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Overview

ID MAG03802
Name SYD3_bin.40
Sample SMP0096
Taxonomy
Kingdom Bacteria
Phylum Bacteroidota
Class Bacteroidia
Order Chitinophagales
Family Saprospiraceae
Genus Opimibacter
Species
Assembly information
Completeness (%) 87.1
Contamination (%) 2.41
GC content (%) 47.0
N50 (bp) 12,407
Genome size (bp) 3,488,716

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2778

Gene name Description KEGG GOs EC E-value Score Sequence
SYD3_k127_10026089_0 PFAM Cys Met metabolism K01739,K01758,K01760 - 2.5.1.48,4.4.1.1,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009506 527.0
SYD3_k127_10026089_1 Phage integrase, N-terminal SAM-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 315.0
SYD3_k127_10026089_2 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000001297 233.0
SYD3_k127_10026089_3 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000001185 123.0
SYD3_k127_10026089_4 ABC transporter K18890 - - 0.00001795 48.0
SYD3_k127_10027986_0 Pfam C-terminal domain of CHU protein family - - - 2.263e-196 646.0
SYD3_k127_10056742_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 6.008e-261 811.0
SYD3_k127_10056742_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 9.594e-258 801.0
SYD3_k127_10056742_10 Bax inhibitor 1 like - - - 0.000003452 52.0
SYD3_k127_10056742_2 2-methylthioadenine synthetase K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000424 568.0
SYD3_k127_10056742_3 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003754 344.0
SYD3_k127_10056742_4 Pfam Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004431 327.0
SYD3_k127_10056742_5 Two component transcriptional regulator, winged helix family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000176 280.0
SYD3_k127_10056742_6 PFAM PspC domain K03973 - - 0.00000000000000000000000000000000000000000000000000004747 199.0
SYD3_k127_10056742_7 transcriptional regulator PadR family K10947 - - 0.00000000000000000000000000000000006703 138.0
SYD3_k127_10056742_8 ATP synthase K02114 - - 0.000000000000000002917 86.0
SYD3_k127_10056742_9 - - - - 0.000003079 51.0
SYD3_k127_10113558_0 Sugar nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009042 443.0
SYD3_k127_10113558_1 Bifunctional phosphoglucose phosphomannose isomerase K15916 - 5.3.1.8,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 338.0
SYD3_k127_10113558_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 328.0
SYD3_k127_10113558_3 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009684 305.0
SYD3_k127_10113558_4 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000587 301.0
SYD3_k127_10113558_5 Spermidine synthase K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000002304 191.0
SYD3_k127_10113558_6 Ribosomal protein L31 K02909 - - 0.000000000000000000000000000000000001248 141.0
SYD3_k127_10113558_7 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000000000006272 123.0
SYD3_k127_10113558_8 Tetratricopeptide repeat - - - 0.0006047 52.0
SYD3_k127_10114358_0 TonB dependent receptor K16087 - - 1.599e-294 916.0
SYD3_k127_10114358_1 Two component regulator three Y - - - 5.106e-194 623.0
SYD3_k127_10114358_2 Two component regulator three Y - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 419.0
SYD3_k127_10114358_3 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003736 263.0
SYD3_k127_10114358_4 Chaperone of endosialidase - - - 0.0000000001736 72.0
SYD3_k127_1012497_0 peptidase M1 - - - 3.195e-219 692.0
SYD3_k127_1012497_1 PFAM Carbamoyltransferase K00612 - - 6.843e-210 666.0
SYD3_k127_1012497_10 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000002448 213.0
SYD3_k127_1012497_11 chlorophyll binding K03640 - - 0.00000000000000000000000000000000000000000000000000000001275 219.0
SYD3_k127_1012497_12 DNA alkylation repair enzyme - - - 0.0000000000000000000000000000000000000000000000116 179.0
SYD3_k127_1012497_13 Vibrio cholerae RfbT protein - - - 0.0000000000000000000000000000000000000000001061 170.0
SYD3_k127_1012497_14 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000000002156 141.0
SYD3_k127_1012497_15 PFAM KWG Leptospira - - - 0.0000000000000000000000000000000417 135.0
SYD3_k127_1012497_16 Helix-turn-helix domain - - - 0.000000000000000000000007041 104.0
SYD3_k127_1012497_17 Phage derived protein Gp49-like (DUF891) - - - 0.0000000000000000000001827 99.0
SYD3_k127_1012497_2 Oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006133 535.0
SYD3_k127_1012497_3 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009596 455.0
SYD3_k127_1012497_4 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 451.0
SYD3_k127_1012497_5 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003475 381.0
SYD3_k127_1012497_6 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 355.0
SYD3_k127_1012497_7 metallopeptidase activity K01179,K03768,K08738 - 3.2.1.4,5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004298 353.0
SYD3_k127_1012497_8 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000001118 265.0
SYD3_k127_1012497_9 Protein of unknown function (DUF1572) - - - 0.000000000000000000000000000000000000000000000000000000000000002992 222.0
SYD3_k127_10169825_0 Bacterial membrane protein YfhO - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005424 307.0
SYD3_k127_10169825_1 PFAM Glycosyl transferase, group 1 - GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.0000000000000000000000000000000000000000000000000000000000000000000001244 252.0
SYD3_k127_10169825_2 Sulfotransferase family - - - 0.00000000009536 72.0
SYD3_k127_10169825_3 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.0000000007555 71.0
SYD3_k127_10174675_0 Superfamily I DNA and RNA K10742 - 3.6.4.12 9.345e-206 679.0
SYD3_k127_10174675_1 WG containing repeat - - - 0.00000000000000000000000000000000000000000000000000000000000005126 228.0
SYD3_k127_10174675_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K06991 - - 0.00000000000000000000000000000000000000000000000000000000000005628 215.0
SYD3_k127_10174675_3 START domain - - - 0.00000000000000000000195 102.0
SYD3_k127_10174675_4 Rhodanese Homology Domain - - - 0.0000000000000001366 85.0
SYD3_k127_10174675_5 protein with protein kinase and helix-hairpin-helix DNA-binding domains - - - 0.00002703 56.0
SYD3_k127_10369817_0 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 564.0
SYD3_k127_10369817_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000007625 242.0
SYD3_k127_10369817_2 - - - - 0.000000000000000000000000000000000000000006227 160.0
SYD3_k127_10369817_3 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0004317 43.0
SYD3_k127_10375013_0 Fungalysin metallopeptidase (M36) - - - 0.0 1408.0
SYD3_k127_10375013_1 luciferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004548 487.0
SYD3_k127_10375013_2 AMP-binding enzyme K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000218 182.0
SYD3_k127_10375013_3 PFAM Biopolymer transport protein ExbD TolR - - - 0.000000000000000000000000000000000000000003847 160.0
SYD3_k127_10375013_4 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000001161 141.0
SYD3_k127_10380814_0 Fe-S oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009459 541.0
SYD3_k127_10380814_1 Belongs to the BshC family K22136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 428.0
SYD3_k127_10380814_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002755 403.0
SYD3_k127_10380814_3 Fe-S oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 383.0
SYD3_k127_10380814_4 PFAM PKD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002122 289.0
SYD3_k127_10380814_5 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000006205 225.0
SYD3_k127_10380814_6 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000002051 190.0
SYD3_k127_1041760_0 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006015 551.0
SYD3_k127_1041760_1 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 443.0
SYD3_k127_1041760_2 PFAM ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006778 428.0
SYD3_k127_1041760_3 protein conserved in bacteria (DUF2179) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 356.0
SYD3_k127_1041760_4 Psort location CytoplasmicMembrane, score 10.00 K12343 - 1.3.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 295.0
SYD3_k127_1041760_5 SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003041 265.0
SYD3_k127_1041760_6 NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000001713 264.0
SYD3_k127_1041760_7 PFAM Receptor L domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005023 270.0
SYD3_k127_1041760_8 GPI-anchored cell wall organization protein Ecm33 - GO:0000003,GO:0000322,GO:0000323,GO:0000324,GO:0003006,GO:0005575,GO:0005618,GO:0005619,GO:0005622,GO:0005623,GO:0005628,GO:0005737,GO:0005739,GO:0005773,GO:0005783,GO:0005886,GO:0007049,GO:0007154,GO:0007165,GO:0008150,GO:0009272,GO:0009277,GO:0009653,GO:0009986,GO:0009987,GO:0010927,GO:0012505,GO:0016020,GO:0016043,GO:0019953,GO:0022402,GO:0022413,GO:0022414,GO:0022607,GO:0023052,GO:0030154,GO:0030312,GO:0030435,GO:0030437,GO:0030476,GO:0031160,GO:0031505,GO:0032502,GO:0032505,GO:0032989,GO:0034293,GO:0035556,GO:0042244,GO:0042546,GO:0042763,GO:0042764,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043934,GO:0043935,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045229,GO:0048468,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051321,GO:0051704,GO:0051716,GO:0065007,GO:0070590,GO:0070591,GO:0070726,GO:0071554,GO:0071555,GO:0071840,GO:0071852,GO:0071940,GO:0071944,GO:1903046 - 0.0001124 55.0
SYD3_k127_1043795_0 TonB-dependent receptor plug domain K02014 - - 3.927e-302 953.0
SYD3_k127_1043795_1 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007249 594.0
SYD3_k127_1043795_2 TIGRFAM N-terminal double-transmembrane domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 559.0
SYD3_k127_1043795_3 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 372.0
SYD3_k127_1043795_4 Dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002703 376.0
SYD3_k127_1043795_5 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535 327.0
SYD3_k127_1043795_6 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000953 218.0
SYD3_k127_1043795_7 Protein of unknown function (DUF4199) - - - 0.0000000000262 71.0
SYD3_k127_10444030_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008804 482.0
SYD3_k127_10444030_1 flavin reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 347.0
SYD3_k127_10444030_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000007323 183.0
SYD3_k127_10444030_3 Domain of unknown function (DUF4369) - - - 0.000000000000000000000000000000000000000000004017 169.0
SYD3_k127_10444030_4 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000002232 160.0
SYD3_k127_10444030_5 Gliding motility-associated lipoprotein, GldH - GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006040,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0017144,GO:0040011,GO:0042737,GO:0043170,GO:0044237,GO:0044248,GO:0046348,GO:0048870,GO:0051179,GO:0051674,GO:0071704,GO:0071976,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.0000004748 56.0
SYD3_k127_10450307_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 4.339e-285 891.0
SYD3_k127_10450307_1 ABC transporter K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006258 572.0
SYD3_k127_10450307_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 359.0
SYD3_k127_10450307_3 LytTr DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004031 334.0
SYD3_k127_10450307_4 Acyl transferase domain K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009582 330.0
SYD3_k127_10450307_5 PFAM GTP cyclohydrolase I Nitrile oxidoreductase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 300.0
SYD3_k127_10450307_6 Putative Flp pilus-assembly TadE/G-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002942 289.0
SYD3_k127_10450307_7 acr, cog1678 K07735 - - 0.000000000000000000000000000000000000000000000000000000000000000002486 230.0
SYD3_k127_10466545_0 amino acid peptide transporter K03305 - - 1.916e-208 658.0
SYD3_k127_10466545_1 M42 glutamyl aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 479.0
SYD3_k127_10466545_2 POT family K03305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009323 476.0
SYD3_k127_10466545_3 PFAM Aminotransferase class I and II K14287 - 2.6.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008655 439.0
SYD3_k127_10466545_4 phenazine biosynthesis protein PhzF - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 342.0
SYD3_k127_10466545_5 phenazine biosynthesis protein PhzF - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 342.0
SYD3_k127_10466545_6 phenazine biosynthesis protein PhzF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 329.0
SYD3_k127_10466545_7 phenazine biosynthesis protein PhzF - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008154 323.0
SYD3_k127_10466545_8 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000000000000000000000000000000005843 243.0
SYD3_k127_10466545_9 PFAM Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000001302 111.0
SYD3_k127_10520022_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005527 569.0
SYD3_k127_10520022_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000648 431.0
SYD3_k127_10520022_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 320.0
SYD3_k127_10520022_3 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003325 311.0
SYD3_k127_10520022_4 - - - - 0.000000000001931 74.0
SYD3_k127_10520022_5 - - - - 0.000000000004133 79.0
SYD3_k127_10520022_6 Glucose / Sorbosone dehydrogenase - - - 0.0001506 51.0
SYD3_k127_10521715_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 2.264e-229 716.0
SYD3_k127_10521715_1 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000226 141.0
SYD3_k127_10521715_2 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000000000001248 123.0
SYD3_k127_10521715_3 Carboxypeptidase regulatory-like domain - - - 0.00000000000000001157 86.0
SYD3_k127_10521715_5 TonB family domain protein - - - 0.00006189 54.0
SYD3_k127_10554743_0 Fumarase C C-terminus K01744 - 4.3.1.1 4.215e-252 783.0
SYD3_k127_10554743_1 PFAM Tetratricopeptide - - - 9.324e-225 732.0
SYD3_k127_10554743_10 GTP-binding protein TypA K06207 - - 0.0000000000000000000000000000000000000000000000000000000000000001864 223.0
SYD3_k127_10554743_11 PFAM Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000004951 227.0
SYD3_k127_10554743_12 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000000000000000000000003549 230.0
SYD3_k127_10554743_13 carbonate dehydratase activity K01674 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000002229 208.0
SYD3_k127_10554743_14 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000000000000000000001234 188.0
SYD3_k127_10554743_15 Protein of unknown function, DUF481 - - - 0.00000000000000000000000000000000000000000000001585 183.0
SYD3_k127_10554743_16 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000001999 169.0
SYD3_k127_10554743_18 helix_turn_helix, Lux Regulon - - - 0.000000007617 62.0
SYD3_k127_10554743_2 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 595.0
SYD3_k127_10554743_3 COG NOG10142 non supervised orthologous group - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 544.0
SYD3_k127_10554743_4 - K07221 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 546.0
SYD3_k127_10554743_5 Glutaminase K01425 GO:0003674,GO:0003824,GO:0004359,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006543,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009084,GO:0009987,GO:0016053,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 3.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 519.0
SYD3_k127_10554743_6 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 445.0
SYD3_k127_10554743_7 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 440.0
SYD3_k127_10554743_8 Belongs to the asparaginase 1 family K01424 - 3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 407.0
SYD3_k127_10554743_9 Psort location OuterMembrane, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005329 278.0
SYD3_k127_10556147_0 oxidoreductase activity - - - 0.000000000000000000000000000000000000000001562 179.0
SYD3_k127_10556147_1 ORF6N domain - - - 0.0000000000000000000000000000000000000007125 155.0
SYD3_k127_10556147_2 aminopeptidase activity - - - 0.0000000000001269 83.0
SYD3_k127_10556147_3 cell adhesion involved in biofilm formation - - - 0.000002855 59.0
SYD3_k127_10559313_0 Amidohydrolase family - - - 1.155e-198 627.0
SYD3_k127_10559313_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000002307 218.0
SYD3_k127_10559313_2 Amidohydrolase family - - - 0.000000000000000000000000000002568 123.0
SYD3_k127_105671_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 1.465e-202 643.0
SYD3_k127_105671_1 Penicillin-binding Protein K05367 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004758 487.0
SYD3_k127_105671_2 thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007879 271.0
SYD3_k127_105671_3 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003844 257.0
SYD3_k127_105671_4 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000002836 189.0
SYD3_k127_105671_5 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000002283 187.0
SYD3_k127_105671_6 Putative auto-transporter adhesin, head GIN domain - - - 0.0000000000000000000000000000000000000002104 159.0
SYD3_k127_105671_7 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.0000000000000000000000000000000000781 135.0
SYD3_k127_10612822_0 ig-like, plexins, transcription factors - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006107 393.0
SYD3_k127_10612822_1 - - - - 0.00000000000000000000003479 112.0
SYD3_k127_10612822_2 Amidohydrolase K07045 - - 0.000000000000000001067 93.0
SYD3_k127_10612822_3 Hep Hag repeat protein - - - 0.000000000000003669 91.0
SYD3_k127_10612822_4 Leucine Rich Repeat - - - 0.00004708 49.0
SYD3_k127_10615383_0 PFAM MarC family integral membrane protein K05595 - - 0.0000000000000000000000000000000000000000000000000000000000000000164 228.0
SYD3_k127_10615383_1 helix_turn_helix ASNC type K03718 - - 0.0000000000000000000000000000000000001756 146.0
SYD3_k127_1062599_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.0 1295.0
SYD3_k127_1062599_1 Participates in initiation and elongation during chromosome replication - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 613.0
SYD3_k127_1062599_2 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 387.0
SYD3_k127_1062599_3 Phospholipase/Carboxylesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005709 280.0
SYD3_k127_1062599_4 mannose-6-phosphate isomerase - - - 0.0000000000000000000000000000000000000000000000000001152 187.0
SYD3_k127_1062599_5 - - - - 0.000000000000000000000008842 104.0
SYD3_k127_10705599_0 Fructose-bisphosphate aldolase K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 561.0
SYD3_k127_10705599_1 Thioredoxin reductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 486.0
SYD3_k127_10705599_2 Subtilase family K08651 - 3.4.21.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002091 386.0
SYD3_k127_10713361_0 COG0308 Aminopeptidase N - - - 5.929e-309 964.0
SYD3_k127_10713361_1 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006658 591.0
SYD3_k127_10713361_10 AhpC/TSA family - - - 0.0000000000000000000000001325 112.0
SYD3_k127_10713361_11 Heavy-metal-associated domain K08364 - - 0.000000000000001429 81.0
SYD3_k127_10713361_12 - - - - 0.00000002535 62.0
SYD3_k127_10713361_2 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006102 484.0
SYD3_k127_10713361_3 Peptidase m48 ste24p - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001605 267.0
SYD3_k127_10713361_4 - - - - 0.000000000000000000000000000000000000000000000000000000000001452 211.0
SYD3_k127_10713361_5 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000006547 214.0
SYD3_k127_10713361_6 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000003388 226.0
SYD3_k127_10713361_7 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000000000001065 206.0
SYD3_k127_10713361_8 TM2 domain - - - 0.000000000000000000000000000000000000000000001911 167.0
SYD3_k127_10713361_9 Protein of unknown function (DUF2752) - - - 0.00000000000000000000000000000000001273 140.0
SYD3_k127_10750880_0 OmpA MotB domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 345.0
SYD3_k127_10750880_1 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 333.0
SYD3_k127_10750880_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000003838 254.0
SYD3_k127_10750880_3 protein CHP03519, membrane, Bacteroidetes - - - 0.00000000000000000000000000000000000000000000000000000000000003456 226.0
SYD3_k127_10786183_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000057 516.0
SYD3_k127_10786183_1 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004296 370.0
SYD3_k127_10786183_2 GlcNAc-PI de-N-acetylase K01463 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003307 282.0
SYD3_k127_10842170_0 PFAM Papain family cysteine protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000237 365.0
SYD3_k127_10842170_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008042 330.0
SYD3_k127_10842170_2 Caspase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001427 274.0
SYD3_k127_10842170_5 - - - - 0.000000000189 70.0
SYD3_k127_10883093_0 Gliding motility-associated ABC transporter ATP-binding subunit GldA K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 289.0
SYD3_k127_10883093_2 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000001485 188.0
SYD3_k127_1118655_0 Nitrous oxide reductase K00376 - 1.7.2.4 0.0 1172.0
SYD3_k127_1118655_1 lipoprotein involved in nitrous oxide reduction K19342 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000603 310.0
SYD3_k127_1133801_0 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 342.0
SYD3_k127_1133801_1 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000004358 222.0
SYD3_k127_1133801_2 PFAM Outer membrane protein, OmpA MotB, C-terminal - - - 0.00000000000000000000009325 115.0
SYD3_k127_11482_0 Phosphoesterase PA-phosphatase related - - - 1.225e-226 709.0
SYD3_k127_11482_1 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 466.0
SYD3_k127_11482_10 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000002078 108.0
SYD3_k127_11482_11 COG0457 FOG TPR repeat - - - 0.0000000000000000001614 93.0
SYD3_k127_11482_13 - - - - 0.000946 44.0
SYD3_k127_11482_2 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 435.0
SYD3_k127_11482_3 PFAM Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 422.0
SYD3_k127_11482_4 Bacterial regulatory helix-turn-helix protein, lysR family K04761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 394.0
SYD3_k127_11482_5 COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003324 275.0
SYD3_k127_11482_6 YceI-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004589 268.0
SYD3_k127_11482_7 Peptidyl-prolyl cis-trans isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000004526 250.0
SYD3_k127_11482_8 Phosphoribosyl transferase domain K07100 - - 0.0000000000000000000000000000000000000000000000000002441 189.0
SYD3_k127_11482_9 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000000000002838 175.0
SYD3_k127_1173894_0 elongation factor G domain IV K02355 - - 4.307e-314 975.0
SYD3_k127_1173894_1 heme binding - - - 6.265e-313 1007.0
SYD3_k127_1173894_10 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003281 282.0
SYD3_k127_1173894_11 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001078 270.0
SYD3_k127_1173894_12 PFAM Peptidase, membrane zinc metallopeptidase K06973 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001038 264.0
SYD3_k127_1173894_13 chlorophyll binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003866 262.0
SYD3_k127_1173894_14 GSCFA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001159 257.0
SYD3_k127_1173894_15 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000006371 229.0
SYD3_k127_1173894_16 Belongs to the GbsR family - - - 0.000000000000000000000000000000000000000001525 161.0
SYD3_k127_1173894_17 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000002823 114.0
SYD3_k127_1173894_18 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000000000006696 97.0
SYD3_k127_1173894_19 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000001922 89.0
SYD3_k127_1173894_2 PFAM Penicillin binding protein transpeptidase domain K05366 - 2.4.1.129,3.4.16.4 1.244e-237 761.0
SYD3_k127_1173894_20 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000000000006168 83.0
SYD3_k127_1173894_21 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD - - - 0.00000000005182 70.0
SYD3_k127_1173894_24 Endoribonuclease L-PSP - - - 0.0000009685 50.0
SYD3_k127_1173894_3 acyl-CoA dehydrogenase K00252 - 1.3.8.6 1.041e-225 702.0
SYD3_k127_1173894_4 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.047e-219 696.0
SYD3_k127_1173894_5 COGs COG1629 Outer membrane receptor protein mostly Fe transport - - - 1.561e-210 687.0
SYD3_k127_1173894_6 seryl-tRNA synthetase K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 545.0
SYD3_k127_1173894_7 Aldo/keto reductase family K19265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 518.0
SYD3_k127_1173894_8 Phosphate starvation-inducible protein PhoH K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 438.0
SYD3_k127_1173894_9 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 372.0
SYD3_k127_11944_0 TonB dependent receptor K02014 - - 4.331e-202 654.0
SYD3_k127_11944_1 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 543.0
SYD3_k127_11944_2 Pectate lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002785 504.0
SYD3_k127_11944_3 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 342.0
SYD3_k127_11944_4 Tocopherol cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007618 329.0
SYD3_k127_11944_5 - - - - 0.000000000000000000000000000000000000000000000001218 179.0
SYD3_k127_11944_6 NUDIX domain - - - 0.00000000000000000000000000000000000000000000001261 178.0
SYD3_k127_11944_7 Metallo-peptidase family M12B Reprolysin-like - - - 0.0000000000008997 83.0
SYD3_k127_11944_8 Domain of unknown function (DUF4271) - - - 0.00001423 57.0
SYD3_k127_1228727_0 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 0.0 1164.0
SYD3_k127_1228727_1 glucose sorbosone - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006959 357.0
SYD3_k127_1228727_2 - - - - 0.0000000000000000000000000000000000000000002125 171.0
SYD3_k127_1228727_3 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000007905 109.0
SYD3_k127_1229650_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 5.832e-227 712.0
SYD3_k127_1229650_1 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 424.0
SYD3_k127_1229650_2 Two component regulator three Y - - - 0.0000000000000000000000000001873 121.0
SYD3_k127_1326853_0 TonB-dependent receptor plug domain K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 362.0
SYD3_k127_1326853_1 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001598 294.0
SYD3_k127_1326853_2 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000677 238.0
SYD3_k127_134020_0 Metallo-peptidase family M12 - - - 2.786e-207 675.0
SYD3_k127_134020_1 Metallo-peptidase family M12 - - - 1.284e-204 667.0
SYD3_k127_134020_10 Thioesterase superfamily K02614 - - 0.000000000000000000000000000000000000000000962 162.0
SYD3_k127_134020_11 Phenylacetic acid catabolic protein K02611 - 1.14.13.149 0.000000000000000000000000000000000003534 139.0
SYD3_k127_134020_13 Domain of unknown function (DUF4190) - - - 0.000000001455 62.0
SYD3_k127_134020_2 PUA domain containing protein K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000361 432.0
SYD3_k127_134020_3 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 430.0
SYD3_k127_134020_4 Y_Y_Y domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002766 427.0
SYD3_k127_134020_5 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 318.0
SYD3_k127_134020_6 Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004014 254.0
SYD3_k127_134020_7 TIGRFAM phenylacetate-CoA oxygenase, PaaJ subunit K02612 GO:0006082,GO:0006725,GO:0006805,GO:0008150,GO:0008152,GO:0009056,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016054,GO:0019439,GO:0019748,GO:0019752,GO:0032787,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0050896,GO:0051716,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0098754,GO:1901360,GO:1901361,GO:1901575 - 0.00000000000000000000000000000000000000000000000008867 182.0
SYD3_k127_134020_8 PFAM Lipid polyisoprenoid-binding, YceI-like - - - 0.000000000000000000000000000000000000000000003664 170.0
SYD3_k127_134020_9 YceI-like domain - - - 0.0000000000000000000000000000000000000000007186 166.0
SYD3_k127_1373398_0 Participates in initiation and elongation during chromosome replication - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 587.0
SYD3_k127_1373398_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009809 382.0
SYD3_k127_1373398_2 Response regulator of the LytR AlgR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004742 261.0
SYD3_k127_1385260_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004478 366.0
SYD3_k127_1385260_1 PFAM Chloroplast import component protein (Tic20) - - - 0.000000000000000000000007396 104.0
SYD3_k127_1385260_3 Carboxypeptidase regulatory-like domain - - - 0.0000000000003557 78.0
SYD3_k127_1385260_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.000000003884 57.0
SYD3_k127_1389949_0 Peptidase S9, prolyl oligopeptidase, catalytic domain K01354 - 3.4.21.83 0.0 1060.0
SYD3_k127_1389949_1 Amidinotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 309.0
SYD3_k127_1389949_2 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000003955 156.0
SYD3_k127_1482980_0 receptor K02014 - - 0.0 1241.0
SYD3_k127_1482980_1 Serine phosphatase RsbU regulator of sigma subunit K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006127 393.0
SYD3_k127_1482980_2 Permease, YjgP YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005515 353.0
SYD3_k127_1482980_3 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 299.0
SYD3_k127_1482980_4 alginic acid biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 298.0
SYD3_k127_1482980_5 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003696 282.0
SYD3_k127_1482980_6 CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000003692 232.0
SYD3_k127_1482980_7 TM2 domain - - - 0.000000000000000000000000000000000000000000000000000000000000004371 226.0
SYD3_k127_1482980_8 Transcriptional regulator - - - 0.00000000000000000000000000000001247 129.0
SYD3_k127_1511327_0 PFAM Zinc carboxypeptidase - - - 4.383e-252 803.0
SYD3_k127_1511327_1 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007496 486.0
SYD3_k127_1511327_2 amino acid K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 436.0
SYD3_k127_1511327_3 Domain of unknown function DUF11 - - - 0.00000000000000000791 93.0
SYD3_k127_1581121_0 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 0.0 1017.0
SYD3_k127_1581121_1 Peptidase m28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 601.0
SYD3_k127_1581121_10 O-Methyltransferase - - - 0.000000000000000000000000000000000000001558 157.0
SYD3_k127_1581121_11 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000565 137.0
SYD3_k127_1581121_12 FecR protein - - - 0.000000000000000000000000000001296 133.0
SYD3_k127_1581121_2 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 427.0
SYD3_k127_1581121_3 pyrroloquinoline quinone binding K01206,K01218 - 3.2.1.51,3.2.1.78 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 398.0
SYD3_k127_1581121_4 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 385.0
SYD3_k127_1581121_5 Ferredoxin--NADP reductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 319.0
SYD3_k127_1581121_6 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000298 319.0
SYD3_k127_1581121_7 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000000000000000000000000000000007072 221.0
SYD3_k127_1581121_8 - - - - 0.000000000000000000000000000000000000000000000008011 178.0
SYD3_k127_1581121_9 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000000000006447 171.0
SYD3_k127_1582158_0 Mur ligase middle domain K01924,K02558 - 6.3.2.45,6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 467.0
SYD3_k127_1582158_1 Redoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 395.0
SYD3_k127_1582158_11 Transposase IS66 family - - - 0.000001029 52.0
SYD3_k127_1582158_2 PFAM Integrase core domain K07497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007158 365.0
SYD3_k127_1582158_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 348.0
SYD3_k127_1582158_4 cytochrome C peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 295.0
SYD3_k127_1582158_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005453 251.0
SYD3_k127_1582158_6 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000007676 232.0
SYD3_k127_1582158_7 S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000001167 196.0
SYD3_k127_1582158_8 Gliding motility-associated C-terminal domain - - - 0.000000000000000000000000000000000000000000002479 182.0
SYD3_k127_1582158_9 PFAM Transposase K07483 - - 0.00000000000000000000000003407 111.0
SYD3_k127_1589271_0 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005039 627.0
SYD3_k127_1589271_1 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 620.0
SYD3_k127_1589271_2 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000006401 168.0
SYD3_k127_1589271_3 Thioredoxin-like - - - 0.000000000000000000000000000002229 134.0
SYD3_k127_1589271_4 - - - - 0.0000000000000000000000000004485 113.0
SYD3_k127_1589271_6 Helix-turn-helix XRE-family like proteins - - - 0.0000000000001002 76.0
SYD3_k127_1589271_8 - - - - 0.00002192 52.0
SYD3_k127_1595437_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 1.104e-281 887.0
SYD3_k127_1595437_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 3.681e-241 758.0
SYD3_k127_1595437_10 Pectate lyase K01179,K03768,K08738 - 3.2.1.4,5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000003095 238.0
SYD3_k127_1595437_11 Bacterial trigger factor protein (TF) K03545 - - 0.0000000000000000000000000000000000255 151.0
SYD3_k127_1595437_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 3.724e-197 622.0
SYD3_k127_1595437_3 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005984 586.0
SYD3_k127_1595437_4 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 400.0
SYD3_k127_1595437_5 phosphohydrolase K06885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 381.0
SYD3_k127_1595437_6 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 349.0
SYD3_k127_1595437_7 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001857 252.0
SYD3_k127_1595437_8 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000007175 255.0
SYD3_k127_1595437_9 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001333 254.0
SYD3_k127_1627111_0 Amino acid permease K03294 - - 4.054e-220 690.0
SYD3_k127_1627111_1 Tetratricopeptide repeat - - - 1.424e-214 680.0
SYD3_k127_1627111_2 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102,K11103 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006666 534.0
SYD3_k127_1627111_3 phosphate transporter K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 447.0
SYD3_k127_1627111_4 Predicted periplasmic lipoprotein (DUF2279) - - - 0.00000000000000000000000000000000000004215 148.0
SYD3_k127_1627111_5 amino acid K03294 - - 0.000000002313 58.0
SYD3_k127_1663113_0 TonB-linked outer membrane protein, SusC RagA family - - - 1.493e-313 987.0
SYD3_k127_1663113_1 Peptidase S9 prolyl oligopeptidase active site domain protein - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044464,GO:0046983,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 1.072e-265 832.0
SYD3_k127_1663113_10 ATPases associated with a variety of cellular activities K11710,K19973 - 3.6.3.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004869 316.0
SYD3_k127_1663113_11 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 298.0
SYD3_k127_1663113_12 PFAM Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001284 282.0
SYD3_k127_1663113_13 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004611 290.0
SYD3_k127_1663113_14 dependent repressor K03709 - - 0.000000000000000000000000000000000000000000000000000000000000000000008293 240.0
SYD3_k127_1663113_15 PFAM histidine kinase internal region - - - 0.000000000000000000000000000000000000000000000000000000001139 215.0
SYD3_k127_1663113_16 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000000002458 210.0
SYD3_k127_1663113_17 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000002062 160.0
SYD3_k127_1663113_18 COG1680 Beta-lactamase class C and other penicillin binding - - - 0.0000000000000000000000000001278 116.0
SYD3_k127_1663113_19 ribosomal protein - - - 0.0000000000000000000000000007632 116.0
SYD3_k127_1663113_2 Belongs to the glycosyl hydrolase 30 family K01201 - 3.2.1.45 2.108e-227 712.0
SYD3_k127_1663113_20 Domain of unknown function (DUF4286) - - - 0.000000000000000000000000002974 113.0
SYD3_k127_1663113_21 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000000000003513 112.0
SYD3_k127_1663113_22 Sec-independent protein translocase protein TatA K03116 - - 0.0000000000000000003432 89.0
SYD3_k127_1663113_23 COG3279 Response regulator of the LytR AlgR family K02477 - - 0.00000000000000002931 86.0
SYD3_k127_1663113_24 Outer membrane protein (OmpH-like) K06142 - - 0.0000007547 59.0
SYD3_k127_1663113_3 major facilitator K16211 - - 3.12e-219 689.0
SYD3_k127_1663113_4 acyl-CoA dehydrogenase - - - 7.911e-195 615.0
SYD3_k127_1663113_5 ADP binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004643 537.0
SYD3_k127_1663113_6 Belongs to the glycosyl hydrolase 30 family K01201 - 3.2.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 511.0
SYD3_k127_1663113_7 Pfam:SusD K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 493.0
SYD3_k127_1663113_8 Signal transduction response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007233 340.0
SYD3_k127_1663113_9 Zinc-uptake complex component A periplasmic K09815,K11707 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008579 332.0
SYD3_k127_1717603_0 long-chain fatty acid transport protein - - - 0.00000000000000000131 86.0
SYD3_k127_1717603_1 - - - - 0.0001414 46.0
SYD3_k127_1726822_0 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000004033 228.0
SYD3_k127_1726822_1 Thiol-disulfide isomerase-like thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000008028 213.0
SYD3_k127_1726822_10 - - - - 0.0000009393 58.0
SYD3_k127_1726822_2 - - - - 0.0000000000000000000000000000000000000000000000000002932 190.0
SYD3_k127_1726822_3 C-terminal domain of CHU protein family - - - 0.000000000000000000000000002575 131.0
SYD3_k127_1726822_6 - - - - 0.000000000000000000000000003841 128.0
SYD3_k127_1726822_8 CarboxypepD_reg-like domain - - - 0.000000000000000000006799 94.0
SYD3_k127_1726822_9 Belongs to the glycosyl hydrolase 8 (cellulase D) family - - - 0.000000002313 72.0
SYD3_k127_1728094_0 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005878 497.0
SYD3_k127_1728094_1 IMG reference gene - - - 0.000000000000000000000000000000000000000000000000000000000000000002508 260.0
SYD3_k127_1728094_2 Dystroglycan-type cadherin-like domains. - - - 0.0000000000000000000000000000000000000000000001435 195.0
SYD3_k127_1728094_4 Trypsin - - - 0.0001025 53.0
SYD3_k127_1732877_0 Phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002966 416.0
SYD3_k127_1732877_1 TIGRFAM cysteine desulfurase family protein, VC1184 subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 314.0
SYD3_k127_1732877_2 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000005992 165.0
SYD3_k127_1732877_3 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000000002301 115.0
SYD3_k127_176057_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1053.0
SYD3_k127_176057_1 Alanine dehydrogenase/PNT, C-terminal domain K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009308 589.0
SYD3_k127_176057_10 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005166 303.0
SYD3_k127_176057_11 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 288.0
SYD3_k127_176057_12 Pseudouridine synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000000000000001878 240.0
SYD3_k127_176057_13 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000326 245.0
SYD3_k127_176057_14 ribonuclease BN K07058 - - 0.00000000000000000000000000000000000000000000000000000000007615 215.0
SYD3_k127_176057_15 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000002253 216.0
SYD3_k127_176057_16 thioesterase K07107 - - 0.00000000000000000000000000000000000000000001029 167.0
SYD3_k127_176057_17 - - - - 0.0000000000000000000000000000000000000000009715 164.0
SYD3_k127_176057_2 Arginine deiminase K01478 - 3.5.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 530.0
SYD3_k127_176057_3 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005323 458.0
SYD3_k127_176057_4 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 425.0
SYD3_k127_176057_5 Phage shock protein A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 423.0
SYD3_k127_176057_6 ATPases associated with a variety of cellular activities K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 385.0
SYD3_k127_176057_7 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K08314 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 360.0
SYD3_k127_176057_8 Outer membrane protein protective antigen OMA87 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 384.0
SYD3_k127_176057_9 acyl-CoA reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004387 313.0
SYD3_k127_1777854_0 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 2.239e-208 673.0
SYD3_k127_1777854_1 M6 family metalloprotease domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 590.0
SYD3_k127_1777854_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000527 489.0
SYD3_k127_1777854_3 LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003043 356.0
SYD3_k127_1777854_4 M6 family metalloprotease domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007973 273.0
SYD3_k127_1777854_5 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000002619 235.0
SYD3_k127_1777854_7 - - - - 0.000001536 51.0
SYD3_k127_1784286_0 Belongs to the aldehyde dehydrogenase family K10217 - 1.2.1.32,1.2.1.85 9.861e-194 615.0
SYD3_k127_1784286_1 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 531.0
SYD3_k127_1784286_10 Endoribonuclease L-PSP K15067 - 3.5.99.5 0.000000000000000000000000000000000000000002148 160.0
SYD3_k127_1784286_11 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000000000000000001727 111.0
SYD3_k127_1784286_12 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000008925 93.0
SYD3_k127_1784286_13 - - - - 0.0000000000002051 82.0
SYD3_k127_1784286_14 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000001481 60.0
SYD3_k127_1784286_2 PFAM Alpha amylase, catalytic K01176,K01208 GO:0000272,GO:0000287,GO:0001871,GO:0003674,GO:0003824,GO:0004553,GO:0004556,GO:0005488,GO:0005509,GO:0005575,GO:0005975,GO:0005976,GO:0005982,GO:0005983,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0016020,GO:0016052,GO:0016160,GO:0016787,GO:0016798,GO:0019867,GO:0030246,GO:0030247,GO:0043167,GO:0043169,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0046872,GO:0071704,GO:1901575,GO:2001070 3.2.1.1,3.2.1.133,3.2.1.135,3.2.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 509.0
SYD3_k127_1784286_3 Amidohydrolase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003115 463.0
SYD3_k127_1784286_4 Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid K00486 - 1.14.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 454.0
SYD3_k127_1784286_5 Tryptophan 2,3-dioxygenase K00453 - 1.13.11.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 432.0
SYD3_k127_1784286_6 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 335.0
SYD3_k127_1784286_7 NAD(P)H-binding K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004939 303.0
SYD3_k127_1784286_8 PFAM Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 303.0
SYD3_k127_1784286_9 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000001398 265.0
SYD3_k127_1802967_0 Tricorn protease C1 domain K08676 - - 2.551e-289 910.0
SYD3_k127_1802967_1 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 3.454e-207 657.0
SYD3_k127_1802967_2 Bestrophin, RFP-TM, chloride channel K08994 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 521.0
SYD3_k127_1802967_3 metallocarboxypeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 374.0
SYD3_k127_1802967_4 Transposase IS200 like - - - 0.00000000000000000000000000000000000000000000000000000000000002092 220.0
SYD3_k127_1802967_5 - - - - 0.00000000000000000000000000000000000000000000000000009433 188.0
SYD3_k127_1802967_6 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000001294 179.0
SYD3_k127_1802967_7 Inward rectifier potassium channel K08715 - - 0.00000000000000000000000000000000000000000007914 165.0
SYD3_k127_1802967_8 Protease prsW family - - - 0.000000000000000000000000000000000001053 147.0
SYD3_k127_1802967_9 Inward rectifier potassium channel K08715 - - 0.00000000000000000000001146 106.0
SYD3_k127_1820412_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1197.0
SYD3_k127_1820412_1 ABC transporter K15738 - - 5.826e-290 897.0
SYD3_k127_1820412_10 secreted Zn-dependent protease - - - 0.000000000007657 73.0
SYD3_k127_1820412_2 Membrane bound O-acyl transferase, MBOAT family protein - - - 3.135e-205 647.0
SYD3_k127_1820412_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 559.0
SYD3_k127_1820412_4 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 508.0
SYD3_k127_1820412_5 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007793 250.0
SYD3_k127_1820412_6 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000299 236.0
SYD3_k127_1820412_7 Sulfotransferase domain - - - 0.00000000000000000000000000000000000000000000000000001113 201.0
SYD3_k127_1820412_8 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000003212 171.0
SYD3_k127_1820412_9 - - - - 0.0000000000000000001991 101.0
SYD3_k127_1824620_0 Tricorn protease C1 domain K08676 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 423.0
SYD3_k127_1824620_1 Metallo-peptidase family M12B Reprolysin-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006866 277.0
SYD3_k127_1824620_2 domain protein K01179,K01997,K04618 - 1.1.3.9,3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000001482 250.0
SYD3_k127_182592_0 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 4.468e-244 759.0
SYD3_k127_182592_1 ABC transporter K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 627.0
SYD3_k127_182592_10 Domain of unknown function (DUF4835) - - - 0.00001271 48.0
SYD3_k127_182592_2 COG1228 Imidazolonepropionase and related K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005099 486.0
SYD3_k127_182592_3 SPTR CHU large protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 494.0
SYD3_k127_182592_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0071704 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 444.0
SYD3_k127_182592_5 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 283.0
SYD3_k127_182592_6 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000001556 207.0
SYD3_k127_182592_7 1-aminocyclopropane-1-carboxylate deaminase K01505 - 3.5.99.7 0.0000000000000000000000000000000000000000000000008686 186.0
SYD3_k127_182592_8 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000033 172.0
SYD3_k127_183244_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 5.073e-265 835.0
SYD3_k127_183244_1 TonB dependent receptor - - - 3.445e-263 844.0
SYD3_k127_183244_10 Domain of unknown function (DUF4143) K07133 - - 0.000001351 52.0
SYD3_k127_183244_2 Peptidase family C25 - - - 8.793e-243 812.0
SYD3_k127_183244_3 RagB SusD domain protein K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 568.0
SYD3_k127_183244_4 Alpha/beta hydrolase family K01175 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016787,GO:0016788,GO:0016790,GO:0044424,GO:0044444,GO:0044464,GO:0052689 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003704 268.0
SYD3_k127_183244_5 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008401 250.0
SYD3_k127_183244_6 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000001344 213.0
SYD3_k127_183244_7 cephalosporin hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000195 208.0
SYD3_k127_183244_8 Putative rhamnosyl transferase - - - 0.0000000000000000000000000000001467 134.0
SYD3_k127_189838_0 PFAM Glycoside hydrolase family 65, central catalytic K00691 - 2.4.1.8 2.891e-288 903.0
SYD3_k127_189838_1 Histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008529 365.0
SYD3_k127_189838_2 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000525 205.0
SYD3_k127_189838_3 beta-phosphoglucomutase K01838 - 5.4.2.6 0.00000000000000000000000000000000000000000000000000000001259 223.0
SYD3_k127_189838_4 histidine kinase dimerisation and phosphoacceptor region - - - 0.00000000000000000000000000000000000000000006452 182.0
SYD3_k127_189838_5 phosphohistidine phosphatase, SixA K08296 - - 0.000000000000000000000000000000000000004011 151.0
SYD3_k127_1904742_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 8.086e-316 977.0
SYD3_k127_1904742_1 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 519.0
SYD3_k127_1904742_10 PFAM Plasmid stabilisation system protein - - - 0.0001857 44.0
SYD3_k127_1904742_11 - - - - 0.0008264 43.0
SYD3_k127_1904742_2 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid K01823 - 5.3.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 373.0
SYD3_k127_1904742_3 Serine aminopeptidase, S33 K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 359.0
SYD3_k127_1904742_4 amp-binding enzyme K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 355.0
SYD3_k127_1904742_5 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000005962 214.0
SYD3_k127_1904742_6 - - - - 0.00000000000000000000000000000000000000000000000001132 183.0
SYD3_k127_1904742_7 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000002239 179.0
SYD3_k127_1904742_8 Polysaccharide biosynthesis protein - - - 0.0000000000000000001185 93.0
SYD3_k127_1904742_9 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000000000003223 70.0
SYD3_k127_2025676_0 PFAM BNR Asp-box repeat - - - 0.0 1084.0
SYD3_k127_2025676_1 PKD domain containing protein - - - 2.272e-243 773.0
SYD3_k127_2025676_10 Domain of unknown function (DUF3817) - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000678 98.0
SYD3_k127_2025676_2 S1 P1 Nuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009531 367.0
SYD3_k127_2025676_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008903 363.0
SYD3_k127_2025676_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000008541 205.0
SYD3_k127_2025676_5 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000007693 171.0
SYD3_k127_2025676_6 Belongs to the SUA5 family K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000001094 168.0
SYD3_k127_2025676_7 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.00000000000000000000000000000000000000008008 154.0
SYD3_k127_2025676_8 DNA mismatch repair protein MutT K07098 - - 0.000000000000000000000000000000000004171 143.0
SYD3_k127_2025676_9 - - - - 0.000000000000000000000000000000007444 134.0
SYD3_k127_2041015_0 serine-type peptidase activity K08676 - - 0.0 1431.0
SYD3_k127_2041015_1 Putative zinc ribbon domain - - - 0.000000000000000000000000002462 113.0
SYD3_k127_2041712_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.26e-295 912.0
SYD3_k127_2041712_1 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 410.0
SYD3_k127_2041712_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002854 346.0
SYD3_k127_2041712_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 296.0
SYD3_k127_2041712_4 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000000000000007058 182.0
SYD3_k127_2041712_5 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000000000005243 172.0
SYD3_k127_2041712_6 Excinuclease ABC subunit B - - - 0.0000000000000000000000000001238 123.0
SYD3_k127_2041712_7 Endoribonuclease that initiates mRNA decay K18682 - - 0.000000000000000000002195 93.0
SYD3_k127_2041712_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000002864 83.0
SYD3_k127_2080280_0 Two component regulator propeller - - - 2.154e-235 762.0
SYD3_k127_2080280_1 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005403 246.0
SYD3_k127_2080280_2 cellulase activity - - - 0.00000000000000000000007147 114.0
SYD3_k127_2125138_0 arsenical-resistance protein K03325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006151 571.0
SYD3_k127_2125138_1 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000668 332.0
SYD3_k127_2125138_2 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000003713 247.0
SYD3_k127_2125138_3 Protein of unknown function (DUF664) - - - 0.00000000000000000000000000000000000000000000000000000004325 204.0
SYD3_k127_2125138_4 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000001797 175.0
SYD3_k127_2125138_5 MraZ protein, putative antitoxin-like K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.00000000000000000000000000000000000000000001507 167.0
SYD3_k127_2125138_6 domain, Protein - - - 0.00000000000000000000000001538 128.0
SYD3_k127_2125138_7 SPTR Cell surface protein - - - 0.000000000000000006324 100.0
SYD3_k127_2133259_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 1.185e-272 856.0
SYD3_k127_2133259_1 8-amino-7-oxononanoate synthase K00639 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 569.0
SYD3_k127_2133259_2 Pyridoxal-phosphate dependent enzyme K01697,K01738 - 2.5.1.47,4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003393 369.0
SYD3_k127_2133259_3 NAD dependent epimerase dehydratase family protein K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000002711 216.0
SYD3_k127_2133259_4 Protein of unknown function (DUF1573) - - - 0.000000000000000000000000000000000002933 142.0
SYD3_k127_2133259_5 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00000000000000000003905 95.0
SYD3_k127_2133259_6 Belongs to the UPF0246 family K09861 - - 0.000173 47.0
SYD3_k127_2190432_0 Pfam Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 9.441e-217 682.0
SYD3_k127_2190432_1 SPFH Band 7 PHB domain protein K07192 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 556.0
SYD3_k127_2190432_10 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000007147 207.0
SYD3_k127_2190432_11 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000004695 200.0
SYD3_k127_2190432_12 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000001275 202.0
SYD3_k127_2190432_13 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.00000000000000000000000000000000000000000000000000001252 192.0
SYD3_k127_2190432_14 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000003102 202.0
SYD3_k127_2190432_15 serine protease - - - 0.000000000000000000000000000000006681 135.0
SYD3_k127_2190432_16 - - - - 0.000000000000000000000000000001013 125.0
SYD3_k127_2190432_17 COGs COG0791 Cell wall-associated hydrolase (invasion-associated protein) - - - 0.000000000000000000000000476 111.0
SYD3_k127_2190432_18 SET domain K07117 - - 0.000000000000000000000003958 107.0
SYD3_k127_2190432_19 SWIM zinc finger - - - 0.000000000001007 73.0
SYD3_k127_2190432_2 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 536.0
SYD3_k127_2190432_21 Domain of unknown function (DUF4783) - - - 0.000001383 55.0
SYD3_k127_2190432_22 Putative auto-transporter adhesin, head GIN domain - - - 0.0001549 52.0
SYD3_k127_2190432_3 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003004 481.0
SYD3_k127_2190432_4 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile K01241 - 3.2.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005811 389.0
SYD3_k127_2190432_5 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005009 348.0
SYD3_k127_2190432_6 alpha beta - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003693 359.0
SYD3_k127_2190432_7 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002747 271.0
SYD3_k127_2190432_8 amidohydrolase K13566 - 3.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005064 271.0
SYD3_k127_2190432_9 Haloacid dehalogenase-like hydrolase K07025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002492 257.0
SYD3_k127_2197463_0 - - - - 0.00000000000000000000000000000000000000000000000003229 186.0
SYD3_k127_2197463_1 Acetyltransferase (GNAT) domain K22441 - 2.3.1.57 0.000000000000000000000000000000000000000000001591 171.0
SYD3_k127_2197463_2 Concanavalin A-like lectin/glucanases superfamily - - - 0.0000000000000000000000000454 125.0
SYD3_k127_2197463_3 of the AAA class - - - 0.0000000000000000000355 91.0
SYD3_k127_2197463_5 PFAM SMP-30 Gluconolaconase - - - 0.00000000008526 75.0
SYD3_k127_2197463_6 Subtilase family - - - 0.000000001805 71.0
SYD3_k127_2197463_7 TIGRFAM conserved repeat domain K01342,K01387,K01729,K12287,K20276,K21449 GO:0005575,GO:0005576 3.4.21.62,3.4.24.3,4.2.2.3 0.00006769 56.0
SYD3_k127_2232898_0 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 5.056e-312 971.0
SYD3_k127_2232898_1 Fungalysin metallopeptidase (M36) - - - 7.952e-301 964.0
SYD3_k127_2232898_2 Peptidase M16 K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008261 400.0
SYD3_k127_2232898_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 368.0
SYD3_k127_2232898_4 Peptidase family M1 domain K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008201 385.0
SYD3_k127_2232898_5 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006305 351.0
SYD3_k127_2232898_6 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 - 3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000002232 254.0
SYD3_k127_2232898_7 Protein of unknown function, DUF255 - - - 0.0000000000000005996 84.0
SYD3_k127_2262587_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1262.0
SYD3_k127_2262587_1 PFAM Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009139 406.0
SYD3_k127_2262587_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006642 351.0
SYD3_k127_228576_0 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K01585 - 4.1.1.19 2.036e-215 677.0
SYD3_k127_228576_1 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 4.494e-200 650.0
SYD3_k127_228576_10 Anthranilate synthase K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000004027 202.0
SYD3_k127_228576_11 Penicillinase repressor - - - 0.000000000000000000000000000000000000000005114 157.0
SYD3_k127_228576_12 Glutathione peroxidase K03564 - 1.11.1.15 0.000000000000000000000000000000000000003969 152.0
SYD3_k127_228576_13 COG1104 Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes K04487 - 2.8.1.7 0.00000000000000000000000000000000000001977 147.0
SYD3_k127_228576_14 - - - - 0.00000000000000000000000004471 110.0
SYD3_k127_228576_15 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000003474 83.0
SYD3_k127_228576_17 COG1884 Methylmalonyl-CoA mutase, N-terminal domain subunit K01847 - 5.4.99.2 0.00007837 54.0
SYD3_k127_228576_2 Deoxyhypusine synthase K00809 - 2.5.1.46 3.2e-199 625.0
SYD3_k127_228576_3 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 539.0
SYD3_k127_228576_4 Peptidase, M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 436.0
SYD3_k127_228576_5 COGs COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004791 397.0
SYD3_k127_228576_6 Phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 306.0
SYD3_k127_228576_7 periplasmic protein kinase ArgK and related K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001774 262.0
SYD3_k127_228576_8 Sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000003227 248.0
SYD3_k127_228576_9 BlaR1 peptidase M56 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000134 263.0
SYD3_k127_2330131_0 peptidylprolyl isomerase K01802,K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 591.0
SYD3_k127_2330131_1 major facilitator superfamily K08151 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009474 570.0
SYD3_k127_2330131_2 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 487.0
SYD3_k127_2330131_3 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000002598 276.0
SYD3_k127_2330131_4 conserved protein (COG2071) K09166 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003132 262.0
SYD3_k127_2330131_5 penicillin-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001974 264.0
SYD3_k127_2330131_6 - - - - 0.0000000000000000000000000000000000000000000007414 174.0
SYD3_k127_2330131_7 RNA polymerase, sigma-54 factor K03092 - - 0.000000000000000000000000000000000000000001327 162.0
SYD3_k127_2330131_8 MORN repeat variant - - - 0.00000000000000000000000000000000000000105 156.0
SYD3_k127_2436874_0 PFAM sodium hydrogen exchanger K03455 - - 1.342e-302 945.0
SYD3_k127_2436874_1 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006357 484.0
SYD3_k127_2436874_2 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000001864 172.0
SYD3_k127_2436874_3 Protein of unknown function (DUF2851) - - - 0.0000000000000000000000000005583 115.0
SYD3_k127_2444393_0 glycosyl transferase - - - 1.998e-213 671.0
SYD3_k127_2444393_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005024 551.0
SYD3_k127_2444393_2 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009142 362.0
SYD3_k127_2444393_3 AhpC/TSA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 357.0
SYD3_k127_2444393_4 PFAM Peptidase M16 inactive domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005942 307.0
SYD3_k127_2444393_5 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD - - - 0.00000000000000000000000000000000000000000000000000000000000003115 220.0
SYD3_k127_2444393_6 5'-nucleotidase K01081 - 3.1.3.5 0.000000000000000000000000000000000000000000000000001999 191.0
SYD3_k127_2444393_7 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000000000000001398 182.0
SYD3_k127_2444393_8 - - - - 0.0000000000000000000000002713 112.0
SYD3_k127_2444393_9 BNR Asp-box repeat - - - 0.00000000003733 76.0
SYD3_k127_2486794_0 Domain of unknown function (DUF4397) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 598.0
SYD3_k127_2486794_1 PFAM PKD domain - - - 0.000000000000000000000000000000000000000000000000000000000000001896 250.0
SYD3_k127_2486794_2 IMG reference gene - - - 0.0000000000000000000000000000000000000000000000000005567 212.0
SYD3_k127_2486794_3 - - - - 0.0000000000000000000000000000000008739 133.0
SYD3_k127_2486794_4 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.00000000000000000000000007722 113.0
SYD3_k127_2486794_5 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0000138 49.0
SYD3_k127_2641283_0 COGs COG0659 Sulfate permease and related transporter (MFS superfamily) K03321 - - 7.356e-207 656.0
SYD3_k127_2641283_1 Reversible hydration of carbon dioxide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009654 322.0
SYD3_k127_2641283_2 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 290.0
SYD3_k127_2641283_3 Protein of unknown function (DUF2490) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001998 233.0
SYD3_k127_2687801_0 COGs COG2270 Permease of the major facilitator superfamily K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006701 327.0
SYD3_k127_2687801_1 Prokaryotic glutathione synthetase, ATP-grasp domain K05844 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016874,GO:0016879,GO:0016881,GO:0018169,GO:0018410,GO:0019538,GO:0031668,GO:0033554,GO:0036211,GO:0042802,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0070739,GO:0071496,GO:0071704,GO:0140096,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 301.0
SYD3_k127_2687801_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000001446 231.0
SYD3_k127_2687801_3 Protein of unknown function (DUF1698) - - - 0.0000000000000000000000000000000000000000001981 167.0
SYD3_k127_2735264_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.475e-216 681.0
SYD3_k127_2735264_1 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000006856 208.0
SYD3_k127_2735264_2 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000000008072 204.0
SYD3_k127_2735264_3 Domain of unknown function (DUF5103) - - - 0.00000000000000000000000000000000000000000000000000000004922 207.0
SYD3_k127_2735264_4 Transposase IS200 like - - - 0.0000000000000000000000000000000000000009065 156.0
SYD3_k127_2740313_0 TonB-dependent receptor plug domain K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005369 436.0
SYD3_k127_2740313_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000006214 246.0
SYD3_k127_2740313_2 - - - - 0.00000000000000156 91.0
SYD3_k127_2740313_3 Response regulator of the LytR AlgR family K02477 - - 0.000000000000005108 79.0
SYD3_k127_2740313_6 SMART LamG domain protein jellyroll fold domain protein - - - 0.0005102 53.0
SYD3_k127_2744695_0 heat shock protein 70 K04043,K04044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 604.0
SYD3_k127_2744695_1 Transketolase K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009986 505.0
SYD3_k127_2744695_10 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000917 164.0
SYD3_k127_2744695_11 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000000000000000000001682 131.0
SYD3_k127_2744695_12 - - - - 0.00000000000000000000000000000006371 128.0
SYD3_k127_2744695_14 Barrel-sandwich domain of CusB or HlyD membrane-fusion K07798 - - 0.000000000000000000003328 101.0
SYD3_k127_2744695_15 - - - - 0.000000000004838 70.0
SYD3_k127_2744695_16 - - - - 0.0005322 49.0
SYD3_k127_2744695_2 Transketolase K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 445.0
SYD3_k127_2744695_3 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 414.0
SYD3_k127_2744695_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009255 277.0
SYD3_k127_2744695_5 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000000000000000000000000000000003505 233.0
SYD3_k127_2744695_6 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000009018 242.0
SYD3_k127_2744695_7 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000000000000000001911 206.0
SYD3_k127_2744695_8 Protein of unknown function (DUF998) - - - 0.000000000000000000000000000000000000000000000000000000003493 214.0
SYD3_k127_2744695_9 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.00000000000000000000000000000000000000000000000000004941 193.0
SYD3_k127_2758255_0 Citrate lyase, alpha subunit (CitF) - - - 1.607e-283 876.0
SYD3_k127_2758255_1 Isocitrate isopropylmalate dehydrogenase K00030,K00031,K00052 - 1.1.1.41,1.1.1.42,1.1.1.85 3.451e-207 649.0
SYD3_k127_2758255_2 Belongs to the HpcH HpaI aldolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309 459.0
SYD3_k127_2773513_0 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 334.0
SYD3_k127_2773513_1 M6 family metalloprotease domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000001808 237.0
SYD3_k127_2773513_2 - - - - 0.0000000000000000000000000000000000000000003382 162.0
SYD3_k127_2773513_3 TfoX N-terminal domain - - - 0.00000000000000000000000000000000000001564 146.0
SYD3_k127_2773513_4 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000318 128.0
SYD3_k127_2811016_0 aconitate hydratase K01681 - 4.2.1.3 0.0 1232.0
SYD3_k127_2811016_1 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 1.82e-301 936.0
SYD3_k127_2811016_10 COGs COG2270 Permease of the major facilitator superfamily K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001838 471.0
SYD3_k127_2811016_11 fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 445.0
SYD3_k127_2811016_12 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005795 407.0
SYD3_k127_2811016_13 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 386.0
SYD3_k127_2811016_14 COGs COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 330.0
SYD3_k127_2811016_15 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000625 279.0
SYD3_k127_2811016_16 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001795 284.0
SYD3_k127_2811016_17 - - - - 0.000000000000000000000000000000000000000000000000000000000000000005506 231.0
SYD3_k127_2811016_18 TIGRFAM Peroxiredoxin, osmotically inducible protein C, subgroup K04063 - - 0.00000000000000000000000000000000000000000000000000000034 197.0
SYD3_k127_2811016_19 Uncharacterised protein family (UPF0104) K07027 - - 0.00000000000000000000000000000000000000000000000000006965 198.0
SYD3_k127_2811016_2 Domain in cystathionine beta-synthase and other proteins. - - - 2.023e-263 826.0
SYD3_k127_2811016_20 transcriptional regulator - - - 0.00000000000000000000000000000000000000004393 157.0
SYD3_k127_2811016_21 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000001895 159.0
SYD3_k127_2811016_22 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.00000000000000000000000000000000000001507 147.0
SYD3_k127_2811016_23 - - - - 0.00000000000000000000000000000002401 130.0
SYD3_k127_2811016_24 PFAM Uncharacterised protein family UPF0150 - - - 0.000000000000000000000000000004316 121.0
SYD3_k127_2811016_25 23S rRNA-intervening sequence protein - - - 0.000000000000000000000003123 108.0
SYD3_k127_2811016_26 HicA toxin of bacterial toxin-antitoxin, - - - 0.00000000000000000000004013 99.0
SYD3_k127_2811016_27 Two component transcriptional regulator, LytTR family K02477 - - 0.000000000000000000001808 98.0
SYD3_k127_2811016_28 - - - - 0.000000000000000000003663 103.0
SYD3_k127_2811016_3 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 8.677e-254 792.0
SYD3_k127_2811016_31 Hep Hag repeat protein - - - 0.00000005524 64.0
SYD3_k127_2811016_4 exo-alpha-(2->6)-sialidase activity - - - 6.041e-213 672.0
SYD3_k127_2811016_5 membrane protein involved in D-alanine export - - - 1.035e-195 621.0
SYD3_k127_2811016_6 Cellulase N-terminal ig-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 627.0
SYD3_k127_2811016_7 ABC transporter K15738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009135 617.0
SYD3_k127_2811016_8 COG1055 Na H antiporter NhaD and related arsenite - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004192 506.0
SYD3_k127_2811016_9 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007905 515.0
SYD3_k127_2813512_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 3.879e-249 792.0
SYD3_k127_2813512_1 Belongs to the heme-copper respiratory oxidase family K15862 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 405.0
SYD3_k127_2813512_2 Chloramphenicol acetyltransferase K19271 - 2.3.1.28 0.0000000000000000000000000000000000000000000000000000001641 197.0
SYD3_k127_2813512_3 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000002583 196.0
SYD3_k127_2813512_4 TIGRFAM cytochrome oxidase maturation protein, cbb3-type - - - 0.000000000001094 68.0
SYD3_k127_2831870_0 homogentisate 12-dioxygenase K00451 - 1.13.11.5 9.164e-225 701.0
SYD3_k127_2831870_1 4-hydroxyphenylpyruvate dioxygenase K00457 - 1.13.11.27 3.022e-197 621.0
SYD3_k127_2831870_11 long-chain fatty acid transporting porin activity K06076 - - 0.00000000000000000000000000000000000000000000001206 184.0
SYD3_k127_2831870_12 Predicted periplasmic lipoprotein (DUF2279) - - - 0.000000000000000000000000000000000000003183 151.0
SYD3_k127_2831870_13 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.0000000000000000000000000000000001306 135.0
SYD3_k127_2831870_14 nicotinamide mononucleotide transporter K03811 - - 0.00000000000000000000000000001118 125.0
SYD3_k127_2831870_15 SpoVT / AbrB like domain K07172 - - 0.00000000000000000000184 96.0
SYD3_k127_2831870_16 beta-propeller repeat - - - 0.0002037 55.0
SYD3_k127_2831870_2 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 610.0
SYD3_k127_2831870_3 OmpA MotB domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005571 622.0
SYD3_k127_2831870_4 fumarylacetoacetate (FAA) hydrolase K01555 - 3.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 544.0
SYD3_k127_2831870_5 Rieske (2fe-2S) K00499 - 1.14.15.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008625 423.0
SYD3_k127_2831870_6 carboxymuconolactone decarboxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 286.0
SYD3_k127_2831870_7 COG2818 3-methyladenine DNA glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000001097 252.0
SYD3_k127_2831870_8 Penicillin-insensitive murein endopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000149 240.0
SYD3_k127_2831870_9 Protein of unknown function (DUF2490) - - - 0.00000000000000000000000000000000000000000000000000000000000000004282 231.0
SYD3_k127_2842037_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 1.179e-247 782.0
SYD3_k127_2842037_1 ABC 3 transport family K11708,K11709 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 499.0
SYD3_k127_2842037_2 D-isomer specific 2-hydroxyacid dehydrogenase K00018,K00058 - 1.1.1.29,1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008706 367.0
SYD3_k127_2842037_3 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000004481 217.0
SYD3_k127_2842037_4 leucyltransferase activity K00684 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008914,GO:0016740,GO:0016746,GO:0016755,GO:0044424,GO:0044464,GO:0140096 2.3.2.6 0.00000000000000000000000000000000000002159 146.0
SYD3_k127_2842037_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000001984 107.0
SYD3_k127_2850808_0 Motility related/secretion protein - - - 1.55e-315 1011.0
SYD3_k127_2850808_1 Amidophosphoribosyltransferase K00764 - 2.4.2.14 1.027e-281 878.0
SYD3_k127_2850808_10 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000004931 245.0
SYD3_k127_2850808_11 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K21345 - 2.7.7.70 0.00000000000000000000000000000000000000000000000004045 183.0
SYD3_k127_2850808_12 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000006721 177.0
SYD3_k127_2850808_13 Rhomboid family K09650 - 3.4.21.105 0.00000000000000000000000000000000000000000006012 167.0
SYD3_k127_2850808_14 Protein of unknown function, DUF393 - - - 0.00000000000000000000003254 103.0
SYD3_k127_2850808_15 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000001775 51.0
SYD3_k127_2850808_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 9.113e-225 707.0
SYD3_k127_2850808_3 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 580.0
SYD3_k127_2850808_4 Protein of unknown function (DUF819) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 567.0
SYD3_k127_2850808_5 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 482.0
SYD3_k127_2850808_6 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008752 314.0
SYD3_k127_2850808_7 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 302.0
SYD3_k127_2850808_8 TPR repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003433 300.0
SYD3_k127_2850808_9 C4-type zinc ribbon domain K07164 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003927 271.0
SYD3_k127_2857356_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 6.27e-308 959.0
SYD3_k127_2857356_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 3.889e-237 758.0
SYD3_k127_2857356_2 Endoribonuclease that initiates mRNA decay K18682 - - 7.743e-232 728.0
SYD3_k127_2857356_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004167 533.0
SYD3_k127_2857356_4 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000113 187.0
SYD3_k127_2857356_5 Thioredoxin - - - 0.000000000000000000000000000000000000000000000000009342 184.0
SYD3_k127_2857356_6 Outer membrane protein Omp28 - - - 0.00000000000000000000000000000000000000000000000003141 189.0
SYD3_k127_2857356_7 Chloramphenicol acetyltransferase K19271 - 2.3.1.28 0.0000000000000000000000000000001377 129.0
SYD3_k127_2857356_8 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000005278 66.0
SYD3_k127_2918174_0 COG3209 Rhs family protein - - - 0.0000000000000000000000000000000000000003975 169.0
SYD3_k127_2918174_1 Protein of unknown function (DUF433) - - - 0.0000000000000000000001198 99.0
SYD3_k127_2918174_2 COG3209 Rhs family protein - - - 0.0000000001607 66.0
SYD3_k127_2918174_3 WD40-like Beta Propeller Repeat - - - 0.000000008143 64.0
SYD3_k127_296595_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 7.6e-234 731.0
SYD3_k127_296595_1 peptidase S9 prolyl oligopeptidase active site domain protein - - - 2.02e-233 752.0
SYD3_k127_296595_2 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009293 513.0
SYD3_k127_296595_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004848 473.0
SYD3_k127_296595_4 PFAM Alcohol dehydrogenase GroES-like domain K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001804 288.0
SYD3_k127_296595_5 MGS-like domain K01734 - 4.2.3.3 0.00000000000000000000000000000000000000000000287 168.0
SYD3_k127_296595_6 - - - - 0.0000000000000000000000116 103.0
SYD3_k127_296595_7 - - - - 0.00000000000000004649 83.0
SYD3_k127_296595_8 - - - - 0.000000000000514 78.0
SYD3_k127_2974467_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 2.148e-310 969.0
SYD3_k127_2974467_1 MoeZ MoeB domain K21029,K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009827 541.0
SYD3_k127_2974467_10 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.0000000000000000000009762 97.0
SYD3_k127_2974467_11 PFAM thiamineS protein K03636 - - 0.00000000000000000004977 94.0
SYD3_k127_2974467_13 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01697,K01738,K12339 - 2.5.1.47,4.2.1.22 0.000000000004022 68.0
SYD3_k127_2974467_2 LmbE family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004882 518.0
SYD3_k127_2974467_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006343 379.0
SYD3_k127_2974467_4 PFAM MazG nucleotide pyrophosphohydrolase K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 362.0
SYD3_k127_2974467_5 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003801 350.0
SYD3_k127_2974467_6 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000001835 220.0
SYD3_k127_2974467_7 JAB/MPN domain K21140 - 3.13.1.6 0.000000000000000000000000000000002594 133.0
SYD3_k127_2974467_8 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000001047 124.0
SYD3_k127_2997159_0 COG1233 Phytoene dehydrogenase and related K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 2.537e-208 657.0
SYD3_k127_2997159_1 Transport of potassium into the cell K03549 - - 6.046e-202 646.0
SYD3_k127_2997159_10 TIGRFAM lycopene cyclase domain - - - 0.000000000000000000000000000000000000000000000000000002431 201.0
SYD3_k127_2997159_11 membrane K08987 - - 0.000000000000000000000000000000000000000000001167 168.0
SYD3_k127_2997159_12 Conserved repeat domain - - - 0.000000000000000000000000000000000000008117 157.0
SYD3_k127_2997159_13 - - - - 0.0000000000000000000000000000000001836 137.0
SYD3_k127_2997159_14 Protein conserved in bacteria - - - 0.000000000000000000003901 99.0
SYD3_k127_2997159_2 PAP2 superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 622.0
SYD3_k127_2997159_3 Phosphoesterase PA-phosphatase related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 530.0
SYD3_k127_2997159_4 Squalene phytoene synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 363.0
SYD3_k127_2997159_5 signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 324.0
SYD3_k127_2997159_6 PFAM Phosphatidic acid phosphatase type 2 haloperoxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003425 310.0
SYD3_k127_2997159_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006588 282.0
SYD3_k127_2997159_8 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009133 269.0
SYD3_k127_2997159_9 Beta-carotene hydroxylase K15746 - 1.14.15.24 0.0000000000000000000000000000000000000000000000000000001653 198.0
SYD3_k127_300778_0 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 576.0
SYD3_k127_300778_1 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006208 424.0
SYD3_k127_300778_2 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000004354 246.0
SYD3_k127_3021766_0 COG2373 Large extracellular alpha-helical protein - - - 0.0 1417.0
SYD3_k127_3021766_1 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000877 371.0
SYD3_k127_3021766_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009162 349.0
SYD3_k127_3021766_3 Belongs to the ABC transporter superfamily K02031,K02032,K13896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001033 282.0
SYD3_k127_3021766_4 Domain of unknown function (DUF697) - - - 0.000000000000000000000000000000000000000000000000000000000000000004517 231.0
SYD3_k127_3021766_5 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000001701 178.0
SYD3_k127_3021766_6 YjbR - - - 0.0000000000000000000000000000000000000000001315 161.0
SYD3_k127_3021766_7 Sterol-binding domain protein - - - 0.000000000000000000000000000004248 122.0
SYD3_k127_3021766_8 Serine protease, subtilase family - - - 0.00000000000000000000000000319 117.0
SYD3_k127_3021766_9 Tetratricopeptide repeat - - - 0.000000000000009649 84.0
SYD3_k127_3035916_0 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 591.0
SYD3_k127_3035916_1 - - - - 0.000000000000000000000000000001621 133.0
SYD3_k127_3104948_0 PFAM Peptidase M56, BlaR1 - - - 0.000000000000000000000000000000000000000000000000000000000000001439 243.0
SYD3_k127_3104948_1 Transcriptional repressor, CopY family - - - 0.0000000000000000000000000000000000000001513 153.0
SYD3_k127_3112999_0 agmatine deiminase activity K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 501.0
SYD3_k127_3112999_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 481.0
SYD3_k127_3112999_2 amidohydrolase K20810 - 3.5.4.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 451.0
SYD3_k127_3112999_3 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000002075 234.0
SYD3_k127_3112999_4 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000005173 210.0
SYD3_k127_3112999_5 Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein. - - - 0.0002775 54.0
SYD3_k127_311729_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K01929 - 5.1.1.1,6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005483 474.0
SYD3_k127_311729_1 O-Antigen ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002477 273.0
SYD3_k127_311729_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000000000000000005014 221.0
SYD3_k127_311729_3 Protein of unknown function (DUF2480) - - - 0.00000000000000000000000000000000000000000000000000000004058 200.0
SYD3_k127_311729_5 - - - - 0.0001992 53.0
SYD3_k127_3161269_0 Multicopper oxidase - - - 1.053e-319 991.0
SYD3_k127_3161269_1 domain protein - - - 4.522e-245 781.0
SYD3_k127_3161269_10 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000161 164.0
SYD3_k127_3161269_11 Methyltransferase FkbM domain - - - 0.0000000000000000000000000000000000000000008278 169.0
SYD3_k127_3161269_12 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000004348 171.0
SYD3_k127_3161269_13 - - - - 0.00000000000000000000000000000000000001625 150.0
SYD3_k127_3161269_14 PFAM YceI-like domain - - - 0.0000000000000000000000000000000002922 139.0
SYD3_k127_3161269_15 - - - - 0.0000000000000000000000000001029 119.0
SYD3_k127_3161269_16 Protein of unknown function (DUF3347) - - - 0.000000000000000000000000003485 116.0
SYD3_k127_3161269_17 N-acetyltransferase activity K19001 GO:0003674,GO:0003824,GO:0008080,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747 - 0.000000000000000000000000005799 116.0
SYD3_k127_3161269_18 mercury ion transmembrane transporter activity - - - 0.00000000000000000000000006123 108.0
SYD3_k127_3161269_19 Protein of unknown function (DUF1778) - - - 0.000000008645 61.0
SYD3_k127_3161269_2 Cystathionine beta-lyase K01758,K01760 - 4.4.1.1,4.4.1.8 7.431e-202 634.0
SYD3_k127_3161269_20 CarboxypepD_reg-like domain - - - 0.000006208 59.0
SYD3_k127_3161269_21 Legume lectin domain - - - 0.0007293 49.0
SYD3_k127_3161269_3 Homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005701 552.0
SYD3_k127_3161269_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008312 490.0
SYD3_k127_3161269_5 Esterase PHB depolymerase K03932 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 364.0
SYD3_k127_3161269_6 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002239 291.0
SYD3_k127_3161269_7 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000244 269.0
SYD3_k127_3161269_8 Alpha-acetolactate decarboxylase K01575 - 4.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000002404 263.0
SYD3_k127_3161269_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007101 244.0
SYD3_k127_3228654_0 Belongs to the glycosyl hydrolase 28 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000237 507.0
SYD3_k127_3228654_2 PFAM Pentapeptide repeats (8 copies) - - - 0.000000000000000004766 96.0
SYD3_k127_3228654_3 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.000000000000004415 75.0
SYD3_k127_3257141_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 8.188e-237 739.0
SYD3_k127_3257141_1 Na+/Pi-cotransporter K03324 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004434 304.0
SYD3_k127_3257141_2 COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002721 279.0
SYD3_k127_3257141_3 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000000000000000000000000000000000001521 214.0
SYD3_k127_3257141_4 tail collar domain protein - - - 0.00000000000000000000000000000000000000004789 168.0
SYD3_k127_3257141_5 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000005787 133.0
SYD3_k127_3257141_6 COG0607 Rhodanese-related sulfurtransferase - - - 0.000000000000000000000004903 106.0
SYD3_k127_3257141_7 - - - - 0.000000000000000008826 91.0
SYD3_k127_3285048_0 Heat shock protein Hsp90 K04079 - - 5.506e-219 689.0
SYD3_k127_3285048_1 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002864 533.0
SYD3_k127_3287825_0 CinA-like protein K03742,K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 344.0
SYD3_k127_3287825_1 biotin acetyl-CoA-carboxylase ligase K03524 - 6.3.4.15 0.0000000000000000000000000000000000001112 151.0
SYD3_k127_3287825_2 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000000000000335 141.0
SYD3_k127_3328694_0 Protein of unknown function (DUF1800) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 580.0
SYD3_k127_3328694_1 Protein of unknown function (DUF1501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004467 360.0
SYD3_k127_3328694_2 Protein conserved in bacteria K09950 - - 0.00000000000000000000000000000000000000000000000000000006073 200.0
SYD3_k127_3328694_3 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000003644 110.0
SYD3_k127_3328694_4 Belongs to the peptidase S8 family - - - 0.0004873 46.0
SYD3_k127_338155_0 SnoaL-like domain - - - 3.53e-255 821.0
SYD3_k127_338155_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 503.0
SYD3_k127_338155_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009526 478.0
SYD3_k127_338155_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004621 331.0
SYD3_k127_338155_4 6-pyruvoyl tetrahydropterin synthase QueD family protein K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000000006706 191.0
SYD3_k127_338155_5 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000007542 192.0
SYD3_k127_338155_6 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000004504 195.0
SYD3_k127_338155_7 Phosphate acyltransferases - - - 0.000000000000000000000000006336 123.0
SYD3_k127_338155_9 Protein of unknown function (DUF2911) - - - 0.00000004088 55.0
SYD3_k127_3389145_0 Peptidase S46 - - - 1.449e-249 789.0
SYD3_k127_3389145_1 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007623 380.0
SYD3_k127_3389145_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000389 249.0
SYD3_k127_3389145_3 cellulase activity - - - 0.000000000000000000000000000000000000000000000000000000000002231 240.0
SYD3_k127_3389145_4 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000001646 121.0
SYD3_k127_3389145_5 metallopeptidase activity K12287 - - 0.0000000000000000001047 106.0
SYD3_k127_343332_0 Mate efflux family protein K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 553.0
SYD3_k127_343332_1 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000001875 209.0
SYD3_k127_343332_2 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000002284 199.0
SYD3_k127_343332_3 - - - - 0.00000000000000000000000000000001524 132.0
SYD3_k127_344439_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278 - 3.4.14.5 5.347e-293 918.0
SYD3_k127_344439_1 Asparaginyl-tRNA synthetase K01893 - 6.1.1.22 1.845e-227 712.0
SYD3_k127_344439_10 GDYXXLXY protein - - - 0.0000000000000004847 85.0
SYD3_k127_344439_11 - - - - 0.0000000000006127 77.0
SYD3_k127_344439_12 Oxygen tolerance - - - 0.0009916 48.0
SYD3_k127_344439_2 Predicted membrane protein (DUF2157) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 408.0
SYD3_k127_344439_3 Ion channel K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004051 259.0
SYD3_k127_344439_4 ECF sigma factor K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004378 244.0
SYD3_k127_344439_5 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000003016 187.0
SYD3_k127_344439_6 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.0000000000000000000000000000000000000000000002882 170.0
SYD3_k127_344439_7 Oxygen tolerance - - - 0.0000000000000000000000000000000000000000003286 178.0
SYD3_k127_344439_9 TPR repeat-containing protein - - - 0.000000000000000001849 100.0
SYD3_k127_349809_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.0 1010.0
SYD3_k127_349809_1 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 290.0
SYD3_k127_349809_2 PFAM Phosphoesterase, HXTX - - - 0.0000000000000000000000001166 113.0
SYD3_k127_349809_3 Tetratricopeptide repeat - - - 0.00000000004377 73.0
SYD3_k127_3568827_0 TonB-dependent receptor - - - 2.687e-229 740.0
SYD3_k127_3568827_1 PHP domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006942 504.0
SYD3_k127_3568827_2 PLD-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004936 377.0
SYD3_k127_3568827_3 Endonuclease exonuclease phosphatase family - - - 0.000000000000000000000000000000000000000002323 161.0
SYD3_k127_3568827_4 Preprotein translocase subunit K03210 - - 0.0000000000000000001624 93.0
SYD3_k127_3770348_0 TamB, inner membrane protein subunit of TAM complex - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 424.0
SYD3_k127_3770348_1 - - - - 0.0000001093 63.0
SYD3_k127_3789103_0 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006171 293.0
SYD3_k127_3789103_1 Gliding motility-associated C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000005731 241.0
SYD3_k127_3789103_2 Phosphate acyltransferases - - - 0.00000002709 57.0
SYD3_k127_3789103_3 metallopeptidase activity K01126,K01181,K01337 - 3.1.4.46,3.2.1.8,3.4.21.50 0.0000007504 63.0
SYD3_k127_3825646_0 Pfam Phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 560.0
SYD3_k127_3825646_1 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 507.0
SYD3_k127_3825646_2 PFAM PKD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 456.0
SYD3_k127_3825646_3 PFAM Cation efflux - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006531 292.0
SYD3_k127_3825646_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002628 295.0
SYD3_k127_3825646_5 PFAM Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002005 246.0
SYD3_k127_3825646_6 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000004206 109.0
SYD3_k127_3825646_7 Lipocalin-like domain - - - 0.000000000006848 71.0
SYD3_k127_3830260_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1287.0
SYD3_k127_3830260_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 1.503e-214 672.0
SYD3_k127_3830260_10 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000004977 144.0
SYD3_k127_3830260_11 Belongs to the P-Pant transferase superfamily - - - 0.000000000000000000000001418 111.0
SYD3_k127_3830260_12 Pasta domain K01921,K08884,K12132 - 2.7.11.1,6.3.2.4 0.000000000000000000000001964 114.0
SYD3_k127_3830260_13 acr, cog1399 - - - 0.000000000000000000003441 100.0
SYD3_k127_3830260_14 Rhodanese Homology Domain - - - 0.0000000000000000001117 92.0
SYD3_k127_3830260_15 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000531 85.0
SYD3_k127_3830260_2 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006617 452.0
SYD3_k127_3830260_3 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005675 387.0
SYD3_k127_3830260_4 Deoxycytidine triphosphate deaminase K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003966 290.0
SYD3_k127_3830260_5 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001474 267.0
SYD3_k127_3830260_6 domain, Protein K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003835 278.0
SYD3_k127_3830260_7 photosynthesis - - - 0.000000000000000000000000000000000000000000000003843 184.0
SYD3_k127_3830260_8 TIGRFAM endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000004675 161.0
SYD3_k127_3830260_9 Two component transcriptional regulator, LuxR family - - - 0.0000000000000000000000000000000000000474 151.0
SYD3_k127_3913974_0 DNA polymerase K02337,K14162 - 2.7.7.7 3.179e-296 928.0
SYD3_k127_3913974_1 COG1961 Site-specific recombinases, DNA invertase Pin homologs K06400 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 516.0
SYD3_k127_3913974_10 - - - - 0.00007211 49.0
SYD3_k127_3913974_2 chelatase, subunit chli K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 508.0
SYD3_k127_3913974_3 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008354 357.0
SYD3_k127_3913974_4 Domain of unknown function (DUF4143) K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009665 354.0
SYD3_k127_3913974_5 ABC-type Na efflux pump, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 354.0
SYD3_k127_3913974_6 peptide-methionine (S)-S-oxide reductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008159 276.0
SYD3_k127_3913974_7 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004222 289.0
SYD3_k127_3913974_8 Transposase IS200 like - - - 0.000000000000000000000000000000000000000000000000193 180.0
SYD3_k127_3913974_9 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.0000000000000000000000000000000002059 135.0
SYD3_k127_3929748_0 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004408 366.0
SYD3_k127_3978986_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 569.0
SYD3_k127_3978986_1 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P) K07094 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004645 308.0
SYD3_k127_3978986_2 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 293.0
SYD3_k127_4024611_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 1.349e-241 753.0
SYD3_k127_4024611_1 Cystathionine beta-synthase K01697 - 4.2.1.22 7.377e-221 692.0
SYD3_k127_4024611_10 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 319.0
SYD3_k127_4024611_11 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000267 277.0
SYD3_k127_4024611_12 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007601 258.0
SYD3_k127_4024611_13 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000745 230.0
SYD3_k127_4024611_14 Type IX secretion system membrane protein PorP/SprF - - - 0.00000000000000000000000000000000000000000000000000000000000003126 227.0
SYD3_k127_4024611_15 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000007052 222.0
SYD3_k127_4024611_16 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000005863 206.0
SYD3_k127_4024611_17 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000002501 220.0
SYD3_k127_4024611_18 - - - - 0.00000000000000000000000000000000000000000000000000007838 197.0
SYD3_k127_4024611_19 Pfam:Methyltransf_26 K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.0000000000000000000000000000000000000000000000000287 190.0
SYD3_k127_4024611_2 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 480.0
SYD3_k127_4024611_20 Polysaccharide biosynthesis C-terminal domain - - - 0.00000000000000000000000000000000000000000000003394 186.0
SYD3_k127_4024611_21 Domain of unknown function (DUF3127) - - - 0.0000000000000000000000000000000000006983 142.0
SYD3_k127_4024611_22 cytidine and deoxycytidylate deaminase K01489 - 3.5.4.5 0.000000000000000000000000000000000005839 142.0
SYD3_k127_4024611_24 - - - - 0.00000000000000000000000000000001588 134.0
SYD3_k127_4024611_25 anaphase-promoting complex binding - - - 0.000000000000000000000000000009166 132.0
SYD3_k127_4024611_26 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) K15460 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016426,GO:0016430,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.223 0.00000000000000000000000001414 118.0
SYD3_k127_4024611_27 IMG reference gene - - - 0.00000000000000000956 98.0
SYD3_k127_4024611_28 cytochrome C K00368,K00405 - 1.7.2.1 0.0000000000000001154 86.0
SYD3_k127_4024611_29 PFAM Peptidoglycan-binding lysin domain - - - 0.00000000001836 74.0
SYD3_k127_4024611_3 SPTR CHU large protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007871 507.0
SYD3_k127_4024611_30 Cytochrome c biogenesis protein transmembrane region K06196 - - 0.000000006017 69.0
SYD3_k127_4024611_31 ketosteroid isomerase - - - 0.0000002489 60.0
SYD3_k127_4024611_32 - - - - 0.000000635 57.0
SYD3_k127_4024611_33 Redoxin - - - 0.00000153 61.0
SYD3_k127_4024611_4 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 438.0
SYD3_k127_4024611_5 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007152 430.0
SYD3_k127_4024611_6 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 390.0
SYD3_k127_4024611_7 regulation of response to stimulus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 397.0
SYD3_k127_4024611_8 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005812 315.0
SYD3_k127_4024611_9 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009628 303.0
SYD3_k127_4029909_0 Long-chain acyl-CoA synthetases (AMP-forming) K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 539.0
SYD3_k127_4038003_0 PFAM Peptidase family M20 M25 M40 K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008044 503.0
SYD3_k127_4038003_1 Saccharopine dehydrogenase C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 469.0
SYD3_k127_4038003_2 Hydroxymethylglutaryl-CoA lyase K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 430.0
SYD3_k127_4038003_3 Protein of unknown function (DUF962) - - - 0.00000000000000000000000000000000000000000000007019 173.0
SYD3_k127_4038003_4 glycosyl transferase family 2 - - - 0.00003872 46.0
SYD3_k127_407696_0 Chaperone of endosialidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 439.0
SYD3_k127_407696_1 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000006097 159.0
SYD3_k127_407696_2 Histidine kinase - - - 0.00000000000000000000000000003777 136.0
SYD3_k127_4082091_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 1.776e-200 640.0
SYD3_k127_4082091_1 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 477.0
SYD3_k127_4082091_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 471.0
SYD3_k127_4082091_3 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005213 278.0
SYD3_k127_4082091_4 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001658 278.0
SYD3_k127_4082091_5 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005235 270.0
SYD3_k127_4082091_6 ribosomal pseudouridine synthase C, large subunit K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.0000000000000000000000000000000001504 135.0
SYD3_k127_4082091_7 - - - - 0.0003575 48.0
SYD3_k127_4102127_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007097 380.0
SYD3_k127_4102127_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000384 304.0
SYD3_k127_4102127_2 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002533 272.0
SYD3_k127_4102127_3 PFAM Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000002313 154.0
SYD3_k127_4114518_0 NAD dependent epimerase dehydratase family K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 550.0
SYD3_k127_4114518_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005686 529.0
SYD3_k127_4114518_2 export protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 518.0
SYD3_k127_4114518_3 3-Deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006861 294.0
SYD3_k127_4114518_4 Probable RNA and SrmB- binding site of polymerase A K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000002819 261.0
SYD3_k127_4114518_5 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000002551 206.0
SYD3_k127_4114518_6 - - - - 0.00000000000000000000000000000000000000001561 162.0
SYD3_k127_4139246_0 metallophosphoesterase - - - 9.874e-207 677.0
SYD3_k127_4139246_1 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 338.0
SYD3_k127_4139246_2 Glutaminase K01425 - 3.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003479 337.0
SYD3_k127_4139246_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001633 266.0
SYD3_k127_4139246_4 epimerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004116 247.0
SYD3_k127_4139246_5 SPTR Cell surface protein - - - 0.000000000000000000000000000001448 138.0
SYD3_k127_4139246_6 Parallel beta-helix repeats - - - 0.0000000000000000000006211 113.0
SYD3_k127_4139246_7 - - - - 0.00000000001016 68.0
SYD3_k127_4139246_8 Activator of 90 kDa heat shock protein - GO:0001671,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008047,GO:0008150,GO:0030234,GO:0031072,GO:0032781,GO:0043085,GO:0043462,GO:0044093,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051087,GO:0051336,GO:0051345,GO:0051879,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0098772 - 0.00000000001879 70.0
SYD3_k127_4139246_9 regulation of response to stimulus - - - 0.00005437 56.0
SYD3_k127_4159708_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000534 569.0
SYD3_k127_4159708_1 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007033 502.0
SYD3_k127_4159708_2 amidohydrolase K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008858 439.0
SYD3_k127_4159708_3 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 330.0
SYD3_k127_4159708_4 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006477 245.0
SYD3_k127_4159708_5 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627 - 2.3.1.12 0.00000000002794 63.0
SYD3_k127_4170432_0 of the AAA class - - - 0.0 1166.0
SYD3_k127_4170432_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1049.0
SYD3_k127_4170432_10 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005034 581.0
SYD3_k127_4170432_11 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 520.0
SYD3_k127_4170432_12 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 497.0
SYD3_k127_4170432_13 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 484.0
SYD3_k127_4170432_14 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 474.0
SYD3_k127_4170432_15 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 470.0
SYD3_k127_4170432_16 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 456.0
SYD3_k127_4170432_17 Cysteine desulfurase K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 404.0
SYD3_k127_4170432_18 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 389.0
SYD3_k127_4170432_19 agmatine deiminase activity K08589,K10536 GO:0003674,GO:0003824,GO:0004175,GO:0004197,GO:0004198,GO:0005488,GO:0005509,GO:0005575,GO:0005576,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0016787,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.22.37,3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 380.0
SYD3_k127_4170432_2 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 8.935e-288 895.0
SYD3_k127_4170432_20 DNA polymerase III K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 374.0
SYD3_k127_4170432_21 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 364.0
SYD3_k127_4170432_22 cytochrome C peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 362.0
SYD3_k127_4170432_23 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 323.0
SYD3_k127_4170432_24 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005043 319.0
SYD3_k127_4170432_25 SprB repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 334.0
SYD3_k127_4170432_26 Orotidine 5''-phosphate decarboxylase K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006498 296.0
SYD3_k127_4170432_27 PFAM D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000008784 271.0
SYD3_k127_4170432_28 Conserved repeat domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003094 263.0
SYD3_k127_4170432_29 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000001462 250.0
SYD3_k127_4170432_3 SPTR ASPIC UnbV domain protein - - - 7.066e-279 895.0
SYD3_k127_4170432_30 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000002149 229.0
SYD3_k127_4170432_31 RNA methyltransferase TrmH family - - - 0.000000000000000000000000000000000000000000000000000000001563 205.0
SYD3_k127_4170432_32 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000003835 193.0
SYD3_k127_4170432_33 AhpC/TSA family - - - 0.000000000000000000000000000000000000000000000001239 179.0
SYD3_k127_4170432_34 PFAM Peptidoglycan-binding lysin domain - - - 0.000000000000000000000000000000000000000000000001918 177.0
SYD3_k127_4170432_35 Phosphoesterase PA-phosphatase related K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000000005393 173.0
SYD3_k127_4170432_36 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000001096 169.0
SYD3_k127_4170432_37 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000007283 150.0
SYD3_k127_4170432_38 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000006597 136.0
SYD3_k127_4170432_39 Redoxin - - - 0.000000000000000000000000000001026 141.0
SYD3_k127_4170432_4 SPTR ASPIC UnbV domain protein - - - 1.391e-276 888.0
SYD3_k127_4170432_41 NifU-like domain - - - 0.00000000000000000000000002129 110.0
SYD3_k127_4170432_43 Protein of unknown function (DUF983) - - - 0.0000000000000000000005841 100.0
SYD3_k127_4170432_46 - - - - 0.000000001483 70.0
SYD3_k127_4170432_47 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000008033 55.0
SYD3_k127_4170432_48 Parallel beta-helix repeats - - - 0.00001377 57.0
SYD3_k127_4170432_5 SPTR ASPIC UnbV domain protein - - - 1.922e-260 844.0
SYD3_k127_4170432_6 Belongs to the peptidase M16 family K07263 - - 7.053e-230 745.0
SYD3_k127_4170432_7 COGs COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 9.53e-226 721.0
SYD3_k127_4170432_8 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 610.0
SYD3_k127_4170432_9 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 628.0
SYD3_k127_4187735_0 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009515 403.0
SYD3_k127_4187735_1 OmpA MotB domain protein K03286 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 382.0
SYD3_k127_4187735_2 Belongs to the arginase family K01479 - 3.5.3.8 0.0000000000000000000000000000000000002086 153.0
SYD3_k127_4187735_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000006158 98.0
SYD3_k127_4196060_0 FAD linked oxidases, C-terminal domain - - - 6.229e-291 921.0
SYD3_k127_4196060_1 Glutamate formimidoyltransferase K00603,K13990 - 2.1.2.5,4.3.1.4 3.716e-218 690.0
SYD3_k127_4196060_10 S23 ribosomal protein - - - 0.00000000000000000000000000000000000000000001002 164.0
SYD3_k127_4196060_11 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K07443 - 2.1.1.63 0.00000000000000000000000000000000002702 137.0
SYD3_k127_4196060_12 Glycosyltransferase like family 2 - - - 0.000000000000000000001824 105.0
SYD3_k127_4196060_13 Putative beta-lactamase-inhibitor-like, PepSY-like - - - 0.00000003045 62.0
SYD3_k127_4196060_14 Putative beta-lactamase-inhibitor-like, PepSY-like - - - 0.0000003718 58.0
SYD3_k127_4196060_15 COG3209 Rhs family protein - - - 0.000122 54.0
SYD3_k127_4196060_2 Glycogen debranching enzyme - - - 3.602e-202 648.0
SYD3_k127_4196060_3 AP endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 523.0
SYD3_k127_4196060_4 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004805 525.0
SYD3_k127_4196060_5 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 347.0
SYD3_k127_4196060_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 302.0
SYD3_k127_4196060_7 COGs COG0663 Carbonic anhydrase acetyltransferase isoleucine patch superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001238 245.0
SYD3_k127_4196060_8 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000136 213.0
SYD3_k127_4196060_9 - - - - 0.0000000000000000000000000000000000000000000000000000004406 206.0
SYD3_k127_4197832_0 Carbamoyl-phosphate synthase K01955 - 6.3.5.5 0.0 1568.0
SYD3_k127_4197832_1 - - - - 0.0 1286.0
SYD3_k127_4197832_10 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000008623 216.0
SYD3_k127_4197832_11 Pfam Polyketide cyclase dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000002298 209.0
SYD3_k127_4197832_12 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000005053 203.0
SYD3_k127_4197832_13 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000112 196.0
SYD3_k127_4197832_14 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family K02503 - - 0.00000000000000000000000000000000000000000000004747 172.0
SYD3_k127_4197832_15 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000000000001458 168.0
SYD3_k127_4197832_16 Protein of unknown function (DUF3299) K09950 - - 0.00000000000000000000000000000000000001032 150.0
SYD3_k127_4197832_17 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000001201 135.0
SYD3_k127_4197832_18 metallopeptidase activity K09933 - - 0.00000000000000002585 92.0
SYD3_k127_4197832_19 - - - - 0.000000005031 60.0
SYD3_k127_4197832_2 Carboxypeptidase regulatory-like domain - - - 0.0 1151.0
SYD3_k127_4197832_3 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004056 392.0
SYD3_k127_4197832_4 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 373.0
SYD3_k127_4197832_5 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 367.0
SYD3_k127_4197832_6 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004148 346.0
SYD3_k127_4197832_7 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001749 285.0
SYD3_k127_4197832_8 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000003468 247.0
SYD3_k127_4197832_9 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001085 239.0
SYD3_k127_4201296_0 SPTR CHU large protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 499.0
SYD3_k127_4201296_1 Protein of unknown function (DUF4256) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001375 276.0
SYD3_k127_4201296_2 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000004189 217.0
SYD3_k127_4201296_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000004876 212.0
SYD3_k127_4201296_4 ArsR family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000009817 187.0
SYD3_k127_4201296_5 DoxX-like family - - - 0.0000000000000000000000000000000000000000000000001336 179.0
SYD3_k127_4201296_6 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000002566 80.0
SYD3_k127_4212770_0 DNA photolyase K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 421.0
SYD3_k127_4212770_1 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000003883 245.0
SYD3_k127_4250815_0 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009316 389.0
SYD3_k127_4250815_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007079 284.0
SYD3_k127_4250815_2 PFAM histidine kinase internal region - - - 0.00000000000000000000000000000000000000000000000000000000002572 218.0
SYD3_k127_4265995_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1223.0
SYD3_k127_4265995_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 6.306e-204 641.0
SYD3_k127_4265995_10 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 296.0
SYD3_k127_4265995_11 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007165 290.0
SYD3_k127_4265995_12 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002137 271.0
SYD3_k127_4265995_13 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000009215 255.0
SYD3_k127_4265995_14 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000004908 239.0
SYD3_k127_4265995_15 Forms part of the polypeptide exit tunnel K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000001278 242.0
SYD3_k127_4265995_16 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000007143 228.0
SYD3_k127_4265995_17 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000007133 217.0
SYD3_k127_4265995_18 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000002859 208.0
SYD3_k127_4265995_19 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000144 204.0
SYD3_k127_4265995_2 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 5.586e-195 617.0
SYD3_k127_4265995_20 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000003203 198.0
SYD3_k127_4265995_21 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000008655 197.0
SYD3_k127_4265995_22 COG3279 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000000000000000000000000000000006244 199.0
SYD3_k127_4265995_23 ribosomal protein l17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000004757 188.0
SYD3_k127_4265995_24 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000006752 185.0
SYD3_k127_4265995_25 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000001172 179.0
SYD3_k127_4265995_26 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000139 172.0
SYD3_k127_4265995_27 PFAM Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000554 166.0
SYD3_k127_4265995_28 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000007068 163.0
SYD3_k127_4265995_29 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000002963 150.0
SYD3_k127_4265995_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008153 544.0
SYD3_k127_4265995_30 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000003788 149.0
SYD3_k127_4265995_31 Histidine kinase - - - 0.00000000000000000000000000000000000008293 162.0
SYD3_k127_4265995_32 Histidine kinase - - - 0.000000000000000000000000000000000002105 147.0
SYD3_k127_4265995_33 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.00000000000000000000000000000000001062 136.0
SYD3_k127_4265995_34 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000002062 138.0
SYD3_k127_4265995_35 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000003879 137.0
SYD3_k127_4265995_36 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000000000002031 131.0
SYD3_k127_4265995_37 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000001699 124.0
SYD3_k127_4265995_38 Belongs to the universal ribosomal protein uL29 family K02904 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000004163 103.0
SYD3_k127_4265995_39 cellulose binding - - - 0.00000000000000009216 93.0
SYD3_k127_4265995_4 Belongs to the CarA family K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 490.0
SYD3_k127_4265995_40 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) K02907 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000003992 76.0
SYD3_k127_4265995_41 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000000004927 74.0
SYD3_k127_4265995_42 chitinase - - - 0.0000000000009285 72.0
SYD3_k127_4265995_43 Septum formation inhibitor - - - 0.000001046 53.0
SYD3_k127_4265995_5 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 407.0
SYD3_k127_4265995_6 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003745 397.0
SYD3_k127_4265995_7 PFAM Signal transduction histidine kinase, internal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 401.0
SYD3_k127_4265995_8 Methionine aminopeptidase K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 352.0
SYD3_k127_4265995_9 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005556 317.0
SYD3_k127_426715_0 Sortilin, neurotensin receptor 3, - - - 0.0 1175.0
SYD3_k127_426715_1 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003965 473.0
SYD3_k127_426715_2 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007667 311.0
SYD3_k127_4305288_0 peptidase - - - 6.339e-223 709.0
SYD3_k127_4305288_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008272 273.0
SYD3_k127_4305288_2 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.0000000000000000000000000000000000004406 142.0
SYD3_k127_4324719_0 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004018 586.0
SYD3_k127_4324719_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000172 244.0
SYD3_k127_4324719_2 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000002187 253.0
SYD3_k127_4324719_3 Protein of unknown function (DUF3467) - - - 0.00000000000000000000000000000000000000000001014 166.0
SYD3_k127_4324719_4 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000000000007388 142.0
SYD3_k127_4324719_5 PFAM PspC domain - - - 0.0000000000000004256 80.0
SYD3_k127_4324719_6 Cadherin-like K12549 - - 0.0001627 53.0
SYD3_k127_4324782_0 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008288 549.0
SYD3_k127_4324782_1 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007744 471.0
SYD3_k127_4324782_2 ribonucleoside-diphosphate reductase activity K00525,K21636 - 1.1.98.6,1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006994 456.0
SYD3_k127_4324782_3 Mechanosensitive ion channel K22044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003013 320.0
SYD3_k127_4324782_4 Conserved repeat domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008464 345.0
SYD3_k127_4324782_5 META domain - - - 0.0000000000000000000000000000000000000000000000000000004542 202.0
SYD3_k127_4324782_6 - - - - 0.0000000000000000000000002302 111.0
SYD3_k127_4324782_7 COGs COG2356 Endonuclease I - - - 0.0000000000000000000000003566 123.0
SYD3_k127_4324782_8 HYR domain - - - 0.0000857 56.0
SYD3_k127_4326957_0 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 346.0
SYD3_k127_4326957_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008655 278.0
SYD3_k127_4326957_2 TamB, inner membrane protein subunit of TAM complex - - - 0.0000000000000000000000000000000000000000000000000000002621 218.0
SYD3_k127_4334822_0 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 476.0
SYD3_k127_4334822_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 330.0
SYD3_k127_4334822_2 competence protein COMEC - - - 0.00000000000000000000000000000000000000000000000003426 196.0
SYD3_k127_4334822_3 COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes K06131 - - 0.000000000000000000000000000206 135.0
SYD3_k127_4334822_5 - - - - 0.000000000000004861 91.0
SYD3_k127_4334822_6 - - - - 0.00000000000005592 73.0
SYD3_k127_4334822_8 D-alanyl-D-alanine carboxypeptidase - - - 0.0001541 56.0
SYD3_k127_4342503_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 2.983e-220 703.0
SYD3_k127_4342503_1 Bacterial protein of unknown function (DUF853) K06915 - - 1.625e-213 674.0
SYD3_k127_4342503_2 PFAM NAD dependent epimerase dehydratase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007557 391.0
SYD3_k127_4342503_3 DNA mismatch repair protein MutT K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 336.0
SYD3_k127_4342503_4 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008679 293.0
SYD3_k127_4342503_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001667 292.0
SYD3_k127_4342503_6 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000000000000000000000002838 210.0
SYD3_k127_4342503_8 iron ion homeostasis K04758 - - 0.00001315 51.0
SYD3_k127_4373541_0 Beta-eliminating lyase - - - 2.292e-240 748.0
SYD3_k127_4373541_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004643 450.0
SYD3_k127_4373541_2 Beta-eliminating lyase K01667 - 4.1.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 304.0
SYD3_k127_4373541_3 Two component transcriptional regulator, LytTR family K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000004151 228.0
SYD3_k127_4373541_5 Hep Hag repeat protein - - - 0.000000000000000001138 102.0
SYD3_k127_4373541_6 TIGRFAM Por secretion system C-terminal sorting domain - - - 0.000002956 60.0
SYD3_k127_4375372_0 PFAM Phosphatidic acid phosphatase type 2 haloperoxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003548 345.0
SYD3_k127_4375372_1 Phenylacetic acid catabolic protein K02611 - 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000299 295.0
SYD3_k127_4375372_2 TIGRFAM phenylacetate-CoA oxygenase, PaaJ subunit K02612 GO:0006082,GO:0006725,GO:0006805,GO:0008150,GO:0008152,GO:0009056,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016054,GO:0019439,GO:0019748,GO:0019752,GO:0032787,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0050896,GO:0051716,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0098754,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000000000000000000000000000000000000005877 179.0
SYD3_k127_4381501_0 Conserved repeat domain - - - 5.6e-230 751.0
SYD3_k127_4381501_1 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 514.0
SYD3_k127_4381501_2 Synthesizes selenophosphate from selenide and ATP K01008 GO:0000287,GO:0001887,GO:0003674,GO:0003824,GO:0004756,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009451,GO:0009987,GO:0010467,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016781,GO:0019752,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0070329,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 400.0
SYD3_k127_4381501_3 Rhodanese-like domain K06917 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009251 304.0
SYD3_k127_4381501_4 Domain of unknown function (DUF4918) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004583 245.0
SYD3_k127_4381501_5 Ferrous iron transport protein B K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000001863 227.0
SYD3_k127_4381501_6 Exonuclease - - - 0.000000000000000000000000000000000000000000000008761 177.0
SYD3_k127_4381501_7 phospholipase Carboxylesterase - - - 0.0000000000000000000000000000000000000000000673 171.0
SYD3_k127_4381501_8 Lamin Tail Domain - - - 0.0000002007 58.0
SYD3_k127_4388128_0 Cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 396.0
SYD3_k127_4388128_1 Methionine synthase K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0019842,GO:0031419,GO:0032259,GO:0034641,GO:0035999,GO:0036094,GO:0036211,GO:0042084,GO:0042558,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050667,GO:0051186,GO:0071704,GO:0097159,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 306.0
SYD3_k127_4388128_2 - - - - 0.0000000000000000000000000000003242 129.0
SYD3_k127_4388128_3 YtxH-like protein - - - 0.0000000000002633 73.0
SYD3_k127_4388128_4 Glucose / Sorbosone dehydrogenase - - - 0.000000212 57.0
SYD3_k127_4406558_0 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 558.0
SYD3_k127_4406558_1 TonB-dependent Receptor Plug K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537 321.0
SYD3_k127_4406558_2 Response regulator of the LytR AlgR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001559 279.0
SYD3_k127_4406558_3 regulator of cell autolysis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001744 276.0
SYD3_k127_4406558_4 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000001785 175.0
SYD3_k127_4406558_5 PAP2 superfamily - - - 0.00000000000000000000000003966 111.0
SYD3_k127_4445102_0 spore germination - - - 0.0000000000000000000000000000000000000000000000000000000000000000339 232.0
SYD3_k127_4446526_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1369.0
SYD3_k127_4446526_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 1.204e-242 766.0
SYD3_k127_4446526_2 tryptophanase activity K01667 - 4.1.99.1 1.085e-198 625.0
SYD3_k127_4446526_3 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003562 382.0
SYD3_k127_4446526_4 PFAM Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000009491 240.0
SYD3_k127_4446526_5 Fibronectin type 3 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000003495 257.0
SYD3_k127_4446526_6 ORF6N domain - - - 0.0000000000000000000000000000000000000000000000002864 181.0
SYD3_k127_446935_0 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007417 432.0
SYD3_k127_446935_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 352.0
SYD3_k127_446935_2 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007798 369.0
SYD3_k127_446935_3 diphosphomevalonate decarboxylase K01597 - 4.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 326.0
SYD3_k127_446935_4 Acetyltransferase (GNAT) domain K00663 - 2.3.1.82 0.0000000000000000000000000000000000000000000000000000000000000000000000000445 252.0
SYD3_k127_446935_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003134 249.0
SYD3_k127_446935_6 Domain of unknown function (DUF4294) - - - 0.00000000000000000000000000000000000000000000002557 178.0
SYD3_k127_446935_7 Lipopolysaccharide biosynthesis protein - - - 0.0000000000000000002898 100.0
SYD3_k127_4477943_0 Belongs to the PdxA family K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006427 435.0
SYD3_k127_4477943_1 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000457 352.0
SYD3_k127_4477943_10 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000002452 138.0
SYD3_k127_4477943_11 Thermolysin metallopeptidase, catalytic domain K01400 - 3.4.24.28 0.00000000000000000000000000000009457 144.0
SYD3_k127_4477943_12 Cytochrome c - - - 0.000000000000000000002044 98.0
SYD3_k127_4477943_13 heme binding - - - 0.000000000000001063 92.0
SYD3_k127_4477943_2 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008408 335.0
SYD3_k127_4477943_3 PFAM Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 295.0
SYD3_k127_4477943_4 Succinylglutamate desuccinylase / Aspartoacylase family K05526 - 3.5.1.96 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002301 284.0
SYD3_k127_4477943_5 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002033 272.0
SYD3_k127_4477943_6 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001876 265.0
SYD3_k127_4477943_7 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001336 286.0
SYD3_k127_4477943_8 TIGRFAM Por secretion system C-terminal sorting domain - - - 0.00000000000000000000000000000000000000000000000008399 202.0
SYD3_k127_4477943_9 COG1705 Muramidase (flagellum-specific) - - - 0.00000000000000000000000000000000000000000005152 167.0
SYD3_k127_4523664_0 Gliding motility-associated C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001367 283.0
SYD3_k127_4523664_1 RNA pseudouridylate synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.000000000000000000000000005049 115.0
SYD3_k127_458455_0 alpha-2-macroglobulin domain protein K06894 - - 0.0 1344.0
SYD3_k127_458455_1 Penicillin-binding Protein K05367 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 333.0
SYD3_k127_458455_2 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 - 2.3.1.61 0.00000000000000000000000000002746 121.0
SYD3_k127_4606687_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 468.0
SYD3_k127_4606687_1 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000627 388.0
SYD3_k127_4606687_2 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000005113 155.0
SYD3_k127_4606687_3 Putative porin - - - 0.0000000000004071 83.0
SYD3_k127_4614807_0 TonB dependent receptor - - - 8.218e-231 749.0
SYD3_k127_4614807_1 Fatty acid desaturase K00508 - 1.14.19.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 457.0
SYD3_k127_4614807_2 Glycoside hydrolase family 16 K01216 - 3.2.1.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 357.0
SYD3_k127_4614807_3 SusD family K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006222 356.0
SYD3_k127_4614807_4 Glycosyl hydrolases family 16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 307.0
SYD3_k127_4614807_5 Y_Y_Y domain - - - 0.0000000000000000000000000000000000000000000002305 177.0
SYD3_k127_4614807_6 Pkd domain containing protein - - - 0.00000000000000000000000000000000000004399 164.0
SYD3_k127_4614807_8 metallopeptidase activity K07004,K19668 - 3.2.1.91 0.000007936 57.0
SYD3_k127_4623845_0 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006558 316.0
SYD3_k127_4623845_1 PFAM Outer membrane protein, OmpA MotB, C-terminal - - - 0.000000000000000000000000934 122.0
SYD3_k127_4628246_0 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 347.0
SYD3_k127_4628246_1 PFAM peptidase M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008004 290.0
SYD3_k127_4628246_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000002437 243.0
SYD3_k127_4628246_3 translation initiation factor activity K06996 - - 0.0000000000000000000000000000000000001145 145.0
SYD3_k127_4628246_4 cold-shock protein K03704 - - 0.000000000000000000000005787 106.0
SYD3_k127_4632134_0 Participates in both transcription termination and antitermination K02600 - - 1.624e-198 625.0
SYD3_k127_4632134_1 Radical SAM K11784 - 1.21.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 584.0
SYD3_k127_4632134_10 Protein of unknown function (DUF559) - - - 0.0000000000000000000000000002174 121.0
SYD3_k127_4632134_11 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000269 102.0
SYD3_k127_4632134_12 protein kinase activity - - - 0.000000000000000005354 99.0
SYD3_k127_4632134_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008901 386.0
SYD3_k127_4632134_3 Putative serine dehydratase domain K20757 - 4.3.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 356.0
SYD3_k127_4632134_4 COG1705 Muramidase (flagellum-specific) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005044 295.0
SYD3_k127_4632134_5 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000001715 259.0
SYD3_k127_4632134_6 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003794 252.0
SYD3_k127_4632134_7 Ryanodine receptor Ryr - - - 0.00000000000000000000000000000000000002137 164.0
SYD3_k127_4632134_8 TIR domain K12132 - 2.7.11.1 0.000000000000000000000000000001604 139.0
SYD3_k127_4634672_0 DNA polymerase K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 353.0
SYD3_k127_4634672_1 ABC-type uncharacterized transport system - - - 0.00000000000000000000000000000000000000000000000000000000002651 211.0
SYD3_k127_4701121_0 Outer membrane protein protective antigen OMA87 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 523.0
SYD3_k127_4701121_1 beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 372.0
SYD3_k127_4701121_10 sequence-specific DNA binding - - - 0.0000000000000000001755 93.0
SYD3_k127_4701121_11 - - - - 0.000000000000000001161 94.0
SYD3_k127_4701121_12 - - - - 0.0000000000000006848 82.0
SYD3_k127_4701121_13 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000001781 81.0
SYD3_k127_4701121_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006373 317.0
SYD3_k127_4701121_3 Cell envelope biogenesis protein AsmA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001137 301.0
SYD3_k127_4701121_5 Biogenesis protein - - - 0.00000000000000000000000000000000000000000000000000006806 194.0
SYD3_k127_4701121_6 - - - - 0.000000000000000000000000000000000000000000001528 170.0
SYD3_k127_4701121_7 - - - - 0.0000000000000000000000000000000000003153 145.0
SYD3_k127_4701121_9 - - - - 0.0000000000000000000000000544 117.0
SYD3_k127_4806996_0 COGs COG0737 5'-nucleotidase 2' 3'-cyclic phosphodiesterase and related esterase K01081,K11751 - 3.1.3.5,3.6.1.45 1.475e-271 845.0
SYD3_k127_4806996_1 outer membrane porin, OprD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007912 484.0
SYD3_k127_4806996_2 Cytochrome C oxidase, cbb3-type, subunit III K19713 - 1.8.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 454.0
SYD3_k127_4806996_3 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003299 327.0
SYD3_k127_4806996_4 Transporter K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001287 268.0
SYD3_k127_4806996_5 domain protein K20276 - - 0.0000000000000000000000000000000000000000000000002255 205.0
SYD3_k127_4806996_6 PFAM DsrE DsrF-like family K09004 - - 0.000000000000000000000000000000000009418 140.0
SYD3_k127_4806996_7 Belongs to the peptidase S8 family - - - 0.00000000000000000000593 111.0
SYD3_k127_4815073_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 347.0
SYD3_k127_4815073_1 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 341.0
SYD3_k127_4815073_2 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003175 330.0
SYD3_k127_4815073_3 PFAM Acyl-protein synthetase, LuxE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003473 288.0
SYD3_k127_4815073_4 phosphorylase K00757 - 2.4.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000004058 258.0
SYD3_k127_4815073_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000309 234.0
SYD3_k127_4815073_6 ArsC family K00537 - 1.20.4.1 0.00000000000000000000000000000000000000008044 154.0
SYD3_k127_4815073_8 ABC-type transport system involved in cytochrome c biogenesis permease component K02194 - - 0.0000000000000000009921 88.0
SYD3_k127_4815073_9 ATPase kinase involved in NAD metabolism - - - 0.000000000000000002549 93.0
SYD3_k127_4833961_0 COG0308 Aminopeptidase N - - - 0.0 1077.0
SYD3_k127_4833961_1 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 8.286e-306 953.0
SYD3_k127_4833961_10 PFAM ROK family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 381.0
SYD3_k127_4833961_11 IMG reference gene - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004473 420.0
SYD3_k127_4833961_12 Glycosyl transferase, family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 358.0
SYD3_k127_4833961_13 fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000464 319.0
SYD3_k127_4833961_14 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009905 311.0
SYD3_k127_4833961_15 Fatty acid hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 310.0
SYD3_k127_4833961_16 Squalene-hopene cyclase C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001105 289.0
SYD3_k127_4833961_17 Transposase IS116/IS110/IS902 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008314 271.0
SYD3_k127_4833961_18 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000006021 265.0
SYD3_k127_4833961_19 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000001401 229.0
SYD3_k127_4833961_2 C-terminal domain of CHU protein family - - - 2.173e-207 725.0
SYD3_k127_4833961_20 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000003773 219.0
SYD3_k127_4833961_21 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.00000000000000000000000000000000000000000000000000000000006682 212.0
SYD3_k127_4833961_22 PFAM Prenyltransferase squalene oxidase - - - 0.000000000000000000000000000000000000000000000000000007017 206.0
SYD3_k127_4833961_23 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000009009 196.0
SYD3_k127_4833961_24 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000003529 177.0
SYD3_k127_4833961_25 Universal bacterial protein YeaZ K14742 - - 0.0000000000000000000000000000000000000001014 159.0
SYD3_k127_4833961_26 Universal stress protein family - - - 0.0000000000000000000000000000000000000008272 158.0
SYD3_k127_4833961_27 Molecular chaperone DnaK - - - 0.000000000000000000000000000000000001189 153.0
SYD3_k127_4833961_28 Protein of unknown function (DUF1761) - - - 0.000000000000000000000000000000009154 132.0
SYD3_k127_4833961_29 OsmC-like protein K07397 - - 0.00000000000000000000000000000001075 133.0
SYD3_k127_4833961_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 569.0
SYD3_k127_4833961_30 - K13652 - - 0.0000000000000000000000000000001939 130.0
SYD3_k127_4833961_31 DNA-binding transcription factor activity K03892 - - 0.000000000000000000000000000002059 123.0
SYD3_k127_4833961_4 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 538.0
SYD3_k127_4833961_5 ABC transporter K18890 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004855 466.0
SYD3_k127_4833961_6 Belongs to the UPF0176 family K07146 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006671 458.0
SYD3_k127_4833961_7 COG0659 Sulfate permease and related transporters (MFS superfamily) K01673,K03321 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 439.0
SYD3_k127_4833961_8 PFAM pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 432.0
SYD3_k127_4833961_9 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005277 431.0
SYD3_k127_4884635_0 PFAM Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005276 478.0
SYD3_k127_4884635_1 Dahp synthetase i kdsa K04516 - 5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 430.0
SYD3_k127_4904299_0 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 410.0
SYD3_k127_4904299_1 signal transduction protein with CBS domains - - - 0.0000000000000000000000000000000000000000000000000006026 186.0
SYD3_k127_4904299_2 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.0000000000000000000000000000000000000000000122 168.0
SYD3_k127_4904299_3 RF-1 domain K15034 - - 0.0000000003429 65.0
SYD3_k127_4909437_0 Bacterial membrane protein YfhO - - - 9.186e-197 636.0
SYD3_k127_4909437_1 Oxidoreductase family, C-terminal alpha beta domain K13016 - 1.1.1.335 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 342.0
SYD3_k127_4909437_2 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 342.0
SYD3_k127_4909437_3 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000009932 152.0
SYD3_k127_4910857_0 Na H antiporter K03316 - - 2.773e-216 685.0
SYD3_k127_4910857_1 Immunoglobulin - - - 0.00000000000000000000000000000000000000000000000000000005614 218.0
SYD3_k127_4910857_2 PFAM Uncharacterised protein family UPF0150 - - - 0.0000000000000000000000000000000000000000001013 163.0
SYD3_k127_4910857_3 luciferase - - - 0.00000000000000000000003739 100.0
SYD3_k127_4910857_4 HicA toxin of bacterial toxin-antitoxin, - - - 0.000000000000000000002144 95.0
SYD3_k127_4910857_5 Concanavalin A-like lectin/glucanases superfamily - - - 0.0000000005775 72.0
SYD3_k127_4910857_6 Immunoglobulin - - - 0.00003792 57.0
SYD3_k127_4914913_0 Two component regulator propeller domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 593.0
SYD3_k127_4914913_1 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000000000000000002744 243.0
SYD3_k127_4914913_2 amine dehydrogenase activity - - - 0.0000005678 57.0
SYD3_k127_4914913_3 - - - - 0.0000568 48.0
SYD3_k127_4915929_0 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 306.0
SYD3_k127_4915929_1 PFAM Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.00004519 48.0
SYD3_k127_4930137_0 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 345.0
SYD3_k127_4930137_1 deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003785 327.0
SYD3_k127_4930137_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000001054 216.0
SYD3_k127_4930137_3 Belongs to the Nudix hydrolase family - - - 0.00000000000000000000000000000000000004065 150.0
SYD3_k127_4930137_4 adenosyltransferase K00798 - 2.5.1.17 0.0000000000000117 75.0
SYD3_k127_4948803_0 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 600.0
SYD3_k127_4948803_1 ATPase (AAA K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 552.0
SYD3_k127_4948803_10 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000001984 151.0
SYD3_k127_4948803_11 heme copper-type cytochrome quinol oxidase, subunit 3 K02276 - 1.9.3.1 0.00000000000000000000000000000001531 134.0
SYD3_k127_4948803_12 PFAM Cytochrome c assembly protein K02198 - - 0.0000000000000000000000000001917 114.0
SYD3_k127_4948803_13 - - - - 0.00000000000000000000009998 109.0
SYD3_k127_4948803_2 Na dependent nucleoside transporter K03317 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 536.0
SYD3_k127_4948803_3 CotH kinase protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 488.0
SYD3_k127_4948803_4 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 480.0
SYD3_k127_4948803_5 PFAM Cytochrome c assembly protein K02198 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004958 462.0
SYD3_k127_4948803_6 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005942 454.0
SYD3_k127_4948803_7 uridine kinase K00876 - 2.7.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000009579 242.0
SYD3_k127_4948803_8 NADP oxidoreductase coenzyme F420-dependent - - - 0.0000000000000000000000000000000000000000000000000004141 193.0
SYD3_k127_4948803_9 SprB repeat - - - 0.000000000000000000000000000000000000005179 169.0
SYD3_k127_4954987_0 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004499 324.0
SYD3_k127_4954987_1 TIGRFAM purine nucleoside phosphorylase K03784 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000003283 227.0
SYD3_k127_4954987_2 OmpA family - - - 0.0000000000000003485 94.0
SYD3_k127_4954987_3 cellulose binding - - - 0.00002966 56.0
SYD3_k127_4963846_0 TonB dependent receptor - - - 6.225e-305 953.0
SYD3_k127_4963846_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 9.736e-208 656.0
SYD3_k127_4963846_10 TIGRFAM Gliding motility-associated protein, GldC - - - 0.0000000000000000000000003069 110.0
SYD3_k127_4963846_11 ABC-type transport system involved in cytochrome c biogenesis permease component K02194 - - 0.000000000001261 72.0
SYD3_k127_4963846_12 transport - - - 0.00000000005176 67.0
SYD3_k127_4963846_2 Pyridoxal-dependent decarboxylase conserved domain K01593 - 4.1.1.105,4.1.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004775 485.0
SYD3_k127_4963846_3 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 365.0
SYD3_k127_4963846_4 PFAM Cytochrome c assembly protein K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003734 362.0
SYD3_k127_4963846_5 Domain of unknown function (DUF4249) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005553 302.0
SYD3_k127_4963846_6 Methyltransferase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 290.0
SYD3_k127_4963846_7 Transcriptional regulator, asnc family K03719,K05800 - - 0.000000000000000000000000000000000000000000000000000000000000000003704 228.0
SYD3_k127_4963846_8 epimerase - - - 0.000000000000000000000000000000000000000000000001638 182.0
SYD3_k127_4963846_9 GumN protein K09973 - - 0.0000000000000000000000000000002515 133.0
SYD3_k127_5003730_0 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001941 272.0
SYD3_k127_5010686_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1389.0
SYD3_k127_5010686_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 1.302e-313 970.0
SYD3_k127_5010686_10 regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000003067 246.0
SYD3_k127_5010686_11 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000000000000000000000000000008823 235.0
SYD3_k127_5010686_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000004051 252.0
SYD3_k127_5010686_13 Legume lectin domain - - - 0.00000000000000000000000000000000000000000000000000000000000006318 245.0
SYD3_k127_5010686_14 - - - - 0.00000000000000000000000000000000000000000000000000000000006019 218.0
SYD3_k127_5010686_15 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000000000000000000000000000000000000000000000007164 211.0
SYD3_k127_5010686_16 bacterial-type flagellum-dependent cell motility - - - 0.000000000000000000000000000000000002477 161.0
SYD3_k127_5010686_17 Tetratricopeptide repeat - - - 0.00000000000000000000000000000001941 146.0
SYD3_k127_5010686_18 - - - - 0.0000000000000000000000000003984 121.0
SYD3_k127_5010686_19 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000007542 116.0
SYD3_k127_5010686_2 Belongs to the thiolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008593 556.0
SYD3_k127_5010686_20 - - - - 0.0000000000000000000007701 100.0
SYD3_k127_5010686_21 DinB superfamily - - - 0.000000000000000001137 93.0
SYD3_k127_5010686_22 metallopeptidase activity K01179,K03768,K08738 - 3.2.1.4,5.2.1.8 0.000000000000000002906 101.0
SYD3_k127_5010686_24 Pkd domain containing protein - - - 0.00001775 59.0
SYD3_k127_5010686_25 ASPIC and UnbV - - - 0.00003629 57.0
SYD3_k127_5010686_26 cell adhesion involved in biofilm formation - - - 0.0001602 56.0
SYD3_k127_5010686_3 Nucleoside H symporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006127 552.0
SYD3_k127_5010686_4 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009601 402.0
SYD3_k127_5010686_5 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 393.0
SYD3_k127_5010686_6 SMART ATPase, AAA type, core K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007617 336.0
SYD3_k127_5010686_7 Glycogen recognition site of AMP-activated protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009016 294.0
SYD3_k127_5010686_8 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004151 272.0
SYD3_k127_5010686_9 Two component regulator three Y - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003024 273.0
SYD3_k127_5095831_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 3.222e-280 868.0
SYD3_k127_5095831_1 ATPase (AAA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004198 488.0
SYD3_k127_5095831_13 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0001071 44.0
SYD3_k127_5095831_2 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 417.0
SYD3_k127_5095831_3 4-hydroxybenzoate polyprenyltransferase K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001985 318.0
SYD3_k127_5095831_4 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000002383 261.0
SYD3_k127_5095831_5 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.00000000000000000000000000000000000000000000000000000006379 201.0
SYD3_k127_5095831_6 COG1331 Highly conserved protein containing a thioredoxin domain - - - 0.00000000000000000000000000000000000000000000005106 175.0
SYD3_k127_5095831_7 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.00000000000000000000000000000000000000000002657 162.0
SYD3_k127_5095831_8 Protein of unknown function (DUF1573) - - - 0.00000000000000000000000000000000000000001692 159.0
SYD3_k127_5095831_9 Preprotein translocase SecG subunit K03075 - - 0.000000000000000000000001458 104.0
SYD3_k127_5128808_0 FeS assembly protein SufB K07033,K09014 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006790,GO:0008150,GO:0008152,GO:0009536,GO:0009842,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0071840 - 7.69e-249 775.0
SYD3_k127_5128808_1 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003859 572.0
SYD3_k127_5128808_2 ATPases associated with a variety of cellular activities K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 350.0
SYD3_k127_5128808_3 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000001439 242.0
SYD3_k127_5128808_4 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961,K01965,K01968 - 6.3.4.14,6.4.1.2,6.4.1.3,6.4.1.4 0.00000000000000000000000000000000000000000000000000002034 192.0
SYD3_k127_5128808_5 TIGRFAM FeS assembly protein SufD K09015 - - 0.00000000000002041 79.0
SYD3_k127_5307134_0 of the AAA class - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000412 560.0
SYD3_k127_5307134_1 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 422.0
SYD3_k127_5307134_2 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000007346 237.0
SYD3_k127_5307134_3 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000001792 220.0
SYD3_k127_5307134_4 PFAM secretion protein HlyD family protein - - - 0.00000000000000000000000000000000000000000000000000000001595 210.0
SYD3_k127_5307134_5 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000000003253 196.0
SYD3_k127_5307134_6 Domain of unknown function (DUF4440) - - - 0.00000000000000000000000000453 117.0
SYD3_k127_5307134_7 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000004894 94.0
SYD3_k127_5307134_8 Outer membrane protein beta-barrel domain - - - 0.00000000000000000359 98.0
SYD3_k127_5307134_9 PFAM WD40 domain protein beta Propeller - - - 0.0000000001173 63.0
SYD3_k127_5312785_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - 2.29e-270 841.0
SYD3_k127_5312785_1 ABC transporter K18889 - - 7.489e-221 701.0
SYD3_k127_5312785_10 rRNA binding - - - 0.000000000000000008071 93.0
SYD3_k127_5312785_2 - - - - 6.547e-204 642.0
SYD3_k127_5312785_3 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 569.0
SYD3_k127_5312785_4 Fructose-1-6-bisphosphatase, N-terminal domain K03841 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 519.0
SYD3_k127_5312785_5 Threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 405.0
SYD3_k127_5312785_6 regulator of chromosome condensation, RCC1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 344.0
SYD3_k127_5312785_7 SMART PUR-alpha beta gamma DNA RNA-binding - - - 0.000000000000000000000000000000000000000444 151.0
SYD3_k127_5312785_8 TIGRFAM ComEC Rec2-related protein K02238 - - 0.000000000000000000000000000000000000009313 166.0
SYD3_k127_5312785_9 Helix-hairpin-helix motif - - - 0.000000000000000000000000003228 122.0
SYD3_k127_5315054_0 Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006584 496.0
SYD3_k127_5315054_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000007704 249.0
SYD3_k127_5315054_2 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000001831 165.0
SYD3_k127_5315054_3 glycosyltransferase - - - 0.00000000000000000000000000000000000000004191 160.0
SYD3_k127_5315054_4 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000001483 156.0
SYD3_k127_5315054_5 Squalene--hopene cyclase - - - 0.000000000000000000000000000000000009809 143.0
SYD3_k127_5315054_6 - - - - 0.00000000002806 72.0
SYD3_k127_5338749_0 Sulfatase - - - 0.0 1165.0
SYD3_k127_5338749_1 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides - - - 7.817e-222 710.0
SYD3_k127_5338749_10 - - - - 0.00000000000000000000000000000000006494 140.0
SYD3_k127_5338749_11 - - - - 0.00000000000000000000000000008729 123.0
SYD3_k127_5338749_12 Uncharacterized protein family, UPF0114 - - - 0.000000000000000008735 89.0
SYD3_k127_5338749_14 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000002582 71.0
SYD3_k127_5338749_15 - - - - 0.0001568 48.0
SYD3_k127_5338749_2 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 501.0
SYD3_k127_5338749_3 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004157 449.0
SYD3_k127_5338749_4 Tfp pilus assembly protein FimV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 439.0
SYD3_k127_5338749_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007698 349.0
SYD3_k127_5338749_6 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001691 269.0
SYD3_k127_5338749_8 - K07275 - - 0.0000000000000000000000000000000000000000000000000000000003021 208.0
SYD3_k127_5338749_9 - - - - 0.000000000000000000000000000000000000003759 151.0
SYD3_k127_5342583_0 Large extracellular alpha-helical protein - - - 1.065e-232 791.0
SYD3_k127_5342583_1 PFAM SMP-30 Gluconolaconase - - - 0.0000000001028 74.0
SYD3_k127_5342583_2 IMG reference gene - - - 0.0000000006649 70.0
SYD3_k127_5342583_3 Fibronectin type 3 domain - - - 0.0005102 43.0
SYD3_k127_5343951_0 Cell shape determining protein MreB Mrl K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009079 550.0
SYD3_k127_5343951_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 372.0
SYD3_k127_5343951_2 Peptidase M16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 302.0
SYD3_k127_5343951_3 shape-determining protein MreC K03570 - - 0.0000000000000000000000000000000000000000000000000000002051 203.0
SYD3_k127_5343951_4 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.000000000000000000000005181 106.0
SYD3_k127_5343951_5 rod shape-determining protein MreD - - - 0.000000000000003225 82.0
SYD3_k127_5346097_0 SPTR Cell surface protein K01186,K14274 - 3.2.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008278 420.0
SYD3_k127_5346097_1 Activator of Hsp90 ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000001403 225.0
SYD3_k127_5346097_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000776 211.0
SYD3_k127_5346097_3 - - - - 0.0000000000000000000000000000000000000000000000000000008252 197.0
SYD3_k127_5346097_4 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000002317 69.0
SYD3_k127_5346754_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1077.0
SYD3_k127_5346754_1 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0 1024.0
SYD3_k127_5346754_2 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 592.0
SYD3_k127_5346754_3 chaperone-mediated protein folding K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002359 278.0
SYD3_k127_5346754_4 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000001345 253.0
SYD3_k127_5346754_5 Endonuclease I - - - 0.000000000000000000000000000000000000000000000000000000000000000000686 241.0
SYD3_k127_5346754_6 TonB family domain protein - - - 0.0000000000000000000000000000000000000000000000000000004644 203.0
SYD3_k127_5346754_7 Phosphoribosyl-ATP pyrophosphohydrolase - - - 0.00000000000000000000000000000000000000000000000000001154 194.0
SYD3_k127_5346754_8 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000005491 170.0
SYD3_k127_5346754_9 PFAM Hemolysin-type calcium-binding repeat (2 copies) - - - 0.0000002378 63.0
SYD3_k127_5349772_0 transport system involved in gliding motility, auxiliary component K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 526.0
SYD3_k127_5349772_1 TIGRFAM Gliding motility-associated ABC transporter permease protein GldF K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004762 250.0
SYD3_k127_5349772_2 - - - - 0.00000000000000000000000000000000001518 142.0
SYD3_k127_5359992_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 1.758e-238 751.0
SYD3_k127_5359992_1 Pyridoxal-dependent decarboxylase conserved domain K01580 - 4.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 477.0
SYD3_k127_5359992_2 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 426.0
SYD3_k127_5359992_3 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007383 367.0
SYD3_k127_5359992_4 Conserved hypothetical protein (DUF2461) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004171 272.0
SYD3_k127_5359992_5 PFAM thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000005622 218.0
SYD3_k127_5359992_6 transcriptional regulator - - - 0.00000000000000000000000000000000000000009979 154.0
SYD3_k127_5359992_7 PFAM Cupin 2, conserved barrel - - - 0.00000000000000000000000000000002331 130.0
SYD3_k127_5394618_0 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000000000000000267 165.0
SYD3_k127_5394618_1 cellulose binding - - - 0.0000000000000000000000000000000003574 153.0
SYD3_k127_5394618_2 - - - - 0.000000000000000003452 91.0
SYD3_k127_5394618_3 - - - - 0.000000000000007514 82.0
SYD3_k127_5394618_4 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end - - - 0.0000000000004837 83.0
SYD3_k127_5394618_5 - - - - 0.000000000068 68.0
SYD3_k127_5395135_0 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 431.0
SYD3_k127_5395135_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 395.0
SYD3_k127_5395135_2 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008301 273.0
SYD3_k127_5395135_3 Protein of unknown function (DUF721) - - - 0.000000000003413 70.0
SYD3_k127_5397828_0 protein conserved in bacteria (DUF2329) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003968 569.0
SYD3_k127_5397828_1 cytokinin biosynthetic process K06966 - 3.2.2.10 0.0000000000000000000000000000000000001857 156.0
SYD3_k127_5397828_2 Pkd domain containing protein - - - 0.00000000000000000000000000000254 130.0
SYD3_k127_5397828_3 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000001085 111.0
SYD3_k127_5419451_0 ABC transporter K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003821 383.0
SYD3_k127_5419451_1 Tyrosine recombinase XerC K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002912 364.0
SYD3_k127_5419451_2 Bacterial Ig-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003499 324.0
SYD3_k127_5419451_3 Outer membrane protein beta-barrel family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 294.0
SYD3_k127_5419451_4 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000000005323 137.0
SYD3_k127_5432071_0 ATPases associated with a variety of cellular activities K06147 - - 1.767e-236 745.0
SYD3_k127_5432071_1 N-acetyl-alpha-D-glucosaminyl L-malate synthase K00754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005739 559.0
SYD3_k127_5432071_2 Fatty acid desaturase K00496 - 1.14.15.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005865 342.0
SYD3_k127_5432071_3 2Fe-2S iron-sulfur cluster binding domain K02613 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 328.0
SYD3_k127_5432071_4 YceI-like domain - - - 0.000000000000000000000000000000000000000000000008452 181.0
SYD3_k127_5432071_5 MerR family K22491 - - 0.0000000000000000000000000000000000000000000000107 182.0
SYD3_k127_5432071_6 NUDIX domain K01515 - 3.6.1.13 0.00000000000000000000000000000000000005596 151.0
SYD3_k127_5432071_7 Glycosyl transferase family 2 - - - 0.000000000000002162 77.0
SYD3_k127_5436016_0 Carboxypeptidase regulatory-like domain - - - 5.072e-268 844.0
SYD3_k127_5436016_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 587.0
SYD3_k127_5436016_2 Permease, YjgP YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005527 353.0
SYD3_k127_5436016_3 YceI-like domain - - - 0.000000000000000000000000000000000000000000000000000000000002939 215.0
SYD3_k127_5436016_4 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000008243 188.0
SYD3_k127_5436016_5 signal peptide peptidase SppA, 67K type K04773 - - 0.0000000000000000000000000000000004633 137.0
SYD3_k127_5436016_6 PFAM Phosphatidic acid phosphatase type 2 haloperoxidase - - - 0.00000000000000000000000002241 116.0
SYD3_k127_5436016_7 PFAM Outer membrane chaperone Skp (OmpH) K06142 - - 0.000000000001948 76.0
SYD3_k127_5470613_0 PFAM Formylglycine-generating sulfatase enzyme - - - 4.483e-201 632.0
SYD3_k127_5470613_1 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 574.0
SYD3_k127_5470613_10 Outer membrane protein beta-barrel domain - - - 0.0000000000000002326 87.0
SYD3_k127_5470613_2 Gliding motility-associated protein GldM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006322 420.0
SYD3_k127_5470613_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 387.0
SYD3_k127_5470613_4 TIGRFAM gliding motility associated - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008519 301.0
SYD3_k127_5470613_5 of the beta-lactamase superfamily I K06167 - 3.1.4.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000007279 265.0
SYD3_k127_5470613_6 COGs COG2270 Permease of the major facilitator superfamily K06902 - - 0.000000000000000000000000000000000000000000000000000000000000004335 224.0
SYD3_k127_5470613_7 TIGRFAM gliding motility-associated protein GldL - - - 0.0000000000000000000000000000000000000000000000000000002435 202.0
SYD3_k127_5470613_8 translation initiation factor activity - - - 0.0000000000000000000000000000000000000000000000002131 189.0
SYD3_k127_5470613_9 - - - - 0.000000000000000006816 88.0
SYD3_k127_5535387_0 cellulase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004232 310.0
SYD3_k127_5535387_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000424 288.0
SYD3_k127_5535387_2 Response regulator of the LytR AlgR family K02477 - - 0.0000000000000000000000000000000000000000000000000000000000006065 218.0
SYD3_k127_5535387_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell - - - 0.000000000000000000000000000000003214 145.0
SYD3_k127_5535387_4 PFAM Outer membrane efflux protein - - - 0.00000000000001421 74.0
SYD3_k127_5539240_0 Pkd domain - - - 2.915e-227 791.0
SYD3_k127_5539240_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 465.0
SYD3_k127_5539240_2 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009469 404.0
SYD3_k127_5539240_3 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001389 245.0
SYD3_k127_5539240_4 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002072 247.0
SYD3_k127_5539240_5 metallopeptidase activity K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000001789 262.0
SYD3_k127_5539240_6 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000000000000000000009647 203.0
SYD3_k127_5539240_7 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000156 193.0
SYD3_k127_5539240_8 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000004099 183.0
SYD3_k127_5539240_9 Polymorphic membrane protein Chlamydia - - - 0.000000000000000000000002149 121.0
SYD3_k127_5553856_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 3.724e-266 834.0
SYD3_k127_5553856_1 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006343 575.0
SYD3_k127_5553856_10 Nephrocystin-3 - - - 0.00000000000000000000000000009173 126.0
SYD3_k127_5553856_11 Protein of unknown function (DUF433) - - - 0.00000000000000000000000000245 112.0
SYD3_k127_5553856_12 Protein of unknown function (DUF2384) - - - 0.0000000000000007663 79.0
SYD3_k127_5553856_14 Sulfatase - - - 0.00000000000103 73.0
SYD3_k127_5553856_15 - - - - 0.00000001881 57.0
SYD3_k127_5553856_16 - - - - 0.0000315 50.0
SYD3_k127_5553856_2 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008184 367.0
SYD3_k127_5553856_3 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007211 350.0
SYD3_k127_5553856_4 Cyclic nucleotide-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003252 319.0
SYD3_k127_5553856_5 RES - - - 0.000000000000000000000000000000000000000000000000000000000000002235 220.0
SYD3_k127_5553856_6 Protein of unknown function (DUF2384) - - - 0.000000000000000000000000000000000000000000000000000000000001925 213.0
SYD3_k127_5553856_7 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000005414 192.0
SYD3_k127_5553856_8 - - - - 0.0000000000000000000000000000000000000000004276 160.0
SYD3_k127_5553856_9 - - - - 0.00000000000000000000000000002475 120.0
SYD3_k127_5558155_0 mannose-1-phosphate guanylyltransferase K00971 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 362.0
SYD3_k127_5558155_1 COG0438 Glycosyltransferase K13004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005873 355.0
SYD3_k127_5558155_2 glycosyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000001855 231.0
SYD3_k127_5558155_3 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.00000000000000000000000004137 109.0
SYD3_k127_556440_0 Lamin Tail Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 506.0
SYD3_k127_556440_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000001498 161.0
SYD3_k127_5615248_0 Belongs to the glycosyl hydrolase 18 family - - - 1.84e-210 693.0
SYD3_k127_5615248_1 Glutathione synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 475.0
SYD3_k127_5615248_10 Glycogen recognition site of AMP-activated protein kinase - - - 0.000000000000000000000000000000002255 132.0
SYD3_k127_5615248_2 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 474.0
SYD3_k127_5615248_3 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004066 422.0
SYD3_k127_5615248_4 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008497 421.0
SYD3_k127_5615248_5 esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002819 293.0
SYD3_k127_5615248_6 GMP synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001173 257.0
SYD3_k127_5615248_7 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000007973 193.0
SYD3_k127_5615248_8 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000006697 183.0
SYD3_k127_5615248_9 TM2 domain - - - 0.0000000000000000000000000000000000000005496 165.0
SYD3_k127_5646450_0 Belongs to the glycosyl hydrolase 13 family K21575 - 3.2.1.135 1.045e-269 842.0
SYD3_k127_5646450_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 5.453e-269 900.0
SYD3_k127_5646450_10 cellulase activity - - - 0.0000000000000000000000000000000000000000000000001172 198.0
SYD3_k127_5646450_11 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000008811 174.0
SYD3_k127_5646450_12 Domain of unknown function (DUF4260) - - - 0.0000000000000000000000000000000000000000000199 164.0
SYD3_k127_5646450_13 cellulase activity - - - 0.00000000000000000000000000000000000000005054 173.0
SYD3_k127_5646450_14 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000005799 153.0
SYD3_k127_5646450_15 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000009999 151.0
SYD3_k127_5646450_17 Cro/C1-type HTH DNA-binding domain K07727 - - 0.000000000000000000000000000000007439 127.0
SYD3_k127_5646450_18 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000005761 131.0
SYD3_k127_5646450_19 Receptor L domain - - - 0.0002284 55.0
SYD3_k127_5646450_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 331.0
SYD3_k127_5646450_20 Leucine rich repeat K13730 - - 0.0002284 55.0
SYD3_k127_5646450_3 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 314.0
SYD3_k127_5646450_4 Metal-dependent hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001572 266.0
SYD3_k127_5646450_5 Trehalose utilisation K08738,K09992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003406 267.0
SYD3_k127_5646450_6 regulation of response to stimulus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000589 278.0
SYD3_k127_5646450_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003295 243.0
SYD3_k127_5646450_8 Protein of unknown function (DUF2975) - - - 0.000000000000000000000000000000000000000000000000000000000000000000004146 238.0
SYD3_k127_5646450_9 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000002237 218.0
SYD3_k127_5683802_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 5.668e-278 861.0
SYD3_k127_5697259_0 with chaperone activity ATP-binding subunit K03696 - - 0.0 1273.0
SYD3_k127_5697259_1 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 642.0
SYD3_k127_5697259_10 Caulimovirus viroplasmin K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000003467 250.0
SYD3_k127_5697259_11 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000002596 237.0
SYD3_k127_5697259_12 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000175 248.0
SYD3_k127_5697259_13 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000000005283 162.0
SYD3_k127_5697259_14 Protein of unknown function (DUF2795) - - - 0.0000000000000000000000000000000000001819 141.0
SYD3_k127_5697259_15 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.00000000000000000000000000000002353 132.0
SYD3_k127_5697259_16 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000531 85.0
SYD3_k127_5697259_17 Domain of unknown function (DUF4293) - - - 0.0000000000000001473 85.0
SYD3_k127_5697259_18 tetratricopeptide repeat - - - 0.0000000000001424 80.0
SYD3_k127_5697259_19 transporter antisigma-factor antagonist STAS - - - 0.0000000005776 61.0
SYD3_k127_5697259_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 565.0
SYD3_k127_5697259_3 domain, Protein K20276 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 559.0
SYD3_k127_5697259_4 domain, Protein K20276 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 541.0
SYD3_k127_5697259_5 OstA-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007508 445.0
SYD3_k127_5697259_6 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 435.0
SYD3_k127_5697259_7 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 286.0
SYD3_k127_5697259_8 hydrolase, TatD K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003808 283.0
SYD3_k127_5697259_9 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000001573 248.0
SYD3_k127_5727767_0 Outer membrane protein beta-barrel family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006817 593.0
SYD3_k127_5727767_1 chlorophyll binding K03640 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005016 261.0
SYD3_k127_5727767_2 Two component transcriptional regulator, winged helix family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001104 254.0
SYD3_k127_5727767_3 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000004871 257.0
SYD3_k127_5727767_4 Protein of unknown function (Porph_ging) - - - 0.000000000000000000000000000000000000002058 156.0
SYD3_k127_5727767_5 helix_turn_helix, arabinose operon control protein - - - 0.0002356 43.0
SYD3_k127_5757783_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 606.0
SYD3_k127_5757783_1 LmbE family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 401.0
SYD3_k127_5757783_2 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003745 278.0
SYD3_k127_5757783_3 transporter antisigma-factor antagonist STAS - - - 0.000000000000000000000000001151 113.0
SYD3_k127_5797875_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 1.033e-205 665.0
SYD3_k127_5797875_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 478.0
SYD3_k127_5797875_2 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 423.0
SYD3_k127_5797875_3 signal peptide peptidase SppA, 67K type K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 356.0
SYD3_k127_5797875_4 Polyphosphate nucleotide phosphotransferase, PPK2 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 318.0
SYD3_k127_5797875_5 Protein of unknown function (DUF3810) - - - 0.000000000000000000000000000000000000000000000000000000004193 213.0
SYD3_k127_5797875_6 DNA RNA non-specific endonuclease K01173 - - 0.0000000000000000000000000000000000000000000000000001648 198.0
SYD3_k127_5797875_7 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000197 166.0
SYD3_k127_5797875_8 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.00000000000000000000000000000000000004069 154.0
SYD3_k127_5797875_9 photosystem II stabilization - - - 0.0000000000000000000000001219 117.0
SYD3_k127_5824837_0 PDZ DHR GLGF domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 305.0
SYD3_k127_5824837_1 PFAM amino acid permease-associated region K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005641 298.0
SYD3_k127_5824837_2 Ribosomal prokaryotic L21 protein K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000000000008282 129.0
SYD3_k127_5827738_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.727e-229 717.0
SYD3_k127_5827738_1 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009753 589.0
SYD3_k127_5827738_2 Protein of unknown function (DUF2400) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 323.0
SYD3_k127_5827738_3 uracil phosphoribosyltransferase K00761 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000003271 259.0
SYD3_k127_5827738_4 - - - - 0.0000000000000000000000000000000000000000000000000000000004618 212.0
SYD3_k127_583561_0 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003041 261.0
SYD3_k127_583561_1 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000006098 196.0
SYD3_k127_583561_2 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000000000000006576 183.0
SYD3_k127_583561_3 - - - - 0.00000000000000000000000000000000000000000000003296 172.0
SYD3_k127_5854648_0 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 9.342e-248 774.0
SYD3_k127_5854648_1 Fic/DOC family N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 534.0
SYD3_k127_5854648_2 - - - - 0.00000000000000000000000000000000009055 137.0
SYD3_k127_5854648_3 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.000000002875 59.0
SYD3_k127_5858958_0 COG1680 Beta-lactamase class C and other penicillin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 462.0
SYD3_k127_5858958_2 metallopeptidase activity - - - 0.00003174 57.0
SYD3_k127_5886562_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1404.0
SYD3_k127_5886562_1 Arylsulfatase K01130 - 3.1.6.1 4.491e-291 900.0
SYD3_k127_5886562_2 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 3.368e-266 826.0
SYD3_k127_5886562_3 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 465.0
SYD3_k127_5886562_4 Bacterial PH domain K08981 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000394 265.0
SYD3_k127_5886562_5 Peptide-N-glycosidase F, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000009047 218.0
SYD3_k127_5886562_6 Transposase IS200 like - - - 0.0000000000000000000000000000005432 127.0
SYD3_k127_5886562_7 Bacterial PH domain K09167 - - 0.000000000000000000000000000712 121.0
SYD3_k127_5886562_8 - - - - 0.0000000000009754 74.0
SYD3_k127_5886562_9 COG2303 Choline dehydrogenase and related - - - 0.00000003861 56.0
SYD3_k127_5889058_0 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006903 277.0
SYD3_k127_5889058_1 AsmA family - - - 0.000000000000000000000000000000000000000000000000000000185 219.0
SYD3_k127_5889058_2 IMG reference gene - - - 0.000000000000000000000000000000000000000000000000000001491 212.0
SYD3_k127_5889058_3 domain, Protein K20276 - - 0.000000000000000000000000000000000000005683 169.0
SYD3_k127_5889058_4 metallopeptidase activity K01186 - 3.2.1.18 0.00000000003624 78.0
SYD3_k127_5889058_5 Metallo-peptidase family M12B Reprolysin-like - - - 0.000000005152 70.0
SYD3_k127_5890262_0 Transcriptional regulator, AbiEi antitoxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005606 332.0
SYD3_k127_5890262_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218,K03437 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000004439 248.0
SYD3_k127_5890262_2 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000001678 169.0
SYD3_k127_5892506_0 Methylase involved in ubiquinone menaquinone biosynthesis K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009023 436.0
SYD3_k127_5892506_1 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000001593 209.0
SYD3_k127_5892506_2 PFAM Bacterial regulatory protein, arsR family - - - 0.00000000000000000000000000000000000000000000000002018 180.0
SYD3_k127_5892506_3 domain, Protein - - - 0.00000000000001061 77.0
SYD3_k127_5892506_4 BNR repeat-like domain - - - 0.0000000000001393 83.0
SYD3_k127_5897343_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000000000000002963 222.0
SYD3_k127_5897343_1 Protein of unknown function (DUF3575) - - - 0.0000000000000000000000000000000000000000000000000000000000003655 220.0
SYD3_k127_5897343_2 - - - - 0.0000000000000000000000000000000000000000000000000000002103 201.0
SYD3_k127_5897343_3 - - - - 0.0000002526 55.0
SYD3_k127_5911127_0 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 533.0
SYD3_k127_5911127_1 PFAM Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000002864 220.0
SYD3_k127_5911127_2 Acyltransferase - - - 0.000000000000000000000000000000000000000000000000000003275 196.0
SYD3_k127_5911127_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000002327 178.0
SYD3_k127_5911127_4 - - - - 0.000000000000000002416 93.0
SYD3_k127_5926060_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1740.0
SYD3_k127_5926060_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 1.315e-257 805.0
SYD3_k127_5926060_2 Protein of unknown function (DUF2867) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008188 535.0
SYD3_k127_5926060_3 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006667 359.0
SYD3_k127_5926060_4 HEPN domain - - - 0.00000000000002892 77.0
SYD3_k127_598575_0 Bacterial extracellular solute-binding protein K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008874 561.0
SYD3_k127_598575_1 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007837 384.0
SYD3_k127_598575_2 Pfam Oxidoreductase family, C-terminal alpha beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 322.0
SYD3_k127_598575_3 alpha-L-rhamnosidase - - - 0.0000000000000000000000000000000000000000000613 182.0
SYD3_k127_598575_4 - - - - 0.0000000000000000000000000000000000000002151 152.0
SYD3_k127_598575_5 Outer membrane protein Omp28 - - - 0.00000000000000002293 94.0
SYD3_k127_598575_6 PFAM Glycosyl hydrolases family 28 - - - 0.000003517 51.0
SYD3_k127_598575_7 - - - - 0.0009916 48.0
SYD3_k127_5991776_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 4.319e-319 985.0
SYD3_k127_5991776_1 COGs COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004675 430.0
SYD3_k127_5991776_10 Reeler domain - - - 0.0000000000006507 83.0
SYD3_k127_5991776_2 SprB repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000517 443.0
SYD3_k127_5991776_3 Electron transfer flavoprotein K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 400.0
SYD3_k127_5991776_4 COGs COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 383.0
SYD3_k127_5991776_5 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 317.0
SYD3_k127_5991776_6 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000005965 266.0
SYD3_k127_5991776_7 PFAM Uncharacterised ACR, COG1259 K08999 - - 0.00000000000000000000000000000000000000000000000000000000000000000001009 238.0
SYD3_k127_5991776_8 Type IV pilus biogenesis stability protein PilW - - - 0.00000000000000001173 88.0
SYD3_k127_5991776_9 Reeler domain - - - 0.00000000000001088 83.0
SYD3_k127_5994065_0 Glycine D-amino acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 394.0
SYD3_k127_5994065_1 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002738 258.0
SYD3_k127_5994065_2 Proline racemase K12658 - 5.1.1.8 0.00000000000000000000000000000000000000000001134 163.0
SYD3_k127_5994065_3 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 - 5.2.1.8 0.0000000000000000000000000000000001787 138.0
SYD3_k127_6025407_0 COGs COG0659 Sulfate permease and related transporter (MFS superfamily) K01673,K03321 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 436.0
SYD3_k127_6025407_1 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 347.0
SYD3_k127_6025407_2 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000001068 222.0
SYD3_k127_6025407_4 - - - - 0.000000000000000000001607 100.0
SYD3_k127_6057184_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 1.092e-220 692.0
SYD3_k127_6057184_1 Belongs to the peptidase S8 family K13276 GO:0005575,GO:0005576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 563.0
SYD3_k127_6057184_2 Putative esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914 357.0
SYD3_k127_6057184_3 voltage-gated potassium channel activity K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002612 314.0
SYD3_k127_6057184_4 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 308.0
SYD3_k127_6057184_5 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family - - - 0.0000000000000000000000000000000000000000000000000002808 188.0
SYD3_k127_6057184_6 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000001277 171.0
SYD3_k127_6057184_7 Tetratricopeptide repeat - - - 0.00000000000000000000000000001691 134.0
SYD3_k127_6069402_0 ASPIC and UnbV - - - 1.966e-290 927.0
SYD3_k127_6069402_1 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005211 361.0
SYD3_k127_6093051_0 Required for chromosome condensation and partitioning K03529 - - 1.966e-232 761.0
SYD3_k127_6093051_1 PKD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 627.0
SYD3_k127_6093051_2 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 333.0
SYD3_k127_6093051_3 Translation initiation factor SUI1 K03113 - - 0.0000000000000006461 83.0
SYD3_k127_6093051_4 Beta-lactamase - - - 0.0000004936 61.0
SYD3_k127_6098236_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.0 1107.0
SYD3_k127_6098236_1 Esterase K07017 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009328 336.0
SYD3_k127_6098236_2 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 321.0
SYD3_k127_6112877_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 621.0
SYD3_k127_6112877_1 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 429.0
SYD3_k127_6112877_2 polysaccharide deacetylase - - - 0.0000000000000000000000000003192 123.0
SYD3_k127_6112877_3 PFAM YcfA-like protein - - - 0.00000000000000000000000008336 107.0
SYD3_k127_6112877_4 PFAM Uncharacterised protein family UPF0150 - - - 0.00000000000000001002 84.0
SYD3_k127_6112877_5 phospholipase C K01114 - 3.1.4.3 0.00000000000000002137 87.0
SYD3_k127_6146333_0 acetyl-CoA hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 562.0
SYD3_k127_6146333_1 histidine kinase-, DNA gyrase B - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003559 446.0
SYD3_k127_6146333_2 transcriptional regulator K22491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001867 276.0
SYD3_k127_6146333_3 Domain of unknown function (DUF4397) - - - 0.000000000000000000000000000000000000000000000000000000000000003876 222.0
SYD3_k127_6146333_4 - - - - 0.000000000000000000000000000000000000000000009668 172.0
SYD3_k127_6146333_5 PFAM Acetyl-CoA hydrolase transferase - - - 0.0000007452 50.0
SYD3_k127_6160839_0 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003695 454.0
SYD3_k127_6160839_1 Uncharacterized protein conserved in bacteria (DUF2179) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005004 366.0
SYD3_k127_6160839_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 340.0
SYD3_k127_6160839_3 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000924 106.0
SYD3_k127_6160839_4 - - - - 0.00000000001379 72.0
SYD3_k127_6180741_0 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 406.0
SYD3_k127_6180741_1 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000006311 257.0
SYD3_k127_6180741_2 NAD(P)H-binding K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000002203 222.0
SYD3_k127_6194266_0 SPTR ATPase, P-type (Transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 7.932e-248 781.0
SYD3_k127_6194266_1 Belongs to the formate--tetrahydrofolate ligase family K01938 GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.3 1.466e-247 775.0
SYD3_k127_6194266_10 IMP dehydrogenase activity K04767,K07182 - - 0.000000000000000000000000000000000000000000000009793 175.0
SYD3_k127_6194266_11 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000004456 152.0
SYD3_k127_6194266_12 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000000000000538 126.0
SYD3_k127_6194266_13 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000001764 122.0
SYD3_k127_6194266_14 IMP dehydrogenase activity K04767,K07182 - - 0.000000000000000000000001371 108.0
SYD3_k127_6194266_15 Universal stress protein - - - 0.000000000000000000001689 107.0
SYD3_k127_6194266_16 Domain of unknown function (DUF4292) - - - 0.00000000000000005607 91.0
SYD3_k127_6194266_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 1.826e-202 640.0
SYD3_k127_6194266_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000614 542.0
SYD3_k127_6194266_4 Thermophilic metalloprotease (M29) K19689 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004261 437.0
SYD3_k127_6194266_5 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003546 394.0
SYD3_k127_6194266_6 COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 298.0
SYD3_k127_6194266_7 PFAM Tetratricopeptide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005252 280.0
SYD3_k127_6194266_8 Peptidase, M23 family - - - 0.0000000000000000000000000000000000000000000000000000000007033 216.0
SYD3_k127_6194266_9 Universal stress protein - - - 0.000000000000000000000000000000000000000000000000000005449 199.0
SYD3_k127_6222753_0 protein CHP03519, membrane, Bacteroidetes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005466 380.0
SYD3_k127_6222753_1 - - - - 0.0000000000000000000000000000000003418 141.0
SYD3_k127_6222753_2 - - - - 0.000000000000000000000174 96.0
SYD3_k127_6222753_3 - - - - 0.0000000003557 68.0
SYD3_k127_6222753_5 - - - - 0.0002564 48.0
SYD3_k127_6259046_0 Belongs to the heme-copper respiratory oxidase family K15862 - 1.9.3.1 3.036e-270 836.0
SYD3_k127_6259046_1 COG5337 Spore coat assembly protein - - - 5.108e-209 675.0
SYD3_k127_6259046_10 Biogenesis protein K09792 - - 0.0000000000000000000000000000000000000000000000000000005542 201.0
SYD3_k127_6259046_11 - - - - 0.00000000000000000000000000000000000000000000000000001032 198.0
SYD3_k127_6259046_12 COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase - - - 0.0000000000000000000000000000000000000000000000000005595 190.0
SYD3_k127_6259046_14 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus - - - 0.0000000000000000000000000000000004082 136.0
SYD3_k127_6259046_15 Cys/Met metabolism PLP-dependent enzyme K01761 - 4.4.1.11 0.0000000000000000000000001005 109.0
SYD3_k127_6259046_16 FixH - - - 0.000000000000000005115 89.0
SYD3_k127_6259046_17 Protein of unknown function (DUF3667) - - - 0.0000000000000001275 88.0
SYD3_k127_6259046_18 Cytochrome c - - - 0.000001485 52.0
SYD3_k127_6259046_2 cytochrome c oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005287 574.0
SYD3_k127_6259046_3 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006589 554.0
SYD3_k127_6259046_4 LytTr DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 362.0
SYD3_k127_6259046_5 PFAM Pregnancy-associated plasma protein-A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001449 279.0
SYD3_k127_6259046_6 PFAM Cytochrome c, class I K00406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005355 263.0
SYD3_k127_6259046_7 Mechanosensitive ion channel K05802 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001466 248.0
SYD3_k127_6259046_8 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000003376 238.0
SYD3_k127_6259046_9 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000002381 249.0
SYD3_k127_6322253_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1199.0
SYD3_k127_6322253_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0 1081.0
SYD3_k127_6322253_10 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000003526 210.0
SYD3_k127_6322253_11 uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000001963 208.0
SYD3_k127_6322253_12 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000000000000000000000000000109 179.0
SYD3_k127_6322253_13 - - - - 0.00000000000000000001098 104.0
SYD3_k127_6322253_14 Tetratricopeptide - - - 0.00000000000000000005627 91.0
SYD3_k127_6322253_15 - - - - 0.00000009772 61.0
SYD3_k127_6322253_2 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003866 559.0
SYD3_k127_6322253_3 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 513.0
SYD3_k127_6322253_4 Ergosterol biosynthesis ERG4/ERG24 family K00213,K00223 - 1.3.1.21,1.3.1.71 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 486.0
SYD3_k127_6322253_5 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003333 502.0
SYD3_k127_6322253_6 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 404.0
SYD3_k127_6322253_7 beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 344.0
SYD3_k127_6322253_8 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000009562 225.0
SYD3_k127_6322253_9 short-chain dehydrogenase K07124 - - 0.00000000000000000000000000000000000000000000000000000000001152 216.0
SYD3_k127_6341435_0 Alpha-tubulin suppressor and related RCC1 domain-containing proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001158 262.0
SYD3_k127_6341435_1 - - - - 0.00000000000000000000001329 108.0
SYD3_k127_6341435_2 TonB dependent receptor K16087 - - 0.00000000000000005546 87.0
SYD3_k127_6341435_3 helix_turn_helix, Lux Regulon - - - 0.00000002947 64.0
SYD3_k127_6343220_0 Tetratricopeptide repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 569.0
SYD3_k127_6343220_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009073 364.0
SYD3_k127_6343220_2 phosphoheptose isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000004168 236.0
SYD3_k127_6343220_3 PFAM NAD dependent epimerase dehydratase family K07071 - - 0.00000000000000000000000000000000000000000000000000000000008276 216.0
SYD3_k127_6343220_4 peptidase M23 - - - 0.0000000000000000000000000000000000000000000000000000005286 203.0
SYD3_k127_6343220_5 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000000000000000000225 139.0
SYD3_k127_6343220_6 Acetyl propionyl-CoA carboxylase alpha subunit K01960 - 6.4.1.1 0.000000000000000000000000000101 121.0
SYD3_k127_6343220_7 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.0000000000000007972 87.0
SYD3_k127_6442884_0 protein involved in exopolysaccharide biosynthesis - - - 0.0 1039.0
SYD3_k127_6442884_1 Integral membrane protein TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 475.0
SYD3_k127_6442884_2 GDSL-like Lipase/Acylhydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002465 298.0
SYD3_k127_6442884_3 Chain length determinant protein - - - 0.0000000000000000000000000000000000000000000000000000000001589 218.0
SYD3_k127_6442884_4 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA - - - 0.000000000000000000000000000000000006783 141.0
SYD3_k127_6442884_5 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K04757 - 2.7.11.1 0.0000000000000000000000000000001921 127.0
SYD3_k127_6442884_6 GIY-YIG catalytic domain K07461 - - 0.00000288 49.0
SYD3_k127_654278_0 Cys/Met metabolism PLP-dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004889 475.0
SYD3_k127_654278_1 FMN-dependent dehydrogenase K00101,K00467 - 1.1.2.3,1.13.12.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 406.0
SYD3_k127_654278_2 PFAM von Willebrand factor type A domain K07114 - - 0.0000000000000000000000000000000000000000000000000000002739 202.0
SYD3_k127_6595224_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1232.0
SYD3_k127_6595224_1 ligase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006829 589.0
SYD3_k127_6595224_10 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002248 261.0
SYD3_k127_6595224_11 Domain of unknown function (DUF4956) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001939 246.0
SYD3_k127_6595224_12 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000009997 210.0
SYD3_k127_6595224_13 mechanosensitive ion channel K22044 - - 0.000000000000000000000000000000000000000000000000000005767 201.0
SYD3_k127_6595224_14 Outer membrane efflux protein - - - 0.000000000000000000000000000203 129.0
SYD3_k127_6595224_15 - - - - 0.0000000000000000000000000004002 122.0
SYD3_k127_6595224_16 agmatine deiminase activity K08589,K10536 GO:0003674,GO:0003824,GO:0004175,GO:0004197,GO:0004198,GO:0005488,GO:0005509,GO:0005575,GO:0005576,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0016787,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.22.37,3.5.3.12 0.0000000000000000003296 92.0
SYD3_k127_6595224_17 receptor - - - 0.0000005859 51.0
SYD3_k127_6595224_2 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006926 594.0
SYD3_k127_6595224_3 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 561.0
SYD3_k127_6595224_4 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 554.0
SYD3_k127_6595224_5 Mg2 transporter protein, CorA family protein K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009851 405.0
SYD3_k127_6595224_6 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 396.0
SYD3_k127_6595224_7 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006986 387.0
SYD3_k127_6595224_8 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006243 365.0
SYD3_k127_6595224_9 Prokaryotic glutathione synthetase, ATP-grasp domain K01920 - 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000006713 270.0
SYD3_k127_660842_0 AAA ATPase domain - - - 0.0 2123.0
SYD3_k127_660842_1 TonB-dependent Receptor Plug Domain - - - 1.396e-298 937.0
SYD3_k127_660842_10 gamma-glutamylcyclotransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 321.0
SYD3_k127_660842_11 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000453 303.0
SYD3_k127_660842_12 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002114 297.0
SYD3_k127_660842_13 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000003624 190.0
SYD3_k127_660842_2 - - - - 6.193e-207 650.0
SYD3_k127_660842_3 Phosphoesterase family - - - 4.327e-202 656.0
SYD3_k127_660842_4 Ribosomal protein S6 modification K01920 - 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 427.0
SYD3_k127_660842_6 ergothioneine biosynthetic process K01919 GO:0003674,GO:0003824,GO:0004357,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016874,GO:0016879,GO:0016881,GO:0044464,GO:0071944 6.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 399.0
SYD3_k127_660842_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 351.0
SYD3_k127_660842_9 Nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 345.0
SYD3_k127_6625131_0 TIGRFAM formate dehydrogenase, alpha subunit, archaeal-type K00123,K18332 - 1.12.1.3,1.17.1.9 0.0 1414.0
SYD3_k127_6625131_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 4.659e-273 849.0
SYD3_k127_6625131_2 Molybdenum cofactor biosynthesis protein K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 413.0
SYD3_k127_6625131_3 - - - - 0.000000000000000000000000000000002579 134.0
SYD3_k127_6625131_4 Helix-turn-helix XRE-family like proteins K07729 - - 0.000000000000000000000003667 103.0
SYD3_k127_6625131_5 FdhD/NarQ family K02379 - - 0.0000000000000003815 79.0
SYD3_k127_6626854_0 Aldehyde dehydrogenase family K00294,K13821 - 1.2.1.88,1.5.5.2 7.984e-263 818.0
SYD3_k127_6626854_1 glycosyl transferase family 2 K07011 - - 2.465e-217 692.0
SYD3_k127_6626854_10 - - - - 0.000000000000000000000491 106.0
SYD3_k127_6626854_11 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000001176 92.0
SYD3_k127_6626854_2 Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 570.0
SYD3_k127_6626854_3 Alpha amylase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002644 474.0
SYD3_k127_6626854_4 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000000001812 232.0
SYD3_k127_6626854_5 membrane protein (homolog of Drosophila rhomboid) - - - 0.00000000000000000000000000000000000000000000001253 178.0
SYD3_k127_6626854_6 Pseudouridine synthase K06179,K06180 - 5.4.99.23,5.4.99.24 0.0000000000000000000000000000000000000000000003504 175.0
SYD3_k127_6626854_7 Pfam Phospholipase Carboxylesterase - - - 0.00000000000000000000000000000000000000002592 160.0
SYD3_k127_6626854_8 Integral membrane protein (intg_mem_TP0381) - - - 0.0000000000000000000000000000000000000007075 158.0
SYD3_k127_6626854_9 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000002573 136.0
SYD3_k127_6644468_0 Motility related/secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031 418.0
SYD3_k127_6644468_1 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000009882 229.0
SYD3_k127_6644468_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000007405 201.0
SYD3_k127_6666614_0 Peptidase, S8 S53 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 364.0
SYD3_k127_6666614_1 Belongs to the glycosyl hydrolase 18 family K01183 - 3.2.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 294.0
SYD3_k127_6666614_2 - - - - 0.00000000000000004855 86.0
SYD3_k127_6666614_3 guanyl-nucleotide exchange factor activity - - - 0.0000000001392 72.0
SYD3_k127_6676666_0 Belongs to the glycosyl hydrolase 13 family - - - 2.08e-257 822.0
SYD3_k127_6676666_1 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 342.0
SYD3_k127_6676666_2 PFAM Aminotransferase, class IV K00824,K00826 - 2.6.1.21,2.6.1.42 0.0000000000000000000000000000000000000000000000000000000007346 213.0
SYD3_k127_6676666_3 GlcNAc-PI de-N-acetylase K01463 - - 0.0000000000000000000000000000000002989 141.0
SYD3_k127_6676666_4 Glycosyl transferases group 1 - - - 0.000000000000000003081 96.0
SYD3_k127_6676666_5 metallopeptidase activity - - - 0.0000000002161 74.0
SYD3_k127_6681220_0 cobalamin-transporting ATPase activity K02014,K16092 - - 0.000000000000000000000000000000000000000000000000000000007734 223.0
SYD3_k127_6681220_1 - - - - 0.000000000000004136 79.0
SYD3_k127_6681220_2 - - - - 0.0006811 46.0
SYD3_k127_6691883_0 Chaperone of endosialidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009531 377.0
SYD3_k127_6691883_1 Chaperone of endosialidase - - - 0.000000000000000000000000000000000000000000000000000000000001801 225.0
SYD3_k127_6691883_2 Histidine kinase - - - 0.00000000000000000000000000000002785 146.0
SYD3_k127_6706330_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1122.0
SYD3_k127_6706330_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004385 577.0
SYD3_k127_6706330_10 secondary active sulfate transmembrane transporter activity - - - 0.00000000000000000000000003165 116.0
SYD3_k127_6706330_2 glucose-1-phosphate adenylyltransferase K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 544.0
SYD3_k127_6706330_3 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007733 448.0
SYD3_k127_6706330_4 Phage shock protein A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007068 400.0
SYD3_k127_6706330_5 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 385.0
SYD3_k127_6706330_6 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003992 341.0
SYD3_k127_6706330_7 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000392 189.0
SYD3_k127_6706330_8 Universal stress protein - - - 0.00000000000000000000000000000000003098 144.0
SYD3_k127_6706330_9 - - - - 0.000000000000000000000000006107 117.0
SYD3_k127_6713940_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 2.843e-284 884.0
SYD3_k127_6713940_1 M6 family metalloprotease domain protein - - - 1.456e-268 848.0
SYD3_k127_6713940_10 Domain of unknown function (DUF4270) - - - 0.000000000000000000000000000000001386 146.0
SYD3_k127_6713940_11 Belongs to the peptidase S8 family - - - 0.00007909 55.0
SYD3_k127_6713940_2 Male sterility protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004197 346.0
SYD3_k127_6713940_3 PFAM Starch synthase, catalytic domain K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 342.0
SYD3_k127_6713940_4 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 289.0
SYD3_k127_6713940_5 oligosaccharyl transferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004806 276.0
SYD3_k127_6713940_6 SelR domain K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000001125 239.0
SYD3_k127_6713940_7 Domain of unknown function (DUF4290) - - - 0.00000000000000000000000000000000000000000000005497 178.0
SYD3_k127_6713940_8 - - - - 0.00000000000000000000000000000000000000003672 174.0
SYD3_k127_6713940_9 Methyltransferase FkbM domain - - - 0.000000000000000000000000000000000003396 142.0
SYD3_k127_6777906_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 2.26e-243 762.0
SYD3_k127_6777906_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.368e-197 623.0
SYD3_k127_6782677_0 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 471.0
SYD3_k127_6782677_1 tRNA nucleotidyltransferase K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 355.0
SYD3_k127_6782677_2 - catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 0.0000000000000000000000000000000000000000000000000000000002495 210.0
SYD3_k127_6782677_3 Domain of unknown function (DUF4249) - - - 0.00000000000000000003921 101.0
SYD3_k127_6782677_4 - - - - 0.000000000000000002873 85.0
SYD3_k127_6869009_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1437.0
SYD3_k127_6869009_1 membrane protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 378.0
SYD3_k127_6869009_10 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000001934 124.0
SYD3_k127_6869009_12 COG NOG17292 non supervised orthologous group - - - 0.000000000000008945 75.0
SYD3_k127_6869009_13 - - - - 0.000002223 59.0
SYD3_k127_6869009_2 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 368.0
SYD3_k127_6869009_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 341.0
SYD3_k127_6869009_4 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 330.0
SYD3_k127_6869009_5 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004522 329.0
SYD3_k127_6869009_6 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009647 259.0
SYD3_k127_6869009_7 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K07025 - - 0.0000000000000000000000000000000000000000001583 167.0
SYD3_k127_6869009_8 Thioredoxin - - - 0.00000000000000000000000000000000000000001857 158.0
SYD3_k127_6869009_9 D-alanyl-D-alanine carboxypeptidase - - - 0.000000000000000000000000000000000000005584 156.0
SYD3_k127_6875882_0 COGs COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase - - - 2.433e-320 987.0
SYD3_k127_6875882_1 PAP2 superfamily - - - 1.279e-203 647.0
SYD3_k127_6875882_2 Pyruvate ferredoxin/flavodoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 541.0
SYD3_k127_6875882_3 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000007719 254.0
SYD3_k127_6875882_4 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000001104 186.0
SYD3_k127_6875882_5 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000704 164.0
SYD3_k127_6875882_6 YjbR - - - 0.000000000000000000000000000000001797 132.0
SYD3_k127_6875882_7 Methyltransferase domain - - - 0.000000002233 67.0
SYD3_k127_6882070_0 ASPIC and UnbV - - - 2.195e-217 699.0
SYD3_k127_6882070_1 PFAM cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000001347 213.0
SYD3_k127_6882070_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000002709 205.0
SYD3_k127_6882070_3 Outer membrane protein beta-barrel domain - - - 0.00000000000000000001117 99.0
SYD3_k127_6941804_0 Damage-inducible protein DinB - - - 0.0000000000000000000000000000000000000000000000000000000000000001717 224.0
SYD3_k127_6941804_1 - - - - 0.000000000000000000000000000000000000001463 156.0
SYD3_k127_6941804_2 PFAM FecR protein - - - 0.00000000000000000000000000000000000003662 151.0
SYD3_k127_6941804_3 HRDC domain - - - 0.000000000000000000000000000000000003175 144.0
SYD3_k127_6941804_4 - - - - 0.000000000000000000000000000000871 128.0
SYD3_k127_6941804_5 Sigma-70, region 4 - - - 0.000000000000000000000000000001973 127.0
SYD3_k127_6941804_6 methyltransferase - - - 0.00001262 49.0
SYD3_k127_694626_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 9.933e-295 921.0
SYD3_k127_694626_1 Conserved Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 482.0
SYD3_k127_694626_2 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 359.0
SYD3_k127_694626_3 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000002311 183.0
SYD3_k127_694626_4 Sulfotransferase family - - - 0.0000000000001203 76.0
SYD3_k127_6958727_0 Isocitrate dehydrogenase K00031 - 1.1.1.42 1.72e-219 686.0
SYD3_k127_6958727_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 519.0
SYD3_k127_6958727_2 ligase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009289 317.0
SYD3_k127_6958727_3 metallopeptidase activity K12287 - - 0.0000000000000000000000000000000000000000000000000000000000000001415 233.0
SYD3_k127_6958727_4 Transport and Golgi organisation 2 - - - 0.000000000000000000000000000000000000000000000002739 183.0
SYD3_k127_6958727_6 Phosphohydrolase - - - 0.0000000000000000000000000000000000000000000424 168.0
SYD3_k127_6958727_7 DinB family - - - 0.000000000000000000000000000002831 126.0
SYD3_k127_6958727_8 LysE type translocator - - - 0.0000000000000000000082 100.0
SYD3_k127_6958727_9 - - - - 0.0000000000347 73.0
SYD3_k127_6980483_0 self proteolysis K01218 - 3.2.1.78 0.000000000003988 79.0
SYD3_k127_6980483_1 PFAM Hemolysin-type calcium-binding repeat (2 copies) - - - 0.0000000009524 69.0
SYD3_k127_6980604_0 GTP-binding protein TypA K06207 - - 5.842e-239 744.0
SYD3_k127_6980604_1 - - - - 0.000000000000000001571 95.0
SYD3_k127_6980604_2 - K17713 - - 0.000000002122 69.0
SYD3_k127_7029243_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000476 279.0
SYD3_k127_7029243_1 Transglycosylase SLT domain K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001827 276.0
SYD3_k127_7029243_10 PFAM BlaR1 peptidase M56 - - - 0.00000000000002992 72.0
SYD3_k127_7029243_11 - - - - 0.0000000351 61.0
SYD3_k127_7029243_2 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.000000000000000000000000000000000000000000000000000000000000000000001272 250.0
SYD3_k127_7029243_3 NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000005621 199.0
SYD3_k127_7029243_4 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000001799 183.0
SYD3_k127_7029243_5 Putative zincin peptidase - - - 0.00000000000000000000000000000000008808 141.0
SYD3_k127_7029243_6 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000001239 128.0
SYD3_k127_7029243_7 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000003733 91.0
SYD3_k127_7029243_8 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000001988 81.0
SYD3_k127_7049420_0 PFAM Peptidase family S41 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 343.0
SYD3_k127_7049420_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006172 303.0
SYD3_k127_7049420_2 PFAM Glycosyl transferase family 2 K12984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005012 273.0
SYD3_k127_7049420_3 serine-type peptidase activity K08676 - - 0.0000000000000000000000000000000000000000000000000000000000004257 213.0
SYD3_k127_7049420_4 Leucine-rich repeat (LRR) protein - - - 0.00000000000000000000000000000000002682 154.0
SYD3_k127_7049420_5 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000003458 115.0
SYD3_k127_7049420_7 guanyl-nucleotide exchange factor activity - - - 0.00000001091 68.0
SYD3_k127_7062172_0 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003242 476.0
SYD3_k127_7062172_1 OmpA MotB domain protein K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009564 374.0
SYD3_k127_7062172_2 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003699 280.0
SYD3_k127_7069483_0 Peptide-N-glycosidase F, C terminal - - - 1.222e-249 797.0
SYD3_k127_7076218_0 ribonuclease, Rne Rng family K08301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003935 378.0
SYD3_k127_7076218_1 PFAM YicC-like family, N-terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001588 263.0
SYD3_k127_7076218_2 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000005332 224.0
SYD3_k127_7076218_3 COGs COG1670 Acetyltransferase including N-acetylase of ribosomal protein K03790 - 2.3.1.128 0.00000000000000000000000000000000000000000000000000000009809 200.0
SYD3_k127_7076218_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000003074 182.0
SYD3_k127_7076218_5 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.0000000000000000000000000000000000000001038 158.0
SYD3_k127_7076218_6 Belongs to the bacterial histone-like protein family K03530 - - 0.000000000000000000000000000000000000002176 148.0
SYD3_k127_7076218_7 protein affecting Mg2 Co2 transport K06195 - - 0.000000000000000000000000000000009319 131.0
SYD3_k127_7076218_8 - - - - 0.0000001598 52.0
SYD3_k127_7102276_0 IMG reference gene - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003744 363.0
SYD3_k127_7102276_1 domain, Protein K01406,K20276 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009405,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0031638,GO:0043170,GO:0044238,GO:0044419,GO:0051604,GO:0051704,GO:0071704,GO:0140096,GO:1901564 3.4.24.40 0.0000000000000000000001062 117.0
SYD3_k127_7102276_2 - - - - 0.000003881 62.0
SYD3_k127_7102276_3 Domain of unknown function DUF11 - - - 0.00004583 59.0
SYD3_k127_7135098_1 ATPases associated with a variety of cellular activities K09691 - - 0.0000000000000000000000000000000000000000000000000000000000000000002373 234.0
SYD3_k127_7135098_2 BNR repeat-like domain - - - 0.00002677 57.0
SYD3_k127_7146404_0 hemolysin activation secretion protein - - - 5.638e-269 864.0
SYD3_k127_7146404_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 484.0
SYD3_k127_72373_0 PFAM glycoside hydrolase family 3 - - - 2.205e-210 677.0
SYD3_k127_72373_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004706 523.0
SYD3_k127_72373_2 transcription regulator containing HTH domain K18831 - - 0.000000000000000000000000000000000000000001434 158.0
SYD3_k127_72373_3 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system K19166 - - 0.000000000000000000000000000000000000003394 149.0
SYD3_k127_7270122_0 Zn peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000704 587.0
SYD3_k127_7270122_1 DNA polymerase III, epsilon subunit K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 444.0
SYD3_k127_7270122_2 PFAM Uncharacterised conserved protein UCP016719 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 409.0
SYD3_k127_7270122_3 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000009173 250.0
SYD3_k127_7270122_4 Domain of unknown function (DUF4411) - - - 0.00000000000000000000000000000000000000000000000000006222 192.0
SYD3_k127_7270122_5 water channel activity K02440,K06188 - - 0.00000000000000000000000000000000000000000001255 171.0
SYD3_k127_7270122_6 type I restriction-modification system K03427 - 2.1.1.72 0.00000000000000000000000000000003317 126.0
SYD3_k127_7270122_7 - - - - 0.00000000000000000000000000000368 123.0
SYD3_k127_7282518_0 Outer membrane protein beta-barrel family - - - 3.276e-229 736.0
SYD3_k127_7282518_1 Y_Y_Y domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 546.0
SYD3_k127_7282518_2 Transporter associated domain K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009733 345.0
SYD3_k127_7282518_3 TonB-dependent receptor plug K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009026 311.0
SYD3_k127_7282518_4 Domain of unknown function (DUF4465) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003403 267.0
SYD3_k127_7282518_5 Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005577 257.0
SYD3_k127_7282518_6 YceI-like domain - - - 0.0000000000000000000000000000000000000000009014 163.0
SYD3_k127_7282518_7 Lipopolysaccharide-assembly, LptC-related - - - 0.00000000000000000000000009203 115.0
SYD3_k127_7282518_8 Polymorphic membrane protein Chlamydia - - - 0.000005616 57.0
SYD3_k127_7329837_0 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006233 435.0
SYD3_k127_7329837_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639,K20967 - 4.1.99.22,4.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002737 418.0
SYD3_k127_7329837_10 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003983 277.0
SYD3_k127_7329837_11 COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) K05770 - - 0.000000000000000000000000000000000000000000002716 172.0
SYD3_k127_7329837_12 NlpE N-terminal domain - - - 0.00000000000000000000000000000000000006023 147.0
SYD3_k127_7329837_13 PFAM Uncharacterised protein family UPF0150 - - - 0.00000000000000000000000004409 109.0
SYD3_k127_7329837_14 response to heat K03668,K09914 - - 0.0000000000000000000008757 101.0
SYD3_k127_7329837_15 HicA toxin of bacterial toxin-antitoxin, - - - 0.00000000000000000001014 93.0
SYD3_k127_7329837_16 ThiS family - - - 0.000001891 55.0
SYD3_k127_7329837_2 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003077 417.0
SYD3_k127_7329837_3 permease protein PstA K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 393.0
SYD3_k127_7329837_4 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004044 389.0
SYD3_k127_7329837_5 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 372.0
SYD3_k127_7329837_6 MoeA C-terminal region (domain IV) K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 359.0
SYD3_k127_7329837_7 PFAM Integral membrane protein TerC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003813 307.0
SYD3_k127_7329837_8 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 297.0
SYD3_k127_7329837_9 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005004 285.0
SYD3_k127_7344440_0 Amidohydrolase family - - - 2.663e-265 823.0
SYD3_k127_7344440_1 Carboxypeptidase regulatory-like domain - - - 3.2e-260 823.0
SYD3_k127_7344440_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 593.0
SYD3_k127_7344440_3 PFAM peptidase T2 asparaginase 2 K01444,K13051 - 3.4.19.5,3.5.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006382 413.0
SYD3_k127_7344440_4 - - - - 0.0000000000000000000000005248 114.0
SYD3_k127_7344440_5 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000004375 82.0
SYD3_k127_7348741_0 Cytochrome C assembly protein - - - 0.0 1187.0
SYD3_k127_7348741_1 heat shock protein binding - - - 1.089e-219 698.0
SYD3_k127_7348741_10 MazG nucleotide pyrophosphohydrolase domain - - - 0.00000000000000000000000000000000001041 138.0
SYD3_k127_7348741_11 Ndr family - - - 0.0000000000000000000000000000000000374 143.0
SYD3_k127_7348741_12 - - - - 0.00000000000000000000000000000000137 137.0
SYD3_k127_7348741_13 Class III cytochrome C family - - - 0.00000000004643 78.0
SYD3_k127_7348741_14 PFAM HhH-GPD superfamily base excision DNA repair protein K03575 - - 0.0001187 48.0
SYD3_k127_7348741_2 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008213 610.0
SYD3_k127_7348741_3 L-lysine 6-monooxygenase (NADPH-requiring) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 550.0
SYD3_k127_7348741_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007381 418.0
SYD3_k127_7348741_5 PFAM Alanine dehydrogenase PNT K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000878 400.0
SYD3_k127_7348741_6 4 iron, 4 sulfur cluster binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001124 269.0
SYD3_k127_7348741_7 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000001175 258.0
SYD3_k127_7348741_8 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000000000000000000000000004569 214.0
SYD3_k127_7348741_9 - - - - 0.0000000000000000000000000000000000000000001026 170.0
SYD3_k127_7365858_0 PFAM FAD dependent oxidoreductase K15736 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004497 467.0
SYD3_k127_7365858_1 GIY-YIG catalytic domain K07461 - - 0.00000000000000000000000000000004247 128.0
SYD3_k127_7450504_0 COGs COG2192 carbamoyl transferase NodU family K00612 - - 4.39e-199 627.0
SYD3_k127_7450504_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007571 566.0
SYD3_k127_7450504_2 COGs COG0463 Glycosyltransferase involved in cell wall biogenesis K13002 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 327.0
SYD3_k127_7450504_3 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 309.0
SYD3_k127_7452123_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006118 366.0
SYD3_k127_7452123_1 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001699 276.0
SYD3_k127_7470920_0 beta-lactamase - - - 4.903e-254 788.0
SYD3_k127_7470920_1 Thermolysin metallopeptidase, catalytic domain K01400 - 3.4.24.28 1.686e-220 721.0
SYD3_k127_7470920_2 Amidohydrolase family - - - 3.493e-196 629.0
SYD3_k127_7470920_3 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 389.0
SYD3_k127_7470920_4 Glycosyl transferase, family 9 K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 345.0
SYD3_k127_7470920_5 Pyridoxal-phosphate dependent enzyme K01697,K01738 - 2.5.1.47,4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 306.0
SYD3_k127_7470920_6 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001312 276.0
SYD3_k127_7470920_7 - - - - 0.000000005577 63.0
SYD3_k127_7471519_0 Psort location OuterMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 566.0
SYD3_k127_7471519_1 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 471.0
SYD3_k127_7471519_2 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000001666 187.0
SYD3_k127_7471519_3 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000017 130.0
SYD3_k127_7518566_0 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006958 440.0
SYD3_k127_7518566_1 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000485 379.0
SYD3_k127_7518566_2 PFAM Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000000000000003336 182.0
SYD3_k127_7518566_3 Cation transporter K11741 - - 0.000000000000000000000000000000000000000000127 162.0
SYD3_k127_7518566_4 Psort location CytoplasmicMembrane, score 10.00 - - - 0.00000000000001318 77.0
SYD3_k127_7542589_0 PFAM NAD dependent epimerase dehydratase family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003484 412.0
SYD3_k127_7542589_1 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000004931 205.0
SYD3_k127_7542589_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000003334 211.0
SYD3_k127_7542589_3 translation initiation factor activity K06996 - - 0.0000000000000000000000000000000000000000002283 161.0
SYD3_k127_7542589_4 zinc metalloprotease - - - 0.0000000000000000000000000000001682 134.0
SYD3_k127_7542589_5 Transmembrane family 220, helix - - - 0.000000000000000000007437 98.0
SYD3_k127_7548787_0 PFAM Peptidase family M20 M25 M40 - - - 3.506e-214 672.0
SYD3_k127_7548787_1 Leukotriene A4 hydrolase, C-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 612.0
SYD3_k127_7548787_10 Interferon-induced transmembrane protein - - - 0.0000000000000000000000000001443 120.0
SYD3_k127_7548787_12 Protein of unknown function (DUF2752) - - - 0.0000000000000000000265 95.0
SYD3_k127_7548787_2 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 338.0
SYD3_k127_7548787_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 317.0
SYD3_k127_7548787_4 SMART Metal-dependent phosphohydrolase, HD region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000081 321.0
SYD3_k127_7548787_5 COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA K06169 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 304.0
SYD3_k127_7548787_6 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 291.0
SYD3_k127_7548787_7 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002161 280.0
SYD3_k127_7548787_8 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000009254 256.0
SYD3_k127_7548787_9 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K03772,K03773 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000001649 242.0
SYD3_k127_7572324_0 C-terminal domain of CHU protein family - - - 0.0 1367.0
SYD3_k127_7572324_1 Conserved repeat domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 452.0
SYD3_k127_7572324_10 Belongs to the peptidase S8 family - - - 0.000000000000003927 87.0
SYD3_k127_7572324_11 Involved in the tonB-independent uptake of proteins - - - 0.000000000004872 83.0
SYD3_k127_7572324_12 endonuclease exonuclease phosphatase - - - 0.0000008761 60.0
SYD3_k127_7572324_13 Endonuclease Exonuclease Phosphatase - - - 0.000002507 64.0
SYD3_k127_7572324_14 domain protein - - - 0.00001836 58.0
SYD3_k127_7572324_2 Dystroglycan-type cadherin-like domains. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007429 450.0
SYD3_k127_7572324_3 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000005471 226.0
SYD3_k127_7572324_4 Conserved repeat domain - - - 0.000000000000000000000000000000000007506 157.0
SYD3_k127_7572324_5 Diacylglycerol kinase K00887,K00901 - 2.7.1.107,2.7.1.66 0.00000000000000000000000004482 113.0
SYD3_k127_7572324_6 Protein of unknown function (DUF3494) - - - 0.000000000000000000000007715 119.0
SYD3_k127_7572324_7 - - - - 0.00000000000000000000000808 122.0
SYD3_k127_7572324_8 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000001125 114.0
SYD3_k127_7572324_9 oxidoreductase activity - - - 0.000000000000000007682 101.0
SYD3_k127_759854_0 IMG reference gene - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 314.0
SYD3_k127_759854_1 amine dehydrogenase activity - - - 0.000000000000000000000000000000006033 144.0
SYD3_k127_7682871_0 IMG reference gene - - - 0.000000000000000000000000000000000000000005532 179.0
SYD3_k127_7682871_1 Domain of unknown function DUF11 - - - 0.0009329 53.0
SYD3_k127_7698935_0 Immunoglobulin like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 595.0
SYD3_k127_7698935_1 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 437.0
SYD3_k127_7698935_10 phosphoesterase, PA-phosphatase related - - - 0.0000000000000000000000000000000000001064 149.0
SYD3_k127_7698935_11 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000001162 128.0
SYD3_k127_7698935_12 TIGRFAM gliding motility-associated lipoprotein GldD - - - 0.0000000000000001098 81.0
SYD3_k127_7698935_13 oxidoreductase activity - - - 0.00001435 60.0
SYD3_k127_7698935_14 COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K03088 - - 0.0001966 52.0
SYD3_k127_7698935_2 COGs COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 329.0
SYD3_k127_7698935_3 gluconolactonase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000001264 245.0
SYD3_k127_7698935_4 Type IX secretion system membrane protein PorP/SprF - - - 0.000000000000000000000000000000000000000000000000000000000000000003039 238.0
SYD3_k127_7698935_5 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000002431 243.0
SYD3_k127_7698935_6 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000006533 237.0
SYD3_k127_7698935_7 PFAM Phosphoribosyl transferase domain K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000003601 202.0
SYD3_k127_7698935_8 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000000002275 199.0
SYD3_k127_7698935_9 Protein of unknown function (DUF1572) - - - 0.00000000000000000000000000000000000000000000000000002883 192.0
SYD3_k127_771529_0 oxidoreductase activity - - - 0.00004202 57.0
SYD3_k127_771529_1 Glucose / Sorbosone dehydrogenase - - - 0.00009637 55.0
SYD3_k127_7722199_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004863 376.0
SYD3_k127_7722199_1 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000000944 119.0
SYD3_k127_7722199_2 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 0.00000000000000000001305 96.0
SYD3_k127_7722199_3 Protein of unknown function (DUF3089) - - - 0.0000000005226 60.0
SYD3_k127_7759653_0 COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008808 462.0
SYD3_k127_7759653_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 302.0
SYD3_k127_7759653_2 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) K06169 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003568 249.0
SYD3_k127_7759653_3 Endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000005268 210.0
SYD3_k127_7759653_4 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000002451 124.0
SYD3_k127_77871_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1059.0
SYD3_k127_77871_1 alginic acid biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 469.0
SYD3_k127_77871_2 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001391 246.0
SYD3_k127_77871_3 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02622 - - 0.000000000000000000000000000000000000000000000000000000000000001746 220.0
SYD3_k127_77871_4 Y_Y_Y domain - - - 0.00000000000000000000000000000000000000000000000000000000000006778 222.0
SYD3_k127_77871_5 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000000000000000000006646 183.0
SYD3_k127_77871_6 Protein of unknown function (DUF1648) - - - 0.00000000000000000000000001101 116.0
SYD3_k127_7838984_0 PQQ-like domain - - - 4.334e-209 669.0
SYD3_k127_7838984_1 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 375.0
SYD3_k127_7838984_2 short-chain dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 367.0
SYD3_k127_7838984_3 PFAM NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 325.0
SYD3_k127_7838984_4 cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001845 270.0
SYD3_k127_7838984_5 metallopeptidase activity K12287 - - 0.00000000000000000000000000000000000000000000000000000005036 224.0
SYD3_k127_7838984_6 - - - - 0.00000000007397 76.0
SYD3_k127_7866530_0 4-hydroxyphenylpyruvate dioxygenase K00457 - 1.13.11.27 7.835e-203 636.0
SYD3_k127_7866530_1 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 1.927e-197 620.0
SYD3_k127_7866530_2 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003471 355.0
SYD3_k127_7880567_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 362.0
SYD3_k127_7880567_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 335.0
SYD3_k127_7880567_2 - - - - 0.0000000000000000000000000000000000000000000000000000009774 198.0
SYD3_k127_7880567_3 alginic acid biosynthetic process K01176 - 3.2.1.1 0.00000000000000000000000000000000000000000000000001062 186.0
SYD3_k127_7880567_4 repeat protein - - - 0.000000000000000000001241 110.0
SYD3_k127_7880567_5 helix_turn_helix, Lux Regulon - - - 0.000000000009326 71.0
SYD3_k127_7882078_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 1.296e-215 692.0
SYD3_k127_7882078_1 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000007314 262.0
SYD3_k127_7882078_2 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000000000000000009584 213.0
SYD3_k127_7904808_0 Protein of unknown function (DUF2723) - - - 6.193e-274 861.0
SYD3_k127_7904808_1 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000003437 208.0
SYD3_k127_7904808_2 peptidase - - - 0.0000000000000000000000000000000000007085 145.0
SYD3_k127_7912683_0 drug metabolite-transporting permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006323 279.0
SYD3_k127_7912683_1 protein secretion - - - 0.000000000000000000000000000000000000000000000000000000517 216.0
SYD3_k127_7928057_0 Cys/Met metabolism PLP-dependent enzyme K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003671 515.0
SYD3_k127_7928057_1 FeS assembly protein SufD K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000007118 231.0
SYD3_k127_7928057_2 transcriptional regulator - - - 0.000000000000000000000000000000000000000000001183 170.0
SYD3_k127_7928057_3 Fe-S metabolism associated domain protein K02426 - - 0.0000000000000000000000000000000000000000002601 168.0
SYD3_k127_7928057_4 metal-sulfur cluster biosynthetic enzyme K02612 - - 0.0000000000000000000000000000001526 133.0
SYD3_k127_7928057_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000002295 82.0
SYD3_k127_7928057_6 PFAM Hemolysin-type calcium-binding repeat (2 copies) - - - 0.000003223 59.0
SYD3_k127_7960199_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 9.97e-262 813.0
SYD3_k127_7960199_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 9.408e-231 724.0
SYD3_k127_7960199_10 TIGRFAM phosphoesterase, MJ0936 family K07095 - - 0.00000000000000000000000000000000000000000000000000003821 192.0
SYD3_k127_7960199_11 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000000000000000000000821 184.0
SYD3_k127_7960199_12 PFAM Uncharacterised protein family UPF0029, Impact, N-terminal - - - 0.0000000000000000000000000000000000000000000000006148 182.0
SYD3_k127_7960199_13 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000008593 171.0
SYD3_k127_7960199_14 isomerase activity - - - 0.0000000000000000000000000000000000000006169 173.0
SYD3_k127_7960199_15 leucine binding - - - 0.0000000000000000000000000000000000002121 157.0
SYD3_k127_7960199_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 2.805e-222 698.0
SYD3_k127_7960199_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000567 609.0
SYD3_k127_7960199_4 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 496.0
SYD3_k127_7960199_5 DoxX family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 437.0
SYD3_k127_7960199_6 Cys/Met metabolism PLP-dependent enzyme K01761 - 4.4.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 347.0
SYD3_k127_7960199_7 COG0604 NADPH quinone reductase and related Zn-dependent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 332.0
SYD3_k127_7960199_8 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009535 296.0
SYD3_k127_7960199_9 Domain of Unknown Function (DUF1599) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001189 235.0
SYD3_k127_797373_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 448.0
SYD3_k127_797373_1 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009945 388.0
SYD3_k127_8061237_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009104 325.0
SYD3_k127_8079245_0 Proprotein convertase P-domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 602.0
SYD3_k127_8079245_1 Putative esterase - - - 0.00000000000000002334 81.0
SYD3_k127_820001_0 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 545.0
SYD3_k127_820001_1 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 409.0
SYD3_k127_820001_2 beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002198 267.0
SYD3_k127_820001_3 - - - - 0.000000000000000000000000000000004035 133.0
SYD3_k127_820001_4 PFAM DinB - - - 0.000000000000000000000000003769 116.0
SYD3_k127_820001_5 phosphoribosylanthranilate isomerase activity K01817 - 5.3.1.24 0.00000051 59.0
SYD3_k127_8265378_0 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 7.785e-251 790.0
SYD3_k127_8265378_1 PFAM Carbamoyl-phosphate synthase L chain, ATP binding K01961,K01965 - 6.3.4.14,6.4.1.2,6.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005264 445.0
SYD3_k127_8266527_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 3.308e-218 697.0
SYD3_k127_8266527_1 - - - - 0.0000000002631 63.0
SYD3_k127_8266527_2 Cytochrome c - - - 0.000000004351 63.0
SYD3_k127_8266527_3 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.000001164 51.0
SYD3_k127_8285134_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1040.0
SYD3_k127_8285134_1 TonB dependent receptor - - - 2.943e-310 983.0
SYD3_k127_8285134_10 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009447 332.0
SYD3_k127_8285134_11 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 318.0
SYD3_k127_8285134_12 PFAM Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 313.0
SYD3_k127_8285134_13 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004089 306.0
SYD3_k127_8285134_14 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889 301.0
SYD3_k127_8285134_15 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005588 296.0
SYD3_k127_8285134_16 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005729 276.0
SYD3_k127_8285134_17 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003236 256.0
SYD3_k127_8285134_18 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000008676 218.0
SYD3_k127_8285134_19 CAAX amino terminal protease family K07052 - - 0.00000000000000000000000000000000000000000000002287 181.0
SYD3_k127_8285134_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 2.849e-263 818.0
SYD3_k127_8285134_20 - - - - 0.00000000000000000000000000000000000000001767 164.0
SYD3_k127_8285134_21 Domain of unknown function (DUF5011) - - - 0.0000000000000000000000000000000000003035 150.0
SYD3_k127_8285134_22 PFAM ABC transporter K02193 - 3.6.3.41 0.000000000000000000000000000000001738 137.0
SYD3_k127_8285134_23 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000005685 135.0
SYD3_k127_8285134_24 PFAM Sigma 54 modulation protein S30EA ribosomal protein K05808 - - 0.00000000000000000000000000003396 119.0
SYD3_k127_8285134_25 GIY-YIG catalytic domain protein K07461 - - 0.0000000000000000000000000004987 117.0
SYD3_k127_8285134_26 Transcriptional regulator - - - 0.000000000000000000000000001002 115.0
SYD3_k127_8285134_27 RNA recognition motif - - - 0.00000000000000000000133 100.0
SYD3_k127_8285134_28 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.0000000000000005178 87.0
SYD3_k127_8285134_29 Lipid-binding putative hydrolase - - - 0.00000000000006965 80.0
SYD3_k127_8285134_3 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 1.04e-234 752.0
SYD3_k127_8285134_32 PFAM conserved - - - 0.00002366 51.0
SYD3_k127_8285134_4 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 1.6e-205 648.0
SYD3_k127_8285134_5 Bacterial sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008744 612.0
SYD3_k127_8285134_6 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 556.0
SYD3_k127_8285134_7 Starch-binding associating with outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 420.0
SYD3_k127_8285134_8 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 397.0
SYD3_k127_8285134_9 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002289 352.0
SYD3_k127_8300101_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 6.481e-199 630.0
SYD3_k127_8300101_1 Domain of unknown function (DUF4394) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006631 533.0
SYD3_k127_8300101_2 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 404.0
SYD3_k127_8300101_3 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000001823 171.0
SYD3_k127_8300101_4 O-Antigen ligase - - - 0.000000000000000000000000000000000000000000001251 169.0
SYD3_k127_8300101_5 Domain of unknown function (DUF4394) - - - 0.0000000000000000000000000000000000000000002492 169.0
SYD3_k127_8300101_6 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000007143 162.0
SYD3_k127_8300101_7 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000005672 152.0
SYD3_k127_8300101_8 Domain of unknown function (DUF4920) - - - 0.00000000000000000000000000000000000001407 151.0
SYD3_k127_8336022_0 Succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1084.0
SYD3_k127_8336022_1 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 2.207e-200 636.0
SYD3_k127_8336022_10 CutC family K06201 - - 0.000000000000000000000000000000000000001981 154.0
SYD3_k127_8336022_11 PFAM outer membrane chaperone Skp (OmpH) K06142 - - 0.0000000000000000000000000000000006872 136.0
SYD3_k127_8336022_12 Membrane - - - 0.00000000000000000000002125 111.0
SYD3_k127_8336022_13 - - - - 0.00000000002376 66.0
SYD3_k127_8336022_14 - - - - 0.00000000005635 65.0
SYD3_k127_8336022_2 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002939 586.0
SYD3_k127_8336022_3 Histidine ammonia-lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005078 486.0
SYD3_k127_8336022_4 involved in cell wall biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005592 402.0
SYD3_k127_8336022_5 Succinate dehydrogenase fumarate reductase Fe-S protein subunit K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 362.0
SYD3_k127_8336022_6 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006723 301.0
SYD3_k127_8336022_7 TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 - - 0.0000000000000000000000000000000000000000000000000000000000000000004182 235.0
SYD3_k127_8336022_8 outer membrane chaperone Skp (OmpH) K06142 - - 0.0000000000000000000000000000000000000000000000000000000353 201.0
SYD3_k127_8336022_9 PFAM Transposase IS200 like - - - 0.0000000000000000000000000000000000000000000000000000008117 199.0
SYD3_k127_8338220_0 Carboxypeptidase regulatory-like domain - - - 1.994e-312 972.0
SYD3_k127_8386837_0 RQC K03654 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003115 619.0
SYD3_k127_8386837_1 Periplasmic copper-binding protein (NosD) K07218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 587.0
SYD3_k127_8386837_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003611 511.0
SYD3_k127_8386837_3 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 341.0
SYD3_k127_8386837_4 ABC-2 family transporter protein K19341 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004889 326.0
SYD3_k127_8386837_5 ATPases associated with a variety of cellular activities K19340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 324.0
SYD3_k127_8386837_6 lipoprotein involved in nitrous oxide reduction K19342 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002253 245.0
SYD3_k127_8386837_7 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.000000000000000000000000000000000000000000000000000000002093 206.0
SYD3_k127_8386837_8 cyclic nucleotide-binding - - - 0.00000000000000000000000000000000000000000000000000175 192.0
SYD3_k127_8386837_9 COG2346, Truncated hemoglobins K06886 - - 0.00000000000000000000000000007103 121.0
SYD3_k127_8399623_0 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 490.0
SYD3_k127_8399623_1 ABC transporter K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 380.0
SYD3_k127_8399623_10 ABC-type phosphate transport system periplasmic K02040 - - 0.0000000000000000000000000000000000000000000000001662 188.0
SYD3_k127_8399623_11 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000009571 122.0
SYD3_k127_8399623_12 TPR repeat - - - 0.000000000000000000000428 104.0
SYD3_k127_8399623_13 Bacterial Ig-like domain - - - 0.00000000004284 64.0
SYD3_k127_8399623_2 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 361.0
SYD3_k127_8399623_3 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003157 360.0
SYD3_k127_8399623_4 PFAM Tetratricopeptide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003807 332.0
SYD3_k127_8399623_5 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 323.0
SYD3_k127_8399623_6 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000219 244.0
SYD3_k127_8399623_7 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000004747 222.0
SYD3_k127_8399623_8 PFAM Biopolymer transport protein ExbD TolR - - - 0.000000000000000000000000000000000000000000000000000000000002837 213.0
SYD3_k127_8399623_9 PFAM Biopolymer transport protein ExbD TolR - - - 0.000000000000000000000000000000000000000000000000000000001522 206.0
SYD3_k127_8463622_0 Pkd domain containing protein - - - 1.079e-257 892.0
SYD3_k127_8463622_1 SPTR CHU large protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 511.0
SYD3_k127_8463622_2 PFAM PKD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005652 392.0
SYD3_k127_8487034_0 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 534.0
SYD3_k127_8487034_1 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000416 376.0
SYD3_k127_8487034_2 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 342.0
SYD3_k127_8487034_3 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000004792 217.0
SYD3_k127_8487034_4 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000006114 157.0
SYD3_k127_8487034_5 - - - - 0.000000000000000000000001635 106.0
SYD3_k127_8541427_0 PFAM Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.0000000000001992 77.0
SYD3_k127_8541427_1 blue (type 1) copper K00368 - 1.7.2.1 0.0000000000007277 83.0
SYD3_k127_8541427_2 Belongs to the peptidase S8 family - - - 0.00000001986 68.0
SYD3_k127_8541427_3 membrane - - - 0.0000003136 64.0
SYD3_k127_8541427_4 COG3794 Plastocyanin - - - 0.000002163 61.0
SYD3_k127_8541427_5 PFAM Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.00007494 46.0
SYD3_k127_8548378_0 transglycosylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005602 331.0
SYD3_k127_8548378_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008149 304.0
SYD3_k127_8548378_2 ROK family K00886 - 2.7.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000002345 246.0
SYD3_k127_8548378_3 COG0471 Di- and tricarboxylate K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000691 236.0
SYD3_k127_8548378_4 Peptidyl-prolyl cis-trans isomerase K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000004394 218.0
SYD3_k127_8548378_5 - - - - 0.000000000000000000000000000000000000004244 149.0
SYD3_k127_8552700_0 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 392.0
SYD3_k127_8552700_1 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000002701 229.0
SYD3_k127_8552700_3 CotH kinase protein - - - 0.00006785 48.0
SYD3_k127_8610709_0 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009279,GO:0009986,GO:0009987,GO:0016020,GO:0016049,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030154,GO:0030312,GO:0030313,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0040007,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044462,GO:0044464,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048869,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 9.704e-197 634.0
SYD3_k127_8610709_1 membrane protein involved in aromatic hydrocarbon degradation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000344 274.0
SYD3_k127_8610709_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000003984 255.0
SYD3_k127_8610709_3 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 0.000000000000000000000000000000000000000000000000000000000000007133 217.0
SYD3_k127_8610709_4 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000009652 163.0
SYD3_k127_8610709_5 energy transducer activity K01181,K03832 - 3.2.1.8 0.0000000000000000009347 100.0
SYD3_k127_8654535_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 3.461e-224 706.0
SYD3_k127_8654535_1 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 316.0
SYD3_k127_8654535_2 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000499 222.0
SYD3_k127_8654535_3 - - - - 0.00000000000000000000000000000000000000000000000000008691 189.0
SYD3_k127_8654535_4 - - - - 0.00000003487 59.0
SYD3_k127_8657_0 Concanavalin A-like lectin/glucanases superfamily - - - 0.0 1786.0
SYD3_k127_8657_1 TonB dependent receptor - - - 0.0 1459.0
SYD3_k127_8657_10 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 299.0
SYD3_k127_8657_2 Concanavalin A-like lectin/glucanases superfamily - - - 0.0 1178.0
SYD3_k127_8657_3 SusD family K21572 - - 1.059e-204 647.0
SYD3_k127_8657_4 beta-1,4-mannooligosaccharide phosphorylase K20885 - 2.4.1.339,2.4.1.340 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008601 518.0
SYD3_k127_8657_5 AraC type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 476.0
SYD3_k127_8657_6 Glycosidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005306 450.0
SYD3_k127_8657_7 ABC transporter K02010,K02017,K10112,K11072 - 3.6.3.29,3.6.3.30,3.6.3.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 437.0
SYD3_k127_8657_8 Binding-protein-dependent transport system inner membrane component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006724 396.0
SYD3_k127_8657_9 Highly conserved protein containing a thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 387.0
SYD3_k127_866521_0 xyloglucan:xyloglucosyl transferase activity K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 461.0
SYD3_k127_866521_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001364 245.0
SYD3_k127_866521_2 peptidase activity, acting on L-amino acid peptides K07752 - 3.4.17.22 0.000000000000000000000000000000003048 149.0
SYD3_k127_866521_3 Thioredoxin K01829 - 5.3.4.1 0.000000000000000000000000000000004528 134.0
SYD3_k127_866521_4 Thioredoxin K01829 - 5.3.4.1 0.00000000000000000000000000001078 125.0
SYD3_k127_866521_6 - - - - 0.00000000000000000868 86.0
SYD3_k127_866521_7 Calcium ion binding K20051 GO:0000902,GO:0000904,GO:0001655,GO:0001822,GO:0001932,GO:0001934,GO:0001941,GO:0001942,GO:0003002,GO:0003674,GO:0004888,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007275,GO:0007389,GO:0007399,GO:0007416,GO:0007528,GO:0008104,GO:0008150,GO:0008544,GO:0009653,GO:0009790,GO:0009798,GO:0009887,GO:0009888,GO:0009893,GO:0009950,GO:0009953,GO:0009954,GO:0009966,GO:0009968,GO:0009986,GO:0009987,GO:0010562,GO:0010604,GO:0010646,GO:0010648,GO:0010721,GO:0010769,GO:0010771,GO:0010975,GO:0010977,GO:0014069,GO:0016020,GO:0016043,GO:0016055,GO:0016358,GO:0017147,GO:0019220,GO:0019222,GO:0019899,GO:0019900,GO:0019901,GO:0022008,GO:0022404,GO:0022405,GO:0022603,GO:0022604,GO:0022607,GO:0023051,GO:0023052,GO:0023057,GO:0030030,GO:0030111,GO:0030154,GO:0030178,GO:0030182,GO:0030278,GO:0030279,GO:0030326,GO:0030424,GO:0030425,GO:0030971,GO:0031175,GO:0031323,GO:0031325,GO:0031344,GO:0031345,GO:0031399,GO:0031401,GO:0031594,GO:0032268,GO:0032270,GO:0032279,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033267,GO:0034185,GO:0034613,GO:0035107,GO:0035108,GO:0035113,GO:0036477,GO:0038023,GO:0040007,GO:0042303,GO:0042325,GO:0042327,GO:0042475,GO:0042476,GO:0042633,GO:0042733,GO:0042802,GO:0042803,GO:0042813,GO:0042995,GO:0043005,GO:0043025,GO:0043113,GO:0043226,GO:0043235,GO:0043588,GO:0043679,GO:0043933,GO:0044085,GO:0044091,GO:0044297,GO:0044306,GO:0044332,GO:0044425,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045202,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0045937,GO:0046983,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048589,GO:0048598,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048736,GO:0048812,GO:0048813,GO:0048856,GO:0048858,GO:0048869,GO:0050730,GO:0050731,GO:0050767,GO:0050768,GO:0050770,GO:0050771,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050808,GO:0050896,GO:0051093,GO:0051124,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051259,GO:0051262,GO:0051290,GO:0051291,GO:0051641,GO:0051668,GO:0051716,GO:0051960,GO:0051961,GO:0060070,GO:0060089,GO:0060173,GO:0060255,GO:0060284,GO:0060341,GO:0060429,GO:0060828,GO:0061024,GO:0065003,GO:0065007,GO:0065008,GO:0070727,GO:0071340,GO:0071709,GO:0071840,GO:0071944,GO:0072001,GO:0072657,GO:0080090,GO:0090090,GO:0097060,GO:0097090,GO:0097104,GO:0097105,GO:0097110,GO:0097447,GO:0097458,GO:0098590,GO:0098773,GO:0098793,GO:0098794,GO:0098984,GO:0099054,GO:0099068,GO:0099172,GO:0099173,GO:0099175,GO:0099572,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0150034,GO:0198738,GO:1901626,GO:1901628,GO:1901629,GO:1901631,GO:1903827,GO:1903829,GO:1903909,GO:1903911,GO:1904393,GO:1904395,GO:1904396,GO:1904398,GO:1905114,GO:1905475,GO:1905477,GO:1990709,GO:1990782,GO:2000026 - 0.000000000000001658 91.0
SYD3_k127_866521_8 Pkd domain containing protein - - - 0.000000000002939 80.0
SYD3_k127_866521_9 Lamin Tail Domain - - - 0.0000001825 66.0
SYD3_k127_8685166_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005801 458.0
SYD3_k127_8685166_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 425.0
SYD3_k127_8685166_2 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 398.0
SYD3_k127_8685166_3 RNA polymerase, sigma-54 factor K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 379.0
SYD3_k127_8685166_4 DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007007 364.0
SYD3_k127_8713457_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 3.6e-234 737.0
SYD3_k127_8713457_1 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000002388 248.0
SYD3_k127_8713457_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion K07798 - - 0.000000000000000000000000000002373 128.0
SYD3_k127_8714568_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2201.0
SYD3_k127_8714568_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2157.0
SYD3_k127_8714568_10 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000009752 214.0
SYD3_k127_8714568_11 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000000000000000000003317 195.0
SYD3_k127_8714568_12 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000002192 170.0
SYD3_k127_8714568_13 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000000000000001653 77.0
SYD3_k127_8714568_14 recombinase activity - - - 0.0001746 44.0
SYD3_k127_8714568_2 C-terminal domain of CHU protein family - - - 5.818e-265 844.0
SYD3_k127_8714568_3 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 485.0
SYD3_k127_8714568_4 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 343.0
SYD3_k127_8714568_5 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 300.0
SYD3_k127_8714568_6 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001444 254.0
SYD3_k127_8714568_7 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000009482 252.0
SYD3_k127_8714568_8 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000001974 235.0
SYD3_k127_8714568_9 Riboflavin synthase K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000001526 221.0
SYD3_k127_8718656_0 HsdM N-terminal domain K03427 - 2.1.1.72 5.852e-272 843.0
SYD3_k127_8718656_1 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 316.0
SYD3_k127_8718656_2 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004287 296.0
SYD3_k127_8718656_3 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000004573 241.0
SYD3_k127_8718656_4 type I restriction modification DNA specificity domain K01154 - 3.1.21.3 0.000000000000000000000000000000000000000000001988 177.0
SYD3_k127_8718656_5 Type I restriction modification DNA specificity domain - - - 0.0000000000000000000000000000000000000000003584 163.0
SYD3_k127_8747415_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 1.113e-239 752.0
SYD3_k127_8747415_1 xyloglucan:xyloglucosyl transferase activity K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 564.0
SYD3_k127_8747415_10 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001249 262.0
SYD3_k127_8747415_11 RibD C-terminal domain K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000001528 237.0
SYD3_k127_8747415_12 PAS domain - - - 0.000000000000000000000000000000000000000000000000000009498 192.0
SYD3_k127_8747415_13 Rifampin ADP-ribosyl transferase - - - 0.000000000000000000000000000000000000000000000002621 174.0
SYD3_k127_8747415_14 Protein of unknown function (DUF2721) - - - 0.0000000000000000000000000000000000000000001151 163.0
SYD3_k127_8747415_15 - - - - 0.00000000000000000000000000000000000000006482 161.0
SYD3_k127_8747415_16 COG0202 DNA-directed RNA polymerase, alpha subunit 40 kD subunit - - - 0.00000000000000000000000000000000000008605 147.0
SYD3_k127_8747415_17 Protein of unknown function DUF86 - - - 0.00000000000000000000000006413 110.0
SYD3_k127_8747415_18 Nucleotidyltransferase domain K07075 - - 0.0000000000000000000000004289 107.0
SYD3_k127_8747415_19 Lamin Tail Domain - - - 0.00006366 57.0
SYD3_k127_8747415_2 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 438.0
SYD3_k127_8747415_3 Alpha/beta hydrolase family K01563,K22318 - 3.8.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 412.0
SYD3_k127_8747415_4 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 366.0
SYD3_k127_8747415_5 3-demethylubiquinone-9 3-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 346.0
SYD3_k127_8747415_6 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 327.0
SYD3_k127_8747415_7 CorA-like Mg2+ transporter protein K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 316.0
SYD3_k127_8747415_8 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007366 270.0
SYD3_k127_8747415_9 PFAM Bacterial regulatory helix-turn-helix proteins, AraC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000377 265.0
SYD3_k127_8806656_0 Cys/Met metabolism PLP-dependent enzyme K01761 - 4.4.1.11 0.0000000000000000000000007634 107.0
SYD3_k127_8806656_1 C-terminal domain of CHU protein family - - - 0.0000002715 64.0
SYD3_k127_8806656_2 Glucose / Sorbosone dehydrogenase - - - 0.0003183 51.0
SYD3_k127_8810892_0 Sigma-54 interaction domain K03405 - 6.6.1.1 4.462e-209 659.0
SYD3_k127_8810892_1 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006263 616.0
SYD3_k127_8810892_10 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000003145 121.0
SYD3_k127_8810892_11 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000000000000001856 117.0
SYD3_k127_8810892_13 Polysaccharide biosynthesis protein K08679 - 5.1.3.6 0.000000000000000157 79.0
SYD3_k127_8810892_2 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005033 537.0
SYD3_k127_8810892_3 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 529.0
SYD3_k127_8810892_4 Protein of unknown function (DUF1800) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 492.0
SYD3_k127_8810892_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 464.0
SYD3_k127_8810892_6 Serine protease, subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009537 347.0
SYD3_k127_8810892_7 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005936 259.0
SYD3_k127_8810892_8 Transposase - - - 0.00000000000000000000000000000000000000000000000000000002113 209.0
SYD3_k127_8810892_9 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000000000000000000000000000000000000000069 193.0
SYD3_k127_8811455_0 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431,K12251 - 3.5.1.53,3.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000704 518.0
SYD3_k127_8811455_1 PFAM Endonuclease Exonuclease phosphatase K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005694 349.0
SYD3_k127_8811455_2 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006679 297.0
SYD3_k127_8811455_3 Divergent 4Fe-4S mono-cluster - - - 0.000000000000000000000000000000000000004436 149.0
SYD3_k127_8835776_0 Glycogen debranching enzyme - - - 3.417e-278 870.0
SYD3_k127_8835776_1 Organic solvent tolerance protein OstA - - - 1.238e-217 706.0
SYD3_k127_8835776_2 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 546.0
SYD3_k127_8835776_3 Cell wall hydrolase autolysin K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 302.0
SYD3_k127_8835776_4 PFAM Pregnancy-associated plasma protein-A - - - 0.00000000000000000000000000000000000000000000000000003619 203.0
SYD3_k127_8835776_5 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000003591 186.0
SYD3_k127_8835776_6 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.0000000000000000000000000000000000003598 150.0
SYD3_k127_8835776_7 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000001121 119.0
SYD3_k127_8835776_8 - - - - 0.000000000000001012 87.0
SYD3_k127_8844349_0 RagB SusD domain protein K21572 - - 4.626e-276 866.0
SYD3_k127_8844349_1 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 8.376e-240 766.0
SYD3_k127_8844349_2 TonB dependent receptor K21573 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009481 566.0
SYD3_k127_8844349_3 TonB dependent receptor K21573 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 487.0
SYD3_k127_8844349_4 SusE outer membrane protein K21571 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007151 299.0
SYD3_k127_8844349_5 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000495 255.0
SYD3_k127_8844349_6 Arabinogalactan endo-beta-1,4-galactanase K01224 - 3.2.1.89 0.00000000008988 68.0
SYD3_k127_8877157_0 PFAM Peptidase M1 membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007858 437.0
SYD3_k127_8877157_1 Domain of Unknown function (DUF542) K07322 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003313 268.0
SYD3_k127_8877157_2 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000003818 185.0
SYD3_k127_8877157_3 - - - - 0.000000000000000000001669 100.0
SYD3_k127_8888686_0 DNA segregation ATPase FtsK SpoIIIE and related K03466 - - 3.205e-291 917.0
SYD3_k127_8888686_1 PFAM GH3 auxin-responsive promoter - - - 4.53e-202 640.0
SYD3_k127_8888686_10 VTC domain - - - 0.0000000000000000000000002256 115.0
SYD3_k127_8888686_11 PFAM Outer membrane lipoprotein carrier protein LolA K03634 - - 0.000000000000001236 85.0
SYD3_k127_8888686_2 Oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007524 508.0
SYD3_k127_8888686_3 flavoprotein K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 421.0
SYD3_k127_8888686_4 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 381.0
SYD3_k127_8888686_5 Saccharopine dehydrogenase C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 375.0
SYD3_k127_8888686_6 cyclic nucleotide binding K03885,K10716 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006269 302.0
SYD3_k127_8888686_7 outer membrane assembly lipoprotein YfiO K05807 - - 0.000000000000000000000000000000000000000000000000000000000000001576 228.0
SYD3_k127_8888686_8 RNA polymerase - - - 0.0000000000000000000000000000004435 125.0
SYD3_k127_8888686_9 IMP dehydrogenase activity K04767,K07182 - - 0.00000000000000000000000000003765 121.0
SYD3_k127_8891715_0 CRP FNR family transcriptional regulator K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005623 242.0
SYD3_k127_8891715_1 Nodulation protein S (NodS) - - - 0.000000000000000000000000000000000000000000000000000000001835 205.0
SYD3_k127_8891715_2 Protein of unknown function (DUF2892) - - - 0.00000000000000006511 84.0
SYD3_k127_8891715_3 Domain of unknown function (DUF5122) beta-propeller - - - 0.000000000000001496 91.0
SYD3_k127_8891715_4 Periplasmic copper-binding protein (NosD) - - - 0.0000001735 64.0
SYD3_k127_8918075_0 PFAM TonB-dependent Receptor K16091 - - 7.556e-261 821.0
SYD3_k127_8918075_1 PFAM Aldehyde dehydrogenase K13877 - 1.2.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 485.0
SYD3_k127_8918075_2 Protein of unknown function (DUF3179) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 432.0
SYD3_k127_8918075_3 Protein of unknown function (DUF3078) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003019 417.0
SYD3_k127_8918075_4 Belongs to the DapA family K01714,K21062 - 3.5.4.22,4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 402.0
SYD3_k127_8918075_5 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000003978 197.0
SYD3_k127_8918075_6 Domain of unknown function (DUF1905) - - - 0.0000000000000000000000000000000000000002787 154.0
SYD3_k127_8918075_7 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.000000000000000000000000000000000000001375 155.0
SYD3_k127_8918075_8 Arabinogalactan endo-beta-1,4-galactanase K01224 - 3.2.1.89 0.00000000000000000000000000000000000003182 147.0
SYD3_k127_8942243_0 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.00000000000000000000000000000000000000000000004552 178.0
SYD3_k127_8942243_1 Belongs to the SUA5 family - - - 0.0000000000000000000000000000000000000001429 157.0
SYD3_k127_8942243_2 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.00000000000000000000000000000002936 126.0
SYD3_k127_8942243_3 heme copper-type cytochrome quinol oxidase, subunit 3 K02276 - 1.9.3.1 0.00000000000000005958 85.0
SYD3_k127_8955331_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 2.631e-250 780.0
SYD3_k127_8955331_1 ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 509.0
SYD3_k127_8955331_2 ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 503.0
SYD3_k127_8955331_3 peptidase activity, acting on L-amino acid peptides K05996 - 3.4.17.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 519.0
SYD3_k127_8955331_4 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000332 383.0
SYD3_k127_8955331_5 PFAM TonB-dependent Receptor Plug - - - 0.0000000000000000000000000000000000000000000000000000000003767 220.0
SYD3_k127_8955331_6 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000007679 151.0
SYD3_k127_8955331_7 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.0000000000000000000000000000000000005125 144.0
SYD3_k127_8955331_8 Signal peptide protein - - - 0.0000000000000000000000000000003372 128.0
SYD3_k127_8955331_9 Signal peptide protein - - - 0.0000000000000000000000000000003922 127.0
SYD3_k127_8958057_0 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002464 387.0
SYD3_k127_8958057_1 ABC-type uncharacterized transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 338.0
SYD3_k127_8958057_2 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000322 287.0
SYD3_k127_8958057_3 PFAM MORN repeat variant - - - 0.0000000004397 68.0
SYD3_k127_8963048_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 334.0
SYD3_k127_8963048_1 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000001732 265.0
SYD3_k127_8963048_2 PFAM histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000002125 223.0
SYD3_k127_8963048_3 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000005251 193.0
SYD3_k127_9035707_0 PA14 K08738 - - 0.0 1303.0
SYD3_k127_9035707_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005362 595.0
SYD3_k127_9035707_2 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 422.0
SYD3_k127_9035707_3 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 368.0
SYD3_k127_9203686_0 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 423.0
SYD3_k127_9203686_1 Belongs to the SEDS family K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 357.0
SYD3_k127_9203686_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005565 262.0
SYD3_k127_9203686_3 Belongs to the SOS response-associated peptidase family - - - 0.00000000000000000000000000000000000000000000000000000000287 207.0
SYD3_k127_9203686_4 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.00000000000000000000000000000000000000000000000000000002177 210.0
SYD3_k127_9203686_5 - - - - 0.00000000000000000000000000000000000000000000000000001674 193.0
SYD3_k127_9203686_6 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4 0.000000000000000000000000000000000000000000000001519 181.0
SYD3_k127_9203686_8 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03749 - - 0.000000188 61.0
SYD3_k127_9203686_9 - - - - 0.000003068 51.0
SYD3_k127_9225783_0 Domain of unknown function (DUF4331) - - - 2.604e-295 913.0
SYD3_k127_9225783_1 Anti-sigma-K factor rskA - - - 0.00000000000000000000000000000000000000000006147 170.0
SYD3_k127_9225783_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000005569 158.0
SYD3_k127_9225783_3 Domain of unknown function (DUF4331) - - - 0.00000000004919 64.0
SYD3_k127_9228712_0 Nucleotidyl transferase K15669 - 2.7.7.71 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 385.0
SYD3_k127_9228712_1 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 285.0
SYD3_k127_9228712_2 - - - - 0.000000000000000000000000000007962 122.0
SYD3_k127_9228712_3 SPTR CHU large protein - - - 0.0000000000000000007083 102.0
SYD3_k127_9229018_0 HipA N-terminal domain K07154 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 415.0
SYD3_k127_9229018_1 - - - - 0.000000000000000000000000000000000000000000000000000000000007792 224.0
SYD3_k127_9229018_2 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000001362 89.0
SYD3_k127_9229018_3 S4 domain K14761 - - 0.000000001036 63.0
SYD3_k127_9229018_4 Bacterial membrane protein YfhO - - - 0.000000002678 61.0
SYD3_k127_9229018_5 - - - - 0.0000000557 56.0
SYD3_k127_9229018_6 glycosyl transferase, family 39 - - - 0.00000006458 66.0
SYD3_k127_9229018_7 endonuclease I - - - 0.000003011 60.0
SYD3_k127_9273770_0 PFAM Y_Y_Y domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 510.0
SYD3_k127_9273770_1 Surface antigen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 364.0
SYD3_k127_9273770_10 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000002333 64.0
SYD3_k127_9273770_2 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007781 303.0
SYD3_k127_9273770_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005565 262.0
SYD3_k127_9273770_4 - - - - 0.0000000000000000000000000000000000000000000000001219 184.0
SYD3_k127_9273770_5 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000003725 186.0
SYD3_k127_9273770_7 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000001835 141.0
SYD3_k127_9273770_8 Lipase (class 3) - - - 0.00000000000000000000000000006222 121.0
SYD3_k127_9273770_9 FtsZ-dependent cytokinesis - - - 0.0000000000000000000001077 109.0
SYD3_k127_9301552_0 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006681 547.0
SYD3_k127_9301552_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 469.0
SYD3_k127_9301552_2 domain protein K13735 - - 0.00000000000000000000000000000004303 135.0
SYD3_k127_93066_0 acyl-CoA dehydrogenase - - - 1.522e-222 704.0
SYD3_k127_93066_1 energy transducer activity K03832 - - 0.0000000000000000000000003022 112.0
SYD3_k127_93066_2 dehydrogenase K13775 - - 0.000000001147 59.0
SYD3_k127_9361207_0 MaoC like domain K02618 - 1.2.1.91,3.3.2.12 4.041e-312 968.0
SYD3_k127_9361207_1 Dihydrolipoyl dehydrogenase K00382 - 1.8.1.4 3.63e-203 642.0
SYD3_k127_9361207_10 COG2812 DNA polymerase III, gamma tau subunits K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000002915 234.0
SYD3_k127_9361207_11 Glutathione peroxidase K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000004015 188.0
SYD3_k127_9361207_12 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000006052 109.0
SYD3_k127_9361207_13 CDP-alcohol phosphatidyltransferase K17103 - 2.7.8.8 0.00000000000000000000000667 111.0
SYD3_k127_9361207_2 CarboxypepD_reg-like domain - - - 3.768e-203 662.0
SYD3_k127_9361207_3 cellulase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 499.0
SYD3_k127_9361207_4 PFAM PSP1 C-terminal conserved region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006472 468.0
SYD3_k127_9361207_5 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 398.0
SYD3_k127_9361207_6 COG1024 Enoyl-CoA hydratase carnithine racemase K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 314.0
SYD3_k127_9361207_7 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008879 287.0
SYD3_k127_9361207_8 Hexapeptide repeat of succinyl-transferase K02617,K08279 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009805 284.0
SYD3_k127_9361207_9 Pfam Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000473 277.0
SYD3_k127_9365599_0 Outer membrane protein assembly complex, YaeT protein K07277 - - 3.661e-295 928.0
SYD3_k127_9365599_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 494.0
SYD3_k127_9365599_2 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 356.0
SYD3_k127_9365599_3 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 361.0
SYD3_k127_9365599_4 Protein of unknown function (DUF3089) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004406 332.0
SYD3_k127_9365599_5 Inorganic pyrophosphatase K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000107 268.0
SYD3_k127_9365599_6 (GNAT) family K03829 - - 0.00000000000000000000000000000000000000000000000000000000139 203.0
SYD3_k127_9365599_7 Outer membrane protein beta-barrel domain - - - 0.0000000000000009987 85.0
SYD3_k127_9365599_8 - - - - 0.00000000000000359 81.0
SYD3_k127_9365599_9 Outer membrane protein beta-barrel domain - - - 0.0000000000002365 78.0
SYD3_k127_9475391_0 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 544.0
SYD3_k127_9475391_1 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.00000000000000000000000000000000000000000000005606 177.0
SYD3_k127_9475391_2 - - - - 0.00000000000000000000000000000000000000004626 165.0
SYD3_k127_9475391_3 DinB family - - - 0.000000000000000000000000000000000000001148 157.0
SYD3_k127_9475391_4 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000000000000002067 144.0
SYD3_k127_9475391_5 WYL domain - - - 0.0000000000000000000000000000000003983 142.0
SYD3_k127_950048_0 PFAM glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000000000002109 260.0
SYD3_k127_950048_1 Protein of unknown function (DUF2911) - - - 0.000000000000000000000000000000000000000000000000000000000000009557 225.0
SYD3_k127_950048_2 Bacterial membrane protein YfhO - - - 0.000000000000000000000000000008646 123.0
SYD3_k127_951963_0 Histidine kinase - - - 0.000000000000000000002673 110.0
SYD3_k127_9530718_0 Protein of unknown function (DUF420) - - - 0.000000000000000000000000000000000000000000001437 170.0
SYD3_k127_9530718_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000004101 169.0
SYD3_k127_9530718_2 Outer membrane protein beta-barrel domain - - - 0.000000000000000000001404 104.0
SYD3_k127_9530718_3 - - - - 0.000000000000000000003261 97.0
SYD3_k127_9530718_4 small membrane protein - - - 0.000006361 48.0
SYD3_k127_957616_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.000000000000000000000000000000000000000000007075 166.0
SYD3_k127_957616_1 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000005942 170.0
SYD3_k127_957616_2 Domain of unknown function DUF11 - - - 0.000000000000000002755 100.0
SYD3_k127_957616_3 - - - - 0.0000532 49.0
SYD3_k127_9596568_0 DNA polymerase X family - - - 5.505e-200 638.0
SYD3_k127_9596568_1 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000006856 208.0
SYD3_k127_9596568_2 Phosphoribosyl transferase domain K07100 - - 0.0000000000000000000000000000000000000000000000000000001359 199.0
SYD3_k127_9596568_3 - - - - 0.00000000002985 66.0
SYD3_k127_9606808_0 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003169 361.0
SYD3_k127_9606808_1 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000049 246.0
SYD3_k127_9606808_2 PFAM Lipid polyisoprenoid-binding, YceI-like - - - 0.00000000000000000000000000000000000000000000000000003834 194.0
SYD3_k127_9606808_3 Cytochrome c - - - 0.0000000000000000000000000000000125 130.0
SYD3_k127_9606808_4 Psort location Cytoplasmic, score K01262 - 3.4.11.9 0.00000000000000000000000000001255 121.0
SYD3_k127_9606808_5 metallopeptidase activity K07282 - - 0.00000000000000000000001638 118.0
SYD3_k127_9606808_6 tRNA_anti-like - - - 0.0000000000000000000003485 100.0
SYD3_k127_9606808_7 Halocyanin domain protein - - - 0.0000159 59.0
SYD3_k127_9606808_8 metallopeptidase activity - - - 0.00004789 57.0
SYD3_k127_9606808_9 Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I K02638 - - 0.0009933 53.0
SYD3_k127_9625523_0 transcriptional regulator, winged helix family - - - 0.000000000000000000000000000000000000000000000000000000000000001285 228.0
SYD3_k127_9625523_1 Glyoxalase K04750 - - 0.00000000000000000000000000000000000000000000000000000000000251 211.0
SYD3_k127_9625523_2 - - - - 0.0000000000003898 74.0
SYD3_k127_9625523_3 Sortilin, neurotensin receptor 3, - - - 0.0000000000784 73.0
SYD3_k127_9641010_0 COG0188 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) A subunit K02621 - - 0.0 1128.0
SYD3_k127_9641010_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004283 459.0
SYD3_k127_9641010_2 Protein of unknown function, DUF255 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001058 273.0
SYD3_k127_9641010_3 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000008573 257.0
SYD3_k127_9641010_4 outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000000005512 235.0
SYD3_k127_9641010_5 Domain of unknown function (DUF5103) - - - 0.00000000000000000000004909 104.0
SYD3_k127_9641010_6 - - - - 0.00000000000000000001934 95.0
SYD3_k127_9641010_7 PFAM Anti-sigma-K factor RskA - - - 0.000005127 57.0
SYD3_k127_9666105_0 Peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 361.0
SYD3_k127_9666105_1 IMG reference gene K01114,K15125 - 3.1.4.3 0.00000000000000000000000001531 128.0
SYD3_k127_9666105_2 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000106 59.0
SYD3_k127_9685468_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 9.705e-245 777.0
SYD3_k127_9685468_1 apolipoprotein N-acyltransferase K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 434.0
SYD3_k127_9685468_2 COG1520 FOG WD40-like repeat - - - 0.00009786 55.0
SYD3_k127_9687409_0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 0.0 1077.0
SYD3_k127_9687409_1 Protein of unknown function (DUF3667) - - - 0.0000000000000000000008934 104.0
SYD3_k127_9708718_0 gliding motility-associated lipoprotein GldJ - - - 3.569e-214 676.0
SYD3_k127_9708718_1 Mur ligase family, catalytic domain K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006604 321.0
SYD3_k127_9708718_2 Type IX secretion system membrane protein PorP/SprF - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004941 253.0
SYD3_k127_9708718_3 Peptidase family C25 - - - 0.0000000000000000000000000000000006193 143.0
SYD3_k127_9780101_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 538.0
SYD3_k127_9780101_1 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000009028 124.0
SYD3_k127_9838225_0 PFAM Dynamin family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005048 565.0
SYD3_k127_9838225_1 Serine protease, subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 556.0
SYD3_k127_9838225_10 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000005725 233.0
SYD3_k127_9838225_11 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000009633 188.0
SYD3_k127_9838225_12 N-acetylglucosamine kinase - - - 0.00000000000000000000000000000000000000000002217 173.0
SYD3_k127_9838225_13 PFAM FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03767,K03772 - 5.2.1.8 0.0000000000000000000000000000000000000005306 160.0
SYD3_k127_9838225_14 Domain of unknown function (DUF4252) - - - 0.000000000000000000000000000000000001777 147.0
SYD3_k127_9838225_15 Pfam Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000002149 138.0
SYD3_k127_9838225_16 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000003194 123.0
SYD3_k127_9838225_17 WbqC-like protein family - - - 0.00000000000000000000000004405 116.0
SYD3_k127_9838225_18 CutA1 divalent ion tolerance protein K03926 - - 0.00000000000000000007366 93.0
SYD3_k127_9838225_19 polysaccharide biosynthetic process - - - 0.00000000000001805 86.0
SYD3_k127_9838225_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005817 510.0
SYD3_k127_9838225_20 polysaccharide biosynthetic process K00655,K00721 - 2.3.1.51,2.4.1.83 0.00000006821 57.0
SYD3_k127_9838225_21 - - - - 0.00000274 55.0
SYD3_k127_9838225_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 506.0
SYD3_k127_9838225_4 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 450.0
SYD3_k127_9838225_5 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003695 416.0
SYD3_k127_9838225_6 phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 354.0
SYD3_k127_9838225_7 Ferredoxin--NADP reductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 341.0
SYD3_k127_9838225_8 Predicted membrane protein (DUF2207) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006221 299.0
SYD3_k127_9838225_9 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005682 276.0
SYD3_k127_9841753_0 Sortilin, neurotensin receptor 3, - - - 0.0 1362.0
SYD3_k127_9841753_1 Oxidoreductase K00184 - - 0.0 1146.0
SYD3_k127_9841753_10 PFAM Cytochrome c, class I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 578.0
SYD3_k127_9841753_11 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 574.0
SYD3_k127_9841753_12 Quinol cytochrome c oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003855 509.0
SYD3_k127_9841753_13 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 GO:0003674,GO:0003824,GO:0004799,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0032259,GO:0034641,GO:0034654,GO:0042083,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046385,GO:0046483,GO:0055086,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005055 462.0
SYD3_k127_9841753_14 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 439.0
SYD3_k127_9841753_15 oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006595 430.0
SYD3_k127_9841753_16 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000487 425.0
SYD3_k127_9841753_17 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 386.0
SYD3_k127_9841753_18 PFAM Peptidase M16 inactive domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005794 362.0
SYD3_k127_9841753_19 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008419 325.0
SYD3_k127_9841753_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1035.0
SYD3_k127_9841753_20 CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006969 319.0
SYD3_k127_9841753_21 RNA-binding PUA-like domain of methyltransferase RsmF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005121 307.0
SYD3_k127_9841753_22 YceG-like family K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 295.0
SYD3_k127_9841753_23 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001689 270.0
SYD3_k127_9841753_24 cytochrome C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003994 269.0
SYD3_k127_9841753_25 Asparaginase, N-terminal K01424 - 3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000007553 256.0
SYD3_k127_9841753_26 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000141 263.0
SYD3_k127_9841753_27 Quinol cytochrome c oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001095 251.0
SYD3_k127_9841753_28 Thymidylate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008307 248.0
SYD3_k127_9841753_29 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000008699 242.0
SYD3_k127_9841753_3 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.0 1019.0
SYD3_k127_9841753_30 cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000006334 213.0
SYD3_k127_9841753_31 - - - - 0.000000000000000000000000000000000000000000000000000000000007666 220.0
SYD3_k127_9841753_32 RNA methyltransferase, RsmD K08316 - 2.1.1.171 0.0000000000000000000000000000000000000000000000001162 183.0
SYD3_k127_9841753_33 Universal stress protein family - - - 0.000000000000000000000000000000000000000000004496 167.0
SYD3_k127_9841753_34 TIGRFAM 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.0000000000000000000000000000000000004265 147.0
SYD3_k127_9841753_36 Transglycosylase associated protein - - - 0.00000000000000000000000002031 110.0
SYD3_k127_9841753_37 - - - - 0.000000000000000000001237 102.0
SYD3_k127_9841753_38 - - - - 0.000000000000000000004889 97.0
SYD3_k127_9841753_39 - - - - 0.00000000002419 71.0
SYD3_k127_9841753_4 Heat shock 70 kDa protein K04043 - - 9.698e-320 988.0
SYD3_k127_9841753_40 Methyltransferase type 11 - - - 0.0000004508 61.0
SYD3_k127_9841753_5 Belongs to the UbiD family K03182 - 4.1.1.98 7.907e-264 824.0
SYD3_k127_9841753_6 PFAM Polysulphide reductase, NrfD K00185 - - 6.683e-258 800.0
SYD3_k127_9841753_7 Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA K01886 - 6.1.1.18 5.669e-242 758.0
SYD3_k127_9841753_8 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 5.721e-227 718.0
SYD3_k127_9841753_9 Peptidase M16 inactive domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 599.0
SYD3_k127_9872771_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 2.283e-279 880.0
SYD3_k127_9872771_1 peptidase M42 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005191 520.0
SYD3_k127_9872771_11 Belongs to the Nudix hydrolase family - - - 0.0001764 46.0
SYD3_k127_9872771_2 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006359 315.0
SYD3_k127_9872771_3 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005881 258.0
SYD3_k127_9872771_4 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762,K13421 - 2.4.2.10,4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000002164 244.0
SYD3_k127_9872771_5 regulator of chromosome condensation, RCC1 - - - 0.0000000000000000000000000000000000000000000002818 194.0
SYD3_k127_9872771_6 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000851 169.0
SYD3_k127_9872771_7 metallopeptidase activity K13735 - - 0.000000000000000000000000000002853 141.0
SYD3_k127_9872771_8 Kazal type serine protease inhibitors - - - 0.000000000000000001951 87.0
SYD3_k127_9872771_9 PFAM UbiA prenyltransferase family - - - 0.0000000000000001208 90.0
SYD3_k127_9887531_0 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009397 490.0
SYD3_k127_9887531_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 408.0
SYD3_k127_9887531_2 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009059 281.0
SYD3_k127_9887531_3 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000006358 220.0
SYD3_k127_9887531_4 mevalonate kinase K00869 - 2.7.1.36 0.0000000000000000000000000000000000000000000673 171.0
SYD3_k127_9887531_5 Modulates RecA activity K03565 - - 0.000000000000000004255 90.0
SYD3_k127_9887531_6 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P) K07094 - - 0.00005724 46.0
SYD3_k127_9901584_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 1.225e-292 906.0
SYD3_k127_9901584_1 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006063 450.0
SYD3_k127_9901584_2 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000008813 169.0