrrole (Corrin/Porphyrin) Methylases K02303 - 2.1.1.107 0.00000000000000000000000000000000000000000000000000000000000000000004974 245.0
SYD3_k127_5628874_5 conserved protein ucp030820 - - - 0.00000000000000000000000000000000000000000000001292 177.0
SYD3_k127_5628874_6 Protein involved in electron carrier activity, oxidoreductase activity, protein disulfide oxidoreductase activity, cell redox homeostasis and glycerol ether metabolic process - - - 0.00000000000000000000000000000000009286 139.0
SYD3_k127_5628874_7 Tat pathway signal sequence domain-containing protein 1 - - - 0.000000003673 57.0
SYD3_k127_5631205_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 7.282e-299 924.0
SYD3_k127_5631205_1 Putative modulator of DNA gyrase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 552.0
SYD3_k127_5631205_10 - - - - 0.00000000001578 70.0
SYD3_k127_5631205_11 PFAM Carboxymuconolactone decarboxylase - - - 0.0000003423 61.0
SYD3_k127_5631205_12 - - - - 0.00001521 52.0
SYD3_k127_5631205_13 hydroperoxide reductase activity - - - 0.000458 48.0
SYD3_k127_5631205_2 Domain of unknown function (DUF4147) K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008033 548.0
SYD3_k127_5631205_3 Putative modulator of DNA gyrase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 429.0
SYD3_k127_5631205_4 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003087 401.0
SYD3_k127_5631205_5 MOSC domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003428 347.0
SYD3_k127_5631205_6 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001416 273.0
SYD3_k127_5631205_7 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.00000000000000000000000000000000000000000000000002482 188.0
SYD3_k127_5631205_8 Protein of unknown function (DUF1282) - - - 0.00000000000000000000000000000000000000001786 162.0
SYD3_k127_5631205_9 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000002986 151.0
SYD3_k127_5632651_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 1.545e-297 937.0
SYD3_k127_5632651_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 479.0
SYD3_k127_5632651_2 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000004377 231.0
SYD3_k127_5647002_0 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 336.0
SYD3_k127_5647002_1 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000557 233.0
SYD3_k127_5647002_2 Alpha/beta hydrolase family K02170 - 3.1.1.85 0.0000000000000000000000000000000000000000000004771 181.0
SYD3_k127_5647002_3 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.0000000000000000000000000000000000000002846 152.0
SYD3_k127_5650440_0 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008596 316.0
SYD3_k127_5650440_1 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01577,K01652,K03852 - 2.2.1.6,2.3.3.15,4.1.1.8 0.0000000000000000000000000000000000000000000000000000005539 199.0
SYD3_k127_5650440_2 decarboxylase K01607 - 4.1.1.44 0.00000000000000000000000000000000000001187 150.0
SYD3_k127_5662850_0 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009247 290.0
SYD3_k127_5662850_1 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000001546 210.0
SYD3_k127_5662850_2 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000181 140.0
SYD3_k127_5662850_3 - - - - 0.00000000000000000000000005882 114.0
SYD3_k127_5663450_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1056.0
SYD3_k127_5663450_1 Domain of unknown function (DUF3459) K01236 - 3.2.1.141 1.195e-268 840.0
SYD3_k127_5663450_10 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000004503 183.0
SYD3_k127_5663450_11 NUDIX domain - - - 0.00000000000000000000000000000000000000000009336 164.0
SYD3_k127_5663450_12 Hsp20/alpha crystallin family - - - 0.00000000000000000000000000000000000004177 147.0
SYD3_k127_5663450_13 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000008707 156.0
SYD3_k127_5663450_14 - - - - 0.00000000000000000000000000000000002806 144.0
SYD3_k127_5663450_15 Protein of unknown function (DUF4254) - - - 0.000000000000000000000000001414 122.0
SYD3_k127_5663450_16 - - - - 0.000000000000000006038 85.0
SYD3_k127_5663450_17 MerR HTH family regulatory protein K18997 - - 0.000000000000001229 81.0
SYD3_k127_5663450_18 ribonuclease BN K07058 - - 0.00000000001597 66.0
SYD3_k127_5663450_2 Alpha-amylase domain K01182,K01187,K05343 - 3.2.1.1,3.2.1.10,3.2.1.20,5.4.99.16 2.837e-254 795.0
SYD3_k127_5663450_20 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 0.0000001691 59.0
SYD3_k127_5663450_3 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K11177 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 572.0
SYD3_k127_5663450_4 PFAM heat shock protein DnaJ domain protein K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 362.0
SYD3_k127_5663450_5 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001125 286.0
SYD3_k127_5663450_6 CO dehydrogenase flavoprotein C-terminal domain K11178 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000002448 269.0
SYD3_k127_5663450_7 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 0.0000000000000000000000000000000000000000000000000000001024 200.0
SYD3_k127_5663450_8 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000000000003548 197.0
SYD3_k127_5663450_9 PFAM 2Fe-2S -binding K03518,K07302,K13483 - 1.2.5.3,1.3.99.16 0.000000000000000000000000000000000000000000000000000002123 197.0
SYD3_k127_5700895_0 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005634 351.0
SYD3_k127_5700895_1 Rubredoxin - - - 0.0000000000000000004273 87.0
SYD3_k127_5700895_2 SnoaL-like polyketide cyclase - - - 0.0000000004214 66.0
SYD3_k127_5704705_0 Tripartite tricarboxylate transporter TctA family - - - 5.559e-213 674.0
SYD3_k127_5704705_1 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 608.0
SYD3_k127_5704705_10 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000287 299.0
SYD3_k127_5704705_11 Succinate dehydrogenase fumarate reductase flavoprotein K00394 - 1.8.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000003172 284.0
SYD3_k127_5704705_12 PFAM Peptidase M22, glycoprotease K14742 - - 0.00000000000000000000000000000000000000000000000000000000000000001149 231.0
SYD3_k127_5704705_13 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000001488 218.0
SYD3_k127_5704705_14 TPM domain - - - 0.00000000000000000000000000000000000000000000000000007007 193.0
SYD3_k127_5704705_15 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789,K14742 - 2.3.1.128 0.00000000000000000000000000000000000000000004625 165.0
SYD3_k127_5704705_16 LigT like Phosphoesterase - - - 0.00000000000000000000000000000000000884 149.0
SYD3_k127_5704705_17 translation initiation inhibitor, yjgF family - - - 0.0000000000000000000000000000001239 128.0
SYD3_k127_5704705_18 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000006665 100.0
SYD3_k127_5704705_19 Tripartite tricarboxylate transporter TctB family - - - 0.000000000000000000003801 107.0
SYD3_k127_5704705_2 acyl-CoA transferases carnitine dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007257 506.0
SYD3_k127_5704705_20 DNA-sulfur modification-associated - - - 0.0000000008402 71.0
SYD3_k127_5704705_3 histidine kinase HAMP region domain protein K07638 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 407.0
SYD3_k127_5704705_4 response regulator K02483,K07659 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004544 367.0
SYD3_k127_5704705_5 PFAM helix-turn-helix- domain containing protein, AraC type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 332.0
SYD3_k127_5704705_6 Belongs to the LDH2 MDH2 oxidoreductase family K16844 - 1.1.1.338 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 331.0
SYD3_k127_5704705_7 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005684 307.0
SYD3_k127_5704705_8 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 304.0
SYD3_k127_5704705_9 TPM domain K06872 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 294.0
SYD3_k127_5715890_0 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007084 286.0
SYD3_k127_5715890_1 SMP-30 Gluconolaconase K14274 - - 0.00000000000000000000000000000000000000000000000000000009386 205.0
SYD3_k127_5715890_2 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.00000000000000000000007678 100.0
SYD3_k127_571936_0 Integral membrane protein TerC family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009495 332.0
SYD3_k127_571936_1 N-terminal half of MaoC dehydratase K09709,K18291 - 4.2.1.153,4.2.1.56 0.000000000000000000000000003725 113.0
SYD3_k127_5732783_0 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 306.0
SYD3_k127_5732783_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015 - 1.1.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000001482 246.0
SYD3_k127_5732783_2 Serine aminopeptidase, S33 K09023 - - 0.000000000000000000000000000000000000000000000000000000000000000000000956 245.0
SYD3_k127_5732783_3 Asp Glu Hydantoin racemase family protein - - - 0.00000000000000000004326 93.0
SYD3_k127_5732783_4 Cytochrome c - - - 0.0002211 51.0
SYD3_k127_5735562_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 5.612e-267 834.0
SYD3_k127_5735562_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000008887 208.0
SYD3_k127_5735562_2 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000009408 184.0
SYD3_k127_5735562_3 Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000003515 107.0
SYD3_k127_5735562_4 ABC transporter substrate binding protein K01989 - - 0.00000000001584 69.0
SYD3_k127_5760797_0 GcpE protein K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 567.0
SYD3_k127_5760797_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 314.0
SYD3_k127_5760797_2 Type IV pilus biogenesis stability protein PilW K02656 - - 0.000000000000000000000000000000000000000000000000000000000000000007892 241.0
SYD3_k127_5760797_3 Transcriptional regulator K15539 - - 0.00000000000000000000000000000000000000003358 163.0
SYD3_k127_5787069_0 CoA-transferase family III K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000184 263.0
SYD3_k127_5787069_1 Protein of unknown function (DUF3096) - - - 0.0000000002005 63.0
SYD3_k127_5811940_0 Amidohydrolase family K06015 - 3.5.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003312 366.0
SYD3_k127_5820108_0 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007579 288.0
SYD3_k127_5820108_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001436 268.0
SYD3_k127_5820108_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000611 251.0
SYD3_k127_5856578_0 LysR substrate binding domain K03566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 409.0
SYD3_k127_5856578_1 Peptidase M48 Ste24p - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006267 350.0
SYD3_k127_5856578_10 K( ) H( ) antiporter that extrudes potassium in exchange for external protons and maintains the internal concentration of potassium under toxic levels K11105 GO:0003674,GO:0005215,GO:0005451,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006884,GO:0008150,GO:0008324,GO:0008361,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015079,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015386,GO:0015491,GO:0015672,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022804,GO:0022821,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0065007,GO:0065008,GO:0071804,GO:0071805,GO:0071840,GO:0071944,GO:0090066,GO:0098655,GO:0098660,GO:0098662,GO:0099516,GO:1902600 - 0.00001511 54.0
SYD3_k127_5856578_2 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000017 273.0
SYD3_k127_5856578_3 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000009133 235.0
SYD3_k127_5856578_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000001172 221.0
SYD3_k127_5856578_5 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000558 179.0
SYD3_k127_5856578_6 - - - - 0.0000000000000000000000000000000000000000824 158.0
SYD3_k127_5856578_7 PFAM Peptidase M23 - - - 0.00000000000000000000000000000000323 131.0
SYD3_k127_5856578_8 Domain of unknown function (DUF296) K06934 - - 0.0000000000000000000007466 102.0
SYD3_k127_5858389_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 1.128e-195 621.0
SYD3_k127_5858389_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 526.0
SYD3_k127_5858389_2 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 500.0
SYD3_k127_5858389_3 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003977 471.0
SYD3_k127_5858389_4 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005768 342.0
SYD3_k127_5858389_5 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002196 290.0
SYD3_k127_5858389_6 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001872 252.0
SYD3_k127_5858389_7 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000013 115.0
SYD3_k127_5858389_8 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase K03392 - 4.1.1.45 0.0000000000000007068 82.0
SYD3_k127_5859549_0 Chemotaxis K13924 - 2.1.1.80,3.1.1.61 9.151e-251 797.0
SYD3_k127_5859549_1 Alpha/beta hydrolase family K01055 - 3.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 301.0
SYD3_k127_5859549_2 major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005465 302.0
SYD3_k127_5859549_3 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001349 255.0
SYD3_k127_5859549_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000007417 231.0
SYD3_k127_5859549_5 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000000000000000006952 172.0
SYD3_k127_5859549_6 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.000000000000000000000005554 101.0
SYD3_k127_5859549_7 Histidine kinase-like ATPases - - - 0.0000000000002815 84.0
SYD3_k127_5881687_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005704 576.0
SYD3_k127_5881687_1 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003153 481.0
SYD3_k127_5881687_2 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 376.0
SYD3_k127_5881687_3 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 304.0
SYD3_k127_5881687_4 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002713 278.0
SYD3_k127_5895137_0 HWE histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000006626 225.0
SYD3_k127_6001077_0 Protein of unknown function (DUF4080) - - - 2.116e-195 632.0
SYD3_k127_6001077_1 Uncharacterized protein conserved in bacteria (DUF2237) K09966 - - 0.000000000000000000000000000000000000000000000000000000007667 204.0
SYD3_k127_6001077_2 membrane - - - 0.00000000000000000000000000000000000000000000009315 171.0
SYD3_k127_6001077_3 - - - - 0.000000000000000000000000000000007132 138.0
SYD3_k127_6001077_4 Malonyl-CoA decarboxylase K01578 - 4.1.1.9 0.0000000000000000000000000000001436 126.0
SYD3_k127_6001077_5 - - - - 0.00000000000000000000000000007318 118.0
SYD3_k127_6001077_6 protein conserved in bacteria - - - 0.0000000000000000000000001772 114.0
SYD3_k127_6027878_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 1.449e-295 936.0
SYD3_k127_6027878_1 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 2.407e-208 662.0
SYD3_k127_6027878_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005234 315.0
SYD3_k127_6027878_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006448 265.0
SYD3_k127_6028974_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 489.0
SYD3_k127_6028974_1 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 477.0
SYD3_k127_6028974_2 Extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 437.0
SYD3_k127_6028974_3 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 432.0
SYD3_k127_6029202_0 BlaR1 peptidase M56 - - - 0.000000000000000000000000000000000000000001747 172.0
SYD3_k127_6029202_1 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000048 103.0
SYD3_k127_6032758_1 Transposase K07486 - - 0.000000000000000000000009114 113.0
SYD3_k127_6063788_0 PFAM Radical SAM K11779 - 2.5.1.77 0.0 1147.0
SYD3_k127_6063788_1 Methylaspartate ammonia-lyase C-terminus K04835 - 4.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 518.0
SYD3_k127_6063788_10 UTRA domain K03710 - - 0.000000000000000000000000000000001437 132.0
SYD3_k127_6063788_2 Uncharacterised protein family UPF0052 K11212 - 2.7.8.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008811 424.0
SYD3_k127_6063788_3 Belongs to the UPF0271 (lamB) family K07160 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006136 411.0
SYD3_k127_6063788_4 Allophanate hydrolase K01457 - 3.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 395.0
SYD3_k127_6063788_5 F420-0:Gamma-glutamyl ligase K12234 - 6.3.2.31,6.3.2.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003985 341.0
SYD3_k127_6063788_6 Allophanate hydrolase, subunit 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 313.0
SYD3_k127_6063788_7 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000857 274.0
SYD3_k127_6063788_8 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000003701 256.0
SYD3_k127_6063788_9 Guanylyl transferase CofC like K14941 - 2.7.7.68 0.000000000000000000000000000000000000000000000000000004519 199.0
SYD3_k127_6113571_0 Patched family - - - 0.0 1114.0
SYD3_k127_6113571_1 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 3.083e-209 656.0
SYD3_k127_6113571_2 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 293.0
SYD3_k127_6113571_3 Biotin-lipoyl like K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003711 283.0
SYD3_k127_6113571_4 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002164 262.0
SYD3_k127_6113571_6 - - - - 0.000000002574 58.0
SYD3_k127_615014_0 AzlC protein - - - 0.0000000000000000000000000000000000000000000001202 178.0
SYD3_k127_615014_1 Branched-chain amino acid transport protein (AzlD) - - - 0.000000000000000000000001469 108.0
SYD3_k127_615014_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000134 59.0
SYD3_k127_6154589_0 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 457.0
SYD3_k127_6154589_1 D-Ala-D-Ala carboxypeptidase K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001412 273.0
SYD3_k127_6159939_0 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 483.0
SYD3_k127_6159939_1 PFAM fumarylacetoacetate (FAA) hydrolase K16856,K18336 - 4.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006847 292.0
SYD3_k127_6161103_0 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 455.0
SYD3_k127_6161103_1 Protein of unknown function (DUF3025) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000266 252.0
SYD3_k127_6161103_2 Prolyl oligopeptidase family K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000001058 231.0
SYD3_k127_6161103_3 diguanylate cyclase - - - 0.00000000000000000000000000000949 122.0
SYD3_k127_6172852_0 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 284.0
SYD3_k127_6172852_1 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001232 266.0
SYD3_k127_6172852_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000000000009271 192.0
SYD3_k127_6172852_3 Cysteine-rich domain - - - 0.00000000000000000000000000000003739 130.0
SYD3_k127_6176363_0 Belongs to the UbiD family K03182,K16874 - 4.1.1.98 9.728e-255 800.0
SYD3_k127_6176363_1 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit - - - 7.283e-237 742.0
SYD3_k127_6176363_2 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 527.0
SYD3_k127_6176363_3 Coenzyme A transferase K01039 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 492.0
SYD3_k127_6176363_4 Coenzyme A transferase K01040 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005141 413.0
SYD3_k127_6176363_5 Catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway K12960 - 3.5.4.28,3.5.4.31 0.0000000000000000000000000000000000000000000000000000000000000000000000006338 249.0
SYD3_k127_6176363_6 membrane transporter protein K07090 - - 0.0000000000000000000000000000000004682 139.0
SYD3_k127_6205385_0 COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM CutM homologs K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 317.0
SYD3_k127_6205385_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000001384 234.0
SYD3_k127_6208408_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD K03581 - 3.1.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 495.0
SYD3_k127_6208408_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582 GO:0000166,GO:0000724,GO:0000725,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008854,GO:0009314,GO:0009338,GO:0009628,GO:0009987,GO:0015616,GO:0016043,GO:0016462,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017076,GO:0017111,GO:0030554,GO:0032392,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044355,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0099046,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1902494 3.1.11.5 0.000000000000000000000000000000000000000000000000000000000000000000005072 246.0
SYD3_k127_6208408_2 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.0000000001587 63.0
SYD3_k127_6211616_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001355 275.0
SYD3_k127_6211616_1 Glutathione S-Transferase K00799,K11209 - 2.5.1.18 0.000002832 49.0
SYD3_k127_6240053_0 Winged helix-turn helix - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 488.0
SYD3_k127_624020_0 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 5.318e-220 687.0
SYD3_k127_624020_1 formate hydrogenlyase subunit 3 multisubunit Na H antiporter, MnhD subunit K05568,K12137 - - 1.747e-214 679.0
SYD3_k127_624020_2 Proton-conducting membrane transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000763 514.0
SYD3_k127_624020_3 ECF sigma factor K03088 - - 0.0000000000000000000000000000000001477 140.0
SYD3_k127_624020_4 Anti-sigma factor K07167 - - 0.00000000000000000296 94.0
SYD3_k127_624020_5 - - - - 0.0000000000000001142 83.0
SYD3_k127_6268510_0 membrane-associated metal-dependent hydrolase K03760,K19353 - 2.7.8.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 526.0
SYD3_k127_6268510_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009214 434.0
SYD3_k127_6268510_2 PAP2 (Acid phosphatase) superfamily protein - - - 0.00000000000000000000000000000000000000002689 161.0
SYD3_k127_6268510_3 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.0000000000000000000000000000000000001678 145.0
SYD3_k127_6268510_4 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000005811 79.0
SYD3_k127_6268510_5 Transcriptional regulator - - - 0.0000958 51.0
SYD3_k127_6293378_0 Adenylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 565.0
SYD3_k127_6293378_1 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000575 462.0
SYD3_k127_6293378_2 carboxylic ester hydrolase activity K15357 - 3.5.1.106 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 366.0
SYD3_k127_6293378_3 Berberine and berberine like - - - 0.0000000000000000000000000000000000000000000000000000000172 215.0
SYD3_k127_6293378_4 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.000000000000000000000000001928 117.0
SYD3_k127_6293378_5 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000001778 110.0
SYD3_k127_6293378_6 LTXXQ motif family protein - - - 0.00001466 55.0
SYD3_k127_6342760_0 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 1.033e-228 721.0
SYD3_k127_634657_0 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 303.0
SYD3_k127_634657_1 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS - - - 0.00000000000000000000000000000000000000000003786 166.0
SYD3_k127_634657_2 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.0000000000000000000000000000000003336 143.0
SYD3_k127_634657_3 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid K00020 - 1.1.1.31 0.00000000003861 64.0
SYD3_k127_6350609_0 PrpF protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005402 451.0
SYD3_k127_6350609_1 Dehydrogenase K00101 - 1.1.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006222 354.0
SYD3_k127_6350609_2 FAD binding domain K13796 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 321.0
SYD3_k127_6350609_3 MmgE PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006368 294.0
SYD3_k127_6350609_4 major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000001211 232.0
SYD3_k127_6350609_5 Major Facilitator Superfamily - - - 0.00000006963 55.0
SYD3_k127_635278_0 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005474 311.0
SYD3_k127_635278_1 FMN-dependent dehydrogenase K00101,K15054 - 1.1.2.3,1.1.99.31 0.0000000000000000000000000000000000000000000000000000000000000008704 222.0
SYD3_k127_635278_2 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000003546 186.0
SYD3_k127_635884_0 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K05685 - - 2.737e-276 865.0
SYD3_k127_635884_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 432.0
SYD3_k127_635884_2 Histidine kinase K07642 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 344.0
SYD3_k127_635884_3 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07664 - - 0.0000000000000000000000000000000000000000000000000000000003706 209.0
SYD3_k127_635884_4 Outer membrane efflux protein - - - 0.000000000000000000001853 98.0
SYD3_k127_6363961_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007755 327.0
SYD3_k127_6392721_0 Putative metal-binding domain of cation transport ATPase K01533 - 3.6.3.4 2.45e-234 751.0
SYD3_k127_6392721_1 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 326.0
SYD3_k127_6392721_2 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.000000000000000000000000000000000000000001632 158.0
SYD3_k127_6392721_3 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000006535 129.0
SYD3_k127_6392721_4 cytochrome oxidase maturation protein cbb3-type - - - 0.00000000000000006007 81.0
SYD3_k127_6392721_5 Major Facilitator Superfamily K02575 - - 0.0006651 43.0
SYD3_k127_6395945_0 abc transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009948 390.0
SYD3_k127_6395945_1 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003817 259.0
SYD3_k127_6395945_2 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000001753 213.0
SYD3_k127_6395945_3 MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000003212 202.0
SYD3_k127_6395945_4 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000000000000538 177.0
SYD3_k127_6395945_5 D-alanyl-D-alanine carboxypeptidase - - - 0.0000000000000000000000000000000000001441 144.0
SYD3_k127_6395945_6 cellular response to phosphate starvation - - - 0.0000000000000000000000000000003922 127.0
SYD3_k127_6395945_7 Phospholipase_D-nuclease N-terminal - - - 0.00000000000000000000594 95.0
SYD3_k127_6523454_0 Phosphate transporter family K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004925 528.0
SYD3_k127_6523454_1 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016043,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0022607,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901135,GO:1901576 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007443 415.0
SYD3_k127_6523454_10 TPM domain - - - 0.00004313 48.0
SYD3_k127_6523454_2 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 398.0
SYD3_k127_6523454_3 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 301.0
SYD3_k127_6523454_4 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000004771 265.0
SYD3_k127_6523454_5 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000003529 257.0
SYD3_k127_6523454_6 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000259 241.0
SYD3_k127_6523454_7 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000001469 208.0
SYD3_k127_6523454_8 SWI complex, BAF60b domains - - - 0.000000000000000000000000000000002786 130.0
SYD3_k127_6523454_9 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000002852 120.0
SYD3_k127_652970_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006536 297.0
SYD3_k127_652970_1 Tripartite tricarboxylate transporter family receptor K07795 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004791 265.0
SYD3_k127_652970_2 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000008238 128.0
SYD3_k127_652970_3 - - - - 0.00000000003605 67.0
SYD3_k127_652970_4 - - - - 0.0000001203 61.0
SYD3_k127_6540334_0 FAD linked oxidases, C-terminal domain K00102 - 1.1.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006386 612.0
SYD3_k127_6540334_1 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.000000000000000000000000000000000000000000000000000000006668 215.0
SYD3_k127_6540334_2 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.00000000000000000000000000000000000000000000003288 171.0
SYD3_k127_6540334_3 Phosphoglucose isomerase K01810 - 5.3.1.9 0.000000000000000000001137 96.0
SYD3_k127_6540334_4 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000002056 84.0
SYD3_k127_6551723_0 PFAM transposase IS66 K07484 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 610.0
SYD3_k127_6551723_1 IS66 Orf2 like protein - - - 0.0000000000000000000000000000000000000000000000000001286 193.0
SYD3_k127_6551723_2 TIGRFAM YD repeat protein - - - 0.0000000108 56.0
SYD3_k127_6551723_3 Transposase K07483 - - 0.00000002131 61.0
SYD3_k127_6563626_0 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000094 418.0
SYD3_k127_6563626_1 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 391.0
SYD3_k127_6563626_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 395.0
SYD3_k127_6563626_3 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 309.0
SYD3_k127_6563626_4 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.00000000000000000000000000000000000000000000000000002395 193.0
SYD3_k127_6563626_5 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000000003331 185.0
SYD3_k127_6563626_6 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000000000000001433 149.0
SYD3_k127_6563626_7 ATP synthase I chain K02116 - - 0.0000000000000002294 84.0
SYD3_k127_6655581_0 PhoD-like phosphatase K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 530.0
SYD3_k127_6655581_1 Malonyl-CoA decarboxylase N-terminal domain K01578 - 4.1.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 368.0
SYD3_k127_6655581_2 Domain of unknown function (DUF2520) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007035 261.0
SYD3_k127_6655581_3 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01856,K01860,K19802 - 5.1.1.20,5.5.1.1,5.5.1.7 0.00000000000000000000000000000000000000000000000000000001219 208.0
SYD3_k127_6657857_0 FAD linked oxidases, C-terminal domain K00102,K00104,K03777 - 1.1.2.4,1.1.3.15,1.1.5.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 569.0
SYD3_k127_6657857_1 FAD linked oxidase K00104,K11472 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 429.0
SYD3_k127_667237_0 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003663 270.0
SYD3_k127_667237_1 Domain of unknown function (DUF1989) K09967 - - 0.00000000000000000000000000000000000000000000000000001396 195.0
SYD3_k127_667237_2 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000004294 161.0
SYD3_k127_667237_3 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000001208 171.0
SYD3_k127_667237_4 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000003984 128.0
SYD3_k127_667237_5 PFAM conserved - - - 0.00000000000000000000004415 100.0
SYD3_k127_667237_6 - - - - 0.00000004149 62.0
SYD3_k127_6717451_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 3.324e-309 971.0
SYD3_k127_6717451_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000001418 56.0
SYD3_k127_6735642_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 2.061e-216 680.0
SYD3_k127_6735642_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 1.762e-214 674.0
SYD3_k127_6735642_2 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 534.0
SYD3_k127_6735642_3 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751 463.0
SYD3_k127_6735642_4 Cell wall formation K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 422.0
SYD3_k127_6735642_5 cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 368.0
SYD3_k127_6735642_6 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006562 259.0
SYD3_k127_6735642_7 POTRA domain, FtsQ-type - - - 0.0000000000000000000000000000000000000000000000000003609 194.0
SYD3_k127_6808273_0 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 395.0
SYD3_k127_6808273_1 Amidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009315 379.0
SYD3_k127_6808273_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 314.0
SYD3_k127_6808273_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007781 303.0
SYD3_k127_6808273_4 Asparaginase K01424,K05597 - 3.5.1.1,3.5.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003997 286.0
SYD3_k127_6808273_5 Tripartite tricarboxylate transporter family receptor K07795 - - 0.000000000000000000000000000000000000000003018 161.0
SYD3_k127_6809080_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1005.0
SYD3_k127_6809080_1 Histidine kinase - - - 7.308e-255 809.0
SYD3_k127_6809080_2 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 536.0
SYD3_k127_6809080_3 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 477.0
SYD3_k127_6809080_4 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004188 329.0
SYD3_k127_6809080_5 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000007044 231.0
SYD3_k127_6809080_6 Domain of unknown function (DUF4390) - - - 0.0000000000000000000000000000000000000000000000001079 184.0
SYD3_k127_6809080_7 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K00134 GO:0000166,GO:0000226,GO:0001817,GO:0001819,GO:0001906,GO:0001907,GO:0002376,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0004365,GO:0004857,GO:0004866,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005811,GO:0005829,GO:0005856,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006417,GO:0006464,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007010,GO:0007017,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009435,GO:0009605,GO:0009607,GO:0009620,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009987,GO:0010033,GO:0010466,GO:0010468,GO:0010506,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010941,GO:0010942,GO:0010951,GO:0012501,GO:0012505,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016241,GO:0016310,GO:0016491,GO:0016620,GO:0016740,GO:0016769,GO:0016903,GO:0017014,GO:0017144,GO:0017148,GO:0018119,GO:0018130,GO:0018193,GO:0018198,GO:0019222,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019730,GO:0019752,GO:0019828,GO:0019904,GO:0030162,GO:0030234,GO:0030414,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031341,GO:0031343,GO:0031640,GO:0031647,GO:0031965,GO:0031967,GO:0031975,GO:0032268,GO:0032269,GO:0032787,GO:0032879,GO:0032880,GO:0032991,GO:0034097,GO:0034248,GO:0034249,GO:0034341,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035605,GO:0035606,GO:0035821,GO:0036094,GO:0036211,GO:0042221,GO:0042802,GO:0042866,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043436,GO:0043891,GO:0043900,GO:0043902,GO:0043903,GO:0044003,GO:0044004,GO:0044068,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044364,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044531,GO:0044532,GO:0044533,GO:0045087,GO:0045861,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050662,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050832,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051287,GO:0051336,GO:0051346,GO:0051402,GO:0051701,GO:0051702,GO:0051704,GO:0051707,GO:0051709,GO:0051712,GO:0051716,GO:0051817,GO:0051818,GO:0051851,GO:0051852,GO:0051873,GO:0051883,GO:0052040,GO:0052042,GO:0052248,GO:0052330,GO:0052433,GO:0052501,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060255,GO:0061134,GO:0061135,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0061844,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070887,GO:0070997,GO:0071310,GO:0071345,GO:0071346,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090087,GO:0090407,GO:0097159,GO:0097452,GO:0097718,GO:0098542,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903530,GO:1903532,GO:1904951,GO:1990904,GO:2000112,GO:2000113 1.2.1.12 0.00000000000000000000001832 100.0
SYD3_k127_6814569_0 GXGXG motif K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.0 2336.0
SYD3_k127_6814569_1 Penicillin-binding Protein K05366 - 2.4.1.129,3.4.16.4 0.0 1036.0
SYD3_k127_6814569_10 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000000000000000000000000001296 229.0
SYD3_k127_6814569_11 Fimbrial assembly protein (PilN) K02663 - - 0.000000000000000000000000000000000000000000000000000000002198 208.0
SYD3_k127_6814569_12 Pilus assembly protein, PilP K02665 - - 0.00000000000000000000000000000000000000000000000001019 186.0
SYD3_k127_6814569_13 - - - - 0.000000004871 61.0
SYD3_k127_6814569_2 type IV pilus secretin PilQ K02666 - - 2.693e-255 805.0
SYD3_k127_6814569_3 glutamate synthase K00266 - 1.4.1.13,1.4.1.14 4.19e-247 770.0
SYD3_k127_6814569_4 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003095 578.0
SYD3_k127_6814569_5 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002787 550.0
SYD3_k127_6814569_6 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003962 522.0
SYD3_k127_6814569_7 Type IV pilus assembly protein PilM K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003732 503.0
SYD3_k127_6814569_8 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 480.0
SYD3_k127_6814569_9 Pilus assembly protein, PilO K02664 - - 0.00000000000000000000000000000000000000000000000000000000000000000001017 243.0
SYD3_k127_6820304_0 Tripartite tricarboxylate transporter TctA family K07793 - - 3.603e-259 805.0
SYD3_k127_6820304_1 Belongs to the TPP enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 505.0
SYD3_k127_6820304_2 Tripartite tricarboxylate transporter TctB family K07794 - - 0.0000000000000000000000000000000000000000003343 162.0
SYD3_k127_6822555_0 PFAM transglutaminase domain protein K22452 - 2.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003604 592.0
SYD3_k127_6822555_1 PFAM histone deacetylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 423.0
SYD3_k127_6822555_2 PFAM ATPase associated with various cellular activities, AAA_3 K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 412.0
SYD3_k127_6822555_3 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005037 453.0
SYD3_k127_6822555_4 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 384.0
SYD3_k127_6822555_5 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005867 312.0
SYD3_k127_6822555_6 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 297.0
SYD3_k127_6822555_7 COG0739 Membrane proteins related to metalloendopeptidases K06194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004729 262.0
SYD3_k127_6822555_8 CoA-binding domain protein K09181 - - 0.0000000000000000000000000000000000000000000000000000005183 199.0
SYD3_k127_6822555_9 Carbon-nitrogen hydrolase K11206 - - 0.00000000000000000000000000575 111.0
SYD3_k127_6828479_0 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000484 520.0
SYD3_k127_6828479_1 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides K07232 - - 0.000000000000000000000000000000000000000000000000000002605 200.0
SYD3_k127_6828479_2 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000001415 165.0
SYD3_k127_6828479_3 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000629 130.0
SYD3_k127_6828479_4 glutathione transferase activity K00799 - 2.5.1.18 0.000000000000000000000000000009507 126.0
SYD3_k127_6828479_5 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000001219 111.0
SYD3_k127_6828479_6 ubiE/COQ5 methyltransferase family - - - 0.000000000000000003439 84.0
SYD3_k127_6828479_7 Dodecin K09165 - - 0.00000000000000001507 94.0
SYD3_k127_6842915_0 BON domain - - - 0.00000000000000000008144 92.0
SYD3_k127_6842915_1 proteasome regulatory particle assembly K15503,K15504 - - 0.00000144 57.0
SYD3_k127_6842915_2 DNA-damage-repair toleration protein - GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0050896 - 0.00003683 53.0
SYD3_k127_6849951_0 OpgC protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 376.0
SYD3_k127_6849951_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001864 256.0
SYD3_k127_6849951_10 - - - - 0.00000000002847 69.0
SYD3_k127_6849951_11 Cupin 2, conserved barrel domain protein K01810 - 5.3.1.9 0.0000007328 61.0
SYD3_k127_6849951_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001521 251.0
SYD3_k127_6849951_3 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001551 243.0
SYD3_k127_6849951_4 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000007939 240.0
SYD3_k127_6849951_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000008088 226.0
SYD3_k127_6849951_6 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000000000000000000000000000006749 210.0
SYD3_k127_6849951_7 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346,K03502 GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0042276,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1990904 2.7.7.7 0.0000000000000000000000000000000000000000000002299 171.0
SYD3_k127_6849951_8 Oxidoreductase - - - 0.000000000000000000000000000000000000000000001985 177.0
SYD3_k127_6849951_9 Cupin - - - 0.000000000009932 76.0
SYD3_k127_6852576_0 dehydrogenase, E1 component K00164 - 1.2.4.2 0.0 1293.0
SYD3_k127_6852576_1 PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A K01908 - 6.2.1.17 4e-323 997.0
SYD3_k127_6852576_10 Cytochrome c K17223 - - 0.0000000000000000000000000000000000000102 152.0
SYD3_k127_6852576_11 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.00000000000000000000000000000005789 127.0
SYD3_k127_6852576_2 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 5.968e-265 827.0
SYD3_k127_6852576_3 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 7.967e-234 730.0
SYD3_k127_6852576_4 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 560.0
SYD3_k127_6852576_5 PFAM Alcohol dehydrogenase GroES domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006741 421.0
SYD3_k127_6852576_6 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003074 392.0
SYD3_k127_6852576_7 PFAM AFG1-family ATPase K06916 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002903 372.0
SYD3_k127_6852576_8 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007867 295.0
SYD3_k127_6852576_9 Protein of unknown function (DUF423) - - - 0.00000000000000000000000000000000000000006405 154.0
SYD3_k127_6853408_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 6.912e-210 665.0
SYD3_k127_6853408_1 Phosphoribosyl transferase domain K07100 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002472 261.0
SYD3_k127_6853408_2 dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001844 254.0
SYD3_k127_6853408_3 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000001686 214.0
SYD3_k127_6853408_4 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.0000000000000000000000000000000004522 135.0
SYD3_k127_6861442_0 protein related to plant photosystem II stability assembly factor - - - 4.3e-213 665.0
SYD3_k127_6861442_1 - - - - 0.00000000000000000000000000000000000000000000000000000000004142 219.0
SYD3_k127_6861442_2 PFAM aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.0000000000000000000000000000000002169 132.0
SYD3_k127_6861442_3 ThiS family K03636 - - 0.000000000000000000000000000000726 125.0
SYD3_k127_6863543_0 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004261 279.0
SYD3_k127_6863543_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000006783 216.0
SYD3_k127_6863543_2 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000003896 110.0
SYD3_k127_6866747_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008316 604.0
SYD3_k127_6866747_1 Ketopantoate reductase PanE/ApbA C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 415.0
SYD3_k127_6866747_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate - - - 0.0000000000000000000000000000000000000000000000000000000001183 210.0
SYD3_k127_6870872_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 1.789e-199 626.0
SYD3_k127_6872352_0 Bacterial transcriptional activator domain - - - 3.297e-211 694.0
SYD3_k127_6872352_1 Domain of unknown function (DUF1974) K06445 - - 0.000000000000000000000000000007449 123.0
SYD3_k127_6872352_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000002153 81.0
SYD3_k127_6872674_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1105.0
SYD3_k127_6872674_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 7.256e-278 870.0
SYD3_k127_6872674_10 DNA polymerase III is a complex multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3 to 5 exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002225 276.0
SYD3_k127_6872674_11 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001085 269.0
SYD3_k127_6872674_12 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001207 267.0
SYD3_k127_6872674_13 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000000000000001699 223.0
SYD3_k127_6872674_14 phosphoribosyltransferase K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000008272 222.0
SYD3_k127_6872674_15 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000000000000000000008961 175.0
SYD3_k127_6872674_2 PFAM aminotransferase, class I K14267 - 2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000082 548.0
SYD3_k127_6872674_3 PFAM Type II secretion system protein E K02670 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002567 460.0
SYD3_k127_6872674_4 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002737 430.0
SYD3_k127_6872674_5 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 407.0
SYD3_k127_6872674_6 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 333.0
SYD3_k127_6872674_7 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006198 326.0
SYD3_k127_6872674_8 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005873 328.0
SYD3_k127_6872674_9 Phosphorylase superfamily K00772,K03815 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004065 312.0
SYD3_k127_6873029_0 MmgE/PrpD family K01720 - 4.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 364.0
SYD3_k127_6880608_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 2.186e-265 829.0
SYD3_k127_6880608_1 Neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006786 431.0
SYD3_k127_6880608_2 Transcriptional regulatory protein, C terminal K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 317.0
SYD3_k127_6880608_3 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002429 284.0
SYD3_k127_6880608_4 Domain of unknown function (DUF4126) - - - 0.00000000000000000000000000000000000000000000000000000000000002136 221.0
SYD3_k127_6880608_5 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000002833 199.0
SYD3_k127_6880608_6 proline dipeptidase activity K01262 - 3.4.11.9 0.0000000000000000000000000000000000000004559 164.0
SYD3_k127_6880608_7 Transglycosylase associated protein - - - 0.00000000000000000000000000007657 118.0
SYD3_k127_6880608_8 - - - - 0.00000000000005626 76.0
SYD3_k127_6880608_9 helix_turn_helix, Lux Regulon - - - 0.00000003386 61.0
SYD3_k127_6887103_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 345.0
SYD3_k127_6887103_1 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004652 345.0
SYD3_k127_6887103_10 OmpA-like transmembrane domain - - - 0.00000000000000000000000000000000122 140.0
SYD3_k127_6887103_11 diguanylate cyclase - - - 0.000000000000000000000000000000002506 149.0
SYD3_k127_6887103_12 Pfam Response regulator receiver - - - 0.000000000000000004375 91.0
SYD3_k127_6887103_13 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 0.00000000000000005013 81.0
SYD3_k127_6887103_14 Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b) K07337 - - 0.000000000000001369 86.0
SYD3_k127_6887103_15 Protein of unknown function (DUF2934) - - - 0.0000008417 56.0
SYD3_k127_6887103_16 Response regulator receiver K02482 - 2.7.13.3 0.00004589 53.0
SYD3_k127_6887103_2 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 339.0
SYD3_k127_6887103_3 Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 314.0
SYD3_k127_6887103_4 cyclic nucleotide binding K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007488 267.0
SYD3_k127_6887103_5 Bacterial regulatory proteins, luxR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007573 257.0
SYD3_k127_6887103_6 Transcriptional regulator crp fnr family K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001408 248.0
SYD3_k127_6887103_7 Uncharacterized protein family UPF0016 - - - 0.00000000000000000000000000000000000000000000000000000000000003022 219.0
SYD3_k127_6887103_8 ribosomal large subunit export from nucleus - - - 0.000000000000000000000000000000000000000000000000000000000002647 212.0
SYD3_k127_6887103_9 Universal stress protein - - - 0.000000000000000000000000000000000003396 142.0
SYD3_k127_6914653_0 Protein of unknown function - - - 0.0 1150.0
SYD3_k127_6914653_1 modulator of DNA gyrase K03568 - - 1.261e-248 774.0
SYD3_k127_6914653_10 Domain of unknown function (DUF1841) - - - 0.00000000000000000000000000000000000000000000000000000009569 198.0
SYD3_k127_6914653_11 Part of a membrane complex involved in electron transport K03616 - - 0.0000000000000000000000000000000000000000000000000006351 197.0
SYD3_k127_6914653_12 Dihydroorotate dehydrogenase K00254 - 1.3.5.2 0.0000000000000000000000000000000000008594 141.0
SYD3_k127_6914653_13 Cytochrome c - - - 0.0000000000000000000000000000000002966 137.0
SYD3_k127_6914653_14 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000005286 134.0
SYD3_k127_6914653_15 Cytochrome c - - - 0.000000000000000000000000001198 117.0
SYD3_k127_6914653_16 - - - - 0.0000000008987 62.0
SYD3_k127_6914653_2 STAS domain K03321 - - 3.526e-219 695.0
SYD3_k127_6914653_3 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008381 539.0
SYD3_k127_6914653_4 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005959 426.0
SYD3_k127_6914653_5 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 428.0
SYD3_k127_6914653_6 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 411.0
SYD3_k127_6914653_7 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 328.0
SYD3_k127_6914653_8 Pfam Periplasmic binding protein K02016,K06858 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000191 265.0
SYD3_k127_6914653_9 Adenosyltransferase K00798 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005525,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016043,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019003,GO:0019438,GO:0019538,GO:0022607,GO:0030091,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033013,GO:0033014,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000002155 231.0
SYD3_k127_6924656_0 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003916 340.0
SYD3_k127_6924656_1 Histidine kinase K05962 - 2.7.13.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009195 280.0
SYD3_k127_6924656_2 - K09004 - - 0.000000000000000000000000006128 121.0
SYD3_k127_6924656_3 Met-10+ like-protein - - - 0.000000000000003498 79.0
SYD3_k127_6924656_4 - - - - 0.000000002258 64.0
SYD3_k127_6928019_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1012.0
SYD3_k127_6928019_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 2.817e-273 861.0
SYD3_k127_6928019_2 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 490.0
SYD3_k127_6928019_3 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001386 261.0
SYD3_k127_6928019_4 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000000000000000000001814 190.0
SYD3_k127_6928019_5 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000000000000000000000000001463 182.0
SYD3_k127_6928019_6 PFAM regulatory protein, MerR - - - 0.0000000000000000000000000000000000000000000001068 171.0
SYD3_k127_6928019_7 Domain of unknown function (DUF1330) - - - 0.0000000000000000000000000176 110.0
SYD3_k127_6928019_8 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000000008713 87.0
SYD3_k127_6931368_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.994e-280 872.0
SYD3_k127_6931368_1 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007573 455.0
SYD3_k127_6931368_2 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000361 268.0
SYD3_k127_6933070_0 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006453 378.0
SYD3_k127_6933070_1 Peptidase family U32 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005354 377.0
SYD3_k127_6933070_2 myo-inosose-2 dehydratase activity - - - 0.000000000000000227 81.0
SYD3_k127_6939521_0 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 8.495e-245 781.0
SYD3_k127_6939521_1 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 8.587e-204 647.0
SYD3_k127_6939521_10 Cytochrome c - - - 0.0000000003219 67.0
SYD3_k127_6939521_2 Homoserine dehydrogenase, NAD binding domain-containing protein - - - 2.138e-202 639.0
SYD3_k127_6939521_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 373.0
SYD3_k127_6939521_4 (ABC) transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 317.0
SYD3_k127_6939521_5 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003881 317.0
SYD3_k127_6939521_6 D-amino acid dehydrogenase K00285 - 1.4.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000005626 264.0
SYD3_k127_6939521_7 plastoquinol--plastocyanin reductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006139 247.0
SYD3_k127_6939521_8 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.000000000000000000000000000000000000000000000000000000112 210.0
SYD3_k127_6939521_9 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000002822 171.0
SYD3_k127_6946105_0 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.0000000000000000000000000000000000000000000000001288 182.0
SYD3_k127_6946105_1 MAATS-type transcriptional repressor, C-terminal region K03577,K18135 - - 0.000000000000000000000000003765 116.0
SYD3_k127_6954030_0 general L-amino acid-binding periplasmic protein AapJ K09969 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 487.0
SYD3_k127_6954030_1 Putative sugar-binding N-terminal domain K21948 - 2.7.1.217 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 485.0
SYD3_k127_6954030_2 Binding-protein-dependent transport system inner membrane component K09970 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 442.0
SYD3_k127_6954030_3 COG0765 ABC-type amino acid transport system, permease component K09971 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003433 428.0
SYD3_k127_6954030_4 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 301.0
SYD3_k127_6954030_5 Class II Aldolase and Adducin N-terminal domain K22130 - 4.1.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008044 280.0
SYD3_k127_6954030_6 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000195 258.0
SYD3_k127_6954030_7 protein possibly involved in utilization of glycolate and propanediol - - - 0.0000000000000000000000000000000000007974 144.0
SYD3_k127_6960574_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 504.0
SYD3_k127_6960574_1 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000000006558 185.0
SYD3_k127_6961145_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 6.765e-261 815.0
SYD3_k127_6961145_1 response regulator K02483,K07666,K07774 - - 0.00000000000000000000000000000000000000000000000000000000000000000004512 243.0
SYD3_k127_6961145_2 Domain of unknown function (DUF4212) - - - 0.0000000000000000000000000002367 117.0
SYD3_k127_6961145_3 Putative nucleotidyltransferase substrate binding domain K07182 - - 0.0000000000000000007227 89.0
SYD3_k127_6961145_4 - - - - 0.00000000002967 66.0
SYD3_k127_6962788_0 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 558.0
SYD3_k127_6966955_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2419.0
SYD3_k127_6966955_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2319.0
SYD3_k127_6966955_10 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0000000000000000000000000000000007626 133.0
SYD3_k127_6966955_11 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000001028 79.0
SYD3_k127_6966955_12 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0000007037 50.0
SYD3_k127_6966955_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004263 368.0
SYD3_k127_6966955_3 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003241 355.0
SYD3_k127_6966955_4 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 331.0
SYD3_k127_6966955_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001946 261.0
SYD3_k127_6966955_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004569 251.0
SYD3_k127_6966955_7 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001233 242.0
SYD3_k127_6966955_8 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000000005855 226.0
SYD3_k127_6966955_9 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000000000000000000002763 192.0
SYD3_k127_6967605_0 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 510.0
SYD3_k127_6967605_1 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009809 443.0
SYD3_k127_6967605_2 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 336.0
SYD3_k127_6967605_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001606 257.0
SYD3_k127_6967605_4 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K18983 - 5.5.1.27 0.0000000000000000000000000000000000000000000000000000000195 213.0
SYD3_k127_6967605_5 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000000000000006848 154.0
SYD3_k127_6972146_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 456.0
SYD3_k127_6972146_1 PFAM Methylated-DNA- protein -cysteine S-methyltransferase, DNA binding K00567 - 2.1.1.63 0.0000000000000000000000000000000000000000000005522 185.0
SYD3_k127_6977613_0 PFAM ABC-1 domain protein K03688 - - 5.174e-227 716.0
SYD3_k127_6977613_1 - - - - 0.000000000000000000000000000000000001776 147.0
SYD3_k127_6977613_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.0000000008337 59.0
SYD3_k127_6985151_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 1.868e-225 718.0
SYD3_k127_6985151_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02622 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 323.0
SYD3_k127_6985151_2 Transglycosylase associated protein - - - 0.00003046 49.0
SYD3_k127_6985524_0 Fructose-bisphosphate aldolase class-I K01623 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007209 421.0
SYD3_k127_6985524_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000001461 207.0
SYD3_k127_7010446_0 probably involved in intracellular septation K06190 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001916 265.0
SYD3_k127_7010446_1 Peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000002597 157.0
SYD3_k127_7010446_2 BolA-like protein K05527 - - 0.00000000000000000000000003739 116.0
SYD3_k127_7017329_0 PFAM Glycosyl transferase, family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 529.0
SYD3_k127_7017329_1 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000003595 244.0
SYD3_k127_7017374_0 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003565 476.0
SYD3_k127_7017374_1 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 479.0
SYD3_k127_7017374_2 3-5 exonuclease K07501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008663 421.0
SYD3_k127_7017374_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 385.0
SYD3_k127_7017374_4 Phosphomethylpyrimidine kinase K03272,K21344 - 2.7.1.167,2.7.7.70 0.0000000000000000000008921 96.0
SYD3_k127_7024238_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 606.0
SYD3_k127_7024238_1 ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004519 538.0
SYD3_k127_7024238_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006324 520.0
SYD3_k127_7024238_3 Abc transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006586 431.0
SYD3_k127_7024238_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 335.0
SYD3_k127_7024238_5 HlyD family K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007043 326.0
SYD3_k127_7024238_6 major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 316.0
SYD3_k127_7024238_7 protein-L-isoaspartate O-methyltransferase K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000001183 269.0
SYD3_k127_7024238_8 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000007648 194.0
SYD3_k127_7027827_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 317.0
SYD3_k127_7027827_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000005429 136.0
SYD3_k127_7028691_0 aerobic-type carbon monoxide dehydrogenase, large subunit CoxL - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 312.0
SYD3_k127_7028691_1 flavin adenine dinucleotide binding - - - 0.00000000004302 63.0
SYD3_k127_7053175_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1048.0
SYD3_k127_7053175_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004965 330.0
SYD3_k127_7064636_0 His Kinase A (phospho-acceptor) domain - - - 0.0 1134.0
SYD3_k127_7064636_2 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.000000000006002 65.0
SYD3_k127_7068809_0 Acts as a magnesium transporter K06213 - - 1.201e-208 659.0
SYD3_k127_7068809_1 transmembrane transcriptional regulator (Anti-sigma factor) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009511 308.0
SYD3_k127_7068809_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000468 197.0
SYD3_k127_7071471_0 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002336 365.0
SYD3_k127_7071471_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000005404 195.0
SYD3_k127_7071471_2 - - - - 0.000000000000000000000000000000000000021 148.0
SYD3_k127_7071471_3 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000002331 146.0
SYD3_k127_7079360_0 Heat shock 70 kDa protein K04043 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 0.0 1061.0
SYD3_k127_7079360_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 431.0
SYD3_k127_7079360_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000000000000000000000000000000489 225.0
SYD3_k127_7079360_3 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000007659 203.0
SYD3_k127_7082473_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 525.0
SYD3_k127_7087304_0 COG1042 Acyl-CoA synthetase (NDP forming) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003065 262.0
SYD3_k127_7095005_0 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 329.0
SYD3_k127_7095005_1 Aconitase family (aconitate hydratase) K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 308.0
SYD3_k127_7095005_2 metal-dependent enzyme of the double-stranded beta helix superfamily - - - 0.000000000000000000000000000000000000000000000000000000002027 205.0
SYD3_k127_7095005_3 Peptidase M15 - - - 0.00000000000000000000000000156 118.0
SYD3_k127_7095005_4 Cupin domain - - - 0.00000000000000000000000008635 118.0
SYD3_k127_7095005_5 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000004685 106.0
SYD3_k127_7095005_6 Antibiotic biosynthesis monooxygenase - - - 0.00000000003359 67.0
SYD3_k127_7118122_0 GMC oxidoreductase K00108 - 1.1.99.1 1.827e-197 629.0
SYD3_k127_7118122_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 314.0
SYD3_k127_7118122_2 Helix-turn-helix XRE-family like proteins K21498 - - 0.00000000000000000000000000000000000001127 146.0
SYD3_k127_7118122_3 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000004177 147.0
SYD3_k127_7118122_4 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.0000000000000000000000000000000002217 134.0
SYD3_k127_7118122_5 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.0000000000000000000000000001278 116.0
SYD3_k127_7118122_6 BrnA antitoxin of type II toxin-antitoxin system - - - 0.00000000002399 69.0
SYD3_k127_7129315_0 Alanine-glyoxylate amino-transferase K00375,K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004129 584.0
SYD3_k127_7129315_1 Cell wall hydrolase - - - 0.000000000001792 70.0
SYD3_k127_7130848_0 Pfam Sulfatase K01133 - 3.1.6.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000853 605.0
SYD3_k127_7130848_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007371 503.0
SYD3_k127_7130848_10 Transcriptional regulator K13771 - - 0.0000000000000000000009691 96.0
SYD3_k127_7130848_2 regulatory protein TetR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 289.0
SYD3_k127_7130848_3 Formylmethanofuran dehydrogenase, subunit e - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 284.0
SYD3_k127_7130848_4 ferredoxin--nadp reductase K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001578 278.0
SYD3_k127_7130848_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004124 270.0
SYD3_k127_7130848_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009135 247.0
SYD3_k127_7130848_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000004562 221.0
SYD3_k127_7130848_8 LysR substrate binding domain - - - 0.000000000000000000000000000000000002311 150.0
SYD3_k127_7130848_9 Uncharacterized conserved protein (DUF2249) - - - 0.0000000000000000000000000000000003262 139.0
SYD3_k127_7140439_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1427.0
SYD3_k127_7140439_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 5.578e-205 644.0
SYD3_k127_7140439_10 KTSC domain - - - 0.000000000000006484 77.0
SYD3_k127_7140439_11 Protein of unknown function (DUF2442) - - - 0.000001856 54.0
SYD3_k127_7140439_12 Histidine kinase-like ATPases - - - 0.0001242 44.0
SYD3_k127_7140439_2 ATPase histidine kinase DNA gyrase B HSP90 domain protein K02668 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 501.0
SYD3_k127_7140439_3 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 474.0
SYD3_k127_7140439_4 Beta-eliminating lyase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009556 386.0
SYD3_k127_7140439_5 elongation factor G K02355 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 371.0
SYD3_k127_7140439_6 hydrolases of the HAD superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 334.0
SYD3_k127_7140439_7 N-acetylmuramoyl-L-alanine amidase (Family 2) K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043167,GO:0043169,GO:0043170,GO:0046872,GO:0046914,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000003038 259.0
SYD3_k127_7140439_8 Protein of unknown function (DUF2946) - - - 0.000000000000000000000000000000000000000000005904 169.0
SYD3_k127_7140439_9 - K06950 - - 0.00000000000000002915 85.0
SYD3_k127_7145563_0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003326 609.0
SYD3_k127_7145563_1 Receptor family ligand binding region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009442 555.0
SYD3_k127_7145563_10 NMT1/THI5 like - - - 0.0000000000000000000000000000000000000000000000000000000000001582 229.0
SYD3_k127_7145563_11 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.0000000000000000000000000000000001149 145.0
SYD3_k127_7145563_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 468.0
SYD3_k127_7145563_3 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 435.0
SYD3_k127_7145563_4 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 411.0
SYD3_k127_7145563_5 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 376.0
SYD3_k127_7145563_6 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 336.0
SYD3_k127_7145563_7 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004922 316.0
SYD3_k127_7145563_8 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000275 317.0
SYD3_k127_7145563_9 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001436 285.0
SYD3_k127_7157898_0 Amidohydrolase K03392,K22213 - 4.1.1.45,4.1.1.52 0.000000000000000000000000000000000000000000000000000001168 200.0
SYD3_k127_7157898_1 MmgE/PrpD family - - - 0.0000000000000000000000000006347 128.0
SYD3_k127_7177506_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K02021,K11085 - - 5.783e-231 728.0
SYD3_k127_7177506_1 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005071 357.0
SYD3_k127_7177506_2 PFAM glycosyl transferase family 9 K02849 - - 0.00000005197 55.0
SYD3_k127_7181398_0 Protein of unknown function, DUF599 - - - 0.00000000000000000008989 91.0
SYD3_k127_7181398_1 - - - - 0.0003823 50.0
SYD3_k127_7191264_0 COG2801 Transposase and inactivated derivatives K07497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 424.0
SYD3_k127_7191264_1 PFAM transposase IS3 IS911 family protein K07483 - - 0.00000000000000000000000000000009575 127.0
SYD3_k127_7214564_0 Fic/DOC family N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006507 523.0
SYD3_k127_7214564_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 301.0
SYD3_k127_7214564_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000003376 230.0
SYD3_k127_7214564_3 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000001172 181.0
SYD3_k127_7214564_4 Short-chain dehydrogenase reductase SDR K00065 - 1.1.1.127 0.00000000000000000000000000000000000000002996 161.0
SYD3_k127_7214564_5 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.000000000000000000000000000000001167 142.0
SYD3_k127_7214564_6 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000006248 82.0
SYD3_k127_7214564_7 - - - - 0.00000734 56.0
SYD3_k127_7235228_0 cell redox homeostasis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002018 268.0
SYD3_k127_7235228_1 Major Facilitator Superfamily - - - 0.0002973 53.0
SYD3_k127_7245398_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 2.206e-214 686.0
SYD3_k127_7245398_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007212 378.0
SYD3_k127_7245398_2 MraZ protein, putative antitoxin-like K03925 - - 0.00000000000000000000000000000000000000000000159 167.0
SYD3_k127_7245398_3 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.000000000000000000000000002134 118.0
SYD3_k127_7258565_0 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 325.0
SYD3_k127_7258565_1 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 295.0
SYD3_k127_7274471_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 2.008e-270 844.0
SYD3_k127_7274471_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 6.95e-264 816.0
SYD3_k127_7274471_10 Thioredoxin - - - 0.0000000000000000000000000000000000000000000000001138 185.0
SYD3_k127_7274471_11 PFAM Sporulation domain protein - - - 0.000000000000000000000000000000000000000000000009436 178.0
SYD3_k127_7274471_2 Arginyl-tRNA synthetase K01887 - 6.1.1.19 1.389e-247 776.0
SYD3_k127_7274471_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 565.0
SYD3_k127_7274471_4 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009374 561.0
SYD3_k127_7274471_5 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 542.0
SYD3_k127_7274471_6 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004981 449.0
SYD3_k127_7274471_7 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000323 251.0
SYD3_k127_7274471_8 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000000000000000000000000000000000000000000000879 212.0
SYD3_k127_7274471_9 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000000002605 213.0
SYD3_k127_7281524_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758 - 4.2.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 509.0
SYD3_k127_7290233_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1234.0
SYD3_k127_7290233_1 DNA topoisomerase, type IA, central K03169 - 5.99.1.2 0.0 1075.0
SYD3_k127_7290233_10 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.0000000000000005045 78.0
SYD3_k127_7290233_11 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000000008379 74.0
SYD3_k127_7290233_12 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 GO:0000966,GO:0001682,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.00000000007862 68.0
SYD3_k127_7290233_2 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 1.088e-306 951.0
SYD3_k127_7290233_3 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 7.587e-226 712.0
SYD3_k127_7290233_4 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 1.766e-197 625.0
SYD3_k127_7290233_5 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 509.0
SYD3_k127_7290233_6 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 460.0
SYD3_k127_7290233_7 DNA recombination-mediator protein A K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006135 426.0
SYD3_k127_7290233_8 PFAM Peptidoglycan-binding LysM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 328.0
SYD3_k127_7290233_9 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000000000000000000000122 215.0
SYD3_k127_7291936_0 ATPase associated with K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004755 362.0
SYD3_k127_7291936_1 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000009754 221.0
SYD3_k127_7291936_2 oxidoreductase activity - - - 0.00000000000000000000000000000000000000000000000000000000309 218.0
SYD3_k127_7296494_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 1.41e-267 850.0
SYD3_k127_7296494_1 Na dependent nucleoside transporter K03317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003395 523.0
SYD3_k127_7296494_10 phosphoglucosamine mutase activity K00344,K01840,K03431,K15778,K16881 - 1.6.5.5,2.7.7.13,5.4.2.10,5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000001276 231.0
SYD3_k127_7296494_11 Belongs to the mandelate racemase muconate lactonizing enzyme family K20023 - 4.2.1.156,4.2.1.42 0.00000000000000000000000000000000000000000000000000000003783 211.0
SYD3_k127_7296494_2 Mediates influx of magnesium ions K03284,K16074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 458.0
SYD3_k127_7296494_3 Lysin motif K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009586 437.0
SYD3_k127_7296494_4 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 426.0
SYD3_k127_7296494_5 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 325.0
SYD3_k127_7296494_6 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000488 305.0
SYD3_k127_7296494_7 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006152 302.0
SYD3_k127_7296494_8 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005114 291.0
SYD3_k127_7296494_9 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000262 242.0
SYD3_k127_731642_0 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family K03185 - - 0.0000000000000000000000000000000000000000000000000000000000000000001007 235.0
SYD3_k127_731642_1 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000000007702 211.0
SYD3_k127_7335489_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 520.0
SYD3_k127_7335489_1 LUD domain K00782 - - 0.00000000000000000000000000000000000000000000000000000000000209 216.0
SYD3_k127_7340293_0 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009813 437.0
SYD3_k127_7340293_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003416 320.0
SYD3_k127_7340293_2 O-methyltransferase activity - - - 0.00000000004444 65.0
SYD3_k127_7370789_0 Soluble lytic murein transglycosylase L domain K08309 - - 7.035e-198 637.0
SYD3_k127_7370789_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 284.0
SYD3_k127_7397640_0 Cupin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 528.0
SYD3_k127_7397640_1 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 396.0
SYD3_k127_7397640_2 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000058 376.0
SYD3_k127_7397640_3 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005433 348.0
SYD3_k127_7397640_4 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009068 299.0
SYD3_k127_7397640_5 Isocitrate lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009519 296.0
SYD3_k127_7397640_6 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000001594 170.0
SYD3_k127_7403870_0 Proton-conducting membrane transporter K12137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 346.0
SYD3_k127_7403870_1 NADH dehydrogenase - - - 0.00000000000415 70.0
SYD3_k127_7406462_0 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 404.0
SYD3_k127_7406462_1 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 344.0
SYD3_k127_7406462_2 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009984 322.0
SYD3_k127_7406462_3 - - - - 0.000002205 50.0
SYD3_k127_7423588_0 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000004072 234.0
SYD3_k127_7423588_1 -O-antigen K02847 - - 0.000000000000000002399 94.0
SYD3_k127_7445994_0 Belongs to the DapA family K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 355.0
SYD3_k127_7445994_1 Amidohydrolase - - - 0.0000000000000000000000000000002062 126.0
SYD3_k127_7446548_0 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 589.0
SYD3_k127_7446548_1 Domain present in PSD-95, Dlg, and ZO-1/2. K08070 - 1.3.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004569 481.0
SYD3_k127_7446548_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000997 481.0
SYD3_k127_7446548_3 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 422.0
SYD3_k127_7446548_4 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005872 312.0
SYD3_k127_7446548_5 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008517 286.0
SYD3_k127_744808_0 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008183 289.0
SYD3_k127_744808_1 Uncharacterized ACR, YdiU/UPF0061 family - - - 0.00000000000000000000000000000000000000000000001538 174.0
SYD3_k127_744808_2 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000008038 142.0
SYD3_k127_744808_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000000000000000008817 109.0
SYD3_k127_7452756_0 Fumarate reductase flavoprotein C-term K00239,K00244 - 1.3.5.1,1.3.5.4 4.449e-282 876.0
SYD3_k127_7452756_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 1.909e-212 668.0
SYD3_k127_7452756_10 Domain of unknown function DUF21 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000482 344.0
SYD3_k127_7452756_11 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 328.0
SYD3_k127_7452756_12 Fumarase C-terminus K01678,K03780 - 4.2.1.2,4.2.1.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 317.0
SYD3_k127_7452756_13 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 317.0
SYD3_k127_7452756_14 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 311.0
SYD3_k127_7452756_15 asparaginase K01424,K13051 - 3.4.19.5,3.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 307.0
SYD3_k127_7452756_16 PFAM EAL domain, GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005228 289.0
SYD3_k127_7452756_17 UTRA K03710 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001242 259.0
SYD3_k127_7452756_18 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008828 250.0
SYD3_k127_7452756_19 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000008576 214.0
SYD3_k127_7452756_2 D-galactarate dehydratase / Altronate hydrolase, C terminus K16846 - 4.4.1.24 1.044e-209 656.0
SYD3_k127_7452756_20 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000000000000000000000000000004576 207.0
SYD3_k127_7452756_21 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000000000000000000001242 199.0
SYD3_k127_7452756_22 acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000008815 192.0
SYD3_k127_7452756_23 PFAM acyl-CoA dehydrogenase domain protein - - - 0.000000000000000000000000000000000000004964 162.0
SYD3_k127_7452756_24 SAF K16845 - 4.4.1.24 0.0000000000000000000000000000000000001463 143.0
SYD3_k127_7452756_25 Domain of unknown function (DUF1330) - - - 0.0000000000000000000000000000000000003604 141.0
SYD3_k127_7452756_26 succinate dehydrogenase K00247 - - 0.00000000000000000000000000000000008773 147.0
SYD3_k127_7452756_27 succinate dehydrogenase K00246 - - 0.00000000000000000000000000000008818 129.0
SYD3_k127_7452756_28 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000000000001483 127.0
SYD3_k127_7452756_29 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.0000000000000000916 83.0
SYD3_k127_7452756_3 PFAM type II secretion system K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 604.0
SYD3_k127_7452756_4 Fe-S type, tartrate fumarate subfamily, alpha subunit K03779 - 4.2.1.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009331 467.0
SYD3_k127_7452756_5 COG3119 Arylsulfatase A and related enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005927 407.0
SYD3_k127_7452756_6 Malate/L-lactate dehydrogenase K16844 - 1.1.1.338 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 389.0
SYD3_k127_7452756_7 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004497 377.0
SYD3_k127_7452756_8 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002785 357.0
SYD3_k127_7452756_9 PFAM Cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 356.0
SYD3_k127_7507579_0 Methionine synthase K00548 - 2.1.1.13 0.0 1335.0
SYD3_k127_7507579_1 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0 1247.0
SYD3_k127_7507579_10 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002136 269.0
SYD3_k127_7507579_11 rhodanese-related sulfurtransferase - - - 0.0000000000000000000000000000000000000000000000000000000000002021 214.0
SYD3_k127_7507579_12 Cupin domain - - - 0.00000000000000000000000000000000000000000000000006559 181.0
SYD3_k127_7507579_13 - - - - 0.0000000000369 70.0
SYD3_k127_7507579_2 cytochrome bd ubiquinol oxidase, subunit I K00425 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003051 573.0
SYD3_k127_7507579_3 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005194 464.0
SYD3_k127_7507579_4 Glutathione S-transferase K07393 GO:0003674,GO:0003824,GO:0004364,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0016491,GO:0016667,GO:0016672,GO:0016740,GO:0016765,GO:0042221,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.8.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008414 429.0
SYD3_k127_7507579_5 drug resistance transporter, Bcr CflA subfamily K07552 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004907 388.0
SYD3_k127_7507579_6 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004077 378.0
SYD3_k127_7507579_7 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004465 319.0
SYD3_k127_7507579_8 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004742 322.0
SYD3_k127_7507579_9 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 304.0
SYD3_k127_7530437_0 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000002641 228.0
SYD3_k127_7530437_1 MerR, DNA binding - - - 0.000000000000000000000000000000001666 134.0
SYD3_k127_7530437_2 - - - - 0.000002515 53.0
SYD3_k127_7562895_0 PFAM binding-protein-dependent transport systems inner membrane component K02011 - - 2.182e-273 849.0
SYD3_k127_7562895_1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 5.449e-270 857.0
SYD3_k127_7562895_10 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000002828 216.0
SYD3_k127_7562895_11 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000000000000000000003177 209.0
SYD3_k127_7562895_12 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.0000000000000000000000000000000000001438 144.0
SYD3_k127_7562895_13 Energy production and conversion K09181 - - 0.000000000000000000000000000000000001016 145.0
SYD3_k127_7562895_14 - - - - 0.00000000000000000000000197 106.0
SYD3_k127_7562895_15 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01897 - 6.2.1.3 0.0000000000000000724 81.0
SYD3_k127_7562895_16 PFAM Protein required for attachment to host cells - - - 0.000000623 55.0
SYD3_k127_7562895_2 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 553.0
SYD3_k127_7562895_3 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 484.0
SYD3_k127_7562895_4 reductase K00021 - 1.1.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005862 454.0
SYD3_k127_7562895_5 Protein of unknown function (DUF3419) K13622 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 383.0
SYD3_k127_7562895_6 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K22319 - 6.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 373.0
SYD3_k127_7562895_7 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 330.0
SYD3_k127_7562895_8 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000615 274.0
SYD3_k127_7562895_9 dolichyl monophosphate biosynthetic process K00981,K18678 - 2.7.1.182,2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000000005795 254.0
SYD3_k127_7595669_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 7.853e-243 758.0
SYD3_k127_7595669_1 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000001535 196.0
SYD3_k127_7595669_2 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.000000000000000000004151 94.0
SYD3_k127_7607933_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 391.0
SYD3_k127_7607933_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000008927 131.0
SYD3_k127_7618119_0 Cytochrome c oxidase subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006529 409.0
SYD3_k127_7618119_1 PFAM Cytochrome c oxidase assembly protein CtaG Cox11 K02258 - - 0.0000000000000000000000000000000000000000000000000000000000000000000163 238.0
SYD3_k127_7618119_2 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.00000000000000000000000000000000000000003163 153.0
SYD3_k127_7618119_3 SURF1-like protein K14998 - - 0.00000000000000000007996 94.0
SYD3_k127_7618119_4 Protein of unknown function (DUF2909) - - - 0.000000000000001012 79.0
SYD3_k127_7618119_5 Protein of unknown function (DUF2970) - - - 0.0000000000005984 72.0
SYD3_k127_7656058_0 RND efflux system, outer membrane lipoprotein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 396.0
SYD3_k127_7656058_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000009214 198.0
SYD3_k127_7656058_2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.000000000000000006633 92.0
SYD3_k127_7683561_0 Belongs to the UbiD family K03182 - 4.1.1.98 5.891e-241 755.0
SYD3_k127_7683561_1 NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form K12410 - - 0.000000000000000000000000000000000000000004474 158.0
SYD3_k127_7683561_2 2-dehydropantoate 2-reductase K00077 - 1.1.1.169 0.00000001766 57.0
SYD3_k127_7688797_0 His Kinase A (phosphoacceptor) domain - - - 1.582e-261 841.0
SYD3_k127_7688797_1 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 4.374e-239 761.0
SYD3_k127_7688797_2 Class II Aldolase and Adducin N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000579 315.0
SYD3_k127_7688797_3 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K22229 - 1.1.1.215 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004947 305.0
SYD3_k127_7688797_4 response regulator receiver K07659 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001336 261.0
SYD3_k127_7688797_5 DEAD DEAH box K03724 - - 0.000000000000000000000000000000000000000000004897 170.0
SYD3_k127_7688797_6 Bacterial OB fold (BOF) protein - - - 0.0000001992 60.0
SYD3_k127_7688797_7 conserved protein, contains double-stranded beta-helix domain - - - 0.0002091 50.0
SYD3_k127_7690347_0 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008711 519.0
SYD3_k127_7690347_1 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005007 453.0
SYD3_k127_7690347_2 SMART cyclic nucleotide-binding K10914 - - 0.0000000000000000000000000000000000000000000000000000002504 203.0
SYD3_k127_7690347_3 effector of murein hydrolase - - - 0.00000000000000000000000000000000000000000001845 174.0
SYD3_k127_7690347_4 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000008379 137.0
SYD3_k127_7690347_5 Major Facilitator Superfamily - - - 0.0000000000000000000000001544 106.0
SYD3_k127_7690347_7 Increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation. Inhibited by the antiholin-like proteins LrgAB. In an unstressed cell, the LrgAB products probably inhibit the function of the CidA protein. When a cell is stressed by the addition of antibiotics or by other factors in the environment, CidA possibly oligomerizes within the bacterial cell membrane, creating lesions that disrupt the proton motive force, which in turn results in loss of cell viability. These lesions are also hypothesized to regulate the subsequent cell lysis by either allowing the murein hydrolases access to the cell wall substrate and or regulating their activity by a K06518 - - 0.00000000000000000009649 95.0
SYD3_k127_7691898_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0045333,GO:0046459,GO:0047456,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:1901363 4.2.1.3 2.5e-244 770.0
SYD3_k127_7753706_0 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000003263 169.0
SYD3_k127_7753706_1 - - - - 0.000000000000000000006928 96.0
SYD3_k127_7788264_0 CoA-binding domain protein K01905,K22224 - 6.2.1.13 8.496e-207 662.0
SYD3_k127_7788264_1 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005185 485.0
SYD3_k127_7788264_2 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 409.0
SYD3_k127_7788264_3 PFAM Metal-dependent phosphohydrolase, HD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 313.0
SYD3_k127_7788264_4 Catalyzes the conversion of maleate to fumarate K01799,K06033 - 4.1.1.76,5.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001052 286.0
SYD3_k127_7788264_5 Tripartite tricarboxylate transporter family receptor - - - 0.0001969 49.0
SYD3_k127_7791567_0 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000001799 161.0
SYD3_k127_7791567_1 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000009207 125.0
SYD3_k127_7791567_2 Protein of unknown function (DUF3108) - - - 0.000005234 56.0
SYD3_k127_7808886_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 565.0
SYD3_k127_7808886_1 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 542.0
SYD3_k127_7808886_2 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 515.0
SYD3_k127_7808886_3 HflC and HflK could regulate a protease K04087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006256 436.0
SYD3_k127_7808886_4 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.000000000000000000000000000000000000000000000000000000000000004201 221.0
SYD3_k127_7808886_5 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000000000000000000000001079 148.0
SYD3_k127_7808886_6 protein conserved in bacteria K09937 - - 0.0000000000000000000002218 98.0
SYD3_k127_7922980_0 Adenylate cyclase K01768 - 4.6.1.1 0.000000008064 61.0
SYD3_k127_79286_0 Amidohydrolase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 343.0
SYD3_k127_7967891_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 1.677e-301 930.0
SYD3_k127_7967891_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000004883 86.0
SYD3_k127_7984966_0 Tartrate dehydrogenase K07246 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.83,1.1.1.93,4.1.1.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008565 539.0
SYD3_k127_7984966_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001012 279.0
SYD3_k127_7984966_2 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000001164 263.0
SYD3_k127_7984966_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000008768 240.0
SYD3_k127_7984966_4 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000000000000292 217.0
SYD3_k127_7984966_5 small integral membrane protein - - - 0.00000000000000000000000000001152 127.0
SYD3_k127_7984966_6 RimK-like ATPgrasp N-terminal domain - - - 0.00000000000008185 71.0
SYD3_k127_7984966_7 - - - - 0.0000000000001122 73.0
SYD3_k127_7984966_8 cell redox homeostasis - - - 0.0000000000002336 75.0
SYD3_k127_7984966_9 - - - - 0.000000000011 71.0
SYD3_k127_8017751_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 3.724e-212 662.0
SYD3_k127_8090751_0 PFAM Integrase core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 459.0
SYD3_k127_8090751_1 PFAM IstB-like ATP binding protein - - - 0.0000000000000000000000000000000000000000000007005 172.0
SYD3_k127_8175201_0 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000161 164.0
SYD3_k127_8175201_1 Amidase K02433,K19837 - 3.5.1.84,6.3.5.6,6.3.5.7 0.000000000000000000000000004259 113.0
SYD3_k127_8175201_2 Cupin domain - - - 0.00000000000000001131 92.0
SYD3_k127_8175201_3 2-keto-4-pentenoate hydratase K18364 - 4.2.1.132,4.2.1.80 0.0000000000004144 79.0
SYD3_k127_8176626_0 AMP-binding enzyme C-terminal domain K00666 - - 3.888e-266 833.0
SYD3_k127_8176626_1 abc transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 396.0
SYD3_k127_8176626_2 PFAM ABC transporter related K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 347.0
SYD3_k127_8176626_3 ABC-type branched-chain amino acid transport systems periplasmic component K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000001612 246.0
SYD3_k127_8176626_4 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000004834 134.0
SYD3_k127_8181941_0 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01684 - 4.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 482.0
SYD3_k127_8181941_1 COG0412 Dienelactone hydrolase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000002325 222.0
SYD3_k127_8197226_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 2.476e-318 989.0
SYD3_k127_8197226_1 FecR protein - - - 0.000000000000000000000000000000003393 137.0
SYD3_k127_8202395_0 histidine kinase A domain protein - - - 2.399e-282 889.0
SYD3_k127_8205308_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 1.723e-311 969.0
SYD3_k127_8205308_1 NADH Ubiquinone plastoquinone (Complex I) K12141 - - 6.48e-228 709.0
SYD3_k127_8205308_10 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.000000000000000000000000000000000000000000000000000513 189.0
SYD3_k127_8205308_2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 1.871e-215 679.0
SYD3_k127_8205308_3 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 1.697e-208 653.0
SYD3_k127_8205308_4 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008166 578.0
SYD3_k127_8205308_5 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 462.0
SYD3_k127_8205308_6 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007789 465.0
SYD3_k127_8205308_7 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 353.0
SYD3_k127_8205308_8 NADH ubiquinone oxidoreductase 20 kDa subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000271 282.0
SYD3_k127_8205308_9 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000005247 208.0
SYD3_k127_8206102_0 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004863 302.0
SYD3_k127_8206102_1 RNA recognition motif - - - 0.000000000000000000000000000000000257 135.0
SYD3_k127_8206102_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000008468 60.0
SYD3_k127_8211421_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 1.69e-281 877.0
SYD3_k127_8211421_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 9.839e-234 732.0
SYD3_k127_8211421_10 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007282 496.0
SYD3_k127_8211421_11 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 449.0
SYD3_k127_8211421_12 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 409.0
SYD3_k127_8211421_13 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 301.0
SYD3_k127_8211421_14 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002971 299.0
SYD3_k127_8211421_15 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006084 302.0
SYD3_k127_8211421_16 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002974 284.0
SYD3_k127_8211421_17 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002522 278.0
SYD3_k127_8211421_18 Phosphotransferase system, mannose fructose-specific component IIA K02821 - 2.7.1.194 0.0000000000000000000000000000000000000000000000004166 178.0
SYD3_k127_8211421_19 Rod shape-determining protein MreD K03571 - - 0.0000000000000000000000000000000000000000000002891 181.0
SYD3_k127_8211421_2 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 8.37e-230 724.0
SYD3_k127_8211421_20 Belongs to the P(II) protein family K04752 - - 0.000000000000000000000000000000000000000005454 154.0
SYD3_k127_8211421_21 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000001792 128.0
SYD3_k127_8211421_22 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000000000000003365 137.0
SYD3_k127_8211421_23 Phosphotransferase System K11189 - - 0.000000000000000000000000000004853 121.0
SYD3_k127_8211421_24 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000000000502 120.0
SYD3_k127_8211421_25 - - - - 0.000001277 58.0
SYD3_k127_8211421_3 Ammonium Transporter K03320 - - 2.169e-226 709.0
SYD3_k127_8211421_4 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 6.655e-221 698.0
SYD3_k127_8211421_5 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 3.64e-218 684.0
SYD3_k127_8211421_6 Cell shape determining protein, MreB Mrl family K03569 - - 2.888e-194 609.0
SYD3_k127_8211421_7 Major facilitator superfamily K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 607.0
SYD3_k127_8211421_8 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 601.0
SYD3_k127_8211421_9 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005855 514.0
SYD3_k127_8223237_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0 1034.0
SYD3_k127_8223237_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 5.394e-216 676.0
SYD3_k127_8223237_2 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 347.0
SYD3_k127_8223237_3 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 343.0
SYD3_k127_8223237_4 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000000000000000002189 207.0
SYD3_k127_8223237_5 Binds single-stranded DNA at the primosome assembly site (PAS) K02686 - - 0.00000000000000000124 96.0
SYD3_k127_8224363_0 ABC transporter K15738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 600.0
SYD3_k127_8224363_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 383.0
SYD3_k127_8224363_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005904 269.0
SYD3_k127_8224363_3 VacJ family lipoprotein K04754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005042 265.0
SYD3_k127_8224363_4 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000001356 228.0
SYD3_k127_8224363_5 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000007615 215.0
SYD3_k127_8224363_6 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.0000000000000000000000000000000000000000000000006831 177.0
SYD3_k127_8224363_7 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls - - - 0.00000000000000000000000000000000000006469 159.0
SYD3_k127_8235939_0 Type II secretion system (T2SS), protein E, N-terminal domain - - - 3.732e-250 783.0
SYD3_k127_8235939_1 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 9.203e-212 666.0
SYD3_k127_8235939_10 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 439.0
SYD3_k127_8235939_11 abc transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005015 419.0
SYD3_k127_8235939_12 PFAM Sporulation domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 431.0
SYD3_k127_8235939_13 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 423.0
SYD3_k127_8235939_14 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006109 409.0
SYD3_k127_8235939_15 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007382 403.0
SYD3_k127_8235939_16 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 404.0
SYD3_k127_8235939_17 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 390.0
SYD3_k127_8235939_18 ABC-type uncharacterized transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002941 406.0
SYD3_k127_8235939_19 4-phosphoerythronate dehydrogenase activity K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000528 385.0
SYD3_k127_8235939_2 Amidohydrolase K07045 - - 1.198e-206 654.0
SYD3_k127_8235939_20 Glutathione S-transferase, N-terminal domain K03599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 356.0
SYD3_k127_8235939_21 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 367.0
SYD3_k127_8235939_22 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 353.0
SYD3_k127_8235939_23 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007109 326.0
SYD3_k127_8235939_24 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007851 328.0
SYD3_k127_8235939_25 major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 331.0
SYD3_k127_8235939_26 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 315.0
SYD3_k127_8235939_27 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003495 310.0
SYD3_k127_8235939_28 FMN-dependent alpha-hydroxy acid dehydrogenase K00101,K15054 - 1.1.2.3,1.1.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007426 314.0
SYD3_k127_8235939_29 Cytochrome C1 K00413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 311.0
SYD3_k127_8235939_3 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 8.736e-196 627.0
SYD3_k127_8235939_30 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 301.0
SYD3_k127_8235939_31 ATPase activity, coupled to transmembrane movement of substances - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007048 296.0
SYD3_k127_8235939_32 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001568 283.0
SYD3_k127_8235939_33 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000002062 268.0
SYD3_k127_8235939_34 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.00000000000000000000000000000000000000000000000000000000000000001057 231.0
SYD3_k127_8235939_35 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.00000000000000000000000000000000000000000000000000000000001018 211.0
SYD3_k127_8235939_36 - - - - 0.00000000000000000000000000000000000000000000000000000000001203 211.0
SYD3_k127_8235939_37 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000000000000000001615 216.0
SYD3_k127_8235939_38 - - - - 0.0000000000000000000000000000000000000000000000000002878 196.0
SYD3_k127_8235939_39 ATP-grasp K01955 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000407 197.0
SYD3_k127_8235939_4 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007573 600.0
SYD3_k127_8235939_40 Domain of unknown function (DUF4340) - - - 0.00000000000000000000000000000000000000000003824 179.0
SYD3_k127_8235939_41 Stringent starvation protein B K03600 - - 0.00000000000000000000000000000000000000002225 157.0
SYD3_k127_8235939_42 belongs to the thioredoxin family K03671,K05838 - - 0.00000000000000000000000000000000000000005595 168.0
SYD3_k127_8235939_43 phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.000000000000000000000000000000000000008074 151.0
SYD3_k127_8235939_44 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.0000000000000000000000000000000329 130.0
SYD3_k127_8235939_45 Belongs to the BolA IbaG family - - - 0.0000000000000000000000002092 115.0
SYD3_k127_8235939_46 transporter antisigma-factor antagonist STAS K07122 - - 0.000000000000000000000008016 106.0
SYD3_k127_8235939_47 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000000002863 96.0
SYD3_k127_8235939_5 Bacterial regulatory protein, Fis family K07712 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008113 561.0
SYD3_k127_8235939_6 Belongs to the TPP enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005655 542.0
SYD3_k127_8235939_7 Type II and III secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002939 499.0
SYD3_k127_8235939_8 PFAM type II secretion system K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009332 463.0
SYD3_k127_8235939_9 Belongs to the peptidase S1C family K04691,K04772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 461.0
SYD3_k127_8247074_0 Protein of unknown function (DUF1343) - - - 4.039e-214 671.0
SYD3_k127_8247074_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001029 282.0
SYD3_k127_8247074_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000194 241.0
SYD3_k127_8247074_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000002477 220.0
SYD3_k127_8247074_4 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000001618 211.0
SYD3_k127_8247074_5 Amidohydrolase K03392,K10220 - 4.1.1.45,4.2.1.83 0.000000000000000000000000000000000000000000001711 166.0
SYD3_k127_8247074_6 - - - - 0.0001502 50.0
SYD3_k127_8248736_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000002201 215.0
SYD3_k127_8248736_1 Bacterial-like globin K06886 - - 0.00000000000000001931 83.0
SYD3_k127_8258859_0 Helicase associated domain (HA2) Add an annotation K03578 - 3.6.4.13 0.0 1567.0
SYD3_k127_8258859_1 major facilitator superfamily K03446 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007165 447.0
SYD3_k127_8258859_2 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003541 285.0
SYD3_k127_8258859_3 SMART metal-dependent phosphohydrolase, HD region K01139 - 2.7.6.5,3.1.7.2 0.000000000000000000000000000000000000000000000000000000000000000138 229.0
SYD3_k127_8258859_4 MazG-like family - - - 0.000000000000000000000000000000000000000005834 158.0
SYD3_k127_8258859_5 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000001795 147.0
SYD3_k127_8260691_0 Amidohydrolase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005271 329.0
SYD3_k127_8260691_1 EVE domain - - - 0.000000000000000000000000000000000000000000000000000000000000472 215.0
SYD3_k127_8260691_2 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000003709 197.0
SYD3_k127_8260691_3 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000000000000000000000005295 131.0
SYD3_k127_8260691_4 Isochorismatase family - - - 0.00000000000000000000001765 105.0
SYD3_k127_8260691_5 - - - - 0.0000000000000006976 79.0
SYD3_k127_8260773_0 PFAM Protein kinase K11912,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 529.0
SYD3_k127_8260773_1 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 323.0
SYD3_k127_8260773_2 Psort location CytoplasmicMembrane, score 10.00 K03458 - - 0.00000000000000000000000000000000000000000006534 167.0
SYD3_k127_8260773_3 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000009978 153.0
SYD3_k127_8263982_0 MmgE/PrpD family - - - 5.497e-196 621.0
SYD3_k127_8263982_1 PFAM Isocitrate lyase family K03417,K20454 - 4.1.3.30,4.1.3.32 0.00000000000000000000000000000000000001009 149.0
SYD3_k127_8263982_2 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000007328 144.0
SYD3_k127_8266752_0 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K03520 - 1.2.5.3 0.0 1268.0
SYD3_k127_8266752_1 FAD binding domain in molybdopterin dehydrogenase K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003879 324.0
SYD3_k127_8266752_2 Transcriptional regulator K03710 - - 0.0000000000000000000000000000000000000000000000000000000001916 209.0
SYD3_k127_8273141_0 NADPH-dependent FMN reductase K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000718 288.0
SYD3_k127_8273141_1 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000002698 127.0
SYD3_k127_8279932_0 SMART alpha amylase catalytic sub domain K05343 - 3.2.1.1,5.4.99.16 0.0 1538.0
SYD3_k127_8279932_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1062.0
SYD3_k127_8279932_2 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1036.0
SYD3_k127_8279932_3 TIGRFAM malto-oligosyltrehalose trehalohydrolase K01236 - 3.2.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 421.0
SYD3_k127_8279932_4 PFAM Conserved TM helix repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 295.0
SYD3_k127_828337_0 Domain of unknown function (DUF3943) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006878 493.0
SYD3_k127_8294887_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 8.494e-239 751.0
SYD3_k127_8294887_1 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 448.0
SYD3_k127_8294887_2 Conserved TM helix - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002173 247.0
SYD3_k127_8294887_3 2-keto-4-pentenoate hydratase K01617 - 4.1.1.77 0.0000000000000002096 83.0
SYD3_k127_8294887_4 MgtE intracellular N domain - - - 0.0000000000001347 81.0
SYD3_k127_8301722_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 424.0
SYD3_k127_8302862_0 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002894 437.0
SYD3_k127_8302862_1 maturation factor XdhC CoxF family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 365.0
SYD3_k127_8302862_2 - - - - 0.0000000000000003392 84.0
SYD3_k127_8307769_0 PFAM EAL domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000237 560.0
SYD3_k127_8307769_1 L-carnitine dehydratase bile acid-inducible protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004686 461.0
SYD3_k127_8307769_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000427 298.0
SYD3_k127_8307769_3 Surface antigen K07278 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 302.0
SYD3_k127_8307769_4 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000342 289.0
SYD3_k127_8307769_5 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005009 269.0
SYD3_k127_8307769_6 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008489 265.0
SYD3_k127_8307769_7 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005855 257.0
SYD3_k127_8307769_8 N-terminal half of MaoC dehydratase K09709,K18291 - 4.2.1.153,4.2.1.56 0.00005684 46.0
SYD3_k127_8315853_0 Biotin carboxylase C-terminal domain K01965 - 6.4.1.3 1.273e-228 717.0
SYD3_k127_8315853_1 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007308 338.0
SYD3_k127_8315853_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000001054 254.0
SYD3_k127_8315853_3 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000008827 153.0
SYD3_k127_8315853_4 Belongs to the 'phage' integrase family - - - 0.0000000000000000003284 91.0
SYD3_k127_8315853_5 Glutathione-dependent formaldehyde-activating - - - 0.0000000000001245 70.0
SYD3_k127_8316519_0 Pyruvate synthase K00169 - 1.2.7.1 6.18e-198 627.0
SYD3_k127_8316519_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00266 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 549.0
SYD3_k127_8316519_2 domain protein K00528,K16951 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001346 278.0
SYD3_k127_8316519_3 - - - - 0.00000000000000000000000000000000000000000000003627 177.0
SYD3_k127_8316519_4 COG2801 Transposase and inactivated derivatives - - - 0.0000000000000000000000000003556 114.0
SYD3_k127_8324217_0 Peptidogalycan biosysnthesis/recognition K09919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 317.0
SYD3_k127_8324217_1 esterase K03932 - - 0.0000000003584 64.0
SYD3_k127_8325586_0 17 kDa surface antigen - - - 0.00000000000000000000000000000000000000004346 160.0
SYD3_k127_8325586_1 Domain of unknown function (DUF4168) - - - 0.000000001107 65.0
SYD3_k127_8331358_0 cell redox homeostasis - - - 0.00000000000000000000000000000000000000000000000000000000000000005511 233.0
SYD3_k127_8331358_1 - - - - 0.000000000003416 68.0
SYD3_k127_8331358_2 - - - - 0.00000001359 61.0
SYD3_k127_8348839_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 509.0
SYD3_k127_8348839_1 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006405 291.0
SYD3_k127_8348839_2 Tetrapyrrole (Corrin/Porphyrin) Methylases K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000003789 259.0
SYD3_k127_8348839_3 FecR protein - - - 0.000000000000000000000000000000000000000000000000000000000000006551 239.0
SYD3_k127_8348839_4 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000006195 218.0
SYD3_k127_8348839_5 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000000000000004687 126.0
SYD3_k127_8348839_6 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000000000000005866 119.0
SYD3_k127_8348839_7 COG3209 Rhs family protein K15125 - - 0.0000001472 66.0
SYD3_k127_8354232_0 ABC transporter K10004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 407.0
SYD3_k127_8354232_1 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K02029,K10002 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 319.0
SYD3_k127_8358354_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 3.049e-203 642.0
SYD3_k127_8358354_1 oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007555 555.0
SYD3_k127_8358354_2 Oxidoreductase K10219 - 1.1.1.312 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006693 460.0
SYD3_k127_8358354_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001617 280.0
SYD3_k127_8358354_4 LysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000721 268.0
SYD3_k127_8358354_5 Cupin 2, conserved barrel domain protein K11312 - - 0.00000000000000000000000000000000000000000000000000000000186 205.0
SYD3_k127_8360753_0 DNA polymerase X family K02347 - - 1.563e-252 790.0
SYD3_k127_8360753_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 6.147e-232 731.0
SYD3_k127_8360753_10 - - - - 0.00000000000000000000000000000002093 132.0
SYD3_k127_8360753_11 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000004726 125.0
SYD3_k127_8360753_12 Bacterial protein of unknown function (DUF883) - - - 0.0000000000000003375 84.0
SYD3_k127_8360753_2 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007168 542.0
SYD3_k127_8360753_3 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006746 526.0
SYD3_k127_8360753_4 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 507.0
SYD3_k127_8360753_5 RND efflux system, outer membrane lipoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007754 504.0
SYD3_k127_8360753_6 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 468.0
SYD3_k127_8360753_7 Pfam ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007373 362.0
SYD3_k127_8360753_8 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000007896 161.0
SYD3_k127_8360753_9 Universal stress protein - - - 0.0000000000000000000000000000000000001073 147.0
SYD3_k127_8362716_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006603 593.0
SYD3_k127_8362716_1 HrcA protein C terminal domain K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005019 475.0
SYD3_k127_8362716_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 373.0
SYD3_k127_8362716_3 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006033 360.0
SYD3_k127_8362716_4 Ferrochelatase K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 353.0
SYD3_k127_8362716_5 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002598 276.0
SYD3_k127_8362716_6 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000000000000000000000000001392 237.0
SYD3_k127_8362716_7 SmpA / OmlA family K06186 - - 0.0000000000000000000000000000000005669 138.0
SYD3_k127_8363858_0 CoA-transferase family III K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 514.0
SYD3_k127_8363858_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006856 393.0
SYD3_k127_8363858_2 Nitrile hydratase, alpha chain K01721 - 4.2.1.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006579 316.0
SYD3_k127_8363858_3 NHase catalyzes the hydration of various nitrile compounds to the corresponding amides K20807 - 4.2.1.84 0.000000000000000000000000000000000000000000000000000000000000000000001454 248.0
SYD3_k127_8363858_5 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.11.1.15 0.0001209 45.0
SYD3_k127_8366125_0 catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-acp K00646,K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0016740,GO:0016746,GO:0016747,GO:0033817 2.3.1.179 1.001e-214 672.0
SYD3_k127_8366125_1 reductase K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007324 342.0
SYD3_k127_8366125_2 PFAM Aminotransferase, class IV K02619 - 4.1.3.38 0.000000000000000000000000000000000000000000000003986 179.0
SYD3_k127_8366125_3 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000000001431 136.0
SYD3_k127_8366125_4 Malonyl CoA-acyl carrier protein transacylase K00645,K15355 GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 0.00000000006239 63.0
SYD3_k127_8387098_0 PFAM Mur ligase middle domain protein K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 480.0
SYD3_k127_8387098_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 464.0
SYD3_k127_8387098_2 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 344.0
SYD3_k127_8387098_3 Sporulation related domain K03749 - - 0.000000000000000000000000000000002163 138.0
SYD3_k127_8387098_4 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000707 86.0
SYD3_k127_8390509_0 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000000000000000000000122 215.0
SYD3_k127_8390509_1 cytochrome - - - 0.00000000000006437 78.0
SYD3_k127_8393978_0 Enoyl-CoA hydratase/isomerase K13766 - 4.2.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000003076 255.0
SYD3_k127_8393978_1 carboxylase K01969 - 6.4.1.4 0.000000000000000000000000000000000000000000000000000001107 193.0
SYD3_k127_8394588_0 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004161 312.0
SYD3_k127_8394588_1 Isocitrate/isopropylmalate dehydrogenase K00031,K00052,K07246 - 1.1.1.42,1.1.1.83,1.1.1.85,1.1.1.93,4.1.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001963 282.0
SYD3_k127_8394588_2 Stress protein K05791 - - 0.00000000000000000000009631 104.0
SYD3_k127_8412634_0 Domain of Unknown Function (DUF748) - - - 5.013e-244 794.0
SYD3_k127_8412634_1 COG0457 FOG TPR repeat - - - 6.004e-229 722.0
SYD3_k127_8412634_10 NADP oxidoreductase, coenzyme f420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 306.0
SYD3_k127_8412634_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003849 312.0
SYD3_k127_8412634_12 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001429 285.0
SYD3_k127_8412634_13 of the double-stranded beta helix - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001521 257.0
SYD3_k127_8412634_14 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001812 261.0
SYD3_k127_8412634_15 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004261 248.0
SYD3_k127_8412634_16 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000002279 245.0
SYD3_k127_8412634_17 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000000000000000000000002888 211.0
SYD3_k127_8412634_18 Tripartite tricarboxylate transporter family receptor K07795 - - 0.00000000000000000000000000000000000000000000000000006939 200.0
SYD3_k127_8412634_19 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000001392 197.0
SYD3_k127_8412634_2 nitrite reductase K00368 - 1.7.2.1 1.805e-213 672.0
SYD3_k127_8412634_20 COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) K05770 - - 0.0000000000000000000000000000000000000000000001744 175.0
SYD3_k127_8412634_21 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000297 88.0
SYD3_k127_8412634_22 Tripartite tricarboxylate transporter TctB family - - - 0.00002978 52.0
SYD3_k127_8412634_23 - - - - 0.0007214 50.0
SYD3_k127_8412634_3 ATP ADP translocase K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 578.0
SYD3_k127_8412634_4 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 540.0
SYD3_k127_8412634_5 Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 511.0
SYD3_k127_8412634_6 Aldo keto - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004155 384.0
SYD3_k127_8412634_7 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007972 379.0
SYD3_k127_8412634_8 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 378.0
SYD3_k127_8412634_9 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009906 322.0
SYD3_k127_8416670_0 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 604.0
SYD3_k127_8416670_1 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 450.0
SYD3_k127_8416670_10 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000003724 134.0
SYD3_k127_8416670_12 Tripartite tricarboxylate transporter family receptor - - - 0.000006327 51.0
SYD3_k127_8416670_2 MmgE PrpD family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005037 441.0
SYD3_k127_8416670_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 430.0
SYD3_k127_8416670_4 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007287 277.0
SYD3_k127_8416670_5 Amidohydrolase K03392 - 4.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002967 281.0
SYD3_k127_8416670_6 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000001658 215.0
SYD3_k127_8416670_7 transporter component K07112 - - 0.0000000000000000000000000000000000000000000000000000004874 198.0
SYD3_k127_8416670_8 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000003203 185.0
SYD3_k127_8416670_9 Domain of unknown function (DUF4154) - - - 0.00000000000000000000000000000000002917 146.0
SYD3_k127_8460626_0 N-terminal half of MaoC dehydratase K09709,K18291 - 4.2.1.153,4.2.1.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003432 279.0
SYD3_k127_8460626_1 HpcH/HpaI aldolase/citrate lyase family K01644 - 4.1.3.34 0.000000000000000000000001191 105.0
SYD3_k127_8465617_0 fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 595.0
SYD3_k127_8465617_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 528.0
SYD3_k127_8465617_2 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 332.0
SYD3_k127_8465617_3 GAF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003656 344.0
SYD3_k127_8465617_4 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000002492 243.0
SYD3_k127_8465617_5 Ribosomal L28 family K02902 - - 0.000000000000000000000000000000000003744 138.0
SYD3_k127_8465617_6 cobalamin (vitamin B12) biosynthesis CbiX protein K03795 - 4.99.1.3 0.0000000000000000000000000002826 124.0
SYD3_k127_8465617_7 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000000002715 99.0
SYD3_k127_8465617_8 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000005836 88.0
SYD3_k127_8476902_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 1.124e-233 738.0
SYD3_k127_8476902_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 565.0
SYD3_k127_8478204_0 PFAM FAD linked oxidase - - - 1.426e-233 730.0
SYD3_k127_8478204_1 LysR substrate binding domain K03566 GO:0001130,GO:0001131,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006776 289.0
SYD3_k127_8478204_2 PFAM amidohydrolase 2 K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000004763 218.0
SYD3_k127_8478204_3 PFAM Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000007793 216.0
SYD3_k127_8478204_4 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.00000000000000000000000000000001925 132.0
SYD3_k127_8478204_5 redox protein regulator of disulfide bond formation - - - 0.0000000000000000000000000007269 115.0
SYD3_k127_8478204_6 mandelate racemase muconate lactonizing K20023 - 4.2.1.156,4.2.1.42 0.000000009088 59.0
SYD3_k127_8487706_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 7.776e-197 619.0
SYD3_k127_8487706_1 Protein of unknown function (DUF3999) - - - 0.0000000000000000000000000001088 119.0
SYD3_k127_8487706_2 Nucleoside H+ symporter K05820 - - 0.0000001841 60.0
SYD3_k127_850152_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005623 321.0
SYD3_k127_850152_1 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000005677 162.0
SYD3_k127_850152_2 Belongs to the N-Me-Phe pilin family K02650,K02655 - - 0.0000000000000000000000000000000000000005009 156.0
SYD3_k127_850152_3 SapC - - - 0.0000000000000000000000000000000000002489 151.0
SYD3_k127_850152_4 Domain of unknown function (DUF4382) - - - 0.0000000000000000000006124 109.0
SYD3_k127_8520070_0 L-lactate dehydrogenase K00101,K15054 - 1.1.2.3,1.1.99.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 451.0
SYD3_k127_8520070_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 306.0
SYD3_k127_8520070_2 extra-cytoplasmic solute receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009957 284.0
SYD3_k127_8520070_3 Cupin domain - - - 0.0000000000000000000000000000000009495 138.0
SYD3_k127_8520070_4 Haloacid dehalogenase-like hydrolase K20866 - 3.1.3.10 0.00000000000000000001768 93.0
SYD3_k127_8520702_0 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 314.0
SYD3_k127_8520702_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000002326 218.0
SYD3_k127_8520702_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00003723 46.0
SYD3_k127_8525143_0 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 597.0
SYD3_k127_8525143_1 FAD linked oxidases, C-terminal domain K18930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004651 362.0
SYD3_k127_8533647_0 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000003152 127.0
SYD3_k127_8533647_1 involved in signal transduction (via phosphorylation) involved in transcriptional regulatory mechanism and in the regulation of secondary metabolites catalytic activity ATP a protein ADP a phosphoprotein - - - 0.0000008711 60.0
SYD3_k127_8560096_0 ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.0 1146.0
SYD3_k127_8560096_1 B12 binding domain - - - 5.752e-208 664.0
SYD3_k127_8560096_10 SCP-2 sterol transfer family - - - 0.000000000000000000000000321 111.0
SYD3_k127_8560096_11 Anaerobic ribonucleoside-triphosphate reductase - - - 0.000000000000000001197 87.0
SYD3_k127_8560096_12 subunit of a heme lyase K02200 - - 0.000000000006779 67.0
SYD3_k127_8560096_2 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 554.0
SYD3_k127_8560096_3 peptidase, U32 K08303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009861 492.0
SYD3_k127_8560096_4 Poly-beta-hydroxybutyrate K03821 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007681 407.0
SYD3_k127_8560096_5 PFAM peptidase U32 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 359.0
SYD3_k127_8560096_6 Tetratricopeptide repeat K02200 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 312.0
SYD3_k127_8560096_7 ribonucleoside-triphosphate reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002627 302.0
SYD3_k127_8560096_8 PFAM Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000009777 154.0
SYD3_k127_8560096_9 Universal stress protein family - - - 0.00000000000000000000000000001457 123.0
SYD3_k127_8564032_0 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006232 433.0
SYD3_k127_8564032_1 Peptidase C26 K01658,K07010 - 4.1.3.27 0.000000000000000000000000000000002827 131.0
SYD3_k127_8564032_2 Sodium/hydrogen exchanger family - - - 0.000000000000000000003568 98.0
SYD3_k127_8564052_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 1.382e-256 805.0
SYD3_k127_8564052_1 Sodium hydrogen exchanger K11105 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 516.0
SYD3_k127_8564052_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009936 426.0
SYD3_k127_8564052_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007342 376.0
SYD3_k127_8564052_4 SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 301.0
SYD3_k127_8564052_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009417 283.0
SYD3_k127_8564052_6 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001823 274.0
SYD3_k127_8564052_7 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015,K00058 - 1.1.1.26,1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000004079 154.0
SYD3_k127_8564052_8 Alkylhydroperoxidase AhpD family core domain-containing protein 7 - - - 0.00000000000000000000000000000000002075 143.0
SYD3_k127_8564052_9 preprotein translocase subunit YajC K03210 - - 0.0000000000000000000000000000000005559 133.0
SYD3_k127_8564190_0 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001945 260.0
SYD3_k127_8564190_1 LVIVD repeat - - - 0.00000000000000000000000000000000000000000000000000000001743 205.0
SYD3_k127_8564190_2 - - - - 0.000000000000005276 80.0
SYD3_k127_8564190_3 PFAM conserved - - - 0.00000886 48.0
SYD3_k127_8566706_0 Enoyl-(Acyl carrier protein) reductase K00059,K00076 - 1.1.1.100,1.1.1.159 0.000000000000000000000000000000000000000000000000002162 183.0
SYD3_k127_8566706_1 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000022 182.0
SYD3_k127_8591375_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 3.365e-212 668.0
SYD3_k127_8591375_1 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 347.0
SYD3_k127_8591375_2 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000004058 231.0
SYD3_k127_8591375_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000001523 207.0
SYD3_k127_8591375_4 Sodium hydrogen exchanger K11105 - - 0.000000000000000000000000000000000000000002135 162.0
SYD3_k127_8595624_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006685 523.0
SYD3_k127_8595624_1 Protein of unknown function (DUF1232) - - - 0.00000000000000000000000000001246 121.0
SYD3_k127_8602098_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 4.678e-204 646.0
SYD3_k127_8620411_0 MgsA AAA+ ATPase C terminal K07478 - - 9.004e-204 641.0
SYD3_k127_8620411_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000006355 52.0
SYD3_k127_8620411_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0001315 44.0
SYD3_k127_8638495_0 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K10764 - 2.5.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003292 580.0
SYD3_k127_8638495_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 557.0
SYD3_k127_8638495_2 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 292.0
SYD3_k127_8638495_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000411 272.0
SYD3_k127_8638495_4 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000003203 229.0
SYD3_k127_8638495_5 Domain of unknown function (DUF4440) - - - 0.00000000000000000000000000000000000000006461 159.0
SYD3_k127_8641246_0 Cytochrome C oxidase, mono-heme subunit/FixO K00405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 324.0
SYD3_k127_8641246_1 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 311.0
SYD3_k127_8641246_2 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.00000000000000000000000000000002017 128.0
SYD3_k127_8641246_3 PFAM Cbb3-type cytochrome oxidase component K00407 - - 0.0008302 46.0
SYD3_k127_8684849_0 AIR synthase related protein, N-terminal domain K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000002616 261.0
SYD3_k127_8684849_1 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016043,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0022607,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901135,GO:1901576 3.1.3.11 0.000000000000000000000000000000000000002867 157.0
SYD3_k127_86855_0 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 305.0
SYD3_k127_86855_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000008933 231.0
SYD3_k127_86855_2 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000001214 165.0
SYD3_k127_8689482_0 Belongs to the DEAD box helicase family K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 484.0
SYD3_k127_8689482_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006529 291.0
SYD3_k127_8689482_2 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000904 175.0
SYD3_k127_8689482_3 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000000001967 136.0
SYD3_k127_8689482_4 Cold shock K03704 - - 0.000000000000000000000000277 106.0
SYD3_k127_8710369_0 DEAD/H associated K03724 - - 1.986e-201 642.0
SYD3_k127_8710369_1 Ceramidase - - - 0.00000000000000000000000000006685 119.0
SYD3_k127_8764368_0 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007454 321.0
SYD3_k127_8764368_1 Putative prokaryotic signal transducing protein - - - 0.0000000000000000826 87.0
SYD3_k127_8764368_2 Alpha/beta hydrolase family - - - 0.00000731 51.0
SYD3_k127_8771354_0 4Fe-4S dicluster domain - - - 1.353e-234 745.0
SYD3_k127_8771354_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 565.0
SYD3_k127_8771354_10 Protein of unknown function (DUF3305) - - - 0.0000000000000000000000000000000001878 138.0
SYD3_k127_8771354_11 Protein of unknown function (DUF3306) - - - 0.0000000000000000000007917 105.0
SYD3_k127_8771354_12 - - - - 0.00003329 51.0
SYD3_k127_8771354_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005309 477.0
SYD3_k127_8771354_3 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 440.0
SYD3_k127_8771354_4 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 393.0
SYD3_k127_8771354_5 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 378.0
SYD3_k127_8771354_6 Belongs to the MtfA family K09933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 333.0
SYD3_k127_8771354_7 belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 302.0
SYD3_k127_8771354_8 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004596 280.0
SYD3_k127_8771354_9 Nitrate reductase delta subunit - - - 0.0000000000000000000000000000000000000000000008395 173.0
SYD3_k127_8800184_0 2-methylcitrate dehydratase activity K01720 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009268,GO:0009628,GO:0009987,GO:0010447,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017001,GO:0017144,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019679,GO:0019752,GO:0030312,GO:0032787,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0046459,GO:0047547,GO:0050896,GO:0071704,GO:0071944,GO:0072329,GO:1901575 4.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002276 375.0
SYD3_k127_8800184_1 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 338.0
SYD3_k127_8800184_2 PFAM Branched-chain amino acid transport system permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008051 279.0
SYD3_k127_8800184_3 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003677 272.0
SYD3_k127_8800184_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005233 263.0
SYD3_k127_8800184_5 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001755 260.0
SYD3_k127_8800184_6 Transglycosylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009676 246.0
SYD3_k127_8800184_7 amino acid K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000003863 243.0
SYD3_k127_8800942_0 ABC transporter - - - 2.901e-286 889.0
SYD3_k127_8800942_1 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004764 600.0
SYD3_k127_8800942_10 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000008727 183.0
SYD3_k127_8800942_11 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000545 166.0
SYD3_k127_8800942_12 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000009555 133.0
SYD3_k127_8800942_13 CsbD-like - - - 0.00000000000000000000000001004 111.0
SYD3_k127_8800942_14 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000001179 115.0
SYD3_k127_8800942_15 Glycine zipper 2TM domain K04062 - - 0.000000000001305 70.0
SYD3_k127_8800942_16 SMART Transport-associated and nodulation region K04065 - - 0.0002443 51.0
SYD3_k127_8800942_2 PFAM EAL domain, GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009477 460.0
SYD3_k127_8800942_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009445 351.0
SYD3_k127_8800942_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004233 290.0
SYD3_k127_8800942_5 UreE urease accessory protein, C-terminal domain K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000001067 258.0
SYD3_k127_8800942_6 Mut7-C RNAse domain K09122 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005977 253.0
SYD3_k127_8800942_7 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000001606 249.0
SYD3_k127_8800942_8 NADPH quinone - - - 0.000000000000000000000000000000000000000000000000000000000000004723 231.0
SYD3_k127_8800942_9 Protein of unknown function (DUF421) - - - 0.00000000000000000000000000000000000000000000004485 175.0
SYD3_k127_8803121_0 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006947 357.0
SYD3_k127_8803121_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006386 298.0
SYD3_k127_8824162_0 FMN-dependent dehydrogenase K00101,K15054 - 1.1.2.3,1.1.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001593 274.0
SYD3_k127_8834613_0 Tyrosine recombinase XerD K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004222 427.0
SYD3_k127_8834613_1 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000000007531 150.0
SYD3_k127_8834613_2 COG0350 Methylated DNA-protein cysteine methyltransferase K00567 - 2.1.1.63 0.0000001712 53.0
SYD3_k127_8849348_0 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004464 564.0
SYD3_k127_8849348_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 307.0
SYD3_k127_8849348_2 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.00000000003635 64.0
SYD3_k127_8849348_3 Enoyl-CoA hydratase/isomerase K13766,K13779 - 4.2.1.18,4.2.1.57 0.0000000004895 61.0
SYD3_k127_8885323_0 transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006075 350.0
SYD3_k127_8885323_1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 323.0
SYD3_k127_8885323_2 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000006532 221.0
SYD3_k127_8885323_3 Domain of unknown function (DUF4340) - - - 0.0000000000000000000000000000000000000000000000000000009782 203.0
SYD3_k127_8885323_4 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000008921 154.0
SYD3_k127_891533_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 323.0
SYD3_k127_891533_1 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001674 270.0
SYD3_k127_891533_2 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000000001371 212.0
SYD3_k127_8924026_0 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007224 295.0
SYD3_k127_8924026_1 Trypsin-like peptidase domain - - - 0.000000000000000000000000000000000000000000000009087 186.0
SYD3_k127_8924026_2 TIGRFAM outer membrane autotransporter barrel domain protein - - - 0.0000000000000000000000000001179 129.0
SYD3_k127_8966732_0 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 352.0
SYD3_k127_8966732_1 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.0000000000000000000000000000000000000002285 156.0
SYD3_k127_8979687_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006857 509.0
SYD3_k127_8979687_1 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 364.0
SYD3_k127_8979687_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000002236 128.0
SYD3_k127_909418_0 UDP binding domain K02474 - - 7.561e-221 698.0
SYD3_k127_909418_1 general secretion pathway protein D K02453 - - 4.69e-208 668.0
SYD3_k127_909418_10 SMART AAA ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 348.0
SYD3_k127_909418_11 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008668 270.0
SYD3_k127_909418_12 Glutaredoxin K03599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008393 247.0
SYD3_k127_909418_13 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001132 260.0
SYD3_k127_909418_14 NUBPL iron-transfer P-loop NTPase K08252,K16692 - 2.7.10.1 0.000000000000000000000000000000000000000000000000000000000000000002412 237.0
SYD3_k127_909418_15 general secretion pathway protein K K02460 - - 0.000000000000000000000000000000000000000000000000000000000000000007679 242.0
SYD3_k127_909418_16 Type II secretion system (T2SS), protein G K02456 - - 0.00000000000000000000000000000000000000000000000000000000000006276 217.0
SYD3_k127_909418_17 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000008231 226.0
SYD3_k127_909418_18 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000000000000000000000000001123 227.0
SYD3_k127_909418_19 PFAM General secretion pathway L K02461 - - 0.00000000000000000000000000000000000000000000000000002552 207.0
SYD3_k127_909418_2 type II secretion system protein E K02454,K02652,K12276 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 627.0
SYD3_k127_909418_20 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000008258 193.0
SYD3_k127_909418_21 stringent starvation protein B K03600 - - 0.000000000000000000000000000000000000000002344 160.0
SYD3_k127_909418_23 General secretion pathway protein K02459 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0098776 - 0.0000000000000000000000000000002247 132.0
SYD3_k127_909418_24 General secretion pathway protein I K02458 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.0000000000000000000000005618 108.0
SYD3_k127_909418_25 COG2303 Choline dehydrogenase and related flavoproteins - - - 0.00000000000000000002809 105.0
SYD3_k127_909418_26 General secretion pathway K02462 - - 0.00000000000000612 87.0
SYD3_k127_909418_27 polysaccharide catabolic process K02388,K02396 - - 0.0000000000003871 83.0
SYD3_k127_909418_28 general secretion pathway protein K02457,K02650 - - 0.00000000006456 72.0
SYD3_k127_909418_29 Gram-negative-bacterium-type cell wall biogenesis - - - 0.00000004844 62.0
SYD3_k127_909418_3 epimerase dehydratase K02473,K08679 - 5.1.3.6,5.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008552 503.0
SYD3_k127_909418_30 Type II secretion system protein C K02452 - - 0.00005698 53.0
SYD3_k127_909418_31 Type II secretion system (T2SS), protein N K02463 - - 0.00008114 54.0
SYD3_k127_909418_32 amine dehydrogenase activity - - - 0.0002067 52.0
SYD3_k127_909418_4 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 512.0
SYD3_k127_909418_5 G-rich domain on putative tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 482.0
SYD3_k127_909418_6 Bacterial sugar transferase K21303 - 2.7.8.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 437.0
SYD3_k127_909418_7 cellulase activity K01178,K14645,K18546 - 3.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 371.0
SYD3_k127_909418_8 General secretion pathway protein F K02455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004479 360.0
SYD3_k127_909418_9 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 364.0
SYD3_k127_9100699_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 332.0
SYD3_k127_9100699_1 Belongs to the HpcH HpaI aldolase family - - - 0.00000000001629 70.0
SYD3_k127_9142158_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 3.781e-310 957.0
SYD3_k127_9142158_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 3.769e-197 619.0
SYD3_k127_9142158_2 PFAM Endonuclease exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004086 357.0
SYD3_k127_9142158_3 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005837 301.0
SYD3_k127_9142158_4 Nudix hydrolase K08310 - 3.6.1.67 0.00000000000000000000000000000000000000000000000000000000000001949 218.0
SYD3_k127_9142158_5 phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000002337 181.0
SYD3_k127_9142158_6 Guanyl-specific ribonuclease Sa - - - 0.0000000000000000000000000000000000002476 143.0
SYD3_k127_9142158_7 Flagellar Assembly Protein A K09749 - - 0.000000000000000000000000000000815 132.0
SYD3_k127_9142158_8 Putative regulatory protein - - - 0.00000000000000000000000001038 115.0
SYD3_k127_9142158_9 Barstar (barnase inhibitor) - - - 0.0000000000000000000007952 100.0
SYD3_k127_9173779_0 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008769 480.0
SYD3_k127_9173779_1 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000457 382.0
SYD3_k127_9173779_2 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001499 251.0
SYD3_k127_9173779_3 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000000000000000004014 210.0
SYD3_k127_9173779_4 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.00000000000000000000000000000000000000000000001797 180.0
SYD3_k127_9173779_5 Bacterial SH3 domain - - - 0.000000000000000000000000000000000003124 149.0
SYD3_k127_9173779_6 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000000000000001144 130.0
SYD3_k127_9173779_7 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.00000000000000000000001886 106.0
SYD3_k127_9173779_8 Rhodanese Homology Domain - - - 0.0005809 42.0
SYD3_k127_9285107_0 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 518.0
SYD3_k127_9285107_1 PFAM SMP-30 Gluconolaconase LRE-like region K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000005231 221.0
SYD3_k127_9291943_0 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 5.018e-230 721.0
SYD3_k127_9291943_1 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005281 312.0
SYD3_k127_9291943_2 SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001151 248.0
SYD3_k127_9291943_3 Belongs to the P(II) protein family K04751,K04752 - - 0.000000000000000000000000000000000001995 138.0
SYD3_k127_9291943_4 Membrane fusogenic activity K09806 - - 0.0000000000000000000001066 100.0
SYD3_k127_9291943_5 SMART Rhodanese domain protein - - - 0.0000000001539 62.0
SYD3_k127_9449308_0 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 430.0
SYD3_k127_9449308_1 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 290.0
SYD3_k127_9449308_2 Short-chain dehydrogenase reductase SDR K00059,K03793 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008667,GO:0009058,GO:0009237,GO:0009238,GO:0009239,GO:0009712,GO:0009713,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0016628,GO:0018130,GO:0018958,GO:0019184,GO:0019290,GO:0019438,GO:0019540,GO:0019748,GO:0022607,GO:0034641,GO:0042802,GO:0043043,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0046189,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.100,1.5.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002976 281.0
SYD3_k127_9449308_3 - - - - 0.000000000000000000000000000000000000000000000001776 181.0
SYD3_k127_9480112_0 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000225 271.0
SYD3_k127_9480112_1 PFAM Taurine catabolism dioxygenase TauD TfdA K03119 - 1.14.11.17 0.00000000000000000000000000000000000000003264 158.0
SYD3_k127_9480112_2 - - - - 0.0001172 44.0
SYD3_k127_9537195_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0 1135.0
SYD3_k127_9537195_1 acyl-CoA dehydrogenase K06445 - - 0.0 1026.0
SYD3_k127_9537195_10 TIGRFAM PAS sensor protein - - - 0.00000000000000000000000000000000000000000000000000246 194.0
SYD3_k127_9537195_11 Thioesterase K07107 - - 0.0000000000002091 73.0
SYD3_k127_9537195_12 Thioesterase-like superfamily K07107 - - 0.0000000003705 66.0
SYD3_k127_9537195_2 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 3.436e-282 874.0
SYD3_k127_9537195_3 AMP-dependent synthetase K01897 - 6.2.1.3 2.758e-240 756.0
SYD3_k127_9537195_4 Belongs to the thiolase family K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000237 597.0
SYD3_k127_9537195_5 AcnD-accessory protein PrpF K16514 - 5.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008674 426.0
SYD3_k127_9537195_6 squalene-associated FAD-dependent desaturase K21677 - 1.17.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 390.0
SYD3_k127_9537195_7 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 366.0
SYD3_k127_9537195_8 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005556 315.0
SYD3_k127_9537195_9 Thioesterase superfamily protein K10806 - - 0.00000000000000000000000000000000000000000000000000000245 193.0
SYD3_k127_9557841_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1328.0
SYD3_k127_9557841_1 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000071 564.0
SYD3_k127_9557841_11 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000007822 48.0
SYD3_k127_9557841_2 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 560.0
SYD3_k127_9557841_3 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008371 553.0
SYD3_k127_9557841_4 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009018 496.0
SYD3_k127_9557841_5 Prephenate dehydratase K01713,K14170 - 4.2.1.51,4.2.1.91,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005607 423.0
SYD3_k127_9557841_6 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 361.0
SYD3_k127_9557841_7 Prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 317.0
SYD3_k127_9557841_8 HAD-superfamily hydrolase, subfamily IA, variant 1 K22292 - 3.1.3.105 0.000000000000000000000000000000000000000000000000000000000000000000000001217 252.0
SYD3_k127_9557841_9 Belongs to the ompA family K03286 - - 0.00000000000000000000000002359 121.0
SYD3_k127_9559196_0 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009405 340.0
SYD3_k127_9559196_1 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005712 310.0
SYD3_k127_9559196_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001863 271.0
SYD3_k127_9559196_3 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000001516 67.0
SYD3_k127_9566073_0 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 369.0
SYD3_k127_9566073_1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001617 241.0
SYD3_k127_9584039_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1419.0
SYD3_k127_9584039_1 PFAM NADH Ubiquinone plastoquinone (complex I) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 287.0
SYD3_k127_9584039_2 DsrE/DsrF-like family K09004 - - 0.0000000000000000000000000000000000008248 145.0
SYD3_k127_9584039_3 Acylphosphatase K01512 - 3.6.1.7 0.000000000000000000000008768 104.0
SYD3_k127_9584039_4 peptidyl-tyrosine sulfation - - - 0.0000000000001282 79.0
SYD3_k127_9587311_0 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 1.815e-199 630.0
SYD3_k127_9587311_1 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007923 376.0
SYD3_k127_9587311_2 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008737 357.0
SYD3_k127_9587311_3 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 346.0
SYD3_k127_9587311_4 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008748 322.0
SYD3_k127_9587311_5 Deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004091 270.0
SYD3_k127_9587311_6 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) - - - 0.0000000000000000000000000000000000000000000000004106 180.0
SYD3_k127_9587311_7 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.0000000000000000000000000000000005465 132.0
SYD3_k127_9594386_0 ACT domain K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000237 277.0
SYD3_k127_9594386_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004463 269.0
SYD3_k127_9594386_2 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000004293 208.0
SYD3_k127_9607639_0 Iron-sulfur cluster-binding domain K06871 - - 2.978e-239 745.0
SYD3_k127_9607639_1 Carboxyl transferase domain - - - 4.173e-204 651.0
SYD3_k127_9607639_10 cheY-homologous receiver domain - - - 0.00000000000000000000000000009699 119.0
SYD3_k127_9607639_11 YMGG-like Gly-zipper - - - 0.000000000000000000000000008606 115.0
SYD3_k127_9607639_12 Thioesterase superfamily K18700 - 3.1.2.29 0.0000000000000000000000001922 109.0
SYD3_k127_9607639_13 Patatin-like phospholipase K07001 - - 0.000000000000000000008964 94.0
SYD3_k127_9607639_14 - - - - 0.000000000000000005186 88.0
SYD3_k127_9607639_2 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000531 557.0
SYD3_k127_9607639_3 CoA-binding domain protein K09181 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002701 544.0
SYD3_k127_9607639_4 Iron-containing alcohol dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002726 472.0
SYD3_k127_9607639_5 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004216 302.0
SYD3_k127_9607639_6 CoA binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005378 271.0
SYD3_k127_9607639_7 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000003465 215.0
SYD3_k127_9607639_8 COG2025 Electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000001505 144.0
SYD3_k127_9607639_9 - - - - 0.000000000000000000000000000000000002567 145.0
SYD3_k127_9607810_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 4.143e-200 632.0
SYD3_k127_9607810_1 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005472 456.0
SYD3_k127_9607810_2 - - - - 0.0000000000000000000000000000000000000000000000000000009719 199.0
SYD3_k127_9607810_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000000000000001491 168.0
SYD3_k127_9607810_4 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.000000000000000000000007836 102.0
SYD3_k127_9642343_0 PFAM Cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 533.0
SYD3_k127_9642343_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003059 279.0
SYD3_k127_9642343_2 - - - - 0.0000000000000000000000000000000000003059 144.0
SYD3_k127_9645735_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.0 1014.0
SYD3_k127_9645735_1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg - - - 8.414e-196 617.0
SYD3_k127_9651934_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004204 252.0
SYD3_k127_9651934_1 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000263 202.0
SYD3_k127_9672343_0 Predicted membrane protein (DUF2339) - - - 4.674e-277 882.0
SYD3_k127_9672343_1 Transmembrane secretion effector - - - 2.023e-255 802.0
SYD3_k127_9672343_2 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 549.0
SYD3_k127_9672343_3 Protein of unknown function (DUF3999) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001838 292.0
SYD3_k127_9680289_0 Carbon-nitrogen hydrolase K11206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006932 271.0
SYD3_k127_9680289_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000003439 173.0
SYD3_k127_9680289_2 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain K02488 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0042802,GO:0044424,GO:0044464 2.7.7.65 0.000000000000000000000000102 116.0
SYD3_k127_9681440_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004694 397.0
SYD3_k127_9681440_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004199 381.0
SYD3_k127_9681440_2 Two component transcriptional regulator, LuxR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009699 251.0
SYD3_k127_9681440_3 Pfam Response regulator receiver - - - 0.00000000000000000002361 95.0
SYD3_k127_9692038_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 5.077e-201 651.0
SYD3_k127_9692038_1 III protein, CoA-transferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 533.0
SYD3_k127_9692038_2 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 396.0
SYD3_k127_9692038_3 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K19189 - 1.14.13.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006992 372.0
SYD3_k127_9692038_4 acetylesterase activity K01046 - 3.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000001713 237.0
SYD3_k127_9692038_5 Carboxymethylenebutenolidase K01061 - 3.1.1.45 0.00000000000000000000000001321 119.0
SYD3_k127_9692038_6 acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.000003248 56.0
SYD3_k127_9695194_0 X-Pro dipeptidyl-peptidase domain protein K06978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 388.0
SYD3_k127_9695194_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000367 138.0
SYD3_k127_9695194_2 - - - - 0.0000001878 61.0
SYD3_k127_9695194_3 - - - - 0.0003443 44.0
SYD3_k127_9708058_0 Putative methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007569 555.0
SYD3_k127_9708058_1 Protein of unknown function (DUF1059) - - - 0.00000000000000000000000001641 109.0
SYD3_k127_9708058_2 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000824 64.0
SYD3_k127_9709398_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004424 492.0
SYD3_k127_9709398_1 Sulfatase K01133 - 3.1.6.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000005073 268.0
SYD3_k127_9709398_2 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000000000001151 279.0
SYD3_k127_9709398_3 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000000000000000552 173.0
SYD3_k127_9709398_4 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000003253 177.0
SYD3_k127_9717662_0 ribonuclease II K01147 - 3.1.13.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 518.0
SYD3_k127_9731980_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 582.0
SYD3_k127_9731980_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 530.0
SYD3_k127_9731980_10 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000007512 55.0
SYD3_k127_9731980_2 PFAM ABC transporter related K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 437.0
SYD3_k127_9731980_3 binding-protein-dependent transport systems inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 415.0
SYD3_k127_9731980_4 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 393.0
SYD3_k127_9731980_5 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008268 297.0
SYD3_k127_9731980_6 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004575 288.0
SYD3_k127_9731980_7 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000000000000000000000006003 162.0
SYD3_k127_9732545_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1767.0
SYD3_k127_9732545_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0 1074.0
SYD3_k127_9732545_10 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000000000000000000000000000000000002405 183.0
SYD3_k127_9732545_11 Preprotein translocase SecG subunit K03075 - - 0.0000000000000000000000000000003381 126.0
SYD3_k127_9732545_12 CRS1_YhbY K07574 - - 0.0000000000000000000000000001823 119.0
SYD3_k127_9732545_2 Fumarate reductase flavoprotein C-term - - - 9.21e-251 786.0
SYD3_k127_9732545_3 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 1.344e-195 618.0
SYD3_k127_9732545_4 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009222 586.0
SYD3_k127_9732545_5 Pterin binding enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009188 338.0
SYD3_k127_9732545_6 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005278 323.0
SYD3_k127_9732545_7 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005974 256.0
SYD3_k127_9732545_8 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000000005812 243.0
SYD3_k127_9732545_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000003164 198.0
SYD3_k127_9733458_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 532.0
SYD3_k127_9733458_1 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006549 493.0
SYD3_k127_9733458_10 - - - - 0.000000000000000001281 87.0
SYD3_k127_9733458_11 - - - - 0.000000000000000009795 89.0
SYD3_k127_9733458_2 COG0436 Aspartate tyrosine aromatic aminotransferase K14287 - 2.6.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004048 478.0
SYD3_k127_9733458_3 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 357.0
SYD3_k127_9733458_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 338.0
SYD3_k127_9733458_5 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 308.0
SYD3_k127_9733458_6 PFAM Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003359 274.0
SYD3_k127_9733458_7 short-chain dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005156 253.0
SYD3_k127_9733458_8 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000004424 123.0
SYD3_k127_9733458_9 - - - - 0.0000000000000000001452 100.0
SYD3_k127_9736214_0 TIGRFAM ATP-dependent Clp protease ATP-binding subunit clpA K03694 - - 1.62e-260 809.0
SYD3_k127_9736214_1 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000000000000007764 167.0
SYD3_k127_9736214_2 Cold shock K03704 - - 0.00000000000000000000000000000000002338 137.0
SYD3_k127_9743074_0 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000005294 219.0
SYD3_k127_9743074_1 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000003168 162.0
SYD3_k127_9759225_0 Putative FMN-binding domain K07734 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005512 280.0
SYD3_k127_9759225_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000001564 154.0
SYD3_k127_9760431_0 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 406.0
SYD3_k127_9760431_1 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000002821 224.0
SYD3_k127_9760431_2 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000096 221.0
SYD3_k127_9760431_3 - - - - 0.00000000000000000000000000000004972 131.0
SYD3_k127_9760431_4 metallophosphoesterase - - - 0.0006317 43.0
SYD3_k127_9764955_0 Bifunctional enoyl-CoA hydratase phosphate acetyltransferase K00625 - 2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 557.0
SYD3_k127_9764955_1 Nicotinate phosphoribosyltransferase (NAPRTase) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 562.0
SYD3_k127_9764955_2 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 424.0
SYD3_k127_9764955_3 PFAM MgtC SapB transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 330.0
SYD3_k127_9764955_4 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 310.0
SYD3_k127_9764955_5 S-Adenosylmethionine synthetase K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 309.0
SYD3_k127_9764955_6 Isochorismatase family K08281 - 3.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000007417 242.0
SYD3_k127_9787842_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1120.0
SYD3_k127_9787842_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 3.805e-222 694.0
SYD3_k127_9787842_10 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000000309 153.0
SYD3_k127_9787842_11 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000000000004447 148.0
SYD3_k127_9787842_12 Belongs to the UPF0125 (RnfH) family K09801 - - 0.0000000000000000000002537 102.0
SYD3_k127_9787842_13 - - - - 0.00000005937 54.0
SYD3_k127_9787842_14 - - - - 0.0000002078 56.0
SYD3_k127_9787842_15 Domain of unknown function (DUF4124) - - - 0.0006797 48.0
SYD3_k127_9787842_2 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 414.0
SYD3_k127_9787842_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 306.0
SYD3_k127_9787842_4 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 302.0
SYD3_k127_9787842_5 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007948 293.0
SYD3_k127_9787842_6 SmpB protein K03664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006803 250.0
SYD3_k127_9787842_7 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000000000000000000000000000000000001388 234.0
SYD3_k127_9787842_8 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000002293 196.0
SYD3_k127_9787842_9 NfeD-like C-terminal, partner-binding K07340 - - 0.0000000000000000000000000000000000000000003643 162.0
SYD3_k127_9788141_0 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005075 445.0
SYD3_k127_9788141_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 299.0
SYD3_k127_9788141_2 - - - - 0.00000000000000000000000000000000000000000000001128 185.0
SYD3_k127_9788141_3 Prolyl oligopeptidase family K06889 - - 0.0000000000000000000000000000000000000000003569 166.0
SYD3_k127_9788141_4 PFAM conserved - - - 0.0000000000000000000000000004881 116.0
SYD3_k127_9793912_0 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 344.0
SYD3_k127_9793912_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000005149 225.0
SYD3_k127_9793912_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000386 153.0
SYD3_k127_9793912_3 COG0524 Sugar kinases, ribokinase family K00856 - 2.7.1.20 0.000000000000000000000000000001135 122.0
SYD3_k127_9793912_4 general secretion pathway protein - - - 0.000003287 59.0
SYD3_k127_9794092_0 coagulation factor 5 8 type - - - 0.0 1096.0
SYD3_k127_9794092_1 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03669 GO:0005575,GO:0016020 - 0.0 1021.0
SYD3_k127_9794092_10 Belongs to the ABC transporter superfamily K10112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007145 465.0
SYD3_k127_9794092_11 ABC-type sugar transport systems, permease components K02025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 441.0
SYD3_k127_9794092_12 ABC-type sugar transport system, permease component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000977 389.0
SYD3_k127_9794092_13 Transglycosylase SLT domain K08305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525 346.0
SYD3_k127_9794092_14 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 332.0
SYD3_k127_9794092_15 Catalyzes the decarboxylation of oxaloacetate into pyruvate. Seems to play a role in maintaining cellular concentrations of bicarbonate and pyruvate K01003 - 4.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 288.0
SYD3_k127_9794092_16 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002737 263.0
SYD3_k127_9794092_17 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000003536 225.0
SYD3_k127_9794092_18 Short-chain dehydrogenase reductase sdr - - - 0.00000000000000000000000000000000000000000000000000000000000003596 222.0
SYD3_k127_9794092_19 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000001705 225.0
SYD3_k127_9794092_2 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03670 - - 5.857e-250 780.0
SYD3_k127_9794092_20 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone - - - 0.00000000000002752 74.0
SYD3_k127_9794092_3 COG2723 Beta-glucosidase 6-phospho-beta-glucosidase beta- galactosidase K05350 - 3.2.1.21 2.808e-228 713.0
SYD3_k127_9794092_4 COG1178 ABC-type Fe3 transport system, permease component K02011 - - 2.21e-206 656.0
SYD3_k127_9794092_5 Protein conserved in bacteria - - - 6.078e-205 650.0
SYD3_k127_9794092_6 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03670 - - 1.079e-198 632.0
SYD3_k127_9794092_7 ABC transporter substrate-binding protein K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 536.0
SYD3_k127_9794092_8 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 505.0
SYD3_k127_9794092_9 ABC-type Fe3 transport system, periplasmic component K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 491.0
SYD3_k127_9807727_0 Peptidase M1, membrane alanine aminopeptidase - - - 6.633e-221 706.0
SYD3_k127_9807727_1 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.0000000005209 61.0
SYD3_k127_9818540_0 Cation transporter/ATPase, N-terminus - - - 0.0 1086.0
SYD3_k127_9818540_1 O-acetylhomoserine K01740 - 2.5.1.49 1.867e-199 625.0
SYD3_k127_9818540_2 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000575 588.0
SYD3_k127_9818540_3 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004763 509.0
SYD3_k127_9818540_4 PFAM Transketolase central region K00162 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 485.0
SYD3_k127_9818540_5 e1 component (alpha subunit) K00161 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000963 443.0
SYD3_k127_9818540_6 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 411.0
SYD3_k127_9818540_7 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009926 400.0
SYD3_k127_9828652_0 Proton-conducting membrane transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 568.0
SYD3_k127_9828652_1 Na H antiporter, MnhB K05566 - - 0.000000000000000000000000000000000000000000000000000000000000000978 226.0
SYD3_k127_9828652_2 Na H antiporter, MnhB K05566 - - 0.00000000000000000000000000000000000000000000000000000000004738 208.0
SYD3_k127_9828652_3 COG1863 Multisubunit Na H antiporter MnhE subunit K05569 - - 0.000000000000000000000000000000000000000000006443 170.0
SYD3_k127_9828652_4 COG1006 Multisubunit Na H antiporter, MnhC subunit K05567 - - 0.0000000000000000000000000000000000000000003307 167.0
SYD3_k127_9828652_5 Proton-conducting membrane transporter K00341,K05568 - 1.6.5.3 0.000000000000000000000000000000000000001446 154.0
SYD3_k127_9828652_6 monovalent cation:proton antiporter activity K05571 - - 0.00000000000000000000000000000001775 130.0
SYD3_k127_9828652_7 Multiple resistance and pH regulation protein F K05570 - - 0.0000000000000000000000000000008052 123.0
SYD3_k127_9828652_8 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000001273 109.0
SYD3_k127_9828802_0 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I - - - 2.876e-242 770.0
SYD3_k127_9828802_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) - - - 1.753e-197 622.0
SYD3_k127_9828802_2 LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 556.0
SYD3_k127_9828802_3 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007951 440.0
SYD3_k127_9828802_4 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009404 340.0
SYD3_k127_9828802_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008713 283.0
SYD3_k127_9828802_6 Competence-damaged protein - - - 0.000000000000000000000000000000000000000000000002928 178.0
SYD3_k127_9828802_7 NIPSNAP - - - 0.00000000000000000000000000000000000000003415 160.0
SYD3_k127_9828802_8 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000001504 118.0
SYD3_k127_9828802_9 Carboxymuconolactone decarboxylase family - - - 0.0000000000000001005 86.0
SYD3_k127_9840828_0 PFAM peptidase M3A and M3B, thimet oligopeptidase F K01414 - 3.4.24.70 1.533e-261 817.0
SYD3_k127_9840828_1 dihydroorotase K01465 - 3.5.2.3 2.501e-197 622.0
SYD3_k127_9840828_2 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 518.0
SYD3_k127_9840828_3 Phosphoribosyl transferase domain K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000001186 220.0
SYD3_k127_9840828_4 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000007789 49.0
SYD3_k127_9845820_0 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 425.0
SYD3_k127_9845820_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007006 344.0
SYD3_k127_9845820_2 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000001366 222.0
SYD3_k127_9853787_0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 371.0
SYD3_k127_9853787_1 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006536 356.0
SYD3_k127_9853787_10 Belongs to the peptidase M24B family K01271 - 3.4.13.9 0.000000000002795 79.0
SYD3_k127_9853787_2 Belongs to the DapA family K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004189 328.0
SYD3_k127_9853787_3 ABC transporter K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 312.0
SYD3_k127_9853787_4 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K03119 - 1.14.11.17 0.000000000000000000000000000000000000000000000000000000000000000000006068 239.0
SYD3_k127_9853787_5 alpha beta - - - 0.000000000000000000000000000000000000000000000000000000000000000001437 242.0
SYD3_k127_9853787_6 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000007909 221.0
SYD3_k127_9853787_7 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000001486 225.0
SYD3_k127_9853787_8 binding-protein-dependent transport systems inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000003359 205.0
SYD3_k127_9853787_9 ornithine cyclodeaminase K01750,K19244 - 1.4.1.1,4.3.1.12 0.00000000000000000000000000000004165 138.0
SYD3_k127_9854529_0 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 519.0
SYD3_k127_9854529_1 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K01841,K03417 - 4.1.3.30,5.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006668 448.0
SYD3_k127_9854529_2 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003918 273.0
SYD3_k127_9854529_3 helix_turn_helix isocitrate lyase regulation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001122 262.0
SYD3_k127_9854529_4 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000003313 214.0
SYD3_k127_9854529_5 Alcohol dehydrogenase zinc-binding domain protein K13953,K18382 - 1.1.1.1 0.0000000000000000000000000000000000000000000000005764 188.0
SYD3_k127_9858774_0 PFAM Peptidase M16 K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 576.0
SYD3_k127_9858774_1 PFAM Peptidase M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 509.0
SYD3_k127_9858774_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005959 426.0
SYD3_k127_9858774_3 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001935 265.0
SYD3_k127_9858774_4 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000000000007684 194.0
SYD3_k127_9858774_5 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000001038 88.0
SYD3_k127_9860503_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003047 608.0
SYD3_k127_98623_0 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 390.0
SYD3_k127_98623_1 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000009154 226.0
SYD3_k127_98623_2 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000001344 232.0
SYD3_k127_98623_3 Cytochrome B561 K12262 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000003651 201.0
SYD3_k127_98623_4 PFAM glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000000001319 143.0
SYD3_k127_9865024_0 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 478.0
SYD3_k127_9865024_1 Phosphate transport system permease protein K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004449 458.0
SYD3_k127_9865024_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 428.0
SYD3_k127_9865024_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000278 259.0
SYD3_k127_9865024_4 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000788 144.0
SYD3_k127_9867150_0 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008764 311.0
SYD3_k127_9867150_1 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000001755 235.0
SYD3_k127_9900588_0 DNA-binding domain of Proline dehydrogenase K13821 - 1.2.1.88,1.5.5.2 5.457e-296 938.0
SYD3_k127_9900588_1 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 359.0
SYD3_k127_9900588_2 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002412 272.0
SYD3_k127_9900588_3 SMP-30 Gluconolaconase K14274 - - 0.00000000000000000000000000000000000000000000000000000000000000000004254 244.0
SYD3_k127_9900588_4 PFAM aminotransferase class V - - - 0.00000000000000000000000003979 117.0
SYD3_k127_9930271_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 7.792e-207 653.0
SYD3_k127_9930271_1 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 422.0
SYD3_k127_9930271_2 Nitrile hydratase, alpha chain K01721 - 4.2.1.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004552 316.0
SYD3_k127_9930271_3 NHase catalyzes the hydration of various nitrile compounds to the corresponding amides K20807 - 4.2.1.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 304.0
SYD3_k127_9930271_4 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.000000000000000000000000000000000000000000000000000000000000000000006849 241.0
SYD3_k127_9930271_5 Ketopantoate reductase PanE/ApbA C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000943 233.0
SYD3_k127_9930271_6 Nitrile hydratase beta subunit - - - 0.000000000000000000000000000000000000000000000000000000000004901 210.0
SYD3_k127_9945767_0 2 iron, 2 sulfur cluster binding K00266,K00528,K02823 - 1.18.1.2,1.19.1.1,1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 465.0
SYD3_k127_9945767_1 C-terminal domain of 1-Cys peroxiredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 386.0
SYD3_k127_9945767_2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 339.0
SYD3_k127_9945767_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006041 289.0
SYD3_k127_9945767_4 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000958 265.0
SYD3_k127_9945767_5 alcohol dehydrogenase K08322 - 1.1.1.380 0.000000000000000000000000000000000000000000000000000000000000003421 230.0
SYD3_k127_9945767_6 PFAM conserved - - - 0.000000000000000000000000000001731 128.0
SYD3_k127_9945767_7 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.00000000000000000000002017 106.0
SYD3_k127_9945767_8 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000003365 95.0
SYD3_k127_9945767_9 - - - - 0.0000000000126 67.0
SYD3_k127_9956395_0 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000008692 182.0
SYD3_k127_9956395_1 C-terminal, D2-small domain, of ClpB protein K03544 - - 0.0000000000000000000000000000000007746 132.0
SYD3_k127_9956395_2 PFAM Asp Glu hydantoin racemase K01799 - 5.2.1.1 0.0000000183 65.0
SYD3_k127_9959343_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 4.977e-230 723.0
SYD3_k127_9959343_1 TonB dependent receptor K02014,K16089 - - 3.398e-198 636.0
SYD3_k127_9959343_10 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001651 279.0
SYD3_k127_9959343_11 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006546 278.0
SYD3_k127_9959343_12 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002294 243.0
SYD3_k127_9959343_13 DUF218 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000028 254.0
SYD3_k127_9959343_14 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000000000000005059 215.0
SYD3_k127_9959343_15 OsmC-like protein K07397 - - 0.000000000000000000000000000000000000000000000000000000000006915 216.0
SYD3_k127_9959343_16 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000002925 219.0
SYD3_k127_9959343_17 Required for insertion of 4Fe-4S clusters K15724 - - 0.0000000000000000000000000000000000000000000000000000000001074 205.0
SYD3_k127_9959343_18 PFAM ApaG domain protein K06195 - - 0.0000000000000000000000000000000000000000000000000000002106 196.0
SYD3_k127_9959343_19 - - - - 0.0000000000000000000000000000000000000000000000002919 185.0
SYD3_k127_9959343_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 9.979e-195 614.0
SYD3_k127_9959343_20 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000000000001411 175.0
SYD3_k127_9959343_22 AIR synthase related protein, N-terminal domain K01008 - 2.7.9.3 0.0000000000000000000000000003812 115.0
SYD3_k127_9959343_23 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000001634 57.0
SYD3_k127_9959343_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006088 544.0
SYD3_k127_9959343_4 peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 483.0
SYD3_k127_9959343_5 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005913 486.0
SYD3_k127_9959343_6 membrane-bound lytic murein transglycosylase K08304 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 477.0
SYD3_k127_9959343_7 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 352.0
SYD3_k127_9959343_8 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 322.0
SYD3_k127_9959343_9 Peptidase C26 K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 308.0
SYD3_k127_9963354_0 Response regulator receiver K07675 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 353.0
SYD3_k127_9963354_1 Two component transcriptional regulator, LuxR family - - - 0.000000000000000000000000000000000000000000000000000003089 196.0
SYD3_k127_9979344_0 Aminotransferase K14261 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005387 541.0
SYD3_k127_9979344_1 GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 357.0
SYD3_k127_9979344_2 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000000000009041 131.0
SYD3_k127_9995113_0 Major facilitator Superfamily K05820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003 413.0
SYD3_k127_9996937_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 330.0
SYD3_k127_9996937_1 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000002775 181.0
SYD3_k127_9996937_2 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000003562 111.0
SYD3_k127_9996937_3 carboxymuconolactone decarboxylase - - - 0.0000000000000005324 83.0