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Overview

ID MAG03803
Name SYD3_bin.41
Sample SMP0096
Taxonomy
Kingdom Bacteria
Phylum Myxococcota
Class Myxococcia
Order Myxococcales
Family Anaeromyxobacteraceae
Genus Anaeromyxobacter
Species
Assembly information
Completeness (%) 84.42
Contamination (%) 2.03
GC content (%) 76.0
N50 (bp) 9,701
Genome size (bp) 4,543,469

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3952

Gene name Description KEGG GOs EC E-value Score Sequence
SYD3_k127_10006777_0 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 454.0
SYD3_k127_10006777_1 nUDIX hydrolase K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008166 355.0
SYD3_k127_10006777_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004699 297.0
SYD3_k127_10006777_3 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000006301 224.0
SYD3_k127_10006777_4 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) K03594 - 1.16.3.1 0.00000000000000000000000000000000009593 140.0
SYD3_k127_1002476_0 7 transmembrane helices usually fused to an inactive transglutaminase - - - 1.474e-269 837.0
SYD3_k127_1002476_1 Tetratricopeptide repeat - - - 1.66e-209 685.0
SYD3_k127_1002476_2 MacB-like periplasmic core domain K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008933 546.0
SYD3_k127_1002476_3 Sugar-transfer associated ATP-grasp - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009431 477.0
SYD3_k127_1002476_4 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008989 324.0
SYD3_k127_1002476_6 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008248 295.0
SYD3_k127_1002476_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004118 269.0
SYD3_k127_1002476_8 PFAM Class I peptide chain release factor K15034 - - 0.0000000000000000000000000000000000001328 154.0
SYD3_k127_1002476_9 cellulase activity - - - 0.0000008574 60.0
SYD3_k127_10045260_0 Periplasmic binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005462 353.0
SYD3_k127_10045260_1 SCO1/SenC K07152 - - 0.00000000000000000000000000000000000000000000000000007931 204.0
SYD3_k127_10045260_2 SCO1 SenC K07152 - - 0.0000000000000000000000000000000000000000000001591 182.0
SYD3_k127_10045260_3 Cytochrome D1 heme domain - - - 0.0000000000000000000000993 101.0
SYD3_k127_10045260_4 Protein tyrosine kinase - - - 0.00000109 53.0
SYD3_k127_10049449_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 1.555e-242 754.0
SYD3_k127_10049449_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 516.0
SYD3_k127_10049449_2 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004776 333.0
SYD3_k127_10049449_3 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006602 306.0
SYD3_k127_10049449_4 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 303.0
SYD3_k127_10049449_5 PFAM amino acid-binding ACT domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004904 248.0
SYD3_k127_10049449_6 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000994 265.0
SYD3_k127_10049449_7 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000002132 255.0
SYD3_k127_10049449_8 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000003381 250.0
SYD3_k127_10049449_9 endonuclease activity K07451 - - 0.0000000000000000000000006156 107.0
SYD3_k127_10050566_1 acid phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 479.0
SYD3_k127_10050566_3 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 282.0
SYD3_k127_10055715_0 AMP-binding enzyme K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003606 370.0
SYD3_k127_10055715_1 GHKL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000765 301.0
SYD3_k127_10055715_2 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000001006 273.0
SYD3_k127_10055715_3 DAHP synthetase I family K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000001028 249.0
SYD3_k127_10055715_4 SMART Elongator protein 3 MiaB NifB K04034 - 1.21.98.3 0.00000000000000000000000000000000000000000000001052 194.0
SYD3_k127_10055715_5 Histidine kinase - - - 0.00000000000000000000000000000000000003139 162.0
SYD3_k127_10055715_6 carboxylic ester hydrolase activity - - - 0.000000000000000000001011 113.0
SYD3_k127_10066365_0 Cys Met metabolism K01739,K01758,K01760,K01761 - 2.5.1.48,4.4.1.1,4.4.1.11,4.4.1.8 1.048e-238 743.0
SYD3_k127_10066365_1 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 467.0
SYD3_k127_10066365_2 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004913 259.0
SYD3_k127_10097018_0 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 498.0
SYD3_k127_10097018_1 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily K03976 - - 0.00000000000000000000000000000000000005435 143.0
SYD3_k127_10097018_2 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.000000000000000000000000000000000002938 138.0
SYD3_k127_10117055_0 Belongs to the glycosyl hydrolase 57 family - - - 0.0 1059.0
SYD3_k127_10117055_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0000271,GO:0003674,GO:0003824,GO:0004373,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 3.539e-243 757.0
SYD3_k127_10117055_2 TIGRFAM galactose-1-phosphate uridylyltransferase K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006501 606.0
SYD3_k127_10117055_3 of the major facilitator superfamily K08151 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 565.0
SYD3_k127_10117055_4 Forkhead associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005024 334.0
SYD3_k127_10117055_7 membrane - - - 0.0000000000000000003478 89.0
SYD3_k127_10117055_8 Zincin-like metallopeptidase K00930 - 2.7.2.8 0.0000000007886 59.0
SYD3_k127_10177477_0 ribonuclease BN K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 482.0
SYD3_k127_10177477_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009767 306.0
SYD3_k127_10177477_2 N-terminal half of MaoC dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003305 263.0
SYD3_k127_10177477_3 heat shock protein 70 K04043 - - 0.00000000000001271 74.0
SYD3_k127_10177477_4 MaoC like domain - - - 0.0000000002762 61.0
SYD3_k127_10303629_0 dioxygenase K00457,K16421 - 1.13.11.27,1.13.11.46 1.514e-221 704.0
SYD3_k127_10303629_1 homogentisate 12-dioxygenase K00451 - 1.13.11.5 3.489e-209 654.0
SYD3_k127_10303629_10 cellulase activity - - - 0.000000107 65.0
SYD3_k127_10303629_2 Amidase K01426 - 3.5.1.4 1.877e-208 666.0
SYD3_k127_10303629_3 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 1.651e-195 616.0
SYD3_k127_10303629_4 Peptidogalycan biosysnthesis/recognition K09919 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 611.0
SYD3_k127_10303629_5 Fumarylacetoacetate (FAA) hydrolase family K16171 - 3.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 538.0
SYD3_k127_10303629_6 maleylacetoacetate isomerase K01800,K01801 - 5.2.1.2,5.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 331.0
SYD3_k127_10303629_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000005733 243.0
SYD3_k127_10303629_9 SNARE associated Golgi protein - - - 0.00000005717 66.0
SYD3_k127_10313576_0 peptidylprolyl isomerase, FKBP-type K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000002572 209.0
SYD3_k127_10313576_3 polysaccharide deacetylase - - - 0.0000000000001922 81.0
SYD3_k127_10320416_0 Insulinase (Peptidase family M16) K07263 - - 2.402e-224 718.0
SYD3_k127_10320416_1 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 580.0
SYD3_k127_10320416_2 Belongs to the helicase family. UvrD subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 488.0
SYD3_k127_10320416_3 photoreceptor activity K11527 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 383.0
SYD3_k127_10320416_4 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000001143 185.0
SYD3_k127_10320416_5 transferase activity, transferring acyl groups K15520 - 2.3.1.189 0.00000000000000000000000000000000007997 144.0
SYD3_k127_10320416_6 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.00000000000000000000000002376 108.0
SYD3_k127_1033455_0 pyruvate phosphate dikinase K01006 - 2.7.9.1 0.0 1327.0
SYD3_k127_1033455_1 Cell division protein FtsI penicillin-binding protein 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 460.0
SYD3_k127_1033455_2 Domain of unknown function (DUF3482) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 290.0
SYD3_k127_10373894_0 Uncharacterised conserved protein (DUF2156) K07027,K14205 - 2.3.2.3 0.0 1115.0
SYD3_k127_10373894_1 Phospholipase D. Active site motifs. K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 609.0
SYD3_k127_10373894_2 response regulator K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004402 414.0
SYD3_k127_10373894_3 virulence factor family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001481 288.0
SYD3_k127_10373894_4 LysM domain - - - 0.0000000000000000000000000000000000000000000001047 176.0
SYD3_k127_10373894_5 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000112 178.0
SYD3_k127_10375392_0 Forkhead associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 492.0
SYD3_k127_10375392_1 TPR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 473.0
SYD3_k127_10375392_2 Phosphotransferase enzyme family K02204 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004609 419.0
SYD3_k127_10375392_3 phosphoserine phosphatase homoserine phosphotransferase bifunctional protein K02203 - 2.7.1.39,3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 338.0
SYD3_k127_10375392_4 - - - - 0.0000000000000000000000000000000000000000000000000000000001386 211.0
SYD3_k127_10455011_0 PFAM AMP-dependent synthetase and ligase - - - 0.0 2156.0
SYD3_k127_10455011_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902,K15230,K15233 - 2.3.3.8,6.2.1.5 0.0 1269.0
SYD3_k127_10455011_10 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003306 338.0
SYD3_k127_10455011_12 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005811 305.0
SYD3_k127_10455011_13 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 327.0
SYD3_k127_10455011_14 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001855 287.0
SYD3_k127_10455011_15 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006885 277.0
SYD3_k127_10455011_16 STAS domain K03321 - - 0.000000000000000000000000000000000000000000000000000000000000009336 229.0
SYD3_k127_10455011_17 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000001756 231.0
SYD3_k127_10455011_18 PFAM ABC transporter related K02003 - - 0.0000000000000000000000000000000000000000000000000000000523 224.0
SYD3_k127_10455011_19 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K01086,K03841 - 3.1.3.11,3.1.3.37 0.00000000000000000000000000000000000000000000001001 192.0
SYD3_k127_10455011_2 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 3.427e-212 679.0
SYD3_k127_10455011_20 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000001096 157.0
SYD3_k127_10455011_21 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.00000000000000000000000000638 118.0
SYD3_k127_10455011_22 sulfur carrier activity - GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0019725,GO:0033554,GO:0042592,GO:0048878,GO:0050896,GO:0051716,GO:0055082,GO:0065007,GO:0065008 - 0.000000000000000000000000008014 113.0
SYD3_k127_10455011_23 - - - - 0.000000000000000000003713 98.0
SYD3_k127_10455011_24 - - - - 0.00000000000005159 86.0
SYD3_k127_10455011_25 PFAM ribulose bisphosphate carboxylase small chain K01602 - 4.1.1.39 0.0000000000001436 76.0
SYD3_k127_10455011_26 - - - - 0.00000007649 60.0
SYD3_k127_10455011_27 - - - - 0.000000727 57.0
SYD3_k127_10455011_3 succinate-CoA ligase activity K15231,K15232 - 2.3.3.8,6.2.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 583.0
SYD3_k127_10455011_4 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006096 595.0
SYD3_k127_10455011_5 Belongs to the alpha-IPM synthase homocitrate synthase family K01655 - 2.3.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003821 623.0
SYD3_k127_10455011_6 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 569.0
SYD3_k127_10455011_7 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 481.0
SYD3_k127_10455011_8 Phosphoribulokinase / Uridine kinase family K00855 - 2.7.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000079 454.0
SYD3_k127_10455011_9 response to heat K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004064 437.0
SYD3_k127_10461961_0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006882 344.0
SYD3_k127_10461961_2 PFAM NADH Ubiquinone plastoquinone (complex I) K12137 - - 0.000000000000000000000001121 115.0
SYD3_k127_10461961_3 two component, sigma54 specific, transcriptional regulator, Fis family K10943 - - 0.0000000000000007761 78.0
SYD3_k127_10475930_0 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.0 1329.0
SYD3_k127_10475930_1 PFAM MscS Mechanosensitive ion channel K16052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003082 515.0
SYD3_k127_10475930_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006699 393.0
SYD3_k127_10475930_3 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 398.0
SYD3_k127_10480516_0 Belongs to the argininosuccinate synthase family. Type K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 510.0
SYD3_k127_10480516_1 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 404.0
SYD3_k127_10480516_2 Copper binding periplasmic protein CusF - - - 0.0000000000000000000000000008277 117.0
SYD3_k127_10480516_3 transcription factor binding K03406,K03776 - - 0.000000000000000000000001227 122.0
SYD3_k127_10480516_4 Putative zinc- or iron-chelating domain - - - 0.00000000000000001037 85.0
SYD3_k127_10491_0 Formiminotransferase domain, N-terminal subdomain K00603,K13990 - 2.1.2.5,4.3.1.4 0.000000000000000000000000000000000000000000000000000000000000000000916 236.0
SYD3_k127_10491_1 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.000000000000003605 83.0
SYD3_k127_10518187_0 AsmA family K07289 - - 0.0 1156.0
SYD3_k127_10518187_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 GO:0003674,GO:0003824,GO:0004033,GO:0008106,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0055114 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 526.0
SYD3_k127_10518187_2 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003553 269.0
SYD3_k127_10518187_3 endonuclease activity K07451 - - 0.00000000000000000000000000000000000000001137 154.0
SYD3_k127_10518187_4 Acid phosphatase homologues - - - 0.00000000000000000000000000000001035 138.0
SYD3_k127_10518187_5 Response regulator, receiver - - - 0.00000000000000000000000000001403 133.0
SYD3_k127_10524727_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 5.326e-213 674.0
SYD3_k127_10524727_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 369.0
SYD3_k127_10524727_2 Roadblock/LC7 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006625 302.0
SYD3_k127_10524727_3 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000000000000000000000003951 166.0
SYD3_k127_10543011_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 5.099e-293 910.0
SYD3_k127_10543011_1 TRAP transporter T-component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003351 444.0
SYD3_k127_10543011_2 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006041 344.0
SYD3_k127_10543011_3 Methyltransferase domain - - - 0.0004566 43.0
SYD3_k127_10614023_0 Peptidase family M50 K11749 - - 2.791e-265 827.0
SYD3_k127_10614023_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 6.319e-196 619.0
SYD3_k127_10614023_10 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000000000000000000000000000003964 155.0
SYD3_k127_10614023_11 metal cluster binding - - - 0.00000000002875 71.0
SYD3_k127_10614023_12 Outer membrane protein beta-barrel domain K07275 - - 0.000003869 56.0
SYD3_k127_10614023_2 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009965 449.0
SYD3_k127_10614023_3 Domain of unknown function (DUF1731) K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006402 433.0
SYD3_k127_10614023_4 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 411.0
SYD3_k127_10614023_5 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006199 391.0
SYD3_k127_10614023_6 DNA-dependent DNA replication K02315,K04076 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 369.0
SYD3_k127_10614023_7 4Fe-4S dicluster domain K18930 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 334.0
SYD3_k127_10614023_9 Glycoprotease family K01409,K14742 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004108 314.0
SYD3_k127_1063837_0 Heat shock 70 kDa protein K04043 - - 0.0 1067.0
SYD3_k127_1063837_1 ABC-type branched-chain amino acid transport K07121 - - 3.572e-292 910.0
SYD3_k127_1063837_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005115 459.0
SYD3_k127_1064690_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 1.947e-282 878.0
SYD3_k127_1064690_1 AMP-binding enzyme C-terminal domain K18661 - - 3.111e-222 700.0
SYD3_k127_1064690_2 - K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 637.0
SYD3_k127_1064690_3 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 404.0
SYD3_k127_1064690_4 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002673 317.0
SYD3_k127_1064690_7 Aminotransferase - - - 0.0006339 46.0
SYD3_k127_10661_0 Malate synthase K01638 - 2.3.3.9 3.688e-294 908.0
SYD3_k127_10680364_0 P2 response regulator binding domain K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 601.0
SYD3_k127_10680364_1 Belongs to the LarC family K09121 - 4.99.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 573.0
SYD3_k127_10680364_2 AIR carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000952 426.0
SYD3_k127_10680364_3 chemotaxis K03410 GO:0006935,GO:0008150,GO:0009605,GO:0040011,GO:0042221,GO:0042330,GO:0050896,GO:0050918 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006354 309.0
SYD3_k127_10680364_4 Response regulator receiver domain K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000000006357 236.0
SYD3_k127_10680364_5 chemotaxis K02659,K03408 - - 0.000000000000000000000000000000008185 129.0
SYD3_k127_106814_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 6.704e-297 923.0
SYD3_k127_106814_1 Protein of unknown function (DUF763) K09003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000659 603.0
SYD3_k127_106814_2 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 511.0
SYD3_k127_106814_3 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007403 328.0
SYD3_k127_10693176_0 DNA polymerase K02337,K14162 - 2.7.7.7 1.105e-239 748.0
SYD3_k127_10693176_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009608 585.0
SYD3_k127_10693176_2 acetyltransferase - - - 0.000000000000000000000000000000000009509 141.0
SYD3_k127_10727869_0 RNA polymerase, sigma subunit, ECF family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006021 561.0
SYD3_k127_10727869_1 Diacylglycerol kinase catalytic domain (presumed) - - - 0.0000000000000000000000000000000000000000000000000000000000000348 238.0
SYD3_k127_10727869_2 cobalamin binding K03496,K22491 - - 0.00000000000000000000000000000000000000000000000001012 194.0
SYD3_k127_10727869_3 Pfam Polyketide cyclase dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000001418 179.0
SYD3_k127_10727869_4 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000009925 161.0
SYD3_k127_10727869_6 - - - - 0.0000000000001004 85.0
SYD3_k127_10734508_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 1.142e-247 771.0
SYD3_k127_10734508_1 inositol 2-dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 398.0
SYD3_k127_10734508_2 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 307.0
SYD3_k127_10748345_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 557.0
SYD3_k127_10748345_1 -O-antigen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005966 548.0
SYD3_k127_10748345_2 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004314 549.0
SYD3_k127_10748345_3 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 353.0
SYD3_k127_10748345_4 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000001095 225.0
SYD3_k127_10748345_5 Domain of unknown function (DUF4262) - - - 0.0000000000000000000000000000000000000002789 170.0
SYD3_k127_10753427_0 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004274 377.0
SYD3_k127_10753427_1 NMT1/THI5 like K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003958 271.0
SYD3_k127_10753427_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.00000000000000000000000000000000000000000252 160.0
SYD3_k127_10763505_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006837 344.0
SYD3_k127_10763505_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 - 5.1.1.20 0.00000000000000000000000000000000000000002141 153.0
SYD3_k127_1078340_0 Acyl-CoA dehydrogenase, C-terminal domain K00249,K11731 - 1.3.8.7 1.479e-209 655.0
SYD3_k127_1078340_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009849 496.0
SYD3_k127_1078340_2 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006091 438.0
SYD3_k127_1078340_3 spore germination K15270 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 421.0
SYD3_k127_1078340_4 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004891 302.0
SYD3_k127_1078340_5 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005013 241.0
SYD3_k127_1078340_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000002469 241.0
SYD3_k127_1078340_7 Chalcone isomerase-like - - - 0.000000000000000000000000000000000000000000000000000000000000006102 249.0
SYD3_k127_1078340_8 - - - - 0.0000000000000000000000000000000000000000000000000000004351 195.0
SYD3_k127_1078340_9 CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000000000000000000001135 163.0
SYD3_k127_10800171_0 Chromate transporter K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000001929 239.0
SYD3_k127_10800171_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000001742 244.0
SYD3_k127_10828141_0 - - - - 5.978e-320 986.0
SYD3_k127_10828141_1 Peptidase family S41 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004961 617.0
SYD3_k127_10828141_2 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 510.0
SYD3_k127_10828141_3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 417.0
SYD3_k127_10828141_4 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 392.0
SYD3_k127_10828141_5 endonuclease activity K07451 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 354.0
SYD3_k127_10828141_6 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 375.0
SYD3_k127_10828141_7 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 353.0
SYD3_k127_10828141_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.0000000000000000000000000000000000000000000000000000000000000000002269 241.0
SYD3_k127_10828141_9 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus K04760 - - 0.000000000000000000000000000000000000000000000000000000000000000008033 228.0
SYD3_k127_10834135_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1710.0
SYD3_k127_10834135_1 two component, sigma54 specific, transcriptional regulator, Fis family - - - 5.4e-231 722.0
SYD3_k127_10834135_10 Membrane - - - 0.00000000000000000000000000000000000000000000002238 175.0
SYD3_k127_10834135_11 Histidine kinase - - - 0.000000000002695 71.0
SYD3_k127_10834135_2 PFAM major facilitator superfamily MFS_1 K08167 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 558.0
SYD3_k127_10834135_3 Biotin-lipoyl like K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 529.0
SYD3_k127_10834135_4 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003923 509.0
SYD3_k127_10834135_5 dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006268 492.0
SYD3_k127_10834135_6 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005447 301.0
SYD3_k127_10834135_7 Transcriptional Regulator, AraC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004142 293.0
SYD3_k127_10834135_9 Chromate transporter K07240 - - 0.000000000000000000000000000000000000000000000000000000005497 211.0
SYD3_k127_10849164_0 uridine kinase K00876 - 2.7.1.48 0.0 1045.0
SYD3_k127_10849164_1 Histidine kinase - - - 3.416e-243 794.0
SYD3_k127_10849164_2 tRNA synthetases class II (D, K and N) K04568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 499.0
SYD3_k127_10849164_3 Alpha/beta hydrolase family K02170 - 3.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008667 288.0
SYD3_k127_10849164_4 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0017144,GO:0018130,GO:0019752,GO:0032259,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.197 0.00000000000000000000003849 111.0
SYD3_k127_10865478_0 Voltage gated chloride channel K03281 - - 5.066e-273 849.0
SYD3_k127_10865478_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009719 544.0
SYD3_k127_10865478_2 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000487 546.0
SYD3_k127_10865478_3 Major Facilitator Superfamily K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003267 472.0
SYD3_k127_10865478_4 Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008657 461.0
SYD3_k127_10865478_5 endonuclease activity K07451 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 308.0
SYD3_k127_10865478_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001102 279.0
SYD3_k127_1086958_0 endonuclease activity K07451 - - 0.00000000000000000000000000000000000000002038 166.0
SYD3_k127_1102172_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003004 481.0
SYD3_k127_1102172_1 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000586 357.0
SYD3_k127_1102172_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000006194 161.0
SYD3_k127_1110169_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.664e-256 804.0
SYD3_k127_1110169_1 Bacterial regulatory protein, Fis family K07713 - - 3.178e-246 767.0
SYD3_k127_1110169_10 Predicted membrane protein (DUF2157) - - - 0.000000000000000000000000000000000000000000004986 179.0
SYD3_k127_1110169_11 serine threonine protein kinase K08884 - 2.7.11.1 0.0000000000000000000000000000002788 143.0
SYD3_k127_1110169_12 Belongs to the ompA family K03640 - - 0.0000000000000000000000000005109 121.0
SYD3_k127_1110169_14 ECF sigma factor family protein - - - 0.0000095 58.0
SYD3_k127_1110169_2 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 1.95e-228 715.0
SYD3_k127_1110169_3 Metallo-beta-lactamase superfamily - - - 3.304e-214 680.0
SYD3_k127_1110169_4 PFAM Xanthine uracil vitamin C permease K06901 - - 1.579e-207 668.0
SYD3_k127_1110169_5 PFAM Xanthine uracil vitamin C permease K02824 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003074 627.0
SYD3_k127_1110169_6 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002633 404.0
SYD3_k127_1110169_7 Nucleoside-specific channel-forming protein, Tsx - - - 0.00000000000000000000000000000000000000000000000000000000000000000002406 242.0
SYD3_k127_1110169_9 - - - - 0.0000000000000000000000000000000000000000000000002872 203.0
SYD3_k127_1132223_0 DNA helicase K03654 - 3.6.4.12 3.013e-255 799.0
SYD3_k127_1132223_1 FeS assembly protein SufB K09014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005686 578.0
SYD3_k127_1132223_10 transcriptional regulator, Rrf2 family - - - 0.00000000000000000000000000000000000000000000000000000000002294 210.0
SYD3_k127_1132223_2 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 516.0
SYD3_k127_1132223_3 PFAM ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 490.0
SYD3_k127_1132223_4 PFAM ABC transporter K01990,K01992,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 449.0
SYD3_k127_1132223_5 Domain present in PSD-95, Dlg, and ZO-1/2. K08070 - 1.3.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005257 388.0
SYD3_k127_1132223_6 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005765 369.0
SYD3_k127_1132223_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 344.0
SYD3_k127_1132223_8 YaeQ - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001733 258.0
SYD3_k127_1132223_9 PFAM secretion protein HlyD family protein K01993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001552 247.0
SYD3_k127_1139328_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008231 397.0
SYD3_k127_1139328_1 Belongs to the arginase family K01480 - 3.5.3.11 0.0000000000000000000000000004014 119.0
SYD3_k127_1139328_2 PIN domain - - - 0.000000000000000004468 98.0
SYD3_k127_11598_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007798 315.0
SYD3_k127_11598_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00000000000000000000000000000000000000000000000000615 193.0
SYD3_k127_1177650_0 lipopolysaccharide transport K22110 - - 0.0 1298.0
SYD3_k127_1177650_1 Malate synthase K01638 - 2.3.3.9 0.0 1249.0
SYD3_k127_1177650_10 Domain of unknown function (DUF4442) - - - 0.00000000000000000000000000000000000000001015 162.0
SYD3_k127_1177650_11 Protein of unknown function, DUF417 - - - 0.000000000000000000000000000000000000001386 169.0
SYD3_k127_1177650_12 - - - - 0.000000000000000000000000000000000000003321 169.0
SYD3_k127_1177650_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain - - - 1.76e-221 708.0
SYD3_k127_1177650_3 Glycogen debranching enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 561.0
SYD3_k127_1177650_4 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 477.0
SYD3_k127_1177650_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009835 406.0
SYD3_k127_1177650_6 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006144 379.0
SYD3_k127_1177650_7 NADH dehydrogenase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004839 385.0
SYD3_k127_1177650_8 Methyl-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 324.0
SYD3_k127_1177650_9 water channel activity K02440,K06188 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003597 257.0
SYD3_k127_118253_0 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 0.0 1075.0
SYD3_k127_118253_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 6.896e-295 949.0
SYD3_k127_118253_10 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 447.0
SYD3_k127_118253_11 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009052 432.0
SYD3_k127_118253_12 RarD protein K05786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 410.0
SYD3_k127_118253_13 Surface antigen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 390.0
SYD3_k127_118253_14 PFAM oxidoreductase FAD NAD(P)-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005922 346.0
SYD3_k127_118253_15 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 321.0
SYD3_k127_118253_16 Lysin motif K06194 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004272 317.0
SYD3_k127_118253_17 Rubrerythrin - GO:0003674,GO:0005488,GO:0005506,GO:0043167,GO:0043169,GO:0046872,GO:0046914 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009518 277.0
SYD3_k127_118253_18 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001169 287.0
SYD3_k127_118253_19 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003194 289.0
SYD3_k127_118253_2 Cysteine-rich domain K00113 - 1.1.5.3 1.525e-271 838.0
SYD3_k127_118253_20 Protein of unknown function (DUF3501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000242 278.0
SYD3_k127_118253_21 Cys-tRNA(Pro) hydrolase activity K19055 - - 0.00000000000000000000000000000000000000000000000000000000000000000009222 235.0
SYD3_k127_118253_22 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000003552 233.0
SYD3_k127_118253_23 PFAM CBS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000002738 235.0
SYD3_k127_118253_24 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000000000000000000003133 238.0
SYD3_k127_118253_25 - - - - 0.000000000000000000000000000000000000000000000000000000000004742 212.0
SYD3_k127_118253_26 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000000000000000000000001372 194.0
SYD3_k127_118253_27 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.000000000000000000000000000000000000000000000000001066 184.0
SYD3_k127_118253_28 - - - - 0.000000000000000000000000000000000000000000000257 173.0
SYD3_k127_118253_29 Lrp/AsnC ligand binding domain - - - 0.0000000000000000000000000000000000104 145.0
SYD3_k127_118253_3 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 1.34e-219 698.0
SYD3_k127_118253_30 - - - - 0.000000000000000000000000000000213 139.0
SYD3_k127_118253_31 - - - - 0.00000000000000000000000005042 126.0
SYD3_k127_118253_32 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.00000000000000000002331 106.0
SYD3_k127_118253_34 4Fe-4S binding domain - - - 0.000009878 53.0
SYD3_k127_118253_4 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 8.999e-206 674.0
SYD3_k127_118253_5 4-alpha-glucanotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009534 612.0
SYD3_k127_118253_6 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 536.0
SYD3_k127_118253_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 482.0
SYD3_k127_118253_8 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005258 516.0
SYD3_k127_118253_9 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 439.0
SYD3_k127_1219212_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003945 582.0
SYD3_k127_1219212_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000772 583.0
SYD3_k127_1219212_2 PFAM Metallophosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006934 325.0
SYD3_k127_1219212_3 response regulator K07685 - - 0.000000000000000000000000000000000000000000000000000000000000000000004737 243.0
SYD3_k127_1247173_0 peptidyl-prolyl isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 438.0
SYD3_k127_1247173_1 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008872 374.0
SYD3_k127_1247173_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006207 322.0
SYD3_k127_1247173_3 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003987 289.0
SYD3_k127_1290532_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 1.838e-252 810.0
SYD3_k127_1290532_1 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007992 275.0
SYD3_k127_1344774_0 Threonine dehydratase K01754 - 4.3.1.19 2.891e-207 649.0
SYD3_k127_1344774_1 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 309.0
SYD3_k127_1344774_2 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003923 294.0
SYD3_k127_1344774_3 acetyltransferase - - - 0.000000000000000000000000001953 126.0
SYD3_k127_1350_0 Histidine kinase K07711,K19694 - 2.7.13.3 0.00000000000000000000000000000000000000000000001389 190.0
SYD3_k127_1350_1 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000001211 174.0
SYD3_k127_1350_2 Cysteine-rich secretory protein family - - - 0.00000000000000000000000000000000000000139 154.0
SYD3_k127_1350_4 glutamine synthetase K01915 - 6.3.1.2 0.000000000000000000000000000000286 130.0
SYD3_k127_1350_5 PFAM Rhodanese domain protein - - - 0.000000000000000001535 93.0
SYD3_k127_1356267_0 Belongs to the SAICAR synthetase family K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 605.0
SYD3_k127_1356267_1 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 603.0
SYD3_k127_1356267_10 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 307.0
SYD3_k127_1356267_11 HAD-hyrolase-like K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 289.0
SYD3_k127_1356267_12 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000003504 261.0
SYD3_k127_1356267_13 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000001944 243.0
SYD3_k127_1356267_14 AMMECR1 K09141 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006589 251.0
SYD3_k127_1356267_16 Response regulator, receiver - - - 0.0000000000000000000000000000000000000003116 158.0
SYD3_k127_1356267_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 582.0
SYD3_k127_1356267_3 Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004179 555.0
SYD3_k127_1356267_4 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 542.0
SYD3_k127_1356267_6 Peptidase family M50 K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 477.0
SYD3_k127_1356267_7 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 417.0
SYD3_k127_1356267_8 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008433 336.0
SYD3_k127_1356267_9 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03635,K21142 - 2.8.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 332.0
SYD3_k127_1357613_0 Histone deacetylase domain - - - 1.253e-289 909.0
SYD3_k127_1357613_1 Mur ligase family, catalytic domain K02558 - 6.3.2.45 2.223e-261 810.0
SYD3_k127_1357613_10 - K07275 - - 0.00000000000602 78.0
SYD3_k127_1357613_3 beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 524.0
SYD3_k127_1357613_4 LD-carboxypeptidase K01297 - 3.4.17.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 463.0
SYD3_k127_1357613_5 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000489 411.0
SYD3_k127_1357613_6 8 heme-binding sites - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 388.0
SYD3_k127_1357613_7 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000002096 229.0
SYD3_k127_1357613_8 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0000000000000000000000000000000000009226 143.0
SYD3_k127_1364016_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 5.453e-265 821.0
SYD3_k127_1364016_1 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007642 569.0
SYD3_k127_1364016_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00334,K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009794 441.0
SYD3_k127_1364016_4 Neutral/alkaline non-lysosomal ceramidase, N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 381.0
SYD3_k127_1364016_5 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 286.0
SYD3_k127_1364016_6 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000002803 213.0
SYD3_k127_1364016_7 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000000000000000000000000005228 182.0
SYD3_k127_1364016_9 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000000000000002266 156.0
SYD3_k127_1372551_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1066.0
SYD3_k127_1372551_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 7.712e-296 913.0
SYD3_k127_1372551_10 Fumarase C-terminus K01676 - 4.2.1.2 0.000000000000000000000002666 101.0
SYD3_k127_1372551_12 - - - - 0.00000000000008407 83.0
SYD3_k127_1372551_2 Beta-eliminating lyase K01667 - 4.1.99.1 7.018e-264 821.0
SYD3_k127_1372551_3 Peptidase family M48 - - - 1.148e-205 649.0
SYD3_k127_1372551_4 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 608.0
SYD3_k127_1372551_5 Acyl-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 339.0
SYD3_k127_1372551_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001137 255.0
SYD3_k127_1372551_7 STAS domain K03321 - - 0.000000000000000000000000000000000000000000003126 186.0
SYD3_k127_1380089_0 penicillin-binding protein K03587 - 3.4.16.4 1.66e-286 893.0
SYD3_k127_1380089_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 6.365e-264 822.0
SYD3_k127_1380089_10 Formate dehydrogenase N, transmembrane K00124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 478.0
SYD3_k127_1380089_11 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 480.0
SYD3_k127_1380089_12 Enoyl-(Acyl carrier protein) reductase K13775 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 460.0
SYD3_k127_1380089_13 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008568 339.0
SYD3_k127_1380089_14 formate dehydrogenase K00127 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008198 337.0
SYD3_k127_1380089_15 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003283 264.0
SYD3_k127_1380089_16 Necessary for formate dehydrogenase activity K02380 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002208 258.0
SYD3_k127_1380089_17 Formate dehydrogenase, alpha subunit K00123 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006464,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009326,GO:0009987,GO:0016043,GO:0016226,GO:0016491,GO:0016622,GO:0016903,GO:0018282,GO:0018289,GO:0018291,GO:0019538,GO:0022607,GO:0031163,GO:0032991,GO:0036211,GO:0042597,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0047111,GO:0051186,GO:0055114,GO:0071704,GO:0071840,GO:1901564,GO:1902494 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000001854 210.0
SYD3_k127_1380089_18 cell division K03586 GO:0000003,GO:0000910,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0019954,GO:0022402,GO:0022414,GO:0031224,GO:0031226,GO:0032153,GO:0032505,GO:0043093,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0071944 - 0.000000000000000000000005473 116.0
SYD3_k127_1380089_2 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 1.068e-234 736.0
SYD3_k127_1380089_3 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 7.207e-216 673.0
SYD3_k127_1380089_4 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 1.689e-203 668.0
SYD3_k127_1380089_5 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 1.967e-198 674.0
SYD3_k127_1380089_6 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 5.773e-195 637.0
SYD3_k127_1380089_7 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008805 555.0
SYD3_k127_1380089_8 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 511.0
SYD3_k127_1380089_9 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 497.0
SYD3_k127_1381437_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1353.0
SYD3_k127_1381437_1 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 541.0
SYD3_k127_1381437_2 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 522.0
SYD3_k127_1381437_3 DNA recombination-mediator protein A K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 385.0
SYD3_k127_1381437_4 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008344 343.0
SYD3_k127_1381437_5 MotA/TolQ/ExbB proton channel family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002803 278.0
SYD3_k127_1381437_6 protein trimerization - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001969 263.0
SYD3_k127_1381437_7 nuclear chromosome segregation K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000001048 237.0
SYD3_k127_1381437_8 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000000000000000000000000103 156.0
SYD3_k127_1381437_9 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000000000001028 155.0
SYD3_k127_1383963_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.0 1022.0
SYD3_k127_1383963_1 Belongs to the heme-copper respiratory oxidase family K00404,K15862 - 1.9.3.1 2.089e-247 777.0
SYD3_k127_1383963_2 ADP-glyceromanno-heptose 6-epimerase activity K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 453.0
SYD3_k127_1383963_5 iron ion homeostasis - - - 0.000000000000000000000000000000001121 152.0
SYD3_k127_1383963_6 cheY-homologous receiver domain - - - 0.000000000000000000815 91.0
SYD3_k127_1393591_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 0.0 1082.0
SYD3_k127_1393591_1 Cytochrome C oxidase subunit II, periplasmic domain K00376 - 1.7.2.4 7.164e-311 959.0
SYD3_k127_1393591_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 3.027e-250 782.0
SYD3_k127_1393591_3 Cytochrome c - - - 2.364e-237 736.0
SYD3_k127_1393591_4 PFAM Rieske 2Fe-2S domain K02636,K03886 - 1.10.9.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006771 321.0
SYD3_k127_1393591_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009733 243.0
SYD3_k127_1393591_6 PFAM regulatory protein TetR - - - 0.00000000000000000000000000000000000000000000000000000000000000137 225.0
SYD3_k127_1393591_7 GGDEF domain - - - 0.0002103 45.0
SYD3_k127_1396730_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1224.0
SYD3_k127_1396730_1 4Fe-4S dicluster domain - - - 7.5e-274 844.0
SYD3_k127_1396730_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001 591.0
SYD3_k127_1396730_3 alpha/beta hydrolase fold K22318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 433.0
SYD3_k127_1396730_5 Peptidase family M54 K06974 - - 0.000000000000000000000000000000000000000000000000000000000001616 240.0
SYD3_k127_1398656_0 NYN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006863 406.0
SYD3_k127_1398656_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 289.0
SYD3_k127_1398656_2 PFAM Major Facilitator Superfamily K08177 - - 0.0000000000000000000000000000000000000000001386 160.0
SYD3_k127_1398656_3 DbpA RNA binding domain K05592 - 3.6.4.13 0.0000000000000000000000000000002231 125.0
SYD3_k127_1398656_4 - - - - 0.0005027 53.0
SYD3_k127_140073_0 Armadillo/beta-catenin-like repeats - - - 0.00000000000000000000000000000000000000001215 167.0
SYD3_k127_140073_1 PBS lyase HEAT domain protein repeat-containing protein - - - 0.0001643 45.0
SYD3_k127_1420952_0 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 336.0
SYD3_k127_142802_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 9.624e-225 718.0
SYD3_k127_142802_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 1.288e-198 623.0
SYD3_k127_142802_10 Transcription factor zinc-finger K09981 - - 0.000000000000000000000000000000000000000000000000000000000000000659 224.0
SYD3_k127_142802_11 S-adenosylhomocysteine deaminase activity K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000002251 136.0
SYD3_k127_142802_13 energy transducer activity K03832 - - 0.00002911 49.0
SYD3_k127_142802_2 PFAM amidohydrolase K20810 - 3.5.4.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 485.0
SYD3_k127_142802_3 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005784 437.0
SYD3_k127_142802_4 Oxidoreductase molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006976 409.0
SYD3_k127_142802_5 UbiA prenyltransferase family K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 419.0
SYD3_k127_142802_6 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 366.0
SYD3_k127_142802_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004755 318.0
SYD3_k127_142802_8 Belongs to the GbsR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 291.0
SYD3_k127_142802_9 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.00000000000000000000000000000000000000000000000000000000000000000003298 233.0
SYD3_k127_1428807_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 1.428e-255 798.0
SYD3_k127_1428807_1 Maltogenic Amylase, C-terminal domain K05341,K05343 - 2.4.1.4,3.2.1.1,5.4.99.16 3.36e-248 770.0
SYD3_k127_1428807_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004816 520.0
SYD3_k127_1428807_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000000000000000000000007702 212.0
SYD3_k127_1428807_5 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000002102 170.0
SYD3_k127_1428807_6 Domain of unknown function (DUF4395) - - - 0.000368 49.0
SYD3_k127_1428890_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 4.632e-297 914.0
SYD3_k127_1428890_1 2,4-dienoyl-coa reductase K00219 - 1.3.1.34 1.835e-217 682.0
SYD3_k127_1428890_10 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000001451 152.0
SYD3_k127_1428890_2 AAA domain - - - 5.773e-205 645.0
SYD3_k127_1428890_3 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003829 475.0
SYD3_k127_1428890_4 Tellurite resistance protein TerB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008334 323.0
SYD3_k127_1428890_5 glucosamine-6-phosphate deaminase activity K01057,K02564 - 3.1.1.31,3.5.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002821 282.0
SYD3_k127_1428890_6 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840 - 5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000001319 263.0
SYD3_k127_1428890_7 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000000000000000000000000000000000000000207 207.0
SYD3_k127_1428890_8 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000003582 180.0
SYD3_k127_1428890_9 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K00082,K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000006917 156.0
SYD3_k127_1429136_0 response regulator K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004054 427.0
SYD3_k127_1429136_1 Binds the 23S rRNA K02909 - - 0.000000000000000000000000000000000000000000001915 168.0
SYD3_k127_1429136_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000007261 76.0
SYD3_k127_14374_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1229.0
SYD3_k127_14374_1 ABC transporter transmembrane region K06147 - - 6.75e-298 928.0
SYD3_k127_14374_10 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004445 461.0
SYD3_k127_14374_11 Glycosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 450.0
SYD3_k127_14374_12 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007776 243.0
SYD3_k127_14374_13 Glyoxalase-like domain K08234 - - 0.000000000000000000000000000003137 128.0
SYD3_k127_14374_14 Glyoxalase-like domain K08234 - - 0.0000000000000000000000000002042 114.0
SYD3_k127_14374_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 5.046e-219 689.0
SYD3_k127_14374_3 Polysaccharide biosynthesis protein K17947 - 5.1.3.25 5.75e-196 619.0
SYD3_k127_14374_4 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006658 613.0
SYD3_k127_14374_5 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 576.0
SYD3_k127_14374_6 Male sterility protein K12454 - 5.1.3.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006215 584.0
SYD3_k127_14374_7 Glycosyl transferases group 1 K06320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006794 558.0
SYD3_k127_14374_8 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 487.0
SYD3_k127_14374_9 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 481.0
SYD3_k127_1438472_0 Glycosyl transferase family 21 - - - 8.716e-281 868.0
SYD3_k127_1438472_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003252 603.0
SYD3_k127_1438472_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 600.0
SYD3_k127_1438472_3 Peptidase family M23 K21471 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003105 474.0
SYD3_k127_1438472_4 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003099 377.0
SYD3_k127_1438472_5 HAD-hyrolase-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 320.0
SYD3_k127_1438472_6 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001574 263.0
SYD3_k127_1438472_7 ABC transporter K09812 - - 0.0000000000000000000000000000000000000000000000000000002873 194.0
SYD3_k127_1441256_0 Methyl-viologen-reducing hydrogenase, delta subunit K14128 - 1.8.98.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 582.0
SYD3_k127_1441256_1 Nickel-dependent hydrogenase K14126 - 1.8.98.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 422.0
SYD3_k127_1443424_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit K02118 - - 3.223e-246 780.0
SYD3_k127_1443424_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 464.0
SYD3_k127_1446645_0 Protoglobin - GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005515,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0019825,GO:0020037,GO:0023014,GO:0023052,GO:0035556,GO:0036094,GO:0036211,GO:0042802,GO:0042803,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046906,GO:0046983,GO:0048037,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0097159,GO:0140096,GO:1901363,GO:1901564 - 5.573e-195 613.0
SYD3_k127_1446645_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 562.0
SYD3_k127_1446645_2 response regulator K02481,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 507.0
SYD3_k127_1446645_3 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009664 359.0
SYD3_k127_1446645_4 CBS domain K04767,K07168,K07182 - - 0.00000000000000000000000000000000000000000000000000000000000000003364 235.0
SYD3_k127_1446645_5 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000007092 233.0
SYD3_k127_1449879_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 559.0
SYD3_k127_1449879_1 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 435.0
SYD3_k127_1449879_2 Nucleic-acid-binding protein implicated in transcription termination K02600,K07742 - - 0.0000000000000000000000003297 117.0
SYD3_k127_1459494_0 Domain of unknown function (DUF4388) K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 614.0
SYD3_k127_1459494_1 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 320.0
SYD3_k127_1460200_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 3.482e-246 766.0
SYD3_k127_1460200_1 - - - - 0.000000000000000000000000000000000000000000000005929 198.0
SYD3_k127_1460200_3 - - - - 0.000000000000000000000000000000000000000001761 163.0
SYD3_k127_1462065_0 Biotin carboxylase K01965,K01968 - 6.4.1.3,6.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001353 279.0
SYD3_k127_1464121_0 DHH family K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006151 314.0
SYD3_k127_1464121_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000567 123.0
SYD3_k127_1464121_2 Zn-ribbon protein possibly nucleic acid-binding K07164 - - 0.000000000000000000000001707 117.0
SYD3_k127_1465575_0 Deoxyhypusine synthase K00809 - 2.5.1.46 1.296e-231 719.0
SYD3_k127_1465575_1 Arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000399 579.0
SYD3_k127_1465575_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 489.0
SYD3_k127_1465575_3 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006075 273.0
SYD3_k127_1465575_4 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000022 138.0
SYD3_k127_1465575_5 toxin biosynthetic process K03558 - - 0.0000000000000000002437 102.0
SYD3_k127_1465575_6 Transcriptional regulator - - - 0.000000000000005781 74.0
SYD3_k127_1467906_0 glycosyl transferase family K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.0 1082.0
SYD3_k127_1467906_1 Maltogenic Amylase, C-terminal domain K05341,K05343 - 2.4.1.4,3.2.1.1,5.4.99.16 4.491e-284 919.0
SYD3_k127_1467906_10 PFAM Conserved TM helix repeat-containing protein - - - 0.000000000000000000000000000000000003349 160.0
SYD3_k127_1467906_11 Regulatory protein, FmdB family - - - 0.00000000001892 67.0
SYD3_k127_1467906_12 - - - - 0.000000000237 66.0
SYD3_k127_1467906_13 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.00001241 57.0
SYD3_k127_1467906_2 Major Facilitator Superfamily K08177 - - 1.934e-217 681.0
SYD3_k127_1467906_3 Predicted membrane protein (DUF2339) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 556.0
SYD3_k127_1467906_4 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 489.0
SYD3_k127_1467906_5 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 336.0
SYD3_k127_1467906_6 Transcriptional regulator, LysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006879 334.0
SYD3_k127_1467906_7 glycosyl transferase family 2 K21349 - 2.4.1.268 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002845 308.0
SYD3_k127_1467906_8 Integral membrane protein (intg_mem_TP0381) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002093 281.0
SYD3_k127_1467906_9 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.00000000000000000000000000000000000000000000000000001549 197.0
SYD3_k127_1485821_0 UPF0313 protein - - - 1.605e-315 971.0
SYD3_k127_1485821_1 domain, Protein - - - 0.000000000000000000000000001412 117.0
SYD3_k127_1487658_0 Tetratricopeptide repeat - - - 2.338e-220 696.0
SYD3_k127_1487658_1 Domain of unknown function (DUF4175) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003385 377.0
SYD3_k127_1487658_2 ATPase associated with various cellular activities K03924 - - 0.000000000000000000000000000000000006628 154.0
SYD3_k127_148948_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K02337,K14162 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 6.03e-321 988.0
SYD3_k127_1502009_0 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 1.49e-312 978.0
SYD3_k127_1502009_1 MatE K03327 - - 1.335e-204 648.0
SYD3_k127_1502009_10 PFAM Archease protein family (DUF101 UPF0211) K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000004425 193.0
SYD3_k127_1502009_11 peptidase activity, acting on L-amino acid peptides - - - 0.00000000000000000000000204 120.0
SYD3_k127_1502009_13 Carbohydrate binding module (family 6) - - - 0.0000552 56.0
SYD3_k127_1502009_2 Transmembrane secretion effector - - - 6.654e-194 617.0
SYD3_k127_1502009_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004286 627.0
SYD3_k127_1502009_4 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004263 575.0
SYD3_k127_1502009_5 Belongs to the RtcB family K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 537.0
SYD3_k127_1502009_6 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535,K13599 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 499.0
SYD3_k127_1502009_7 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 313.0
SYD3_k127_1502009_8 Rhomboid family K07059 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 297.0
SYD3_k127_1502009_9 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.0000000000000000000000000000000000000000000000000000000000000000000000773 260.0
SYD3_k127_1508824_0 Fibronectin type 3 domain - - - 0.0 1250.0
SYD3_k127_1521297_0 dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 347.0
SYD3_k127_1521297_1 N-terminal half of MaoC dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001088 238.0
SYD3_k127_1527323_0 Response regulator receiver - - - 4.245e-256 829.0
SYD3_k127_1527323_1 Histidine kinase A domain protein K02482 - 2.7.13.3 6.383e-237 742.0
SYD3_k127_1527323_2 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 451.0
SYD3_k127_1527323_3 phosphoglycolate phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000597 326.0
SYD3_k127_1527323_4 Belongs to the D-alanine--D-alanine ligase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003071 260.0
SYD3_k127_1527323_5 DNA-binding protein with PD1-like DNA-binding motif K06934 - - 0.000000000000000000000000000000006853 139.0
SYD3_k127_1542262_0 PFAM Poly-beta-hydroxybutyrate polymerase domain protein K03821 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 567.0
SYD3_k127_1542262_1 de-polymerase K05973 - 3.1.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 442.0
SYD3_k127_1542262_10 PAS fold - - - 0.000000000000000000005437 105.0
SYD3_k127_1542262_11 cheY-homologous receiver domain - - - 0.000000000000000003152 97.0
SYD3_k127_1542262_2 Benzoyl-CoA reductase subunit K04115 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007781 399.0
SYD3_k127_1542262_3 3-hydroxyacyl-CoA dehydrogenase domain protein K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 338.0
SYD3_k127_1542262_4 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 319.0
SYD3_k127_1542262_5 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004565 283.0
SYD3_k127_1542262_6 PFAM MaoC like domain - - - 0.0000000000000000000000000000000000000000000000000001471 190.0
SYD3_k127_1542262_7 Benzoyl-CoA reductase subunit K04114 - 1.3.7.8 0.000000000000000000000000000000000000008317 145.0
SYD3_k127_1542262_8 PFAM PHA accumulation regulator DNA-binding protein - - - 0.0000000000000000000000000000001679 138.0
SYD3_k127_1542262_9 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000001767 138.0
SYD3_k127_1544469_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 8.405e-226 704.0
SYD3_k127_1544469_1 Methyltransferase type 11 K03892 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 462.0
SYD3_k127_1544469_2 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003404 375.0
SYD3_k127_1548871_0 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 395.0
SYD3_k127_1548871_1 TIGRFAM efflux transporter, RND family, MFP subunit K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008096 321.0
SYD3_k127_1548871_2 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) K10794 - 1.21.4.1 0.0000000000000000000000000000000376 131.0
SYD3_k127_1548871_3 - - - - 0.000000000237 66.0
SYD3_k127_1565964_0 Nad-dependent epimerase dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000332 265.0
SYD3_k127_1565964_1 adenosine 5'-monophosphoramidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000003127 216.0
SYD3_k127_1565964_3 Angiotensin-converting enzyme K01283 - 3.4.15.1 0.00000000001468 68.0
SYD3_k127_1576973_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 2.306e-269 837.0
SYD3_k127_1576973_1 Related to alanyl-tRNA synthetase HxxxH domain K01872,K07050 - 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 354.0
SYD3_k127_1576973_2 regulation of translation K05809 - - 0.00000000000000000000000000000000000000000000000000000000834 213.0
SYD3_k127_1577621_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 2.497e-254 789.0
SYD3_k127_1577621_1 Bacterial protein of unknown function (DUF853) K06915 - - 8.687e-243 757.0
SYD3_k127_1577621_2 Elongator protein 3, MiaB family, Radical SAM K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 345.0
SYD3_k127_1577621_3 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007014 320.0
SYD3_k127_1577621_4 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000129 255.0
SYD3_k127_1577621_5 Bacterial protein of unknown function (DUF937) - - - 0.0000000000000000000000002051 113.0
SYD3_k127_1581652_0 AMP-binding enzyme - - - 1.347e-259 816.0
SYD3_k127_1581652_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695,K03696 - - 2.909e-198 624.0
SYD3_k127_1581652_2 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002289 589.0
SYD3_k127_1581652_3 Chalcone and stilbene synthases, C-terminal domain K16167,K19580 - 2.3.1.233 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005491 561.0
SYD3_k127_1581652_4 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004597 509.0
SYD3_k127_1581652_5 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 432.0
SYD3_k127_1581652_6 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000001761 101.0
SYD3_k127_1584642_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006474 396.0
SYD3_k127_1584642_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 325.0
SYD3_k127_1584642_2 pseudouridine synthase activity K06176 - 5.4.99.27 0.00000000000000000000000000001114 124.0
SYD3_k127_1599896_0 DEAD/H associated K03724 - - 0.0 2001.0
SYD3_k127_1599896_1 PFAM Major facilitator superfamily K08224 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 517.0
SYD3_k127_1599896_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 466.0
SYD3_k127_1599896_3 Belongs to the methyltransferase superfamily K07444,K12297 - 2.1.1.173,2.1.1.264 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 348.0
SYD3_k127_1599896_4 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000000000000000000000000000000000000001515 229.0
SYD3_k127_1599896_7 Protein of unknown function (DUF423) - - - 0.0000000000000000000000000000000000000000000000000008932 189.0
SYD3_k127_1599896_8 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000000000000000000000001636 188.0
SYD3_k127_160708_0 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 0.0 1468.0
SYD3_k127_160708_1 UvrD-like helicase C-terminal domain - - - 0.0 1055.0
SYD3_k127_160708_10 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008564 423.0
SYD3_k127_160708_11 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005592 398.0
SYD3_k127_160708_12 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005966 360.0
SYD3_k127_160708_13 Phenazine biosynthesis protein, PhzF family K06998 - 5.3.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 351.0
SYD3_k127_160708_14 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008072 328.0
SYD3_k127_160708_15 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004928 301.0
SYD3_k127_160708_16 formate transmembrane transporter activity K06212,K21990,K21993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 299.0
SYD3_k127_160708_17 PFAM secretion protein HlyD family protein K01993 - - 0.000000000000000000000000000000000000000000000000000000000343 215.0
SYD3_k127_160708_18 - - - - 0.0000000000000000000000000000000000000000000000000000002838 197.0
SYD3_k127_160708_19 ATP-independent chaperone mediated protein folding - - - 0.000000000000000000000000000000000000000000000000000006418 195.0
SYD3_k127_160708_2 ABC transporter C-terminal domain K06158 - - 0.0 1016.0
SYD3_k127_160708_20 - - - - 0.000000000000000000000000000000000000000000001069 171.0
SYD3_k127_160708_22 Major Facilitator Superfamily K08177 - - 0.0000000000000000000153 93.0
SYD3_k127_160708_3 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 2.115e-313 973.0
SYD3_k127_160708_4 two component, sigma54 specific, transcriptional regulator, Fis family K07713 - - 8.232e-206 690.0
SYD3_k127_160708_5 4Fe-4S dicluster domain K00124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 564.0
SYD3_k127_160708_6 PFAM ATP-binding region, ATPase domain protein K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 537.0
SYD3_k127_160708_7 HAMP domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003395 525.0
SYD3_k127_160708_8 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 518.0
SYD3_k127_160708_9 Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 450.0
SYD3_k127_1608148_0 acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006853 493.0
SYD3_k127_1608148_1 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006119 265.0
SYD3_k127_160815_0 Von Willebrand factor type A K07114 - - 5.01e-221 698.0
SYD3_k127_160815_1 Von Willebrand factor type A K07114 - - 0.000001754 58.0
SYD3_k127_161395_0 PFAM Pyruvate phosphate dikinase, PEP K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005367 338.0
SYD3_k127_1649710_0 AAA domain K10742 - 3.6.4.12 6.112e-305 951.0
SYD3_k127_1649710_1 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 503.0
SYD3_k127_1649710_2 RNase_H superfamily K07502 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 394.0
SYD3_k127_1649710_3 Acid phosphatase homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000846 282.0
SYD3_k127_1649710_4 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000601 228.0
SYD3_k127_1649710_5 Ser-tRNA(Ala) hydrolase activity K01872 - 6.1.1.7 0.00000000000000000000000000000000000000000000009285 172.0
SYD3_k127_1649710_6 PFAM Smr protein MutS2 - - - 0.00000000000000000000000000000000004365 156.0
SYD3_k127_1649710_7 arsenate reductase K00537 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 1.20.4.1 0.00000000000000000004535 104.0
SYD3_k127_1654305_0 peptidase U62 modulator of DNA gyrase - - - 8.802e-270 840.0
SYD3_k127_1654305_1 Heparinase II/III N-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 510.0
SYD3_k127_1654305_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 434.0
SYD3_k127_1654305_3 peptide catabolic process K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001697 288.0
SYD3_k127_1654305_4 Protein of unknown function (DUF1207) - - - 0.00000000000000000000000000000000000000000000000000000000000000001377 227.0
SYD3_k127_1654305_6 Leucine-rich repeat (LRR) protein - - - 0.0000000000000000000000000000000000000000000000000000000002401 226.0
SYD3_k127_1659470_0 Aerotolerance regulator N-terminal - - - 0.000000000000000000001693 108.0
SYD3_k127_1683408_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000004954 196.0
SYD3_k127_170806_0 TIGRFAM cytochrome C family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005632 439.0
SYD3_k127_170806_1 Cell division protein FtsQ K03589 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 379.0
SYD3_k127_170806_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000001883 104.0
SYD3_k127_170806_3 TPR repeat - - - 0.00000005447 66.0
SYD3_k127_1726271_0 histidyl-tRNA synthetase K01892 - 6.1.1.21 6.501e-236 736.0
SYD3_k127_1726271_1 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002585 477.0
SYD3_k127_1726271_2 Belongs to the phosphatidylserine decarboxylase family K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 462.0
SYD3_k127_1726271_3 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001411 268.0
SYD3_k127_1731768_0 Heat shock 70 kDa protein K04043 - - 1.626e-206 645.0
SYD3_k127_1731768_1 cellulase activity K01179 - 3.2.1.4 0.0000000000000002337 84.0
SYD3_k127_1763364_0 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008723 363.0
SYD3_k127_1763364_1 GPR1 FUN34 yaaH family protein K07034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006276 305.0
SYD3_k127_1763364_2 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0017144,GO:0018130,GO:0019752,GO:0032259,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 291.0
SYD3_k127_1784652_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 1.349e-208 661.0
SYD3_k127_1784652_1 cheY-homologous receiver domain - - - 0.00000000000000000000001102 106.0
SYD3_k127_17879_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 6.714e-275 857.0
SYD3_k127_17879_1 DUF1704 - - - 1.724e-234 730.0
SYD3_k127_17879_10 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000000002508 173.0
SYD3_k127_17879_11 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000009434 123.0
SYD3_k127_17879_12 Pkd domain containing protein - - - 0.000000000000000001956 99.0
SYD3_k127_17879_13 Phosphoribosyl-AMP cyclohydrolase K01496,K01497,K01523,K01814,K11755 GO:0000105,GO:0000287,GO:0003674,GO:0003824,GO:0004635,GO:0004636,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016810,GO:0016814,GO:0016817,GO:0016818,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0043167,GO:0043169,GO:0043207,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0052803,GO:0071704,GO:0071944,GO:0075136,GO:0075139,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.19,3.5.4.25,3.6.1.31,5.3.1.16 0.0000000005807 66.0
SYD3_k127_17879_2 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 5.129e-212 690.0
SYD3_k127_17879_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 639.0
SYD3_k127_17879_4 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003884 575.0
SYD3_k127_17879_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 450.0
SYD3_k127_17879_6 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 378.0
SYD3_k127_17879_7 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 353.0
SYD3_k127_17879_8 Imidazoleglycerol-phosphate dehydratase K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004614 333.0
SYD3_k127_17879_9 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000000000000000000000000000003777 231.0
SYD3_k127_1797939_0 Prephenate dehydratase K04518,K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 496.0
SYD3_k127_1797939_1 HAD-hyrolase-like K06019 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 316.0
SYD3_k127_1797939_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.000000000000000000000000000000000000006031 169.0
SYD3_k127_1797939_4 cheY-homologous receiver domain K03413 - - 0.000000000000000000008821 96.0
SYD3_k127_1797939_5 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000001233 95.0
SYD3_k127_1801206_0 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000000000000005759 179.0
SYD3_k127_1801206_1 UvrD/REP helicase N-terminal domain - - - 0.0000000000000000000000000000000000000000005318 171.0
SYD3_k127_1873262_0 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 330.0
SYD3_k127_1873262_1 Membrane K08988 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007134 313.0
SYD3_k127_1873262_2 TPM domain K06872 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004246 278.0
SYD3_k127_1873262_4 Sodium/hydrogen exchanger family K11105 - - 0.00000000000001667 73.0
SYD3_k127_1877079_0 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 0.0 1330.0
SYD3_k127_1877079_1 Helicase - - - 0.0 1279.0
SYD3_k127_1877079_10 PFAM zinc finger SWIM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001141 287.0
SYD3_k127_1877079_11 Thioredoxin K03672 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000001329 250.0
SYD3_k127_1877079_13 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000007768 238.0
SYD3_k127_1877079_14 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000001846 218.0
SYD3_k127_1877079_15 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 0.00000000000000000000000000000000000000000000000000000000000105 242.0
SYD3_k127_1877079_16 - - - - 0.000000000000000000009424 105.0
SYD3_k127_1877079_19 transferase activity, transferring glycosyl groups - - - 0.000002355 56.0
SYD3_k127_1877079_2 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1199.0
SYD3_k127_1877079_3 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 0.0 1088.0
SYD3_k127_1877079_4 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 1.407e-313 971.0
SYD3_k127_1877079_5 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 - 3.6.3.12 1.138e-278 867.0
SYD3_k127_1877079_6 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 1.614e-218 736.0
SYD3_k127_1877079_7 Transcriptional regulatory protein, C terminal K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005836 392.0
SYD3_k127_1877079_8 protein histidine kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007855 357.0
SYD3_k127_1877079_9 L-lysine 6-monooxygenase (NADPH-requiring) K07222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004638 315.0
SYD3_k127_1877527_0 Cytochrome C assembly protein - - - 1.024e-265 833.0
SYD3_k127_1877527_1 PFAM peptidase M20 K01438 - 3.5.1.16 1.025e-209 655.0
SYD3_k127_1877527_2 Amidohydrolase family K05603 - 3.5.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003963 561.0
SYD3_k127_1877527_3 Protein of unknown function (DUF1109) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005085 317.0
SYD3_k127_1877527_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001199 263.0
SYD3_k127_1877527_5 Protein of unknown function (DUF3455) - - - 0.0000000000000000000000000000001306 136.0
SYD3_k127_1877527_6 cytochrome c biogenesis protein - - - 0.000000000000000000000000000002415 121.0
SYD3_k127_1886949_0 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 282.0
SYD3_k127_1886949_1 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002863 269.0
SYD3_k127_1886949_2 Carbamoyl-phosphate synthetase ammonia chain K01955 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000001899 259.0
SYD3_k127_1912960_0 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000001569 193.0
SYD3_k127_1912960_1 PFAM Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 0.000000000000000000000000000000000000000000006237 172.0
SYD3_k127_1978762_0 Protein of unknown function (DUF1298) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 340.0
SYD3_k127_1978762_1 ORF located using Glimmer GeneMark Blastx COG0697 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000174 273.0
SYD3_k127_1978762_2 Alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000005762 237.0
SYD3_k127_1978762_3 radical SAM domain protein - - - 0.00000000000000000000000000000000000005493 148.0
SYD3_k127_1991275_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 6.811e-238 754.0
SYD3_k127_1991275_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001535 222.0
SYD3_k127_1991275_2 Response regulator receiver domain - - - 0.000000000000000000000000000000000000000000000000002141 193.0
SYD3_k127_1991275_5 ribosome binding - - - 0.00000000000003537 86.0
SYD3_k127_1999577_0 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 473.0
SYD3_k127_200080_0 General secretory system II, protein E domain protein K02454 - - 0.0 1074.0
SYD3_k127_200080_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 6.209e-306 946.0
SYD3_k127_200080_10 LrgB-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004632 312.0
SYD3_k127_200080_11 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 300.0
SYD3_k127_200080_12 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002183 276.0
SYD3_k127_200080_13 - - - - 0.0000000000000000000000000000000000000000000000000000003534 200.0
SYD3_k127_200080_15 transmembrane transcriptional regulator (Anti-sigma factor) - - - 0.000000000000000000000000000000000000000009113 170.0
SYD3_k127_200080_16 LrgA family K06518 - - 0.000000000000000000000000000000000005823 139.0
SYD3_k127_200080_17 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000001341 151.0
SYD3_k127_200080_18 Regulatory protein, FmdB family - - - 0.000000000000000000006598 100.0
SYD3_k127_200080_19 Tetratricopeptide repeat - - - 0.0000000001479 74.0
SYD3_k127_200080_2 ATPase family associated with various cellular activities (AAA) - - - 3.926e-246 807.0
SYD3_k127_200080_3 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 559.0
SYD3_k127_200080_4 Cellulose synthase K00694,K20541 - 2.4.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 571.0
SYD3_k127_200080_5 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 511.0
SYD3_k127_200080_6 Inositol monophosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 435.0
SYD3_k127_200080_7 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005232 347.0
SYD3_k127_200080_8 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 356.0
SYD3_k127_200080_9 PFAM Acetyl-CoA hydrolase transferase K01067,K18118 - 2.8.3.18,3.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 315.0
SYD3_k127_2009962_0 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 511.0
SYD3_k127_2009962_2 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 448.0
SYD3_k127_2009962_3 shikimate kinase activity K00891,K13829 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71,4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000004826 247.0
SYD3_k127_2009962_4 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000000000000000002256 236.0
SYD3_k127_2014184_0 methylamine metabolic process K15977 - - 0.00000000000000000000000000000000000000000000001289 181.0
SYD3_k127_2014184_1 conserved protein (DUF2267) - - - 0.0000000000000000000000000000000000000000000009711 172.0
SYD3_k127_2014184_2 Sugar (and other) transporter - - - 0.0000000000000135 73.0
SYD3_k127_2014184_4 endonuclease activity K07451 - - 0.0009726 42.0
SYD3_k127_203879_0 AMP-binding enzyme K01897 - 6.2.1.3 1.307e-304 946.0
SYD3_k127_203879_1 Histidine kinase K02668,K07709 - 2.7.13.3 8.261e-244 766.0
SYD3_k127_203879_11 PFAM response regulator receiver - - - 0.000000000000000000000006866 106.0
SYD3_k127_203879_12 PFAM Cobyrinic acid ac-diamide synthase K03496 - - 0.000000000000000000004388 92.0
SYD3_k127_203879_13 cytochrome c nitrite reductase K15876 - - 0.00002173 48.0
SYD3_k127_203879_2 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 2.034e-237 739.0
SYD3_k127_203879_3 two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 3.192e-235 782.0
SYD3_k127_203879_4 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 1.751e-229 743.0
SYD3_k127_203879_5 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 595.0
SYD3_k127_203879_6 Anion-transporting ATPase K01551 - 3.6.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004538 476.0
SYD3_k127_203879_7 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003742 384.0
SYD3_k127_203879_8 PFAM Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000001693 201.0
SYD3_k127_203879_9 SMART PAS domain containing protein - - - 0.0000000000000000000000000000000000000000000000052 192.0
SYD3_k127_2047912_0 ABC-type polar amino acid transport system, ATPase component K10004 - - 0.000000000000000000000000000000000000000000000000000000000002005 210.0
SYD3_k127_2086952_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005206 335.0
SYD3_k127_2086952_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005044 312.0
SYD3_k127_2086952_2 DNA-dependent DNA replication K02315,K04076 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000005126 203.0
SYD3_k127_2086952_3 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000000000000000000000000002589 162.0
SYD3_k127_2099411_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 334.0
SYD3_k127_2099411_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005725 298.0
SYD3_k127_2099411_2 regulation of DNA repair K03565 - - 0.00000000000000000000000000000000000000000000000000399 185.0
SYD3_k127_2118367_0 NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 499.0
SYD3_k127_2118367_1 Transcriptional regulator, LysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007897 379.0
SYD3_k127_2144698_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0 1193.0
SYD3_k127_2144698_1 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000001552 211.0
SYD3_k127_2144698_2 PFAM Glycosyl transferase, group 1 K08256 - 2.4.1.345 0.0000000000000000000000000000000000000000000000002308 179.0
SYD3_k127_2144698_4 Haemolysin secretion/activation protein ShlB/FhaC/HecB - GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00000000000000000000001013 120.0
SYD3_k127_2150413_0 PFAM lipopolysaccharide biosynthesis protein K16692 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 597.0
SYD3_k127_2181400_0 Multicopper oxidase - - - 3.364e-202 660.0
SYD3_k127_2181400_1 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains K21405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004074 432.0
SYD3_k127_2181400_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003961 377.0
SYD3_k127_2181400_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.00000000000000000000000000000000000005858 156.0
SYD3_k127_2181400_4 Sigma-54 interaction domain K07713,K07714 - - 0.000000000000000000000000000000007963 148.0
SYD3_k127_2181400_5 MOSC domain - - - 0.00000000004187 68.0
SYD3_k127_218723_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1574.0
SYD3_k127_218723_1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins - - - 1.169e-211 686.0
SYD3_k127_218723_2 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006291 451.0
SYD3_k127_218723_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 382.0
SYD3_k127_218723_4 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015,K15893 - 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000374 263.0
SYD3_k127_218723_5 PFAM PHP domain protein K01104 - 3.1.3.48 0.000000000000000000000000000000000000000000000000000000000000000001316 242.0
SYD3_k127_218723_6 Domain of unknown function (DUF4272) - - - 0.000000000000000000000000000003597 130.0
SYD3_k127_2202061_0 40-residue yvtn family beta-propeller repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 601.0
SYD3_k127_2202061_1 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000009384 251.0
SYD3_k127_2202061_2 Domain of unknown function (DUF305) - - - 0.0000000000000000000000000000000526 143.0
SYD3_k127_2202061_3 DNA-templated transcription, initiation K03088 - - 0.0000000000000000008838 101.0
SYD3_k127_2236827_0 PFAM MMPL family K07003 - - 3.691e-292 931.0
SYD3_k127_2236827_1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00042 - 1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 449.0
SYD3_k127_2236827_10 Haem-degrading - - - 0.0000000000000000000000000006686 118.0
SYD3_k127_2236827_2 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781 - 5.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 405.0
SYD3_k127_2236827_3 Protein of unknown function (DUF1295) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003493 283.0
SYD3_k127_2236827_4 Phosphoenolpyruvate phosphomutase K01637 - 4.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000003187 254.0
SYD3_k127_2236827_5 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003402 251.0
SYD3_k127_2236827_6 short-chain dehydrogenase K07124 - - 0.00000000000000000000000000000000000000000000000000000000002996 227.0
SYD3_k127_2236827_7 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000000000000000005635 207.0
SYD3_k127_2236827_9 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000003598 172.0
SYD3_k127_2248432_0 Serine Threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 340.0
SYD3_k127_2248432_1 - - - - 0.00000000000000000000000000000000000000001896 158.0
SYD3_k127_2255457_0 homoserine dehydrogenase - - - 4.311e-200 638.0
SYD3_k127_2255457_1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 0.000000000004851 66.0
SYD3_k127_2255457_2 indolepyruvate ferredoxin oxidoreductase activity K00179,K08941 - 1.2.7.8 0.000000001209 63.0
SYD3_k127_2275181_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001454 261.0
SYD3_k127_2275181_1 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000005543 227.0
SYD3_k127_2275181_2 His Kinase A (phospho-acceptor) domain K02484,K07645 - 2.7.13.3 0.0000000000000000000000000000000000000122 166.0
SYD3_k127_2275181_3 cytochrome - - - 0.000000000000000000000000000000000000035 162.0
SYD3_k127_2275181_4 Sigma-54 interaction domain K07713,K07714,K07715 - - 0.00000000000000000000000000000000001005 153.0
SYD3_k127_2275181_5 Domain of unknown function (DUF1924) - - - 0.00000000000000000000000000008659 132.0
SYD3_k127_2275181_6 Dihaem cytochrome c - - - 0.0000000000000000000000000005041 130.0
SYD3_k127_2275181_7 phage shock operon rhodanese PspE K03972 - - 0.000000000000000000000001203 118.0
SYD3_k127_2316372_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 7.043e-222 703.0
SYD3_k127_2316372_1 Haloacid dehalogenase, type II K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003371 317.0
SYD3_k127_232039_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 8.224e-248 773.0
SYD3_k127_232039_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652 - 2.3.1.29,2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007835 625.0
SYD3_k127_232039_2 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012,K16180 - 2.8.1.6,5.4.99.58 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 582.0
SYD3_k127_232039_3 Threonine dehydratase K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008567 318.0
SYD3_k127_232039_4 Cytochrome b(N-terminal)/b6/petB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003516 254.0
SYD3_k127_232039_5 Rieske [2Fe-2S] domain K02636,K03886 - 1.10.9.1 0.0000000000000000000000000000000000000000000000000000000000007082 217.0
SYD3_k127_232039_6 Protein of unknown function (DUF2905) - - - 0.0000000000000000000000000001485 115.0
SYD3_k127_232039_7 - - - - 0.0000000000000000004564 87.0
SYD3_k127_232039_8 Restriction endonuclease K07448 - - 0.0000001094 63.0
SYD3_k127_23255_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 370.0
SYD3_k127_23255_1 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01028 - 2.8.3.5 0.0000000000000000000000000000000000000000000000000000000001126 205.0
SYD3_k127_2335391_0 cell septum assembly - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 381.0
SYD3_k127_2335391_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009787 275.0
SYD3_k127_236232_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1307.0
SYD3_k127_236232_1 ABC-type transport system involved in lipoprotein release permease component K02004 - - 6.746e-201 655.0
SYD3_k127_236232_10 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003534 344.0
SYD3_k127_236232_11 PFAM regulatory protein TetR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 312.0
SYD3_k127_236232_12 Strictosidine synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009925 330.0
SYD3_k127_236232_13 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005136 284.0
SYD3_k127_236232_14 Initiates the rapid degradation of small, acid-soluble proteins during spore germination - - - 0.00000000000000000000000000000000000000000000000000000000000005496 217.0
SYD3_k127_236232_15 Biotin-lipoyl like - - - 0.0000000000000000000000000000000000000000000000000000000000002172 232.0
SYD3_k127_236232_16 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000001722 209.0
SYD3_k127_236232_17 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000007485 197.0
SYD3_k127_236232_18 PFAM amino acid-binding ACT domain protein - - - 0.000000000000000000000000000000000000000000003922 169.0
SYD3_k127_236232_19 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009986,GO:0030246,GO:0030247,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:2001065 - 0.0000000000000000000000000000000001107 138.0
SYD3_k127_236232_2 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 1.018e-196 619.0
SYD3_k127_236232_20 protein histidine kinase activity - - - 0.00000000000000000000001004 109.0
SYD3_k127_236232_21 PFAM regulatory protein TetR - - - 0.0000000000000000000001963 106.0
SYD3_k127_236232_3 Zinc-binding dehydrogenase K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008325 552.0
SYD3_k127_236232_4 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005329 534.0
SYD3_k127_236232_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003485 506.0
SYD3_k127_236232_6 Glycosyl transferase family group 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 504.0
SYD3_k127_236232_7 Aminoglycoside phosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 498.0
SYD3_k127_236232_8 Aspartyl protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 458.0
SYD3_k127_236232_9 PFAM ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008422 414.0
SYD3_k127_2381701_0 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009667 428.0
SYD3_k127_2381701_1 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001587 262.0
SYD3_k127_2381701_11 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000001951 87.0
SYD3_k127_2381701_12 antisigma factor binding K02066,K02660,K04749,K04757,K05946,K06378 - 2.4.1.187,2.7.11.1 0.0000000002122 66.0
SYD3_k127_2381701_2 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000006548 252.0
SYD3_k127_2381701_3 membrane - - - 0.000000000000000000000000000000000000000000000000000007075 211.0
SYD3_k127_2381701_4 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000000006261 196.0
SYD3_k127_2381701_5 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.0000000000000000000000000000000000000000000001311 180.0
SYD3_k127_2381701_6 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000000000000000000000001931 159.0
SYD3_k127_2381701_7 Thiol disulfide interchange protein K04084 - 1.8.1.8 0.00000000000000000000000000000002152 131.0
SYD3_k127_2381701_8 Thioredoxin-like - - - 0.000000000000000000000000000005046 123.0
SYD3_k127_2381701_9 Rhodanese Homology Domain - - - 0.000000000000000000000005012 106.0
SYD3_k127_2387490_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008496 601.0
SYD3_k127_2387490_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 546.0
SYD3_k127_2387490_10 RNA modification enzyme, MiaB family K18707 - 2.8.4.5 0.000000000006737 72.0
SYD3_k127_2387490_2 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03547 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007384 520.0
SYD3_k127_2387490_3 tRNA nucleotidyltransferase domain 2 putative K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000627 510.0
SYD3_k127_2387490_4 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 484.0
SYD3_k127_2387490_5 P-loop containing region of AAA domain K03546 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005202 316.0
SYD3_k127_2387490_7 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003507 284.0
SYD3_k127_2387490_8 - - - - 0.000000000000000000000000000000000000002294 147.0
SYD3_k127_2400490_0 Cation efflux family K16264 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007948 439.0
SYD3_k127_243460_0 Belongs to the FtsK SpoIIIE SftA family K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006632 552.0
SYD3_k127_243460_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 387.0
SYD3_k127_243460_2 zinc-ribbon domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008596 335.0
SYD3_k127_243460_3 Transcription factor zinc-finger K09981 - - 0.00000000000000000000000000000000000000000000000000000001706 198.0
SYD3_k127_243460_4 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000005463 141.0
SYD3_k127_248221_0 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000001096 169.0
SYD3_k127_2511386_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 494.0
SYD3_k127_2511386_2 NUDIX domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005991 289.0
SYD3_k127_253764_0 heat shock protein binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008959 475.0
SYD3_k127_253764_1 Histidine kinase K07710,K10125 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000366 387.0
SYD3_k127_25672_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004165 396.0
SYD3_k127_25672_1 Stigma-specific protein, Stig1 - - - 0.0005125 48.0
SYD3_k127_258205_0 Insulinase (Peptidase family M16) K07263 - - 3.165e-195 634.0
SYD3_k127_258205_1 Insulinase (Peptidase family M16) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 594.0
SYD3_k127_258205_2 pseudouridine synthase activity K06177,K06179,K06180 - 5.4.99.23,5.4.99.24,5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 336.0
SYD3_k127_2639169_0 ERAP1-like C-terminal domain - - - 5.622e-251 803.0
SYD3_k127_2639169_1 signal transduction Histidine kinase - - - 4.156e-209 672.0
SYD3_k127_2639169_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 9.248e-198 641.0
SYD3_k127_2639169_3 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 557.0
SYD3_k127_2639169_4 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 507.0
SYD3_k127_2639169_5 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 451.0
SYD3_k127_2639169_6 Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate K00598 - 2.1.1.144 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009051 376.0
SYD3_k127_2639169_7 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000003712 237.0
SYD3_k127_2639169_8 - - - - 0.000000000000000000003644 102.0
SYD3_k127_2679764_0 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004456 492.0
SYD3_k127_2679764_1 Glycine cleavage H-protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 355.0
SYD3_k127_2679764_2 Sir2 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 371.0
SYD3_k127_2679764_3 Acetoacetate decarboxylase (ADC) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005913 332.0
SYD3_k127_2679764_4 hyperosmotic response - - - 0.00000000000000000000000000000000000000000000001826 179.0
SYD3_k127_2679764_7 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.0000000000000000000000000000000000001164 147.0
SYD3_k127_2679764_8 PFAM ATP phosphoribosyltransferase - - - 0.0000000000000000000005365 108.0
SYD3_k127_2679764_9 PFAM Cupin 2, conserved barrel - - - 0.00000000000001601 78.0
SYD3_k127_2681679_0 dehydrogenase, E1 component K00164 - 1.2.4.2 0.0 1542.0
SYD3_k127_2681679_1 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 501.0
SYD3_k127_2681679_2 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00627,K00658 - 2.3.1.12,2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000003373 221.0
SYD3_k127_2692935_0 Tetratricopeptide repeat - - - 2.431e-267 895.0
SYD3_k127_2692935_1 ADP-ribosylation factor family K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 385.0
SYD3_k127_2692935_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009586 344.0
SYD3_k127_2692935_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001726 276.0
SYD3_k127_2735189_0 chaperone-mediated protein folding K21007 - - 1.842e-311 968.0
SYD3_k127_2739_0 - - - - 0.000000000000000000000000000000000000000003916 158.0
SYD3_k127_2739_1 methylamine metabolic process K15977 - - 0.000000000000000000000000000000000000001112 152.0
SYD3_k127_2739456_0 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 1.215e-320 998.0
SYD3_k127_2739456_1 sulfur dehydrogenase subunit K07147,K17225 - - 8.092e-250 776.0
SYD3_k127_2739456_2 Thiosulfate-oxidizing multienzyme system protein SoxA K17222,K19713 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005507,GO:0005515,GO:0005575,GO:0005623,GO:0006091,GO:0006464,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0016667,GO:0016669,GO:0016740,GO:0016782,GO:0016783,GO:0018192,GO:0018193,GO:0018198,GO:0018307,GO:0019417,GO:0019538,GO:0020037,GO:0022900,GO:0036211,GO:0042597,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046872,GO:0046906,GO:0046914,GO:0046982,GO:0046983,GO:0048037,GO:0055114,GO:0071704,GO:0097159,GO:0098822,GO:1901363,GO:1901564 1.8.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 457.0
SYD3_k127_2739456_3 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 392.0
SYD3_k127_2739456_4 Cytochrome c K17223 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009807 313.0
SYD3_k127_2739456_5 Sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002483 254.0
SYD3_k127_2739456_6 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000438 204.0
SYD3_k127_2739456_7 Sulphur oxidation protein SoxZ K17227 - - 0.00000000000000000000000000000000000000000000000000003978 189.0
SYD3_k127_2739456_8 thiosulfate sulfurtransferase activity K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000005344 185.0
SYD3_k127_2739456_9 PFAM glycoside hydrolase family 3 domain protein K05349 - 3.2.1.21 0.00003188 47.0
SYD3_k127_2739885_0 Cytochrome C and Quinol oxidase polypeptide I K15408 - 1.9.3.1 0.0 1368.0
SYD3_k127_2739885_1 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003935 591.0
SYD3_k127_2739885_10 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) K02351 - - 0.0000000000000000000000000000000000000000000000000000000000000001784 233.0
SYD3_k127_2739885_11 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.0000000000000000000000000000000000000000000000000001968 197.0
SYD3_k127_2739885_13 - - - - 0.0000000000000000000000000006324 132.0
SYD3_k127_2739885_14 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000004419 104.0
SYD3_k127_2739885_15 Uncharacterized conserved protein (DUF2267) - - - 0.00000000000000003254 91.0
SYD3_k127_2739885_16 Cyclic nucleotide-monophosphate binding domain K10914 - - 0.00000000000005316 81.0
SYD3_k127_2739885_2 ribonuclease BN K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 487.0
SYD3_k127_2739885_3 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 485.0
SYD3_k127_2739885_4 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004759 463.0
SYD3_k127_2739885_5 TIGRFAM Hydrogenase accessory protein HypB K04652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007091 443.0
SYD3_k127_2739885_6 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004163 409.0
SYD3_k127_2739885_7 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 401.0
SYD3_k127_2739885_8 hydrogenase expression formation protein HypE K04655 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006562 324.0
SYD3_k127_2739885_9 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006866 348.0
SYD3_k127_2742640_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 2.988e-301 928.0
SYD3_k127_2742640_1 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 1.97e-219 687.0
SYD3_k127_2742640_2 Serine Threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007269 512.0
SYD3_k127_2742640_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005054 429.0
SYD3_k127_2742640_4 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000000000000000000009583 214.0
SYD3_k127_2744791_0 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005722 567.0
SYD3_k127_2744791_1 Response regulator, receiver - - - 0.000000000000000000000000000000003359 139.0
SYD3_k127_2744791_2 - - - - 0.000000000000000000001488 95.0
SYD3_k127_2744791_4 Biopterin-dependent aromatic amino acid hydroxylase K00500 - 1.14.16.1 0.0000005363 57.0
SYD3_k127_2754370_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 9.466e-321 988.0
SYD3_k127_2754370_1 Multicopper oxidase - - - 8.739e-252 790.0
SYD3_k127_2754370_2 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 1.067e-204 661.0
SYD3_k127_2754370_3 Transketolase, pyrimidine binding domain K00162,K00167 - 1.2.4.1,1.2.4.4 6.169e-197 615.0
SYD3_k127_2754370_4 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008984 546.0
SYD3_k127_2754370_5 HD domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 555.0
SYD3_k127_2754370_6 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 506.0
SYD3_k127_2754370_7 methyltransferase activity K13613,K15677 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 333.0
SYD3_k127_2754370_8 B12 binding domain K01849 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000002339 250.0
SYD3_k127_2754370_9 acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000002606 185.0
SYD3_k127_2757421_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 2.28e-260 806.0
SYD3_k127_2766591_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 599.0
SYD3_k127_2766591_1 oxidoreductase activity K00274 - 1.4.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 532.0
SYD3_k127_2766591_12 Recombinase zinc beta ribbon domain K06400 - - 0.00002618 48.0
SYD3_k127_2766591_2 HNH endonuclease K07454 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 549.0
SYD3_k127_2766591_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 450.0
SYD3_k127_2766591_4 PLD-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 346.0
SYD3_k127_2766591_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005671 328.0
SYD3_k127_2766591_6 Excises ethenocytosine and uracil, which can arise by alkylation or deamination of cytosine, respectively, from the corresponding mispairs with guanine in ds-DNA. It is capable of hydrolyzing the carbon-nitrogen bond between the sugar-phosphate backbone of the DNA and the mispaired base. The complementary strand guanine functions in substrate recognition. Required for DNA damage lesion repair in stationary-phase cells K03649 - 3.2.2.28 0.000000000000000000000000000000000000000000000000001717 193.0
SYD3_k127_2766591_7 Galactose oxidase, central domain - - - 0.00000000000000000000000000000000000000000000000004189 198.0
SYD3_k127_2766591_8 Beta-lactamase K01286 - 3.4.16.4 0.00000000000000000000000000000000000000000009719 181.0
SYD3_k127_2778532_0 4Fe-4S single cluster domain of Ferredoxin I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 423.0
SYD3_k127_2778532_1 Protein of unknown function (DUF1232) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001376 262.0
SYD3_k127_2778532_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.00000000000000000000000000000000008487 134.0
SYD3_k127_2808956_0 Biopterin-dependent aromatic amino acid hydroxylase K00500 - 1.14.16.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 477.0
SYD3_k127_2808956_1 PFAM Rhomboid family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001609 286.0
SYD3_k127_2808956_2 oxygen carrier activity K07216 - - 0.000000000000000000000000000000000000000000001735 170.0
SYD3_k127_2828421_0 P-loop containing region of AAA domain K03546 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005233 364.0
SYD3_k127_2828421_1 endonuclease activity K07451 - - 0.0000000000000000000000000000000000000000000003165 173.0
SYD3_k127_2840322_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 414.0
SYD3_k127_2840519_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 407.0
SYD3_k127_2840519_1 amine dehydrogenase activity - - - 0.000000000000000000000000002171 122.0
SYD3_k127_2840519_2 PFAM NHL repeat containing protein - - - 0.000000000000224 78.0
SYD3_k127_2841042_0 Belongs to the bacterial solute-binding protein 9 family K02077,K09815,K09818 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004511 329.0
SYD3_k127_2841042_1 - - - - 0.0000000000000000000000001651 123.0
SYD3_k127_2843841_0 GDP-mannose 4,6 dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 547.0
SYD3_k127_2843841_1 Acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 481.0
SYD3_k127_2843841_2 Hsp33 protein K04083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 428.0
SYD3_k127_2843841_3 Phosphoribosyl transferase domain K07101 - - 0.0000000000000000000000000000000000000001875 164.0
SYD3_k127_2843841_4 zinc-ribbon domain - - - 0.0000000000000000004006 101.0
SYD3_k127_286739_0 PFAM periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 437.0
SYD3_k127_286739_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008244 341.0
SYD3_k127_286739_10 Cyclase dehydrase - - - 0.00000000000000000000000000000000000000000000004592 179.0
SYD3_k127_286739_11 DoxX - - - 0.0000000000000000000000000000000000006886 151.0
SYD3_k127_286739_12 YceI-like domain - - - 0.00000000000000000000000000004254 123.0
SYD3_k127_286739_13 - - - - 0.00000000000000000000000001979 111.0
SYD3_k127_286739_14 CoA binding domain - - - 0.00000000000000000002786 91.0
SYD3_k127_286739_16 TIGRFAM death-on-curing family protein K07341 - - 0.000000000000001108 79.0
SYD3_k127_286739_18 Belongs to the SfsA family K06206 - - 0.000000007469 68.0
SYD3_k127_286739_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 294.0
SYD3_k127_286739_3 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005184 267.0
SYD3_k127_286739_4 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004909 270.0
SYD3_k127_286739_5 Phospholipid methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000001641 227.0
SYD3_k127_286739_6 Flavin reductase like domain - - - 0.0000000000000000000000000000000000000000000000000000000000001755 216.0
SYD3_k127_286739_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000006033 192.0
SYD3_k127_286739_9 protein possibly involved in aromatic compounds catabolism - - - 0.00000000000000000000000000000000000000000000001911 184.0
SYD3_k127_2869402_0 Methionine synthase K00548 - 2.1.1.13 1.304e-294 909.0
SYD3_k127_2871564_0 MltA specific insert domain K08304 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004252 589.0
SYD3_k127_2871564_1 Exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000921 563.0
SYD3_k127_2871564_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008012 476.0
SYD3_k127_2871564_3 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 422.0
SYD3_k127_2871564_4 Membrane protein, TerC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 380.0
SYD3_k127_2871564_5 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 290.0
SYD3_k127_2871564_6 Electron transfer flavoprotein K03522 - - 0.0000000000000000000000219 99.0
SYD3_k127_2880120_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007147 599.0
SYD3_k127_2880120_1 Protein of unknown function (DUF815) K06923 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007487 499.0
SYD3_k127_2880120_2 Fumarate reductase, iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 480.0
SYD3_k127_2880120_3 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 319.0
SYD3_k127_2880120_4 response regulator K07685 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003144 273.0
SYD3_k127_2880120_5 fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000004806 112.0
SYD3_k127_288705_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 9.991e-246 775.0
SYD3_k127_288705_1 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 7.106e-200 646.0
SYD3_k127_288705_10 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000000000000000000000000009793 179.0
SYD3_k127_288705_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 590.0
SYD3_k127_288705_3 PBS lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 436.0
SYD3_k127_288705_4 riboflavin synthase, alpha K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 334.0
SYD3_k127_288705_6 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000000000000000000000000000000000000006421 275.0
SYD3_k127_288705_7 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008671 246.0
SYD3_k127_288705_8 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000000000000000000000000000001461 237.0
SYD3_k127_288705_9 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000002794 210.0
SYD3_k127_2903083_0 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 7.321e-222 691.0
SYD3_k127_2903083_1 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 482.0
SYD3_k127_2903083_10 Protein of unknown function (FYDLN_acid) - - - 0.000000000000000000008899 95.0
SYD3_k127_2903083_2 daunorubicin resistance ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009097 430.0
SYD3_k127_2903083_3 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004305 414.0
SYD3_k127_2903083_4 abc transporter atp-binding protein K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 386.0
SYD3_k127_2903083_5 Phosphate transporter family K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000044 342.0
SYD3_k127_2903083_6 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001739 279.0
SYD3_k127_2903083_7 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000001778 261.0
SYD3_k127_2903083_8 Protein of unknown function (DUF420) K08976 - - 0.0000000000000000000000000000000000000000000000002667 196.0
SYD3_k127_2903083_9 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000001205 179.0
SYD3_k127_2904789_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 1.201e-206 646.0
SYD3_k127_2904789_1 diguanylate cyclase - - - 2.873e-198 633.0
SYD3_k127_2904789_2 chemotaxis K03408 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002003 283.0
SYD3_k127_2904789_3 - - - - 0.00000000000000000000000000000000000000000000000000000000001238 221.0
SYD3_k127_2904789_4 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000003002 188.0
SYD3_k127_2904789_5 phosphate ion binding - - - 0.00000000000000000000018 115.0
SYD3_k127_2910330_0 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 469.0
SYD3_k127_2912787_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1669.0
SYD3_k127_291784_0 Phosphate transporter family K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 608.0
SYD3_k127_291784_1 Belongs to the radical SAM superfamily. RlmN family K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006932 550.0
SYD3_k127_291784_2 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 332.0
SYD3_k127_291784_3 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000009757 57.0
SYD3_k127_2929431_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 6.791e-269 833.0
SYD3_k127_2929431_1 Belongs to the PdxA family K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 485.0
SYD3_k127_2929431_2 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769,K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 439.0
SYD3_k127_2929431_3 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003111 443.0
SYD3_k127_2929431_4 SurA N-terminal domain K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007099 369.0
SYD3_k127_2929431_5 transglutaminase-like - - - 0.00000000000000000000000000000000000000000000000000002501 193.0
SYD3_k127_2939501_0 Male sterility protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005837 571.0
SYD3_k127_2939501_1 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003645 539.0
SYD3_k127_2939501_10 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000005472 256.0
SYD3_k127_2939501_11 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000001219 234.0
SYD3_k127_2939501_12 MaoC like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000003712 226.0
SYD3_k127_2939501_14 amine dehydrogenase activity K21449 - - 0.00000000000000000000000000000000000000000000000000000000001281 213.0
SYD3_k127_2939501_15 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000008867 182.0
SYD3_k127_2939501_17 YCII-related domain K09780 - - 0.0000000000000000000000000000000000002162 144.0
SYD3_k127_2939501_19 Protein of unknown function (DUF2378) - - - 0.000000000000000000000000009464 124.0
SYD3_k127_2939501_2 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007973 462.0
SYD3_k127_2939501_20 N-terminal half of MaoC dehydratase - - - 0.000000000001299 70.0
SYD3_k127_2939501_21 - - - - 0.00005384 48.0
SYD3_k127_2939501_22 Leucine zipper protein 6 - - - 0.0009538 45.0
SYD3_k127_2939501_3 PFAM Endonuclease Exonuclease phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 402.0
SYD3_k127_2939501_4 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002483 364.0
SYD3_k127_2939501_5 fatty acid hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 343.0
SYD3_k127_2939501_6 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 310.0
SYD3_k127_2939501_7 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 324.0
SYD3_k127_2939501_8 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004292 300.0
SYD3_k127_2939501_9 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002218 265.0
SYD3_k127_2942338_0 Signal transduction histidine kinase - - - 1.901e-201 631.0
SYD3_k127_2942338_1 Two component, sigma54 specific, transcriptional regulator, Fis family K07712 - - 0.0000000000000000000000000000000000000000000000000000000001857 203.0
SYD3_k127_2981942_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 2.681e-230 733.0
SYD3_k127_2981942_1 PFAM Prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 393.0
SYD3_k127_2981942_2 PFAM Chorismate mutase of the AroH class K06208 - 5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000008731 229.0
SYD3_k127_2981942_3 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000796 212.0
SYD3_k127_2981942_5 HpcH/HpaI aldolase/citrate lyase family K01644,K14451 - 3.1.2.30,4.1.3.34 0.0003061 43.0
SYD3_k127_2986998_0 Belongs to the FtsK SpoIIIE SftA family K03466 - - 6.137e-268 830.0
SYD3_k127_2986998_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00334,K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 575.0
SYD3_k127_2986998_3 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002896 285.0
SYD3_k127_2986998_4 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000002385 232.0
SYD3_k127_2986998_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000000000000000000005044 162.0
SYD3_k127_2988918_0 aspartate glutamate uridylate kinase K00928 - 2.7.2.4 9.894e-215 694.0
SYD3_k127_2988918_1 PFAM Polysulphide reductase, NrfD - - - 3.836e-195 630.0
SYD3_k127_2988918_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 465.0
SYD3_k127_2988918_3 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003158 430.0
SYD3_k127_2988918_4 pfkB family carbohydrate kinase K00852 - 2.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 372.0
SYD3_k127_2988918_5 PFAM FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 302.0
SYD3_k127_2988918_6 Menaquinol oxidoreductase complex Cbc4, cytochrome c subunit - - - 0.00000000000000000000000000000000000000000000000000000007808 205.0
SYD3_k127_300356_0 Alpha amylase, catalytic domain K06044 - 5.4.99.15 0.0 1535.0
SYD3_k127_300356_1 4-alpha-glucanotransferase K00705 - 2.4.1.25 7.692e-277 858.0
SYD3_k127_300356_11 phosphohistidine phosphatase, SixA K08296 - - 0.00000000000000000000000000000000003886 147.0
SYD3_k127_300356_14 ATPase family associated with various cellular activities (AAA) K06027 - 3.6.4.6 0.000000000000000000000004487 115.0
SYD3_k127_300356_15 glycosyl transferase family 8 - - - 0.00000000000000000000001876 114.0
SYD3_k127_300356_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 552.0
SYD3_k127_300356_3 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 470.0
SYD3_k127_300356_4 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01885,K01894 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 493.0
SYD3_k127_300356_5 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007613 447.0
SYD3_k127_300356_6 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) K06169 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000053 278.0
SYD3_k127_300356_7 - - - - 0.000000000000000000000000000000000000000000000000000005314 199.0
SYD3_k127_300356_8 Putative inner membrane exporter, YdcZ K09936 - - 0.00000000000000000000000000000000000000000002748 171.0
SYD3_k127_3003863_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 7.808e-240 751.0
SYD3_k127_3003863_1 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 567.0
SYD3_k127_3003863_2 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005569 538.0
SYD3_k127_3003863_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 539.0
SYD3_k127_3003863_4 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 322.0
SYD3_k127_3003863_5 histidine kinase A domain protein - - - 0.00000000000000000000000000000000329 135.0
SYD3_k127_3003863_6 - - - - 0.000000001058 71.0
SYD3_k127_3003863_7 PFAM blue (type 1) copper domain protein - - - 0.00007818 50.0
SYD3_k127_3011140_0 4Fe-4S binding domain - - - 7.692e-217 686.0
SYD3_k127_3011140_1 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.00000000000000000000000000002276 123.0
SYD3_k127_3019271_0 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009606 416.0
SYD3_k127_3022577_0 Quinohemoprotein amine dehydrogenase, alpha subunit domain II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 601.0
SYD3_k127_3022577_1 Radical SAM superfamily K06871 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000352 564.0
SYD3_k127_3037515_0 response regulator K02481,K07713 - - 1.648e-215 676.0
SYD3_k127_3037515_1 TIGRFAM Caa(3)-type oxidase, subunit IV K02277 - 1.9.3.1 0.00001567 53.0
SYD3_k127_3038732_0 thiolester hydrolase activity K06889 - - 0.0000000000000000000000000000000000000000000003623 179.0
SYD3_k127_3038732_1 membrane - - - 0.0000000000000000000000000000000000002615 145.0
SYD3_k127_3038732_2 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000104 83.0
SYD3_k127_3061883_0 PFAM Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 487.0
SYD3_k127_3061883_1 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 428.0
SYD3_k127_3061883_2 PFAM Pyruvate phosphate dikinase, PEP K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 379.0
SYD3_k127_3061883_3 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005937 317.0
SYD3_k127_3061883_4 4Fe-4S dicluster domain K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 299.0
SYD3_k127_3061883_5 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008098 274.0
SYD3_k127_3061883_6 E1-E2 ATPase K01533 - 3.6.3.4 0.000000000000000000000000000000000000000000000000001118 184.0
SYD3_k127_3061883_7 - - - - 0.0000000000000000000000000000000000002847 145.0
SYD3_k127_3061883_8 Putative transmembrane protein (Alph_Pro_TM) - - - 0.000000000000000006588 100.0
SYD3_k127_308613_0 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 530.0
SYD3_k127_308613_1 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 422.0
SYD3_k127_308613_2 Acyl-CoA dehydrogenase, C-terminal domain K00253 - 1.3.8.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000007768 263.0
SYD3_k127_308613_3 YceI-like domain - - - 0.000000000000000000000000000000000000004576 154.0
SYD3_k127_308613_4 Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000007839 147.0
SYD3_k127_308613_5 YceI-like domain - - - 0.000000000000000000000000000000000004231 145.0
SYD3_k127_308613_6 Hexapeptide repeat of succinyl-transferase - - - 0.00000000000000000000000000000003565 142.0
SYD3_k127_308613_8 - - - - 0.0000000000000000000000007524 119.0
SYD3_k127_3096584_0 Domain of unknown function (DUF4091) - - - 1.338e-246 775.0
SYD3_k127_3096584_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 501.0
SYD3_k127_3096584_2 Pectinacetylesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009918 322.0
SYD3_k127_3096584_3 Polysaccharide biosynthesis protein - - - 0.00000000001156 69.0
SYD3_k127_311344_0 Belongs to the RtcB family K14415 - 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006597 363.0
SYD3_k127_311344_1 long-chain fatty acid transporting porin activity K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 340.0
SYD3_k127_311344_2 Protein of unknown function, DUF255 K06888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008365 252.0
SYD3_k127_3120506_0 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006789 518.0
SYD3_k127_3120506_1 histone H2A K63-linked ubiquitination - - - 0.00000000000000000000000000000000001082 154.0
SYD3_k127_3125991_0 Predicted membrane protein (DUF2339) - - - 0.0000000000000000000000000000000000000000000000002348 190.0
SYD3_k127_3141195_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 6.784e-301 930.0
SYD3_k127_3141195_1 CBS domain containing protein K07182 - - 9.392e-246 828.0
SYD3_k127_3141195_10 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 297.0
SYD3_k127_3141195_11 EXOIII K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 294.0
SYD3_k127_3141195_12 Domain of unknown function (DUF4212) - - - 0.000000000000000000000000000000001001 137.0
SYD3_k127_3141195_14 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.0000000000000000008664 90.0
SYD3_k127_3141195_2 CBS domain containing protein K07182 - - 4.166e-244 767.0
SYD3_k127_3141195_3 Sugar (and other) transporter - - - 6.124e-244 776.0
SYD3_k127_3141195_4 CBS domain containing protein K07182 - - 1.908e-215 701.0
SYD3_k127_3141195_5 Diacylglycerol kinase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 518.0
SYD3_k127_3141195_6 Nucleoside H+ symporter K05820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005281 488.0
SYD3_k127_3141195_7 Nucleotidyl transferase K00966,K16881 - 2.7.7.13,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 464.0
SYD3_k127_3141195_8 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 476.0
SYD3_k127_3141195_9 Protein serine threonine phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009471 421.0
SYD3_k127_3152274_0 Transcriptional regulator K03717 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 531.0
SYD3_k127_3152274_1 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 461.0
SYD3_k127_3152274_2 Membrane protein, TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 433.0
SYD3_k127_3152274_3 Pfam 2OG-Fe(II) oxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005086 247.0
SYD3_k127_3152274_4 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.0000000000000000000000000000000000000000006925 158.0
SYD3_k127_3155013_0 oxidoreductase activity - - - 0.0 1167.0
SYD3_k127_3155013_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 7.375e-308 994.0
SYD3_k127_3155013_10 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000442 370.0
SYD3_k127_3155013_11 40-residue YVTN family beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007413 352.0
SYD3_k127_3155013_12 GAF domain K21405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 363.0
SYD3_k127_3155013_13 COG3284 Transcriptional activator of acetoin glycerol metabolism K21405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 352.0
SYD3_k127_3155013_14 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 293.0
SYD3_k127_3155013_15 MoeA C-terminal region (domain IV) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009148 300.0
SYD3_k127_3155013_16 Putative heavy-metal chelation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006861 272.0
SYD3_k127_3155013_17 heterodisulfide reductase K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000001884 278.0
SYD3_k127_3155013_18 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000007962 259.0
SYD3_k127_3155013_19 Bacterial extracellular solute-binding proteins, family 3 - - - 0.0000000000000000000000000000000000000000000000000000000000008214 220.0
SYD3_k127_3155013_2 TIGRFAM PQQ-dependent dehydrogenase, methanol ethanol family K00114 - 1.1.2.8 4.83e-266 850.0
SYD3_k127_3155013_20 NADH ubiquinone oxidoreductase, 20 Kd subunit K14128 - 1.8.98.5 0.0000000000000000000000000000000000000000000000000000003072 213.0
SYD3_k127_3155013_21 Belongs to the LarC family K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000001713 197.0
SYD3_k127_3155013_22 molybdopterin cofactor binding K00123,K00367,K18558 - 1.17.1.9,1.7.7.2 0.00000000000000000000000000000000000000000000000001988 201.0
SYD3_k127_3155013_23 Nickel-dependent hydrogenase K14126 - 1.8.98.5 0.00000000000000000000000000000000000000000000002703 186.0
SYD3_k127_3155013_24 Methyl-viologen-reducing hydrogenase, delta subunit K14127,K14128 - 1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000001244 190.0
SYD3_k127_3155013_25 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000003654 171.0
SYD3_k127_3155013_26 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000002652 158.0
SYD3_k127_3155013_27 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000009878 164.0
SYD3_k127_3155013_28 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000003705 141.0
SYD3_k127_3155013_29 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000001918 122.0
SYD3_k127_3155013_3 Beta propeller domain - - - 4.413e-245 774.0
SYD3_k127_3155013_30 cheY-homologous receiver domain - - - 0.00000000000000000000000006513 121.0
SYD3_k127_3155013_31 protein heterodimerization activity - - - 0.00000000000000003155 83.0
SYD3_k127_3155013_4 MoeA C-terminal region (domain IV) - - - 1.34e-244 793.0
SYD3_k127_3155013_5 FMN-binding domain protein - - - 5.654e-229 738.0
SYD3_k127_3155013_6 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 647.0
SYD3_k127_3155013_7 Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 535.0
SYD3_k127_3155013_8 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006065 534.0
SYD3_k127_3155013_9 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 408.0
SYD3_k127_3169543_0 Sigma-54 interaction domain K07713,K07714 - - 1.06e-230 749.0
SYD3_k127_3169543_1 Histidine kinase - - - 8.075e-219 688.0
SYD3_k127_3169543_10 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000266 209.0
SYD3_k127_3169543_11 Mo-molybdopterin cofactor metabolic process K03636,K21147 - 2.7.7.80,2.8.1.11 0.0000000000000000000000000000000001922 150.0
SYD3_k127_3169543_12 - - - - 0.000000000000000000000000000000002579 134.0
SYD3_k127_3169543_13 Domain of unknown function (DUF4382) - - - 0.00000000000001243 85.0
SYD3_k127_3169543_2 Pyridoxal-phosphate dependent enzyme K01697,K01738 - 2.5.1.47,4.2.1.22 9.595e-215 676.0
SYD3_k127_3169543_3 cellulose binding - - - 1.372e-214 671.0
SYD3_k127_3169543_4 protein trimerization - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 379.0
SYD3_k127_3169543_5 O-methyltransferase K00588 - 2.1.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 359.0
SYD3_k127_3169543_6 Lactonase, 7-bladed beta-propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000001746 252.0
SYD3_k127_3169543_7 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000000000000002036 233.0
SYD3_k127_3169543_8 metal cluster binding K06940 - - 0.000000000000000000000000000000000000000000000000000000000000162 240.0
SYD3_k127_3169543_9 Protein of unknown function (DUF456) K09793 - - 0.00000000000000000000000000000000000000000000000000000005934 204.0
SYD3_k127_3188664_0 copper-translocating P-type ATPase K17686 - 3.6.3.54 0.0 1292.0
SYD3_k127_3188664_1 Molydopterin dinucleotide binding domain K08352 - 1.8.5.5 0.0 1203.0
SYD3_k127_3188664_10 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 295.0
SYD3_k127_3188664_11 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002059 279.0
SYD3_k127_3188664_12 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000001404 239.0
SYD3_k127_3188664_13 fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000001447 220.0
SYD3_k127_3188664_14 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000002883 228.0
SYD3_k127_3188664_16 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000001831 188.0
SYD3_k127_3188664_17 DNA-binding transcription factor activity K03892,K22298 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0008150,GO:0010035,GO:0010038,GO:0010045,GO:0032025,GO:0042221,GO:0050896,GO:0097159,GO:1901363 - 0.00000000000000000000000000000000004148 136.0
SYD3_k127_3188664_18 DNA-binding transcription factor activity K03892,K22298 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0008150,GO:0010035,GO:0010038,GO:0010045,GO:0032025,GO:0042221,GO:0050896,GO:0097159,GO:1901363 - 0.000000000000000000000000000000058 134.0
SYD3_k127_3188664_2 Elongation factor G, domain IV K02355 - - 0.0 1122.0
SYD3_k127_3188664_3 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 3.845e-194 610.0
SYD3_k127_3188664_4 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 552.0
SYD3_k127_3188664_5 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 393.0
SYD3_k127_3188664_6 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007415 411.0
SYD3_k127_3188664_7 PFAM Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 386.0
SYD3_k127_3188664_8 UPF0056 inner membrane protein K05595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009461 330.0
SYD3_k127_3188664_9 fumarate reductase) cytochrome b subunit K00241 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007966 304.0
SYD3_k127_3199213_0 Belongs to the NifD NifK NifE NifN family K02587 - - 0.0 1566.0
SYD3_k127_3199213_1 SMART Elongator protein 3 MiaB NifB K02585 - - 3.379e-223 704.0
SYD3_k127_3199213_11 - - - - 0.0000000000000000000000002933 116.0
SYD3_k127_3199213_12 domain, Protein - - - 0.00000001358 59.0
SYD3_k127_3199213_2 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 610.0
SYD3_k127_3199213_3 amino acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 559.0
SYD3_k127_3199213_4 aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008189 503.0
SYD3_k127_3199213_5 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 332.0
SYD3_k127_3199213_6 Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 327.0
SYD3_k127_3199213_7 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001062 261.0
SYD3_k127_3199213_8 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000003135 164.0
SYD3_k127_3199213_9 Dinitrogenase iron-molybdenum cofactor biosynthesis protein K02596 - - 0.00000000000000000000000000000000000000000003524 165.0
SYD3_k127_320257_0 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 2.416e-205 655.0
SYD3_k127_320257_1 PBS lyase HEAT-like repeat - - - 6.361e-197 626.0
SYD3_k127_320257_10 Uracil DNA glycosylase superfamily K03648 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006655 337.0
SYD3_k127_320257_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004686 287.0
SYD3_k127_320257_12 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005768 302.0
SYD3_k127_320257_13 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003493 254.0
SYD3_k127_320257_14 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000005093 163.0
SYD3_k127_320257_15 cheY-homologous receiver domain - - - 0.00000000000000000000000000000008732 143.0
SYD3_k127_320257_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 578.0
SYD3_k127_320257_3 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 517.0
SYD3_k127_320257_4 PFAM MOFRL domain protein K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007872 513.0
SYD3_k127_320257_6 Protein of unknown function (DUF533) K11962 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 484.0
SYD3_k127_320257_7 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007489 427.0
SYD3_k127_320257_8 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008919 370.0
SYD3_k127_320257_9 thiolester hydrolase activity K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008138 353.0
SYD3_k127_3205313_0 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009032 521.0
SYD3_k127_3205313_1 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003812 484.0
SYD3_k127_3205313_11 Putative MetA-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000007666 198.0
SYD3_k127_3205313_12 Belongs to the LarC family K09121 - 4.99.1.12 0.000000000000000000000000000000000000000000000002426 174.0
SYD3_k127_3205313_13 response to copper ion K16915 - - 0.000000000000000000000000000001161 137.0
SYD3_k127_3205313_14 - - - - 0.000000000000000000000002805 116.0
SYD3_k127_3205313_15 PFAM Nickel transport complex, NikM subunit, transmembrane K10094 - - 0.00000000000000001522 94.0
SYD3_k127_3205313_17 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.000000002263 64.0
SYD3_k127_3205313_2 Cysteine desulfurase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 415.0
SYD3_k127_3205313_3 ThiF family K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 369.0
SYD3_k127_3205313_4 part of an ABC transporter complex. Responsible for energy coupling to the transport system K02006,K16787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008089 349.0
SYD3_k127_3205313_5 Bacterial regulatory protein, Fis family K21405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003147 336.0
SYD3_k127_3205313_6 Cobalt uptake substrate-specific transmembrane region K02007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008006 297.0
SYD3_k127_3205313_7 Elongator protein 3, MiaB family, Radical SAM K22226 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006794 306.0
SYD3_k127_3205313_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007096 262.0
SYD3_k127_3205313_9 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000008581 243.0
SYD3_k127_3247687_0 Protein-disulfide isomerase - - - 3.363e-319 990.0
SYD3_k127_3247687_1 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 1.875e-266 826.0
SYD3_k127_3247687_3 glycosyltransferase involved in LPS biosynthesis K07270 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 346.0
SYD3_k127_3247687_4 Thiamine biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001844 265.0
SYD3_k127_3247687_5 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000004648 230.0
SYD3_k127_3247687_7 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000000000000000002602 146.0
SYD3_k127_3248991_0 Methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 461.0
SYD3_k127_3248991_1 ATP-binding region ATPase domain protein K03407,K13490 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008019 420.0
SYD3_k127_3251396_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.0 1239.0
SYD3_k127_3251396_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.0 1152.0
SYD3_k127_3251396_2 AAA domain (dynein-related subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 442.0
SYD3_k127_3251396_3 VWA domain containing CoxE-like protein K07161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 372.0
SYD3_k127_3251396_4 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 299.0
SYD3_k127_3251396_5 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000004634 241.0
SYD3_k127_3253770_0 Amp-dependent synthetase and ligase K01897 - 6.2.1.3 8.956e-320 987.0
SYD3_k127_3253770_1 CoA-transferase family III K01796 - 5.1.99.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000859 597.0
SYD3_k127_3253770_10 - - - - 0.0000005972 53.0
SYD3_k127_3253770_2 Tfp pilus assembly protein FimV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000897 488.0
SYD3_k127_3253770_3 Belongs to the bacterial solute-binding protein 9 family K02077 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008584 418.0
SYD3_k127_3253770_4 ABC 3 transport family K09816 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 382.0
SYD3_k127_3253770_5 PFAM ABC transporter K09817 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 357.0
SYD3_k127_3253770_6 HemY protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 315.0
SYD3_k127_3253770_7 SCP-2 sterol transfer family - - - 0.00000000000000000000000000000000000000000000000001915 184.0
SYD3_k127_3253770_8 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000004848 201.0
SYD3_k127_3264153_0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 307.0
SYD3_k127_3264153_1 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000001852 142.0
SYD3_k127_3283275_0 Glycosyl hydrolases family 8 K00694 - 2.4.1.12 0.0 1625.0
SYD3_k127_3283275_1 PA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008808 401.0
SYD3_k127_3283275_2 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009707 271.0
SYD3_k127_3297241_1 Thioesterase-like superfamily - - - 0.000000000000000000000000000000000000000003896 158.0
SYD3_k127_3300261_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840,K15778 - 5.4.2.2,5.4.2.8 5.097e-253 794.0
SYD3_k127_3300261_1 Mannose-6-phosphate isomerase K00971 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 606.0
SYD3_k127_3300261_2 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 466.0
SYD3_k127_3300261_3 PFAM ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 447.0
SYD3_k127_3300261_4 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007627 305.0
SYD3_k127_3300261_5 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006232 267.0
SYD3_k127_3300261_6 energy transducer activity K03832 - - 0.000000000000000000000000000000000000000000000000000005458 196.0
SYD3_k127_3325997_0 NAD(P)H quinone oxidoreductase, PIG3 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004941 557.0
SYD3_k127_3325997_1 PFAM 4Fe-4S - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 326.0
SYD3_k127_3329096_0 CBS domain containing protein K06189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000355 458.0
SYD3_k127_3329096_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 338.0
SYD3_k127_336847_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 500.0
SYD3_k127_336847_1 PFAM ABC transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 421.0
SYD3_k127_336847_2 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008844 387.0
SYD3_k127_336847_3 lipopolysaccharide transport K09774 - - 0.00000000000000000000000000000000000000000000001919 182.0
SYD3_k127_336847_5 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000007873 116.0
SYD3_k127_336847_6 Rhomboid family K19225 - 3.4.21.105 0.00000000000000000000002893 116.0
SYD3_k127_3376130_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 471.0
SYD3_k127_3376130_1 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 324.0
SYD3_k127_3376130_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000193 289.0
SYD3_k127_3384775_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 6.967e-295 910.0
SYD3_k127_3384775_1 protein kinase activity K08884 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 558.0
SYD3_k127_3384775_2 Glycoside-hydrolase family GH114 K21006 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009186 436.0
SYD3_k127_3384775_3 Heparinase II/III N-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 415.0
SYD3_k127_3384775_4 Sigma-70, region 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001059 281.0
SYD3_k127_3384775_5 MerR HTH family regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003744 256.0
SYD3_k127_3386047_0 C-terminal, D2-small domain, of ClpB protein K03696 - - 0.0 1220.0
SYD3_k127_3386047_1 Protein of unknown function (DUF1343) - - - 6.692e-215 673.0
SYD3_k127_3386047_2 PFAM Glycosyl transferase, group 1 K08256 - 2.4.1.345 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 435.0
SYD3_k127_3386047_3 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007308 351.0
SYD3_k127_3386047_4 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005141 310.0
SYD3_k127_3386047_5 arylsulfatase activity - - - 0.00000000000000000007196 103.0
SYD3_k127_3386047_6 peptidyl-tyrosine sulfation - - - 0.000000000000007332 89.0
SYD3_k127_3386047_7 Uncharacterized protein conserved in bacteria (DUF2059) K09924 - - 0.00000000000004811 79.0
SYD3_k127_3394938_0 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 7.895e-239 755.0
SYD3_k127_3394938_1 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 546.0
SYD3_k127_3394938_2 UTP--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008844 387.0
SYD3_k127_3394938_3 zinc ion binding K06204 - - 0.000000000000000000000000000000000000000000005087 185.0
SYD3_k127_343716_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1573.0
SYD3_k127_343716_1 Bacterial regulatory protein, Fis family K13599 - - 1.958e-252 784.0
SYD3_k127_343716_10 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 458.0
SYD3_k127_343716_11 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003352 439.0
SYD3_k127_343716_12 Fic/DOC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 376.0
SYD3_k127_343716_13 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007346 337.0
SYD3_k127_343716_14 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002502 294.0
SYD3_k127_343716_15 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004046 262.0
SYD3_k127_343716_16 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.000000000000000000000000000000000000000000000000000000002131 207.0
SYD3_k127_343716_17 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000002637 206.0
SYD3_k127_343716_18 Ferredoxin - - - 0.000000000000000000000000000006971 122.0
SYD3_k127_343716_2 Patatin-like phospholipase - - - 4.134e-226 754.0
SYD3_k127_343716_20 Phage integrase family K07497 - - 0.0000000000000000000005382 101.0
SYD3_k127_343716_21 Transcription elongation factor, GreA/GreB, C-term K06140 - - 0.0000000000000006217 85.0
SYD3_k127_343716_22 Domain of unknown function (DU1801) - - - 0.00000000000002427 82.0
SYD3_k127_343716_3 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 2.367e-207 653.0
SYD3_k127_343716_4 PFAM phosphoesterase, RecJ domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 605.0
SYD3_k127_343716_5 Aminotransferase, class V K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003937 576.0
SYD3_k127_343716_6 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 533.0
SYD3_k127_343716_7 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 503.0
SYD3_k127_343716_8 PFAM Metallophosphoesterase K09769 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 471.0
SYD3_k127_343716_9 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 460.0
SYD3_k127_3445830_0 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 613.0
SYD3_k127_3445830_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 501.0
SYD3_k127_3445830_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 446.0
SYD3_k127_3445830_3 Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA K00556 - 2.1.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000594 353.0
SYD3_k127_3445830_4 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004948 324.0
SYD3_k127_3445830_5 RNA polymerase K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000018 232.0
SYD3_k127_3445830_6 - - - - 0.00000000000000000000000000000000000000000000000000003078 190.0
SYD3_k127_3446922_0 alpha beta alpha domain I K01840 - 5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000004903 226.0
SYD3_k127_3446922_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000006323 81.0
SYD3_k127_3459040_0 Acetyl-coenzyme A synthetase N-terminus K01895 - 6.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 587.0
SYD3_k127_3459040_1 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000005847 186.0
SYD3_k127_3459040_2 Hemerythrin HHE cation binding domain K07216 - - 0.0000000000000000000000000000000000000000000000007789 183.0
SYD3_k127_3459040_3 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000000000000006166 179.0
SYD3_k127_3459040_4 oxygen carrier activity K07216 - - 0.000000000004174 72.0
SYD3_k127_355840_0 radical SAM domain protein - - - 5.013e-218 683.0
SYD3_k127_355840_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 1.686e-207 650.0
SYD3_k127_355840_10 - - - - 0.0000000000000000000000000000000000000000000000000129 201.0
SYD3_k127_355840_2 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 5.064e-205 700.0
SYD3_k127_355840_3 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 599.0
SYD3_k127_355840_4 Zinc dependent phospholipase C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005497 498.0
SYD3_k127_355840_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 406.0
SYD3_k127_355840_6 AntiSigma factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 349.0
SYD3_k127_355840_7 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004749 356.0
SYD3_k127_355840_8 Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004018 266.0
SYD3_k127_355840_9 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001234 279.0
SYD3_k127_3575441_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 329.0
SYD3_k127_3575441_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 322.0
SYD3_k127_3575441_2 Glycine cleavage H-protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009626 310.0
SYD3_k127_3575441_3 Domain of unknown function (DUF4112) - - - 0.00000000000000000000000000194 123.0
SYD3_k127_3581907_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 484.0
SYD3_k127_3581907_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000003116 160.0
SYD3_k127_3581907_3 PFAM DsrE family protein K06039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0034214,GO:0042802,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0051259,GO:0065003,GO:0071840 - 0.000000000000000000000000000000000003606 141.0
SYD3_k127_3581907_4 Chromate transporter K07240 - - 0.0000000000000000003504 98.0
SYD3_k127_3581907_5 deoxyhypusine monooxygenase activity - - - 0.000000000000000002371 96.0
SYD3_k127_3581907_7 Chromate transporter K07240 - - 0.00001567 53.0
SYD3_k127_3610908_0 Domain of unknown function (DUF4175) - - - 5.777e-254 815.0
SYD3_k127_3610908_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007034 327.0
SYD3_k127_3618993_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0 1224.0
SYD3_k127_3618993_1 FAD linked oxidases, C-terminal domain K00102,K00104 - 1.1.2.4,1.1.3.15 4.004e-239 760.0
SYD3_k127_3618993_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009861 329.0
SYD3_k127_3618993_3 GTP cyclohydrolase I K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 290.0
SYD3_k127_3618993_4 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000000000000000000000000002407 240.0
SYD3_k127_3618993_5 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000009777 177.0
SYD3_k127_3618993_6 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000000000000000001612 176.0
SYD3_k127_3618993_7 Pyruvate flavodoxin ferredoxin K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000739 120.0
SYD3_k127_3619676_0 Carboxyl transferase domain - - - 1.69e-197 627.0
SYD3_k127_3619676_1 Transcriptional regulator - - - 0.000000000000000000000000000000000002595 143.0
SYD3_k127_3619797_0 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 392.0
SYD3_k127_3619797_1 PFAM FAD linked oxidase domain protein K00803 - 2.5.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009556 377.0
SYD3_k127_3619797_2 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 366.0
SYD3_k127_3619797_3 PFAM Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001645 245.0
SYD3_k127_3619797_4 fumarate reductase) cytochrome b subunit K00241 - - 0.00000000003579 66.0
SYD3_k127_3622225_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.0 1686.0
SYD3_k127_3622225_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 615.0
SYD3_k127_3622225_2 efflux transmembrane transporter activity K15725 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002727 510.0
SYD3_k127_3622225_3 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 370.0
SYD3_k127_3622225_4 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000001146 228.0
SYD3_k127_3622225_5 PFAM ATPase BadF BadG BcrA BcrD type - - - 0.000000000000000000000000000000000000000000000003573 196.0
SYD3_k127_3664435_0 Belongs to the acetokinase family K00929 - 2.7.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005901 527.0
SYD3_k127_3664435_1 PFAM Phosphate acetyl butaryl transferase K00634 - 2.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 373.0
SYD3_k127_3718866_0 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008156 511.0
SYD3_k127_3743656_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.482e-303 935.0
SYD3_k127_3743656_1 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 340.0
SYD3_k127_3743656_2 Transglycosylase K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 298.0
SYD3_k127_3743656_3 chromosome segregation K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002318 282.0
SYD3_k127_3743656_5 Polymer-forming cytoskeletal - - - 0.00000000000000000000000000000000000000000000000000000006114 198.0
SYD3_k127_3743656_6 Mitochondrial biogenesis AIM24 - - - 0.00000000000000000000000000000000000000009645 165.0
SYD3_k127_377397_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 9.167e-293 902.0
SYD3_k127_377397_1 PFAM peptidase M52 hydrogen uptake protein K03605 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006393 252.0
SYD3_k127_3781735_0 PFAM glycosyl transferase family 51 K05366 - 2.4.1.129,3.4.16.4 0.0 1397.0
SYD3_k127_3781735_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000201 212.0
SYD3_k127_3798672_0 Penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 0.0 1220.0
SYD3_k127_3798672_1 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 1.415e-252 788.0
SYD3_k127_3798672_2 Histidine kinase K13598 - 2.7.13.3 8.001e-201 673.0
SYD3_k127_3798672_4 dipeptide transport K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 373.0
SYD3_k127_3798672_5 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006625 323.0
SYD3_k127_3798672_6 protein trimerization - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005175 334.0
SYD3_k127_3798672_7 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003399 288.0
SYD3_k127_3798672_8 phosphoserine phosphatase homoserine phosphotransferase bifunctional protein K02203 - 2.7.1.39,3.1.3.3 0.00000000000000000002644 90.0
SYD3_k127_3814115_0 Mitochondrial biogenesis AIM24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 449.0
SYD3_k127_3814115_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007882 411.0
SYD3_k127_3814115_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 317.0
SYD3_k127_3814115_3 Transglycosylase K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007804 305.0
SYD3_k127_3814115_4 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000006089 254.0
SYD3_k127_3901259_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 2.806e-194 610.0
SYD3_k127_3901259_1 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 599.0
SYD3_k127_3901259_2 Mediates influx of magnesium ions K03284,K16074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 406.0
SYD3_k127_3901259_3 Arsenical pump membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001879 250.0
SYD3_k127_3901259_4 phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001324 241.0
SYD3_k127_3901259_5 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000002172 207.0
SYD3_k127_3901259_6 - - - - 0.00000000000000000000000000000000000000001317 157.0
SYD3_k127_394623_0 PFAM Cytochrome c oxidase, subunit I K04561 - 1.7.2.5 8.451e-222 712.0
SYD3_k127_394623_1 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005206 449.0
SYD3_k127_394623_2 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 377.0
SYD3_k127_394623_3 cytochrome c K02305 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006864 331.0
SYD3_k127_394623_4 PAP2 superfamily C-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005036 303.0
SYD3_k127_394623_5 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002698 269.0
SYD3_k127_394623_6 Enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine K01243 - 3.2.2.9 0.0000000000000000000000000000000000000000000000000000000000000000002003 250.0
SYD3_k127_394623_7 OsmC-like protein - - - 0.0000000000000000000000000000000000000008171 149.0
SYD3_k127_398097_0 PFAM AMP-dependent synthetase and ligase - - - 0.0 2423.0
SYD3_k127_398097_1 glycosyl transferase family K00697 - 2.4.1.15,2.4.1.347 1.877e-294 938.0
SYD3_k127_398097_10 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004197 441.0
SYD3_k127_398097_11 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 412.0
SYD3_k127_398097_12 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 370.0
SYD3_k127_398097_13 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009552 366.0
SYD3_k127_398097_14 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000008022 293.0
SYD3_k127_398097_15 protein disulfide oxidoreductase activity - - - 0.00000000000000000000000000000000000000000000000000000007883 201.0
SYD3_k127_398097_16 PFAM amino acid-binding ACT domain protein - - - 0.000000000000000000000000000000000000000000000000000006921 194.0
SYD3_k127_398097_2 Cytochrome c7 and related cytochrome c - - - 8.552e-238 736.0
SYD3_k127_398097_3 Belongs to the alpha-IPM synthase homocitrate synthase family K01655 - 2.3.3.14 1.122e-220 687.0
SYD3_k127_398097_4 Histidine kinase K07711,K19694 - 2.7.13.3 6.75e-207 674.0
SYD3_k127_398097_5 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 605.0
SYD3_k127_398097_6 Pyridoxal-phosphate dependent enzyme K05396 - 4.4.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 516.0
SYD3_k127_398097_8 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 459.0
SYD3_k127_398097_9 Alpha/beta hydrolase family K07019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 490.0
SYD3_k127_3985033_0 Protein of unknown function (DUF2804) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003131 272.0
SYD3_k127_3985033_1 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007702 270.0
SYD3_k127_3985033_2 nuclear chromosome segregation - - - 0.000000001123 68.0
SYD3_k127_401488_0 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 451.0
SYD3_k127_401488_1 Asparaginase K13051 - 3.4.19.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008104 417.0
SYD3_k127_401488_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 379.0
SYD3_k127_401488_3 - - - - 0.000000000000000000000000000000000000000000000000001535 202.0
SYD3_k127_401488_4 heat shock protein binding - - - 0.0000000000000000000000000009545 122.0
SYD3_k127_405749_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 1.996e-264 837.0
SYD3_k127_405749_1 DnaJ molecular chaperone homology domain K03686 - - 1.193e-229 726.0
SYD3_k127_405749_10 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000000000000000000001777 122.0
SYD3_k127_405749_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 3.804e-217 687.0
SYD3_k127_405749_3 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 608.0
SYD3_k127_405749_4 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 526.0
SYD3_k127_405749_5 acid phosphatase activity K14379 - 3.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006586 463.0
SYD3_k127_405749_6 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005264 437.0
SYD3_k127_405749_7 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005408 387.0
SYD3_k127_405749_8 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 384.0
SYD3_k127_405749_9 regulator K07773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002354 259.0
SYD3_k127_4090580_0 Protein of unknown function (DUF3131) - - - 7.294e-226 721.0
SYD3_k127_4090580_1 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004629 522.0
SYD3_k127_4090580_2 cellulose synthase K00694 - 2.4.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009935 459.0
SYD3_k127_4090580_3 Protein of unknown function (DUF3131) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 456.0
SYD3_k127_4090580_4 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 324.0
SYD3_k127_4090580_5 Glycosyl hydrolases family 16 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 323.0
SYD3_k127_4090580_6 - - - - 0.00000000001892 67.0
SYD3_k127_4090697_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0 1197.0
SYD3_k127_4090697_1 Peptidase family S58 K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004581 464.0
SYD3_k127_4094030_0 Putative modulator of DNA gyrase K03568 - - 1.964e-276 855.0
SYD3_k127_4094030_1 Putative modulator of DNA gyrase K03592 - - 9.284e-203 676.0
SYD3_k127_4094030_2 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000008982 181.0
SYD3_k127_4094920_0 DbpA RNA binding domain K05592 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004881 444.0
SYD3_k127_4094920_1 DNA-templated transcription, initiation K03088,K11333 - 1.3.7.14,1.3.7.15 0.0000000000000008969 87.0
SYD3_k127_4097179_0 ATP-binding region ATPase domain protein K03407,K13490 - 2.7.13.3 3.348e-243 755.0
SYD3_k127_4097179_1 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 2.992e-224 722.0
SYD3_k127_4097179_2 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00756,K00758 - 2.4.2.2,2.4.2.4 2.185e-221 694.0
SYD3_k127_4097179_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 518.0
SYD3_k127_4097179_4 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 489.0
SYD3_k127_4097179_5 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 463.0
SYD3_k127_4097179_6 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004379 419.0
SYD3_k127_4097179_7 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 440.0
SYD3_k127_4097179_8 Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006351 237.0
SYD3_k127_4097179_9 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.0000000000000000000000000000000000000000000000000001579 195.0
SYD3_k127_410471_0 Peptidase family M3 K01392 - 3.4.24.15 3.421e-195 639.0
SYD3_k127_410471_1 BNR repeat-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006051 347.0
SYD3_k127_4106147_0 His Kinase A (phosphoacceptor) domain - - - 0.0 1182.0
SYD3_k127_4106147_1 PFAM NmrA family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003516 322.0
SYD3_k127_4106147_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 302.0
SYD3_k127_4106147_3 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002945 264.0
SYD3_k127_4106147_4 Uncharacterised protein family UPF0066 K01628 - 4.1.2.17 0.000000000000000000000000000000000000000000000000000000002182 206.0
SYD3_k127_4106147_5 Universal stress protein - - - 0.000000000000000000000000000000000000000001764 163.0
SYD3_k127_4106147_6 - - - - 0.0000000000000000000000000000001297 131.0
SYD3_k127_4106147_7 PFAM Formylglycine-generating sulfatase enzyme K03112,K12132 - 2.7.11.1 0.000000000000000000001004 108.0
SYD3_k127_4106147_8 Carboxymuconolactone decarboxylase family - - - 0.00000000004444 65.0
SYD3_k127_4106147_9 FMN binding - - - 0.0003084 50.0
SYD3_k127_4108841_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1151.0
SYD3_k127_4108841_1 ABC-type transport system involved in lipoprotein release permease component K09808 - - 9.045e-296 920.0
SYD3_k127_4108841_10 Outer membrane protein (OmpH-like) K06142 - - 0.00000000000000000000000000000000000000000000000000000000000000388 226.0
SYD3_k127_4108841_11 Belongs to the UPF0235 family K09131 - - 0.0000000000000000000000000833 121.0
SYD3_k127_4108841_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 8.231e-284 878.0
SYD3_k127_4108841_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 559.0
SYD3_k127_4108841_4 Protein of unknown function (DUF1009) K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 458.0
SYD3_k127_4108841_5 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003605 436.0
SYD3_k127_4108841_6 endonuclease activity K07451 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 372.0
SYD3_k127_4108841_7 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000591 394.0
SYD3_k127_4108841_8 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 380.0
SYD3_k127_4108841_9 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001801 290.0
SYD3_k127_4144843_0 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 1.902e-305 945.0
SYD3_k127_4144843_1 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00112 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003851 492.0
SYD3_k127_4144843_2 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 406.0
SYD3_k127_4144843_4 helicase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001569 277.0
SYD3_k127_4144843_5 4Fe-4S dicluster domain K00125,K03646 - 1.17.1.9 0.00000000000000000000000000000000000000000000000004994 188.0
SYD3_k127_4144843_6 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 0.0000000000000000000000000000000000000000001339 175.0
SYD3_k127_4144843_7 - - - - 0.0000000231 64.0
SYD3_k127_4148506_0 Memo-like protein K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 367.0
SYD3_k127_4148506_1 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000187 171.0
SYD3_k127_4148506_2 protein import - - - 0.0000000000000000000000000308 112.0
SYD3_k127_4148506_3 Putative metal-binding motif - - - 0.0000001286 56.0
SYD3_k127_4152488_0 IgA Peptidase M64 - - - 1.154e-230 722.0
SYD3_k127_4152488_1 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009047 611.0
SYD3_k127_4152488_10 Carboxypeptidase regulatory-like domain - - - 0.00000000000000001101 94.0
SYD3_k127_4152488_11 PFAM Multicopper oxidase K08100 - 1.3.3.5 0.00000007262 65.0
SYD3_k127_4152488_2 Domain of unknown function (DUF2088) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 524.0
SYD3_k127_4152488_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000745 485.0
SYD3_k127_4152488_4 Aminotransferase K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 454.0
SYD3_k127_4152488_8 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000005862 165.0
SYD3_k127_4152488_9 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0000000000000000000000000000005532 125.0
SYD3_k127_4159988_0 Peptidase family M49 - - - 7.774e-249 780.0
SYD3_k127_4159988_1 TIGRFAM hydrogenase (NiFe) small subunit (hydA) K06282,K18008 - 1.12.2.1,1.12.99.6 4.959e-203 636.0
SYD3_k127_4159988_2 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000003888 203.0
SYD3_k127_4163997_0 response regulator K07714 - - 2.056e-208 690.0
SYD3_k127_4163997_1 pilus assembly protein K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 400.0
SYD3_k127_4163997_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004148 390.0
SYD3_k127_4163997_3 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 359.0
SYD3_k127_4163997_4 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000001202 121.0
SYD3_k127_4163997_5 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000001123 61.0
SYD3_k127_4170586_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 2.749e-255 795.0
SYD3_k127_4170586_1 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003506 293.0
SYD3_k127_4170586_2 CoA-substrate-specific enzyme activase - - - 0.000000000000000000000000000000000000000195 155.0
SYD3_k127_4170586_4 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.0000000000000000000000003804 105.0
SYD3_k127_4173659_0 HAD-hyrolase-like K06019 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000002198 208.0
SYD3_k127_4173659_1 SNF2 family N-terminal domain - - - 0.000000000000000000000000002514 129.0
SYD3_k127_4174040_0 response regulator - - - 4.308e-248 797.0
SYD3_k127_4174040_1 Histidine kinase HAMP - - - 2.796e-234 733.0
SYD3_k127_4174040_2 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 588.0
SYD3_k127_4174040_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007018 493.0
SYD3_k127_4174040_4 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 341.0
SYD3_k127_4174040_5 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007116 255.0
SYD3_k127_4174040_6 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000000000000007155 234.0
SYD3_k127_4174040_7 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000006914 185.0
SYD3_k127_4174238_0 carboxylase K01965,K01968 - 6.4.1.3,6.4.1.4 0.0000000000000000000000000000000000000000000000000000000002762 213.0
SYD3_k127_4174238_1 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000002343 200.0
SYD3_k127_4179398_1 ArgK protein K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 530.0
SYD3_k127_4179398_2 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 470.0
SYD3_k127_4179398_3 HMGL-like K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 456.0
SYD3_k127_4179398_4 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 392.0
SYD3_k127_4179398_5 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008945 395.0
SYD3_k127_418008_0 ATP-dependent helicase HrpB K03579 - 3.6.4.13 0.0 1339.0
SYD3_k127_418008_1 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 1.078e-304 948.0
SYD3_k127_418008_2 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 533.0
SYD3_k127_418008_3 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 391.0
SYD3_k127_418008_4 Phospholipase/Carboxylesterase K06999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006661 266.0
SYD3_k127_418008_5 Alpha/beta hydrolase family K07020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009257 271.0
SYD3_k127_418008_6 Belongs to the ClpA ClpB family K03694 - - 0.00000000000000000000000000000000000000000000000005209 179.0
SYD3_k127_418008_7 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000004615 180.0
SYD3_k127_418008_8 SMP-30/Gluconolaconase/LRE-like region - - - 0.0000000000000000000000255 112.0
SYD3_k127_418008_9 cellulase activity - - - 0.00000000000000000000009109 111.0
SYD3_k127_4184363_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 423.0
SYD3_k127_4184363_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002289 415.0
SYD3_k127_4184363_2 TIGRFAM hydro-lyase, Fe-S type, tartrate fumarate subfamily, beta subunit K01676,K01678 - 4.2.1.2 0.000000000000000000000000000000000000000007529 159.0
SYD3_k127_4185595_0 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 529.0
SYD3_k127_4185595_1 Protein of unknown function (DUF1698) K15257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 453.0
SYD3_k127_4185595_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006208 424.0
SYD3_k127_4185595_3 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006877 399.0
SYD3_k127_4185629_0 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004472 484.0
SYD3_k127_4185629_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007148 375.0
SYD3_k127_4185629_2 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000001625 192.0
SYD3_k127_4185629_3 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000001217 189.0
SYD3_k127_4214788_0 Proton-conducting membrane transporter K12137 - - 7.22e-243 761.0
SYD3_k127_4214788_1 NADH dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000796 414.0
SYD3_k127_4216170_0 Amidohydrolase family - - - 5.194e-203 645.0
SYD3_k127_4216170_1 Glycosyl transferase family 21 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 400.0
SYD3_k127_4216170_2 XdhC Rossmann domain K07402 - - 0.000000000000000000000000000000000000000000000000000000000006579 222.0
SYD3_k127_4216170_3 cysteine-type peptidase activity K13695 - - 0.000000000000000000000000000000000000000000000000001621 205.0
SYD3_k127_4216170_4 Carbon monoxide dehydrogenase subunit G (CoxG) - - - 0.000000000000000000000000000000000000003972 160.0
SYD3_k127_4216170_5 XdhC and CoxI family - - - 0.000000000000000000000000000000000002059 145.0
SYD3_k127_4216170_6 COG0822 NifU homolog involved in Fe-S cluster formation - - - 0.000000000000000000001004 108.0
SYD3_k127_4223205_0 STAS domain K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009324 606.0
SYD3_k127_422808_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.0 1208.0
SYD3_k127_422808_1 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 1.907e-314 968.0
SYD3_k127_422808_2 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 313.0
SYD3_k127_422808_3 EcsC protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001099 259.0
SYD3_k127_4229995_0 Electron transfer flavoprotein K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 485.0
SYD3_k127_4229995_1 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009723 407.0
SYD3_k127_4233004_0 TonB dependent receptor K02014 - - 1.902e-207 672.0
SYD3_k127_4233004_1 Cys Met metabolism K01739,K01760 - 2.5.1.48,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 533.0
SYD3_k127_4233004_2 Domain of Unknown Function (DUF748) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006804 508.0
SYD3_k127_4233004_3 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000004315 151.0
SYD3_k127_4233004_4 Peptidoglycan-binding domain 1 protein - - - 0.000000000000000000000000000000009491 147.0
SYD3_k127_4233004_5 endonuclease activity K07451 - - 0.0000000000000000000008904 97.0
SYD3_k127_4241576_0 regulation of single-species biofilm formation K13572,K13573 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008708 520.0
SYD3_k127_4242670_0 glutamine synthetase K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 326.0
SYD3_k127_4242670_1 Peptidase C14, caspase catalytic - - - 0.00000000000000000000000000000000000000000000000000000000000002209 242.0
SYD3_k127_4242670_2 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000001916 181.0
SYD3_k127_4242670_4 Regulator of chromosome condensation (RCC1) repeat - - - 0.00000000000005964 81.0
SYD3_k127_4244001_0 deoxyhypusine monooxygenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004869 273.0
SYD3_k127_4244001_1 YceI-like domain - - - 0.0000000000000000000000000001407 123.0
SYD3_k127_4262298_0 Carbamoyl-phosphate synthetase ammonia chain K01955 - 6.3.5.5 4.317e-241 749.0
SYD3_k127_4262298_1 Periplasmic copper-binding protein (NosD) K07218 - - 1.231e-231 727.0
SYD3_k127_4262298_2 ABC transporter K01990,K19340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005316 451.0
SYD3_k127_4262298_3 ABC-2 family transporter protein K19341 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 414.0
SYD3_k127_4262298_4 Cytochrome C oxidase subunit II, periplasmic domain K00376 - 1.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008803 356.0
SYD3_k127_4262298_5 lipoprotein involved in nitrous oxide reduction - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 326.0
SYD3_k127_4262298_6 lipoprotein involved in nitrous oxide reduction K19342 - - 0.0000000000000000000000000000000000000000006202 182.0
SYD3_k127_428569_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 1.137e-233 727.0
SYD3_k127_428569_1 Belongs to the CarA family K01956 - 6.3.5.5 1.303e-197 657.0
SYD3_k127_428569_2 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007618 569.0
SYD3_k127_428569_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004457 417.0
SYD3_k127_428569_5 PFAM Uncharacterised ACR, COG1259 K08999 - - 0.000000000000000000000000000000001495 139.0
SYD3_k127_4288430_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 3.342e-240 762.0
SYD3_k127_4288430_1 PFAM MscS Mechanosensitive ion channel K03442 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009528 315.0
SYD3_k127_4305588_0 PFAM UBA THIF-type NAD FAD binding protein K03148 - 2.7.7.73 2.571e-249 787.0
SYD3_k127_4305588_1 Spermine/spermidine synthase domain - - - 2.297e-205 649.0
SYD3_k127_4305588_2 endonuclease III K01247 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000001541 217.0
SYD3_k127_4305588_3 - - - - 0.00000000000000000000000000000000000000000000000000000001 202.0
SYD3_k127_4319713_0 Peptidase family M23 - - - 9.467e-194 614.0
SYD3_k127_4319713_1 SpoVR like protein K06415 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000835 545.0
SYD3_k127_4319713_2 Bacterial regulatory helix-turn-helix protein, lysR family K04761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 367.0
SYD3_k127_4319713_3 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000000000000000000000000000000000004056 216.0
SYD3_k127_4319713_4 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.00000000000000000000000000000000000000000005118 167.0
SYD3_k127_4320042_0 histidine kinase HAMP region domain protein - - - 8.887e-272 858.0
SYD3_k127_4320042_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004689 557.0
SYD3_k127_4320042_2 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 372.0
SYD3_k127_4320042_3 Phosphate transporter family K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 325.0
SYD3_k127_4320042_4 Histidine kinase K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005233 309.0
SYD3_k127_4340469_0 Sarcosine oxidase K00303 - 1.5.3.1 8.194e-247 770.0
SYD3_k127_4340469_1 2Fe-2S iron-sulfur cluster binding domain K00302 - 1.5.3.1 0.00000000000000000000000000000000000000000000000000004964 192.0
SYD3_k127_4386050_0 Putative metal-binding motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009831 404.0
SYD3_k127_4386050_1 Abortive infection protein K07052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 359.0
SYD3_k127_4386050_2 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 308.0
SYD3_k127_4403091_0 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005233 566.0
SYD3_k127_4403091_1 NAD-dependent epimerase dehydratase K01710,K08678 - 4.1.1.35,4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 545.0
SYD3_k127_4403091_2 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00177 - 1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 331.0
SYD3_k127_4403091_3 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 328.0
SYD3_k127_4403091_5 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000009943 113.0
SYD3_k127_4403091_6 Ribbon-helix-helix domain - - - 0.000000000000000000000000002816 111.0
SYD3_k127_4403091_7 repeat protein - - - 0.00000000000004258 81.0
SYD3_k127_4403091_8 DNA-templated transcription, initiation K03088 - - 0.0004005 46.0
SYD3_k127_4403567_0 Histidine kinase - - - 8.591e-247 782.0
SYD3_k127_4403567_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003926 364.0
SYD3_k127_4413978_0 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004555 365.0
SYD3_k127_4413978_1 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005438 298.0
SYD3_k127_4413978_2 Rubrerythrin - - - 0.000000000000000000000000000000008574 140.0
SYD3_k127_4415040_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.000000000000000000000000000000000004056 139.0
SYD3_k127_4415040_1 Tetratricopeptide repeat K08309 - - 0.0000000000000000000000000000000002909 151.0
SYD3_k127_4416858_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 1.582e-228 721.0
SYD3_k127_4417183_0 Pyruvate ferredoxin/flavodoxin oxidoreductase K04090 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000000002469 244.0
SYD3_k127_4417183_1 Phosphodiester glycosidase - - - 0.000000000000000000000006119 104.0
SYD3_k127_4449281_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 529.0
SYD3_k127_4449281_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 408.0
SYD3_k127_4449281_2 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003831 371.0
SYD3_k127_44568_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 9.242e-215 669.0
SYD3_k127_44568_1 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 532.0
SYD3_k127_4459609_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008003 499.0
SYD3_k127_4459609_1 TIGRFAM sulfite reductase, dissimilatory-type beta subunit K11181 - 1.8.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004251 494.0
SYD3_k127_4459609_2 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 427.0
SYD3_k127_4459609_3 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 400.0
SYD3_k127_4459609_4 Nitrite and sulphite reductase 4Fe-4S domain K11180 - 1.8.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 387.0
SYD3_k127_4459609_5 PFAM Nitrate reductase gamma subunit K00374 - 1.7.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005819 364.0
SYD3_k127_4459609_6 TIGRFAM sulfur relay protein, TusE DsrC DsvC family K11179 - - 0.00000000000000000000000000000000000000005569 158.0
SYD3_k127_4459609_7 RsbT co-antagonist protein rsbRD N-terminal domain - - - 0.0000000000000000000000008771 115.0
SYD3_k127_4459609_8 Tetratricopeptide repeat - - - 0.0000003668 63.0
SYD3_k127_448154_0 Von Willebrand factor type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006258 543.0
SYD3_k127_4516017_0 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003878 486.0
SYD3_k127_4516017_1 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009613 484.0
SYD3_k127_4516017_2 PFAM periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009565 411.0
SYD3_k127_4516017_3 ABC transporter K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007641 415.0
SYD3_k127_4516017_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 334.0
SYD3_k127_4516017_6 Appr-1'-p processing enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001532 259.0
SYD3_k127_4516017_7 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.00000000000000000000000000000000000000000000001935 177.0
SYD3_k127_452566_0 two component, sigma54 specific, transcriptional regulator, Fis family - - - 1.046e-214 671.0
SYD3_k127_456384_0 peptidyl-tyrosine sulfation - - - 1.519e-225 720.0
SYD3_k127_456384_1 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 585.0
SYD3_k127_456384_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 452.0
SYD3_k127_456384_3 MazG nucleotide pyrophosphohydrolase domain K02499,K04765 - 3.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009727 448.0
SYD3_k127_456384_4 PhoH-like protein K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 289.0
SYD3_k127_456384_6 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000000000000000004053 119.0
SYD3_k127_4578407_0 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003509 581.0
SYD3_k127_4578407_1 lysyltransferase activity K07027,K08256 - 2.4.1.345 0.0000000000000000000000000000000000000004195 153.0
SYD3_k127_4579352_0 Methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000006979 188.0
SYD3_k127_4579352_2 Two component signalling adaptor domain K03408 - - 0.0000000000000000001229 88.0
SYD3_k127_4580353_0 Chromosome Partitioning K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 405.0
SYD3_k127_4580353_1 PHB/PHA accumulation regulator DNA-binding domain - - - 0.0000000000000000000000000000000008238 132.0
SYD3_k127_4596323_0 Glycosyl transferase family 21 - - - 7.866e-247 800.0
SYD3_k127_4596323_1 Outer membrane protein beta-barrel family - - - 1.942e-225 724.0
SYD3_k127_4596323_10 COG1413 FOG HEAT repeat - - - 0.00000000000000000000000000000000000000000000001681 173.0
SYD3_k127_4596323_11 Phosphoglycerate mutase K15634 - 5.4.2.12 0.00000000000000000000000000000000000000000000003627 177.0
SYD3_k127_4596323_14 WavE lipopolysaccharide synthesis - - - 0.00000000000000000000000000000000001296 158.0
SYD3_k127_4596323_15 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000005156 129.0
SYD3_k127_4596323_16 PFAM Rhomboid family protein - - - 0.000000000000000000000000000001079 132.0
SYD3_k127_4596323_17 nucleoside diphosphate kinase K06140 - - 0.000000000000000000000000000001378 141.0
SYD3_k127_4596323_18 Cytochrome P460 - - - 0.0000000000000000000000000232 122.0
SYD3_k127_4596323_19 acyl-coa-binding protein - - - 0.0000000000000000000001177 113.0
SYD3_k127_4596323_2 FtsX-like permease family K02004 - - 4.376e-201 654.0
SYD3_k127_4596323_21 Cytochrome c - - - 0.00000000000000001589 95.0
SYD3_k127_4596323_22 cytochrome - - - 0.0000000000000002916 85.0
SYD3_k127_4596323_23 thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000006136 94.0
SYD3_k127_4596323_24 PAS domain - - - 0.000000000000004311 85.0
SYD3_k127_4596323_25 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.0000000000001835 74.0
SYD3_k127_4596323_26 cheY-homologous receiver domain - - - 0.0000000000002175 77.0
SYD3_k127_4596323_29 Ssu-2 homolog, tandem duplicate 1 - GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0007275,GO:0008150,GO:0009653,GO:0009887,GO:0032501,GO:0032502,GO:0042476,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0048513,GO:0048731,GO:0048856 - 0.000005658 58.0
SYD3_k127_4596323_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 454.0
SYD3_k127_4596323_30 Nitrogen fixation protein NifX K02596 - - 0.00001312 55.0
SYD3_k127_4596323_4 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000418 395.0
SYD3_k127_4596323_5 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 336.0
SYD3_k127_4596323_6 HlyD family secretion protein K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008053 314.0
SYD3_k127_4596323_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K20444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003017 274.0
SYD3_k127_4596323_8 Predicted membrane protein (DUF2254) - - - 0.000000000000000000000000000000000000000000000000000000000000000000007561 251.0
SYD3_k127_4596323_9 UMP catabolic process - - - 0.0000000000000000000000000000000000000000000000000000006148 220.0
SYD3_k127_4597195_0 DEAD DEAH box helicase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 508.0
SYD3_k127_4597195_1 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003115 318.0
SYD3_k127_4597195_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001095 264.0
SYD3_k127_4597195_4 Psort location CytoplasmicMembrane, score - - - 0.000000000000000001153 98.0
SYD3_k127_4597195_5 RF-1 domain K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - 0.0001668 44.0
SYD3_k127_4625466_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 2.566e-302 929.0
SYD3_k127_4625466_1 PFAM NADH Ubiquinone plastoquinone (complex I) K05568 - - 1.299e-202 649.0
SYD3_k127_4625466_10 oxidoreductase, chain 4L K05567 - - 0.0000000000000000000001053 112.0
SYD3_k127_4625466_11 Cation antiporter K05569 - - 0.0000000000000000000002321 102.0
SYD3_k127_4625466_12 Multiple resistance and pH regulation protein F K05570 - - 0.000000000000000003217 97.0
SYD3_k127_4625466_2 Peptidase m28 - - - 3.61e-199 642.0
SYD3_k127_4625466_3 PFAM FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 526.0
SYD3_k127_4625466_4 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter MnhD subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 417.0
SYD3_k127_4625466_5 PFAM sodium calcium exchanger membrane region K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008774 369.0
SYD3_k127_4625466_6 Domain related to MnhB subunit of Na+/H+ antiporter - - - 0.000000000000000000000000000000000000000000000000006378 197.0
SYD3_k127_4625466_7 Domain of unknown function (DUF1992) - - - 0.00000000000000000000000000000000000000000000005348 177.0
SYD3_k127_4625466_8 Dodecin K09165 - - 0.00000000000000000000000005289 111.0
SYD3_k127_4625466_9 PFAM Na H antiporter subunit K05571 - - 0.0000000000000000000000004023 113.0
SYD3_k127_463568_1 ATPase involved in DNA repair K03546 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 437.0
SYD3_k127_463568_2 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 407.0
SYD3_k127_463568_3 Two component, sigma54 specific, transcriptional regulator, Fis family K07712 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008086 256.0
SYD3_k127_463568_4 nuclease activity K07460 - - 0.00000000000000000000000000000000000000000002045 166.0
SYD3_k127_4637009_0 ABC-type branched-chain amino acid transport K07121 - - 3.259e-241 754.0
SYD3_k127_4637009_1 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 414.0
SYD3_k127_4637009_2 SMART helicase c2 K03722 - 3.6.4.12 0.0000001155 56.0
SYD3_k127_4671045_0 PFAM Three-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 7.33e-220 687.0
SYD3_k127_4671045_1 PHP domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003457 402.0
SYD3_k127_4671045_2 PFAM glycosyl transferase family 9 K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 313.0
SYD3_k127_4671045_3 Elongation factor G, domain IV K02355 - - 0.0000000000000000000000000000000000000001315 150.0
SYD3_k127_4677538_0 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 402.0
SYD3_k127_4677538_1 PhoQ Sensor K02660,K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003074 404.0
SYD3_k127_4677538_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 0.00000000000000000000000000001807 117.0
SYD3_k127_4679190_0 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 586.0
SYD3_k127_4679190_1 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 478.0
SYD3_k127_4679190_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006733 283.0
SYD3_k127_4679190_3 CRS1_YhbY K07574 - - 0.0000000000000000000000000000000000000000000000000007566 186.0
SYD3_k127_4679190_4 TIGRFAM hydro-lyase, Fe-S type, tartrate fumarate subfamily, beta subunit K01676,K01678 - 4.2.1.2 0.0000000000000000000000000000000000988 135.0
SYD3_k127_4720222_0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 2.794e-287 923.0
SYD3_k127_4720222_1 Acetyl-coenzyme A transporter 1 K08218 - - 2.372e-258 804.0
SYD3_k127_4720222_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00330 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000001215 236.0
SYD3_k127_4720222_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000005321 200.0
SYD3_k127_4720222_12 DNA polymerase beta thumb K02347 - - 0.000000000000000000000000000000000209 132.0
SYD3_k127_4720222_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 2.865e-211 663.0
SYD3_k127_4720222_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 7.722e-203 639.0
SYD3_k127_4720222_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 587.0
SYD3_k127_4720222_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008735 426.0
SYD3_k127_4720222_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000975 321.0
SYD3_k127_4720222_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 316.0
SYD3_k127_4720222_8 Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 287.0
SYD3_k127_4720222_9 MgtC family K07507 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001656 276.0
SYD3_k127_4720904_0 Protein of unknown function (DUF1015) - - - 1.997e-230 719.0
SYD3_k127_4720904_1 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 606.0
SYD3_k127_4720904_2 RDD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008639 272.0
SYD3_k127_4720904_3 Belongs to the SUA5 family K07566 - 2.7.7.87 0.0000000000000000000000000001038 117.0
SYD3_k127_4720904_5 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000005609 77.0
SYD3_k127_4725352_0 Selenocysteine-specific translation elongation factor K03833 - - 0.0 1028.0
SYD3_k127_4725352_1 response regulator K07713 - - 7.323e-236 738.0
SYD3_k127_4725352_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 2.589e-225 710.0
SYD3_k127_4725352_3 GAF domain - - - 3.25e-224 750.0
SYD3_k127_4725352_4 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007769 528.0
SYD3_k127_4725352_5 Phosphoribosyl transferase domain K07101 - - 0.0000000000000000002872 87.0
SYD3_k127_4727745_0 Signal transduction histidine kinase K13598 - 2.7.13.3 3.408e-222 714.0
SYD3_k127_4727745_1 Surface antigen - - - 2.073e-208 657.0
SYD3_k127_4727745_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K16066 - 1.1.1.381 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 387.0
SYD3_k127_4727745_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.0000000000000000000000000002229 114.0
SYD3_k127_4727745_5 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000001542 72.0
SYD3_k127_4731681_0 PFAM short-chain dehydrogenase reductase SDR K15314 - - 8.082e-279 886.0
SYD3_k127_4731681_1 FIST N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 529.0
SYD3_k127_4731681_2 Adenosine specific kinase K09129 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009045 250.0
SYD3_k127_4731681_3 - - - - 0.00000000000000000000000005545 115.0
SYD3_k127_4731681_5 - - - - 0.0000000000000000002817 92.0
SYD3_k127_4731681_6 4'-phosphopantetheinyl transferase superfamily K06133 - - 0.00000000003934 78.0
SYD3_k127_4768191_0 ABC transporter K15738 - - 0.0 1042.0
SYD3_k127_4768191_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 4.892e-288 897.0
SYD3_k127_4768191_10 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002993 294.0
SYD3_k127_4768191_11 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000005082 265.0
SYD3_k127_4768191_12 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002972 263.0
SYD3_k127_4768191_13 PFAM ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000492 263.0
SYD3_k127_4768191_14 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002915 265.0
SYD3_k127_4768191_15 ABC transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000001587 244.0
SYD3_k127_4768191_16 - - - - 0.00000000000000000000000000000000000000000000000000000000001066 216.0
SYD3_k127_4768191_18 FCD K05799 - - 0.0000000000000000000000000000000000000000000006816 177.0
SYD3_k127_4768191_19 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000000000000000001912 139.0
SYD3_k127_4768191_2 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 2.799e-275 852.0
SYD3_k127_4768191_20 Major Facilitator Superfamily K08177 - - 0.0000000000001669 84.0
SYD3_k127_4768191_3 protein conserved in bacteria K07793 - - 1.457e-208 663.0
SYD3_k127_4768191_4 PFAM Hemerythrin HHE cation binding domain K09155 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 566.0
SYD3_k127_4768191_5 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00169,K19070 GO:0003674,GO:0003824,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016625,GO:0016903,GO:0019752,GO:0033609,GO:0033611,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901575 1.2.7.1,1.2.7.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 549.0
SYD3_k127_4768191_6 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 500.0
SYD3_k127_4768191_7 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00170,K19071 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016625,GO:0016903,GO:0019752,GO:0033609,GO:0033611,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:1901575 1.2.7.1,1.2.7.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 479.0
SYD3_k127_4768191_8 Tripartite tricarboxylate transporter family receptor K07795 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 388.0
SYD3_k127_4768191_9 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00171,K00172,K19072 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016625,GO:0016903,GO:0019752,GO:0033609,GO:0033611,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:1901575 1.2.7.1,1.2.7.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004804 346.0
SYD3_k127_4793299_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 623.0
SYD3_k127_4793299_1 Peptidase C14 caspase catalytic subunit p20 - - - 0.00000000000000000000000000000000000000000000000000000000003187 214.0
SYD3_k127_4808419_0 Aldo/keto reductase family K00002 - 1.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 418.0
SYD3_k127_4808419_1 Nad-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000781 201.0
SYD3_k127_4808419_2 - - - - 0.00001206 47.0
SYD3_k127_4813576_0 copper-translocating P-type ATPase K01533 - 3.6.3.4 0.0 1019.0
SYD3_k127_4813576_1 Transporter K03305 - - 2.219e-256 798.0
SYD3_k127_4813576_12 - - - - 0.00000000000000000000000002973 124.0
SYD3_k127_4813576_13 - - - - 0.0000000000000000000000001681 115.0
SYD3_k127_4813576_15 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.00000000000001031 82.0
SYD3_k127_4813576_18 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00006355 52.0
SYD3_k127_4813576_19 Tetratricopeptide repeat - - - 0.0004521 53.0
SYD3_k127_4813576_2 Voltage gated chloride channel K03281 - - 5.11e-217 690.0
SYD3_k127_4813576_20 Polyketide cyclase / dehydrase and lipid transport - - - 0.0006926 49.0
SYD3_k127_4813576_21 Multicopper oxidase - - - 0.0007289 49.0
SYD3_k127_4813576_3 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003013 579.0
SYD3_k127_4813576_4 Aminotransferase class-III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 533.0
SYD3_k127_4813576_5 Carboxysome Shell Carbonic Anhydrase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004739 505.0
SYD3_k127_4813576_6 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000391 456.0
SYD3_k127_4813576_7 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 313.0
SYD3_k127_4813576_8 PFAM Cytochrome c assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002034 256.0
SYD3_k127_4823116_0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 - 4.1.1.98 3.952e-310 952.0
SYD3_k127_4823116_1 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 2.998e-235 733.0
SYD3_k127_4823116_2 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K11779,K11784,K18285 - 1.21.98.1,2.5.1.120,2.5.1.77 3.589e-227 707.0
SYD3_k127_4823116_3 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 402.0
SYD3_k127_4823116_4 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004519 345.0
SYD3_k127_4823116_6 Belongs to the glycosyl hydrolase 5 (cellulase A) family K19355 - 3.2.1.78 0.00000003676 63.0
SYD3_k127_4825014_0 DNA alkylation repair - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003127 378.0
SYD3_k127_4825014_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001969 267.0
SYD3_k127_4825014_3 domain protein - - - 0.000000000000000000000000000000003042 147.0
SYD3_k127_4826430_0 glycosyl transferase family 2 K21349 - 2.4.1.268 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 584.0
SYD3_k127_4826430_1 PFAM Conserved TM helix repeat-containing protein - - - 0.000173 47.0
SYD3_k127_4832395_0 response regulator K02488 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004979 513.0
SYD3_k127_4832395_1 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 480.0
SYD3_k127_4832395_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 370.0
SYD3_k127_4832395_4 Glutaredoxin K03676 - - 0.000000000000000001125 86.0
SYD3_k127_4840556_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 2.026e-298 949.0
SYD3_k127_4840556_1 PFAM Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 559.0
SYD3_k127_4840556_10 TIGRFAM hydrogenase (NiFe) small subunit (hydA) K06282,K18008 - 1.12.2.1,1.12.99.6 0.00000000000000000000000000000000004398 135.0
SYD3_k127_4840556_2 Diadenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005023 519.0
SYD3_k127_4840556_3 Protein of unknown function (DUF2400) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 435.0
SYD3_k127_4840556_4 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004874 407.0
SYD3_k127_4840556_5 histone H2A K63-linked ubiquitination - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 347.0
SYD3_k127_4840556_6 Forkhead associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 314.0
SYD3_k127_4840556_7 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0000000000000000000000000000000000000000000000000000000000000000000000003531 251.0
SYD3_k127_4840556_8 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000000000000000000000000000000000000000000000000000000000000003357 224.0
SYD3_k127_4840556_9 Thiamine-binding protein - - - 0.00000000000000000000000000000000000000000000008842 171.0
SYD3_k127_4842800_0 Tetratricopeptide repeat - - - 0.0 1663.0
SYD3_k127_4842800_1 repeat protein - - - 0.0 1101.0
SYD3_k127_4842800_10 PilZ domain K02676 - - 0.0000000000000000000000000000000000000000000000000000000000468 207.0
SYD3_k127_4842800_11 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000000000000000000000000000000000000004934 207.0
SYD3_k127_4842800_14 DNA polymerase K02337,K14162 GO:0000731,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0018130,GO:0019438,GO:0019985,GO:0030312,GO:0031668,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0042276,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044464,GO:0046483,GO:0046677,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:1901360,GO:1901362,GO:1901576 2.7.7.7 0.00000000000001465 88.0
SYD3_k127_4842800_2 FHA domain - - - 5.546e-302 939.0
SYD3_k127_4842800_3 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 2.445e-265 834.0
SYD3_k127_4842800_4 Tetratricopeptide repeat - - - 2.471e-217 696.0
SYD3_k127_4842800_5 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 435.0
SYD3_k127_4842800_6 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006756 431.0
SYD3_k127_4842800_7 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 379.0
SYD3_k127_4842800_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 332.0
SYD3_k127_4848449_0 repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 616.0
SYD3_k127_4848449_1 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 484.0
SYD3_k127_4848449_2 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003626 450.0
SYD3_k127_4848449_3 Semialdehyde dehydrogenase, NAD binding domain K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007021 435.0
SYD3_k127_4848449_4 4Fe-4S dicluster domain K18930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008213 361.0
SYD3_k127_4848449_5 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005016 267.0
SYD3_k127_4848449_7 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000000000000000000000000002917 160.0
SYD3_k127_4882766_0 Alcohol dehydrogenase GroES-like domain K00008,K00148,K18369 - 1.1.1.14,1.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000836 599.0
SYD3_k127_4882766_1 Serine dehydratase beta chain K01752 - 4.3.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 561.0
SYD3_k127_4882766_2 TfuA-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006635 464.0
SYD3_k127_4882766_3 YcaO cyclodehydratase, ATP-ad Mg2+-binding K09136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 370.0
SYD3_k127_4882766_4 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000008005 217.0
SYD3_k127_4882766_5 Peptidase dimerisation domain - - - 0.000000000135 74.0
SYD3_k127_4893034_0 PFAM Cytochrome c oxidase, subunit I K04561 - 1.7.2.5 0.0 1300.0
SYD3_k127_4893034_1 transcription factor binding K02584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006043 338.0
SYD3_k127_4893034_2 PFAM Hemerythrin HHE cation binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001002 261.0
SYD3_k127_4893034_3 OmpA family K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001171 260.0
SYD3_k127_4922560_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 457.0
SYD3_k127_4922560_1 Response regulator, receiver K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008059 382.0
SYD3_k127_4928020_0 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 7.456e-289 891.0
SYD3_k127_4928020_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007712 552.0
SYD3_k127_4928020_2 Cytochrome c K15864 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.2.1,1.7.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 515.0
SYD3_k127_4928020_3 Belongs to the Nudix hydrolase family K01515,K03574 - 3.6.1.13,3.6.1.55 0.000000000000000000000000000000000000000000000000000001064 206.0
SYD3_k127_4928020_4 FR47-like protein - - - 0.00000000000000000000000000000000000004032 166.0
SYD3_k127_4928020_5 GIY-YIG catalytic domain K07461 - - 0.00000000000000000000000002234 120.0
SYD3_k127_4928020_6 Histidine kinase A domain protein - - - 0.0000000000000000002876 103.0
SYD3_k127_4928020_7 PFAM Rubrerythrin - - - 0.00000000000001422 78.0
SYD3_k127_4956791_0 Glycosyl transferase family 2 K00786 - - 0.00000000000000000000000000000000000000000000000000000000000000000003915 239.0
SYD3_k127_4956791_1 GTP-binding protein K06207 - - 0.0000000000000000000000000000000000000000000000000000000000000000001364 231.0
SYD3_k127_4970577_0 Insulinase (Peptidase family M16) K07263 - - 0.0 1457.0
SYD3_k127_4970577_1 thiamine diphosphate biosynthetic process K03154 - - 0.00000000000000000000000000000009676 124.0
SYD3_k127_4970577_2 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.00000000000001198 75.0
SYD3_k127_4996418_0 Flavocytochrome c sulphide dehydrogenase, flavin-binding K05301,K17218 - 1.8.2.1,1.8.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004803 507.0
SYD3_k127_4996418_1 auxin efflux carrier K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008041 374.0
SYD3_k127_4996418_2 - - - - 0.000000000000000000000000000000000000000000000004131 190.0
SYD3_k127_4996418_3 cytochrome - - - 0.000000000000000001253 90.0
SYD3_k127_5005673_0 CBS domain containing protein K07182 - - 2.155e-304 942.0
SYD3_k127_5005673_1 DnaJ molecular chaperone homology domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000281 619.0
SYD3_k127_5005673_2 Transporter associated domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003693 593.0
SYD3_k127_5005673_3 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 499.0
SYD3_k127_5005673_4 Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 472.0
SYD3_k127_5005673_5 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008314 408.0
SYD3_k127_5005673_6 Adenylylsulfate kinase K00860 - 2.7.1.25 0.000000000000000000000000000000000000000000000000000000000001003 233.0
SYD3_k127_5005673_7 Response regulator, receiver - - - 0.00000000000000000000000000000000009752 137.0
SYD3_k127_5043379_0 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.0 1029.0
SYD3_k127_5043379_1 Iron-storage protein K02217 - 1.16.3.2 0.000000000000000000000000000000000000000000000000000000000000000000003197 264.0
SYD3_k127_5043379_2 - - - - 0.00000000000000000000000000000000000000000009497 172.0
SYD3_k127_5054868_0 PFAM short-chain dehydrogenase reductase SDR K15314 - - 0.0 2061.0
SYD3_k127_5054868_1 Acyl-CoA dehydrogenase, N-terminal domain - - - 2.189e-228 734.0
SYD3_k127_5077637_0 ATPase domain of DNA mismatch repair MUTS family - - - 8.196e-277 861.0
SYD3_k127_5077637_1 Histidine-specific methyltransferase, SAM-dependent K18911 - 2.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006757 448.0
SYD3_k127_5077637_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 354.0
SYD3_k127_5077637_3 Putative zinc- or iron-chelating domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002243 264.0
SYD3_k127_5077637_4 SEC-C motif K01265 - 3.4.11.18 0.00000000000000000000001692 99.0
SYD3_k127_5120452_0 DNA helicase K03657 - 3.6.4.12 0.0 1114.0
SYD3_k127_5120452_1 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 4.518e-260 806.0
SYD3_k127_5120452_2 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 7.451e-247 766.0
SYD3_k127_5120452_3 adenosine deaminase K01488 - 3.5.4.4 7.493e-198 623.0
SYD3_k127_5120452_4 TIGRFAM para-aminobenzoate synthase, subunit I K01665,K03342 - 2.6.1.85,4.1.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006602 614.0
SYD3_k127_5120452_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 291.0
SYD3_k127_5120452_6 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000004016 254.0
SYD3_k127_5124121_0 short chain dehydrogenase - - - 1.059e-254 800.0
SYD3_k127_5124121_1 Alcohol dehydrogenase GroES-like domain K13979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005849 539.0
SYD3_k127_5124121_2 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 431.0
SYD3_k127_5124121_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002669 296.0
SYD3_k127_5124121_4 - - - - 0.0000000000000000000000000000000000000000000000007151 177.0
SYD3_k127_5124121_5 Protein of unknown function (DUF3014) - - - 0.00000000000000000000000000000000000000000000006588 188.0
SYD3_k127_5126341_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 572.0
SYD3_k127_5126341_1 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 367.0
SYD3_k127_5126341_2 Cation efflux family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008482 362.0
SYD3_k127_5131876_0 oligopeptide transporter - - - 3.086e-294 910.0
SYD3_k127_5131876_1 serine threonine protein kinase K08884,K12132 - 2.7.11.1 8.509e-224 714.0
SYD3_k127_5131876_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000405 498.0
SYD3_k127_5131876_3 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000004282 256.0
SYD3_k127_5131876_4 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000005812 186.0
SYD3_k127_5169300_0 Mitochondrial small ribosomal subunit Rsm22 - - - 1.685e-197 621.0
SYD3_k127_5169300_1 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004527,GO:0004532,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016891,GO:0016893,GO:0016896,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043167,GO:0043169,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0090503,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 531.0
SYD3_k127_5169300_10 response to heat - - - 0.00000000000000000000000000000000001506 146.0
SYD3_k127_5169300_12 Domain of unknown function (DUF427) - - - 0.0000000000000000000000000004679 123.0
SYD3_k127_5169300_13 Peptidase family M3 K01392 - 3.4.24.15 0.000000000000000000007858 91.0
SYD3_k127_5169300_15 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.000000005707 57.0
SYD3_k127_5169300_2 Pyridine nucleotide-disulphide oxidoreductase K00529 - 1.18.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000614 421.0
SYD3_k127_5169300_3 Oxidoreductase NAD-binding domain K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002795 430.0
SYD3_k127_5169300_4 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 407.0
SYD3_k127_5169300_5 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008953 388.0
SYD3_k127_5169300_6 Pirin K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005251 368.0
SYD3_k127_5169300_7 response to heat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000016 252.0
SYD3_k127_5169300_8 PAS domain - - - 0.000000000000000000000000000000000000000000000000944 179.0
SYD3_k127_5169300_9 - - - - 0.0000000000000000000000000000000000000000254 165.0
SYD3_k127_5170922_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 0.000000000000000000000000000000000000000000000002053 191.0
SYD3_k127_5183902_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 574.0
SYD3_k127_5183902_1 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004437 354.0
SYD3_k127_5183902_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007136 291.0
SYD3_k127_5203862_0 PFAM aminotransferase class I and II K00821 - 2.6.1.11,2.6.1.17 6.238e-208 651.0
SYD3_k127_5203862_1 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 486.0
SYD3_k127_5203862_2 succinyl-diaminopimelate desuccinylase K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000126 230.0
SYD3_k127_5203862_3 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00322 - 1.6.1.1 0.00000000000000000000000000000000000000000000000002989 187.0
SYD3_k127_5206632_0 transmembrane signaling receptor activity K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 490.0
SYD3_k127_5309133_0 repeat protein - - - 0.0 1407.0
SYD3_k127_5309133_1 RDD family K18481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003754 365.0
SYD3_k127_5320739_0 denitrification pathway - - - 1.144e-268 840.0
SYD3_k127_5320739_1 carboxypeptidase - - - 1.211e-243 777.0
SYD3_k127_5320739_2 signal-transduction protein containing cAMP-binding and CBS domains K00031,K02342,K14446 - 1.1.1.42,1.3.1.85,2.7.7.7 0.0000000000000000000000000000000000000000000000001885 183.0
SYD3_k127_5322518_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004433 413.0
SYD3_k127_5326067_0 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 - - 0.0 1022.0
SYD3_k127_5326067_1 Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 3.412e-230 720.0
SYD3_k127_5326067_11 Ferredoxin K04755 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0006790,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016043,GO:0016226,GO:0016491,GO:0022607,GO:0022900,GO:0031163,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051540,GO:0055114,GO:0071840 - 0.0000000000000000000000000000000000004951 162.0
SYD3_k127_5326067_12 Fe-S assembly protein IscX - GO:0003674,GO:0004857,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0030234,GO:0031163,GO:0043086,GO:0043167,GO:0043169,GO:0044085,GO:0044092,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050790,GO:0051186,GO:0065007,GO:0065009,GO:0071840,GO:0098772 - 0.00000000000000000000000000009019 117.0
SYD3_k127_5326067_2 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 9.924e-229 713.0
SYD3_k127_5326067_3 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006228 356.0
SYD3_k127_5326067_5 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051604,GO:0071704,GO:0097428,GO:1901564,GO:1902494,GO:1990230,GO:1990234 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 300.0
SYD3_k127_5326067_6 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145,K05829 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 284.0
SYD3_k127_5326067_7 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002763 273.0
SYD3_k127_5326067_9 Is able to transfer iron-sulfur clusters to apo- ferredoxin. Multiple cycles of 2Fe2S cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system K13628 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0009058,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0016530,GO:0018130,GO:0019438,GO:0019538,GO:0022607,GO:0031163,GO:0031974,GO:0033013,GO:0033014,GO:0034641,GO:0034986,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051537,GO:0051540,GO:0051604,GO:0070013,GO:0071704,GO:0071840,GO:0097428,GO:0140104,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000005591 199.0
SYD3_k127_5416909_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0 1170.0
SYD3_k127_5416909_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000008737 107.0
SYD3_k127_5445029_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 1.278e-232 733.0
SYD3_k127_5445029_1 COG1233 Phytoene dehydrogenase and related - - - 2.229e-228 715.0
SYD3_k127_5445029_10 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000002068 241.0
SYD3_k127_5445029_11 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000000007971 119.0
SYD3_k127_5445029_12 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.000000000000000000000171 113.0
SYD3_k127_5445029_2 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 2.129e-205 642.0
SYD3_k127_5445029_3 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism K01488 GO:0003674,GO:0003824,GO:0004000,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006144,GO:0006152,GO:0006154,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009113,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009156,GO:0009161,GO:0009163,GO:0009164,GO:0009165,GO:0009167,GO:0009168,GO:0009987,GO:0015949,GO:0015950,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0019637,GO:0032261,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042278,GO:0042440,GO:0042451,GO:0042454,GO:0042455,GO:0042737,GO:0043094,GO:0043096,GO:0043101,GO:0043103,GO:0043173,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046085,GO:0046100,GO:0046101,GO:0046102,GO:0046103,GO:0046112,GO:0046128,GO:0046129,GO:0046130,GO:0046148,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0072523,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659 3.5.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 607.0
SYD3_k127_5445029_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003476 604.0
SYD3_k127_5445029_5 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005462 586.0
SYD3_k127_5445029_6 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 497.0
SYD3_k127_5445029_7 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K07106 - 4.2.1.126 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005039 362.0
SYD3_k127_5445029_9 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000000000000000000000007156 229.0
SYD3_k127_5450962_0 PFAM Extracellular ligand-binding receptor K01999 - - 6.028e-203 641.0
SYD3_k127_5450962_1 Signal transduction histidine kinase K11711 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 599.0
SYD3_k127_5450962_2 PFAM extracellular solute-binding protein, family 3 K10001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006569 424.0
SYD3_k127_5450962_3 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 429.0
SYD3_k127_5450962_4 Binding-protein-dependent transport system inner membrane component K10003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007231 323.0
SYD3_k127_5450962_5 Binding-protein-dependent transport system inner membrane component K10002 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002134 300.0
SYD3_k127_5450962_6 ABC-type polar amino acid transport system, ATPase component K10004 - - 0.000000000000000000000000000000000000000000000000000000000000000000001913 250.0
SYD3_k127_5450962_7 response regulator K11712 - - 0.00000000000000000000000000000000000000000000000000000000000000000000269 265.0
SYD3_k127_5456432_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1693.0
SYD3_k127_5456432_1 Malonate decarboxylase K13929 - 2.3.1.187 2.267e-284 884.0
SYD3_k127_5456432_10 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway K03707 - 3.5.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000014 278.0
SYD3_k127_5456432_11 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000005375 297.0
SYD3_k127_5456432_12 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004398 282.0
SYD3_k127_5456432_13 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001699 264.0
SYD3_k127_5456432_14 Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase K05966,K13930 - 2.4.2.52 0.0000000000000000000000000000000000000000000000000000000000000000004172 249.0
SYD3_k127_5456432_15 Malonate decarboxylase gamma subunit (MdcE) K13933 - 4.1.1.87 0.00000000000000000000000000000000000000000000000000000000000000005672 243.0
SYD3_k127_5456432_16 Acyl transferase domain K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000003613 231.0
SYD3_k127_5456432_17 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000004749 154.0
SYD3_k127_5456432_18 Transfers 2'-(5-triphosphoribosyl)-3'-dephosphocoenzyme- A to the apo- acyl-carrier-protein of the malonate decarboxylase to yield holo- acyl-carrier-protein K13934 - 2.7.7.66 0.0000000000000000000000000003333 126.0
SYD3_k127_5456432_19 Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism K13931 GO:0000036,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044262,GO:0044281,GO:0044283,GO:0044620,GO:0046394,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0140104,GO:1901576 - 0.00000000000000000000000006561 111.0
SYD3_k127_5456432_2 ABC-type branched-chain amino acid transport K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005015 529.0
SYD3_k127_5456432_20 PEP-CTERM motif - - - 0.0000000000000000000005023 112.0
SYD3_k127_5456432_3 Biotin-lipoyl like K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 509.0
SYD3_k127_5456432_4 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 535.0
SYD3_k127_5456432_5 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000396 398.0
SYD3_k127_5456432_6 Transposase IS200 like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 394.0
SYD3_k127_5456432_7 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 371.0
SYD3_k127_5456432_8 TIGRFAM malonate decarboxylase, beta subunit K01966,K13932,K20510 - 2.1.3.10,2.1.3.15,4.1.1.87,6.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 338.0
SYD3_k127_5456432_9 Von Willebrand factor type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 293.0
SYD3_k127_5458589_0 DEAD DEAH box helicase - - - 0.0 1036.0
SYD3_k127_5458589_1 twitching motility protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000001278 237.0
SYD3_k127_5458589_2 TIGRFAM Methylglyoxal synthase K01734 - 4.2.3.3 0.0000000000000000000000000000000000000000000000000000000000000000005107 240.0
SYD3_k127_5458589_3 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000008097 153.0
SYD3_k127_5458589_4 Glutathione-dependent formaldehyde-activating - - - 0.0000000000000000000000000001195 128.0
SYD3_k127_5463012_0 Mycolic acid cyclopropane synthetase K00574,K20238 - 2.1.1.317,2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008456 583.0
SYD3_k127_5463012_1 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007364 550.0
SYD3_k127_5463012_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 536.0
SYD3_k127_5463012_3 Transcriptional regulator - GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004172 501.0
SYD3_k127_5463012_4 Belongs to the argininosuccinate synthase family. Type K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 412.0
SYD3_k127_5463012_5 NnrS protein K07234 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 349.0
SYD3_k127_5463012_6 Tautomerase enzyme - - - 0.0000000000000000000000000000000000000000000000000001146 194.0
SYD3_k127_5463012_7 - - - - 0.00000000000000000000000000000000003348 141.0
SYD3_k127_5464482_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 4.405e-267 839.0
SYD3_k127_5464482_1 Beta-Casp domain K07576 - - 4.953e-231 721.0
SYD3_k127_5464482_2 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 559.0
SYD3_k127_5464482_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 444.0
SYD3_k127_5464482_4 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003251 274.0
SYD3_k127_5464482_5 Nudix hydrolase K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000004427 237.0
SYD3_k127_5473933_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 2.27e-322 995.0
SYD3_k127_5473933_1 ABC transporter K06147,K06148 - - 2.3e-322 999.0
SYD3_k127_5473933_10 - - - - 0.0000000000000000000000000000000000000000000002807 168.0
SYD3_k127_5473933_2 Transglycosylase SLT domain K08309 - - 1.751e-272 870.0
SYD3_k127_5473933_3 NUBPL iron-transfer P-loop NTPase K04562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009731 516.0
SYD3_k127_5473933_4 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004613 459.0
SYD3_k127_5473933_5 HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 368.0
SYD3_k127_5473933_6 Signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 346.0
SYD3_k127_5473933_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 310.0
SYD3_k127_5473933_8 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 287.0
SYD3_k127_5473933_9 sequence-specific DNA binding - - - 0.0000000000000000000000000000000000000000000000000000000000003041 234.0
SYD3_k127_5475444_0 Protein of unknown function (DUF1722) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007102 496.0
SYD3_k127_5475444_1 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008573 475.0
SYD3_k127_5475444_2 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001836 273.0
SYD3_k127_5475444_3 - - - - 0.0000000000000000000000000000000000000001718 154.0
SYD3_k127_5477439_0 PFAM ATP-binding region ATPase domain protein - - - 9.904e-237 747.0
SYD3_k127_5477439_2 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000000000003285 216.0
SYD3_k127_5477439_3 23S rRNA-intervening sequence protein - - - 0.00000000000000000001591 96.0
SYD3_k127_5477439_4 FG-GAP repeat protein K18197 - 4.2.2.23 0.000000000006382 71.0
SYD3_k127_5489861_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679,K01744 - 4.2.1.2,4.3.1.1 3.612e-250 777.0
SYD3_k127_5489861_1 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007434 479.0
SYD3_k127_5489861_2 Transketolase, pyrimidine binding domain K00162 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004694 436.0
SYD3_k127_5489861_3 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 349.0
SYD3_k127_5489861_5 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001007 269.0
SYD3_k127_5489861_6 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000000000000000000000000000000000000000000000000000000000001534 246.0
SYD3_k127_5503881_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 505.0
SYD3_k127_5503881_1 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002613 259.0
SYD3_k127_5503881_2 VanZ like family - - - 0.00000000000000000000000000000000001608 153.0
SYD3_k127_5503881_3 PFAM Cyclic nucleotide-binding - - - 0.000000000000000000000000000000004606 138.0
SYD3_k127_5507685_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 4.481e-300 928.0
SYD3_k127_5507685_1 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008362 384.0
SYD3_k127_5507685_2 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009197 371.0
SYD3_k127_5507685_3 glycine decarboxylation via glycine cleavage system K02437 - - 0.0000000000000000000000000000000000000000000000000000000000000000572 230.0
SYD3_k127_5507685_5 response regulator K02282 - - 0.000000000000000000000000000000000007221 142.0
SYD3_k127_5507685_7 Phage shock protein A K03969 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000007894 60.0
SYD3_k127_5524167_0 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003958 489.0
SYD3_k127_5524167_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007837 453.0
SYD3_k127_5532775_0 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.0 1148.0
SYD3_k127_5532775_1 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 586.0
SYD3_k127_5532775_12 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.00000000000000000000000000000000000000000000000000000000000000004242 227.0
SYD3_k127_5532775_13 lytic transglycosylase activity - - - 0.000000000000000000000000000000000000000000000000000000000000001562 235.0
SYD3_k127_5532775_14 - - - - 0.000000000000000000000000000000000000000000000000000001638 214.0
SYD3_k127_5532775_16 Helix-turn-helix domain - - - 0.00000000000000000000000000000000006952 139.0
SYD3_k127_5532775_2 DnaJ C terminal domain K03686,K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 505.0
SYD3_k127_5532775_3 PFAM Acetyl-CoA hydrolase transferase K01067,K18118 - 2.8.3.18,3.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 473.0
SYD3_k127_5532775_4 belongs to the carbohydrate kinase PfkB family K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 446.0
SYD3_k127_5532775_5 lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005354 393.0
SYD3_k127_5532775_6 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 359.0
SYD3_k127_5532775_7 TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 347.0
SYD3_k127_5532775_8 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000887 334.0
SYD3_k127_5532775_9 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000002782 276.0
SYD3_k127_5551891_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 602.0
SYD3_k127_5551891_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 337.0
SYD3_k127_5551891_2 cellulose synthase K00694 - 2.4.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004683 324.0
SYD3_k127_5551891_3 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.000001097 62.0
SYD3_k127_5555937_0 Aldehyde oxidase and xanthine dehydrogenase a b hammerhead K03520,K11177 - 1.17.1.4,1.2.5.3 0.0 1327.0
SYD3_k127_5555937_1 PFAM AMP-dependent synthetase and ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 599.0
SYD3_k127_5555937_10 VWA domain containing CoxE-like protein K07161 - - 0.0000000000000000000000000000000000000000000000000000000000000006351 244.0
SYD3_k127_5555937_11 XdhC Rossmann domain K07402 - - 0.000000000000000000000000000000000000000000000000000000006866 214.0
SYD3_k127_5555937_12 Sugar (and other) transporter K07552 - - 0.000000000000000000000000000000000000000000000000008336 202.0
SYD3_k127_5555937_13 - - - - 0.0000000000000000000000000000000000000000000009535 182.0
SYD3_k127_5555937_14 MobA-Related Protein K07141 - 2.7.7.76 0.000000000000000000000000000000000000000000003346 175.0
SYD3_k127_5555937_15 Uncharacterized conserved protein (DUF2277) - - - 0.00000000000000000003685 103.0
SYD3_k127_5555937_16 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000001637 91.0
SYD3_k127_5555937_17 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.00000000000001937 83.0
SYD3_k127_5555937_18 - - - - 0.0002972 50.0
SYD3_k127_5555937_2 Associated with various cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 379.0
SYD3_k127_5555937_3 membrane protein involved in D-alanine export - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 356.0
SYD3_k127_5555937_4 YceI-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 335.0
SYD3_k127_5555937_5 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 324.0
SYD3_k127_5555937_6 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 317.0
SYD3_k127_5555937_7 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000001517 258.0
SYD3_k127_5555937_8 metallochaperone-like domain K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004776 250.0
SYD3_k127_5555937_9 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000004831 252.0
SYD3_k127_5559999_0 Periplasmic binding protein domain K01999 - - 3.16e-218 691.0
SYD3_k127_5559999_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 6.868e-198 647.0
SYD3_k127_5559999_10 SUF system FeS assembly protein K04488 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001381 265.0
SYD3_k127_5559999_11 FeS assembly protein SufB K09014 - - 0.000000000000000000000000000000000000000000000000000002154 190.0
SYD3_k127_5559999_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 523.0
SYD3_k127_5559999_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006483 464.0
SYD3_k127_5559999_4 FeS assembly ATPase SufC K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 439.0
SYD3_k127_5559999_5 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003795 424.0
SYD3_k127_5559999_6 ABC transporter K01996,K11963 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 396.0
SYD3_k127_5559999_7 Enoyl-(Acyl carrier protein) reductase K00019 - 1.1.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 399.0
SYD3_k127_5559999_8 FeS assembly protein SufD K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004416 353.0
SYD3_k127_5559999_9 Iron-sulfur cluster assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001367 292.0
SYD3_k127_5571397_0 Methyltransferase domain - - - 2.523e-264 820.0
SYD3_k127_5571397_1 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 6.765e-240 760.0
SYD3_k127_5571397_10 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006351 333.0
SYD3_k127_5571397_11 PFAM Glycosyl transferase, family 2 K20444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001937 295.0
SYD3_k127_5571397_12 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003115 291.0
SYD3_k127_5571397_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004038 294.0
SYD3_k127_5571397_14 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000007677 239.0
SYD3_k127_5571397_15 glycosyl transferase family 2 K00786 - - 0.00000000000000000000000000000000000000000000000000000002375 225.0
SYD3_k127_5571397_16 Glycosyl transferase - - - 0.0000000000000000000000000000000000000000000000000001202 208.0
SYD3_k127_5571397_17 methyltransferase - - - 0.00000000000000000000000000000000000000000000000001771 199.0
SYD3_k127_5571397_18 - - - - 0.0000000000000000000000000000000000000000008074 160.0
SYD3_k127_5571397_19 Glycosyl transferase, family 2 - - - 0.00000000000000001213 97.0
SYD3_k127_5571397_2 UDP binding domain K00012 - 1.1.1.22 8.296e-238 741.0
SYD3_k127_5571397_20 PIN domain - - - 0.00000000000000008261 88.0
SYD3_k127_5571397_21 PFAM glycosyl transferase family 2 K20444 - - 0.00000000000003068 84.0
SYD3_k127_5571397_22 SpoVT / AbrB like domain - - - 0.0000000000005268 71.0
SYD3_k127_5571397_23 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.0000000101 65.0
SYD3_k127_5571397_4 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 4.539e-198 621.0
SYD3_k127_5571397_5 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 524.0
SYD3_k127_5571397_6 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00066,K02472,K02474,K13015 - 1.1.1.132,1.1.1.136,1.1.1.336 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004606 409.0
SYD3_k127_5571397_7 Succinoglycan biosynthesis protein ExoO K16555 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 381.0
SYD3_k127_5571397_8 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004088 386.0
SYD3_k127_5571397_9 ATP-dependent protease La (LON) substrate-binding domain K01338,K07157 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 326.0
SYD3_k127_5571500_0 N-terminal domain of (some) glycogen debranching enzymes - - - 0.0 1148.0
SYD3_k127_5571500_1 nuclear chromosome segregation K03497 - - 4.098e-242 773.0
SYD3_k127_5571500_2 twitching motility protein K02669 - - 1.243e-216 698.0
SYD3_k127_5571500_3 AAA domain (Cdc48 subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 486.0
SYD3_k127_5571500_4 PilZ domain K02676 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 439.0
SYD3_k127_5571500_5 Diadenosine tetraphosphatase and related serine threonine protein phosphatases K07313 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005555 372.0
SYD3_k127_5571500_6 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000006038 238.0
SYD3_k127_5583171_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 3.475e-202 655.0
SYD3_k127_5583171_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 524.0
SYD3_k127_5583171_2 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006361 455.0
SYD3_k127_5583171_3 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007816 329.0
SYD3_k127_5583171_4 Domain of unknown function (DUF4265) - - - 0.00000000000000000000000000000000000000000000000000000000000000000005807 236.0
SYD3_k127_5583171_5 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.0000000000000000000000000002262 117.0
SYD3_k127_5583171_6 - - - - 0.000004044 51.0
SYD3_k127_5584499_0 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 7.114e-212 664.0
SYD3_k127_5584499_1 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 495.0
SYD3_k127_5584499_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 448.0
SYD3_k127_5584499_3 3-beta hydroxysteroid dehydrogenase/isomerase family K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009625 377.0
SYD3_k127_5584499_4 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 381.0
SYD3_k127_5584499_5 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006811 357.0
SYD3_k127_5584499_6 Lysylphosphatidylglycerol synthase TM region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 353.0
SYD3_k127_559075_0 Penicillin amidase K01434 - 3.5.1.11 0.0 1028.0
SYD3_k127_559075_1 POT family K03305 - - 7.712e-196 623.0
SYD3_k127_559075_2 Glycine cleavage system regulatory protein - - - 0.00000000000000000000000000000000000000000000004578 174.0
SYD3_k127_559075_3 - - - - 0.00000000009101 70.0
SYD3_k127_5591557_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 1.006e-199 650.0
SYD3_k127_5591557_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00615,K00616,K13810 - 2.2.1.1,2.2.1.2,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 570.0
SYD3_k127_5591557_2 TIGRFAM 6-phosphogluconate dehydrogenase (decarboxylating) K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007486 443.0
SYD3_k127_5591557_3 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000001422 225.0
SYD3_k127_5591557_4 - - - - 0.0000000000000000000000000000000000000000000000000001351 191.0
SYD3_k127_5600926_0 AAA ATPase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 333.0
SYD3_k127_5616667_0 signal peptide peptidase SppA, 36K type K04773 - - 1.582e-305 964.0
SYD3_k127_5616667_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.452e-215 683.0
SYD3_k127_5616667_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 546.0
SYD3_k127_5616667_3 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006871 478.0
SYD3_k127_5617441_0 NUBPL iron-transfer P-loop NTPase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 431.0
SYD3_k127_5617441_1 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005272 415.0
SYD3_k127_5617441_2 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008953 273.0
SYD3_k127_5617441_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000001221 112.0
SYD3_k127_5618984_0 TGS domain K06944 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 487.0
SYD3_k127_5618984_1 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002729 340.0
SYD3_k127_5618984_2 NosL - - - 0.000000000000000000000000000000000000000000000000395 196.0
SYD3_k127_5618984_3 Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second- messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a - - - 0.000000000001364 68.0
SYD3_k127_5626695_0 Belongs to the enoyl-CoA hydratase isomerase family K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 1.455e-290 903.0
SYD3_k127_5626695_1 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 1.239e-233 737.0
SYD3_k127_5626695_2 chromosome segregation K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 554.0
SYD3_k127_5626695_3 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006201 450.0
SYD3_k127_5626695_4 hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001016 238.0
SYD3_k127_5635743_0 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005092 497.0
SYD3_k127_5635743_1 Coproporphyrinogen III oxidase K00228 - 1.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005091 417.0
SYD3_k127_5635743_2 Pfam 2OG-Fe(II) oxygenase - - - 0.0000000004359 68.0
SYD3_k127_5640126_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 8.264e-277 855.0
SYD3_k127_5640126_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.227e-203 637.0
SYD3_k127_5640126_2 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 486.0
SYD3_k127_5640126_3 cold-shock protein K03704 - - 0.0000000000000000000000000000000001358 132.0
SYD3_k127_5640126_5 amine dehydrogenase activity - - - 0.00000000000000003235 96.0
SYD3_k127_5640126_6 - - - - 0.00000003291 66.0
SYD3_k127_5640126_7 PFAM glycosyl transferase group 1 K13057 - 2.4.1.245 0.0003484 53.0
SYD3_k127_564770_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1767.0
SYD3_k127_564770_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.0 1019.0
SYD3_k127_564770_10 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000000000000000000000000000000000002687 202.0
SYD3_k127_564770_11 - - - - 0.00000000000000000000000000000000000000000000001059 175.0
SYD3_k127_564770_12 Domain of unknown function (DUF4212) - - - 0.00000000000000000000000000000000000004158 143.0
SYD3_k127_564770_13 TIGRFAM 4-oxalocrotonate tautomerase family enzyme K01821 - 5.3.2.6 0.00000000000000000000000000002966 132.0
SYD3_k127_564770_2 CBS domain containing protein K07182 - - 1.245e-243 767.0
SYD3_k127_564770_3 Spore coat protein CotH K06330 - - 2.821e-241 755.0
SYD3_k127_564770_4 Tripartite tricarboxylate transporter TctA family K07793 - - 5.502e-228 711.0
SYD3_k127_564770_5 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002858 527.0
SYD3_k127_564770_6 Sodium/hydrogen exchanger family K11105 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000273 499.0
SYD3_k127_564770_7 Uncharacterised MFS-type transporter YbfB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006284 366.0
SYD3_k127_564770_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001985 367.0
SYD3_k127_564770_9 EXOIII K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000001928 261.0
SYD3_k127_5650304_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000571 523.0
SYD3_k127_5650304_1 Uncharacterized protein conserved in bacteria (DUF2332) - - - 0.000000000000000000000000000000000000000000000000001236 206.0
SYD3_k127_5650304_2 MafB19-like deaminase K01487 - 3.5.4.3 0.0001525 47.0
SYD3_k127_5653118_0 Putative glutamine amidotransferase - - - 0.0 1184.0
SYD3_k127_5653118_1 DbpA RNA binding domain K03732,K05592 - 3.6.4.13 3.894e-292 910.0
SYD3_k127_5653118_10 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002709 283.0
SYD3_k127_5653118_11 RNA polymerase K03088 - - 0.00000000000000000000000000000000000000001991 159.0
SYD3_k127_5653118_12 Ferredoxin - - - 0.00000000000000000000000000000000000000004898 168.0
SYD3_k127_5653118_14 Bacterial regulatory helix-turn-helix protein, lysR family K04761 - - 0.0000000000000000007206 89.0
SYD3_k127_5653118_15 response regulator K07685 - - 0.0000004722 51.0
SYD3_k127_5653118_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 533.0
SYD3_k127_5653118_3 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005047 482.0
SYD3_k127_5653118_4 Butirosin biosynthesis protein H, N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004189 462.0
SYD3_k127_5653118_5 HAD-hyrolase-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005617 472.0
SYD3_k127_5653118_6 Short-chain dehydrogenase reductase SDR K00059,K00076,K00216,K03366,K13774,K18337 - 1.1.1.100,1.1.1.159,1.1.1.173,1.1.1.304,1.1.1.377,1.1.1.378,1.1.1.76,1.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000642 413.0
SYD3_k127_5653118_7 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008374 413.0
SYD3_k127_5653118_8 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 373.0
SYD3_k127_5653118_9 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007625 326.0
SYD3_k127_5668578_0 Molybdopterin oxidoreductase K00370,K17050 - 1.7.5.1 0.0 1202.0
SYD3_k127_5668578_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K02298 - 1.10.3.10,1.9.3.1 2.82e-316 982.0
SYD3_k127_5668578_10 Predicted membrane protein (DUF2231) - - - 0.000000000000000000000000000000000000000000000000000004492 197.0
SYD3_k127_5668578_11 Acetoacetate decarboxylase (ADC) - - - 0.000000000000000000000000000000000000000000000007977 181.0
SYD3_k127_5668578_12 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.00000000000000000000000000000000000000003544 158.0
SYD3_k127_5668578_13 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000004137 173.0
SYD3_k127_5668578_14 - - - - 0.00000000000000000000000000000000007235 142.0
SYD3_k127_5668578_15 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000000000000000000000000008255 136.0
SYD3_k127_5668578_16 thiosulfate sulfurtransferase activity K01011,K21028 - 2.8.1.1,2.8.1.11,2.8.1.2 0.0000000000000000000000000000001434 132.0
SYD3_k127_5668578_17 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.000000000000000000000000003617 116.0
SYD3_k127_5668578_19 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.00000000000000006889 81.0
SYD3_k127_5668578_2 Cytochrome C oxidase subunit II, transmembrane domain K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008578 513.0
SYD3_k127_5668578_3 4Fe-4S dicluster domain K00371,K17051 - 1.7.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004439 524.0
SYD3_k127_5668578_4 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 400.0
SYD3_k127_5668578_5 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009157 393.0
SYD3_k127_5668578_6 thiosulfate sulfurtransferase activity K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 336.0
SYD3_k127_5668578_7 - K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 315.0
SYD3_k127_5668578_8 Cytochrome c K17052 - - 0.0000000000000000000000000000000000000000000000000000000000000005927 246.0
SYD3_k127_5668578_9 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000001459 202.0
SYD3_k127_5680147_0 Glycosyl hydrolases family 15 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005647 606.0
SYD3_k127_5680147_1 rhodanese-related sulfurtransferase - - - 0.0000000000000000000000000000000000126 145.0
SYD3_k127_5680147_2 Small multidrug resistance protein K11741 - - 0.000000000000000000000000000000164 126.0
SYD3_k127_5680147_3 Protein of unknown function DUF72 - - - 0.0004827 43.0
SYD3_k127_5681100_0 Fumarate reductase, iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000567 169.0
SYD3_k127_5681100_1 Domain of unknown function (DUF4262) - - - 0.000000000000000000000000000001105 122.0
SYD3_k127_5704749_0 HAMP domain - - - 3.866e-211 664.0
SYD3_k127_5704749_1 PFAM Xanthine uracil vitamin C permease K02824 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004405 537.0
SYD3_k127_5704749_2 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 505.0
SYD3_k127_5704749_3 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000002019 274.0
SYD3_k127_5704749_4 Belongs to the P(II) protein family K04751 - - 0.00000000000000000805 83.0
SYD3_k127_5744261_0 CoA binding domain K09181 - - 1.146e-309 974.0
SYD3_k127_5744261_1 Indolepyruvate ferredoxin oxidoreductase K00179,K04090 - 1.2.7.8 8.696e-259 807.0
SYD3_k127_5744261_2 Acyl-CoA dehydrogenase, middle domain K00252 - 1.3.8.6 2.152e-199 634.0
SYD3_k127_5744261_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07538 - 1.1.1.368 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007879 537.0
SYD3_k127_5744261_4 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004003 553.0
SYD3_k127_5744261_5 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00180 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000001727 229.0
SYD3_k127_5744261_6 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000000000000000000000000007593 192.0
SYD3_k127_5744261_7 transcriptional regulator - - - 0.000000000000000000000000000000000000000000005266 175.0
SYD3_k127_5744261_9 Acetyltransferase (GNAT) family - - - 0.0009604 53.0
SYD3_k127_5764009_0 CoA-substrate-specific enzyme activase - - - 0.0 1023.0
SYD3_k127_5792699_0 PFAM Peptidase C1A, papain C-terminal - - - 0.0000000000000000149 98.0
SYD3_k127_5794550_0 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 448.0
SYD3_k127_579595_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 1.143e-263 839.0
SYD3_k127_579595_1 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 605.0
SYD3_k127_5808185_0 Protein of unknown function (DUF1015) - - - 1.126e-223 697.0
SYD3_k127_581240_0 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 507.0
SYD3_k127_581240_1 Involved in the tonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000007947 234.0
SYD3_k127_581240_2 Acyl-protein synthetase, LuxE - - - 0.000000000000000000001316 95.0
SYD3_k127_5823943_0 CoA-binding domain protein K09181 - - 3.675e-318 993.0
SYD3_k127_5823943_1 acyl-CoA dehydrogenase K09456,K20035 - - 9.847e-309 956.0
SYD3_k127_5823943_2 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 1.811e-215 670.0
SYD3_k127_5823943_3 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007069 527.0
SYD3_k127_5823943_4 filamentation induced by cAMP protein Fic - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001264 281.0
SYD3_k127_5823943_5 - - - - 0.000000000000000000000000000002231 124.0
SYD3_k127_5854861_0 serine threonine protein kinase K12132 - 2.7.11.1 1.168e-205 677.0
SYD3_k127_5854861_1 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 594.0
SYD3_k127_5854861_10 DNA-templated transcription, initiation K03088,K11333 - 1.3.7.14,1.3.7.15 0.00000000000000000000000000000000000000000000000000001301 211.0
SYD3_k127_5854861_11 GDP-mannose mannosyl hydrolase activity K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000293 196.0
SYD3_k127_5854861_12 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000002438 139.0
SYD3_k127_5854861_13 Redoxin K03564 - 1.11.1.15 0.00000000000000000000003688 102.0
SYD3_k127_5854861_2 Belongs to the N(4) N(6)-methyltransferase family K00571 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 521.0
SYD3_k127_5854861_3 Domain of unknown function (DUF1730) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 502.0
SYD3_k127_5854861_4 CarD-like/TRCF domain K07736 GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009405,GO:0009605,GO:0009987,GO:0009991,GO:0015968,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0040007,GO:0042594,GO:0044419,GO:0050896,GO:0051704,GO:0051716,GO:0071496 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 424.0
SYD3_k127_5854861_5 Belongs to the GcvT family K06980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 381.0
SYD3_k127_5854861_6 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007427 345.0
SYD3_k127_5854861_7 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005806 327.0
SYD3_k127_5854861_8 PFAM Asparaginase K01424 - 3.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000004756 266.0
SYD3_k127_5854861_9 metallopeptidase activity K06974 - - 0.000000000000000000000000000000000000000000000000000000000000000003552 233.0
SYD3_k127_5880330_0 MMPL family K07003 - - 0.0 1147.0
SYD3_k127_5880330_1 synthase K01858 - 5.5.1.4 9.383e-237 737.0
SYD3_k127_5880330_2 ABC transporter K02017 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 447.0
SYD3_k127_5880330_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004525 281.0
SYD3_k127_5880330_4 Molybdate ABC transporter K02018 - - 0.000000000000000000000000000000000000000000000000000000000008312 212.0
SYD3_k127_5880330_5 Response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000001415 213.0
SYD3_k127_5880330_6 - - - - 0.000000000000000000000000000000000000001841 157.0
SYD3_k127_5881944_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 7.584e-219 684.0
SYD3_k127_5881944_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 392.0
SYD3_k127_5881944_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000000000000004151 173.0
SYD3_k127_5881944_3 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000137 167.0
SYD3_k127_5893331_0 Belongs to the HypD family K04654 - - 8.107e-199 646.0
SYD3_k127_5893331_1 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006872 485.0
SYD3_k127_5893331_2 hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000008478 225.0
SYD3_k127_5893331_3 carbon dioxide binding K04653,K04654 - - 0.000000000000000000000000000000000000000000000001501 174.0
SYD3_k127_5898975_0 protein methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 351.0
SYD3_k127_5923462_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 428.0
SYD3_k127_5923462_1 endonuclease activity K07451 - - 0.00000000000000000000000000000000000000000000000000000000000000000006133 241.0
SYD3_k127_5953959_0 Fibronectin type 3 domain K21571 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005571 454.0
SYD3_k127_5953959_1 PFAM Glutamine amidotransferase, class-II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009005 392.0
SYD3_k127_5953959_2 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 304.0
SYD3_k127_5953959_3 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000004877 225.0
SYD3_k127_5953959_5 COG3209 Rhs family protein - - - 0.0000000145 69.0
SYD3_k127_5960826_0 Multicopper oxidase K00368,K22348 - 1.16.3.3,1.7.2.1 1.202e-210 668.0
SYD3_k127_5960826_1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 529.0
SYD3_k127_5960826_2 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 358.0
SYD3_k127_5960826_3 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00000000000000000000000000000000000000000003447 167.0
SYD3_k127_5984663_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 0.0 1102.0
SYD3_k127_5984663_1 PFAM Major Facilitator Superfamily K08177 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000135 276.0
SYD3_k127_5984663_2 PKD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007611 287.0
SYD3_k127_5984663_3 Rubrerythrin - - - 0.0000000000000000000000000004727 122.0
SYD3_k127_6029213_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 4.544e-302 953.0
SYD3_k127_6029213_1 choline dehydrogenase activity - - - 2.499e-268 833.0
SYD3_k127_6029213_2 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 477.0
SYD3_k127_6029213_3 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004891 373.0
SYD3_k127_6029213_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 315.0
SYD3_k127_6029213_5 2OG-Fe(II) oxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 292.0
SYD3_k127_6029213_6 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000005261 251.0
SYD3_k127_6029213_8 Transmembrane anti-sigma factor - - - 0.00000000000000000000000000005032 129.0
SYD3_k127_6029213_9 Diacylglycerol kinase catalytic domain (presumed) - - - 0.00000000000000000000004513 101.0
SYD3_k127_6059031_0 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000000000000000000000000000000000000000000000000000001152 199.0
SYD3_k127_6059031_1 DNA topoisomerase VI subunit A K03166 - 5.99.1.3 0.0000000000000000005432 86.0
SYD3_k127_60758_0 Aldehyde dehydrogenase family - - - 2.131e-208 657.0
SYD3_k127_60758_1 ABC transporter transmembrane region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 537.0
SYD3_k127_60758_2 Quinohemoprotein amine dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000562 400.0
SYD3_k127_60758_3 Peptidase family U32 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 360.0
SYD3_k127_60758_4 peptidase U32 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001509 255.0
SYD3_k127_60758_5 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000004106 223.0
SYD3_k127_60758_6 Quinohemoprotein amine dehydrogenase, gamma subunit - - - 0.00000000000000000000000000000000000000000009225 181.0
SYD3_k127_60758_7 Radical SAM superfamily K06871 - - 0.0000000000000002114 79.0
SYD3_k127_6077918_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003501 333.0
SYD3_k127_6077918_1 TRAP transporter T-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000942 316.0
SYD3_k127_6077918_2 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005492 319.0
SYD3_k127_6077918_3 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002328 290.0
SYD3_k127_6077918_4 Biopolymer transport protein K03559 - - 0.00000000000000000000000000000000000000000000000000000000002455 220.0
SYD3_k127_6077918_5 endonuclease activity K07451 - - 0.0000000000000000000000000000000000000000000000000006868 188.0
SYD3_k127_6077918_6 endonuclease activity K07451 - - 0.000000000000000000000000001465 117.0
SYD3_k127_609818_0 glycosyl transferase family K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.0 1055.0
SYD3_k127_609818_1 Alcohol dehydrogenase GroES-like domain K00008,K00148,K18369 - 1.1.1.14,1.2.1.46 3.244e-234 730.0
SYD3_k127_609818_2 Transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006686 414.0
SYD3_k127_609818_3 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004716 360.0
SYD3_k127_609818_4 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 309.0
SYD3_k127_609818_5 glycolate biosynthetic process K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007108 286.0
SYD3_k127_609818_6 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000001073 194.0
SYD3_k127_609818_7 Protein of unknown function (DUF2721) - - - 0.00000000000000000000004845 116.0
SYD3_k127_609818_8 Putative zinc- or iron-chelating domain - - - 0.00000000000006134 78.0
SYD3_k127_6102350_0 4Fe-4S dicluster domain - - - 4.233e-282 882.0
SYD3_k127_6102350_1 Nucleic acid binding OB-fold tRNA helicase-type K03698 - - 1.155e-226 713.0
SYD3_k127_6102350_10 IMP dehydrogenase activity K06041,K11527 - 2.7.13.3,5.3.1.13 0.000000000000000000000000000000001048 142.0
SYD3_k127_6102350_11 Electron transfer flavoprotein K03522 - - 0.00000000000000000000000173 102.0
SYD3_k127_6102350_2 TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 428.0
SYD3_k127_6102350_3 Phosphoserine phosphatase K15781,K21830 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0071944 2.3.1.51,3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 440.0
SYD3_k127_6102350_4 response regulator K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 368.0
SYD3_k127_6102350_5 Isochorismatase family K08281 - 3.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008726 336.0
SYD3_k127_6102350_6 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007527 329.0
SYD3_k127_6102350_7 N-terminal domain of galactosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000004552 247.0
SYD3_k127_6102350_8 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000002371 209.0
SYD3_k127_6102350_9 zinc ion binding K06204 - - 0.00000000000000000000000000000000000000000000006778 177.0
SYD3_k127_6122105_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0 1575.0
SYD3_k127_6122105_1 glutamate--cysteine ligase K01919 - 6.3.2.2 5.811e-239 746.0
SYD3_k127_6122105_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 578.0
SYD3_k127_6122105_3 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 312.0
SYD3_k127_6122105_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 325.0
SYD3_k127_6122105_5 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000002462 234.0
SYD3_k127_6122105_6 Oxygen tolerance - - - 0.00000000000000000000000000000000000000000000000000000000005255 232.0
SYD3_k127_6122105_7 Tetratricopeptide repeat - - - 0.00000000007523 75.0
SYD3_k127_6122105_8 Tetratricopeptide repeat - - - 0.0005214 50.0
SYD3_k127_612694_0 SMART Elongator protein 3 MiaB NifB - - - 0.0 1487.0
SYD3_k127_612694_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.0 1086.0
SYD3_k127_612694_2 Ribonuclease E/G family K08301 - - 3.549e-206 696.0
SYD3_k127_612694_3 acylphosphatase activity K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.000000000000000000000000000000000002085 139.0
SYD3_k127_6129550_0 MgtC family K07507 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000843 341.0
SYD3_k127_6129550_1 Uncharacterized protein family UPF0016 - - - 0.00000000000000000000000000002343 121.0
SYD3_k127_6173872_0 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0 1527.0
SYD3_k127_6173872_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 2.896e-292 912.0
SYD3_k127_6173872_2 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005216 332.0
SYD3_k127_6173872_3 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000000000000000000000000000000000000000003878 237.0
SYD3_k127_6173872_4 AntiSigma factor K03088 - - 0.00000000000000000000000005705 116.0
SYD3_k127_6178520_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1386.0
SYD3_k127_6178520_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008953 254.0
SYD3_k127_6178520_2 PFAM NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000000000001556 224.0
SYD3_k127_6195338_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.0 1004.0
SYD3_k127_6195338_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 4.261e-215 686.0
SYD3_k127_6195338_10 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000000000000000000000005547 249.0
SYD3_k127_6195338_12 Transglycosylase associated protein - - - 0.0000000000000000000000000000000004105 138.0
SYD3_k127_6195338_14 Recombinase zinc beta ribbon domain - - - 0.0001505 51.0
SYD3_k127_6195338_2 Belongs to the ompA family K03286 - - 2.03e-205 653.0
SYD3_k127_6195338_3 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0016070,GO:0016853,GO:0016866,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006101 568.0
SYD3_k127_6195338_4 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000808 537.0
SYD3_k127_6195338_5 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 531.0
SYD3_k127_6195338_6 Serine Threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007753 413.0
SYD3_k127_6195338_7 TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 327.0
SYD3_k127_6195338_8 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 338.0
SYD3_k127_6195338_9 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000141 287.0
SYD3_k127_620072_0 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 531.0
SYD3_k127_620072_1 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 488.0
SYD3_k127_6243440_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 7.4e-323 994.0
SYD3_k127_6243440_1 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 383.0
SYD3_k127_6243440_2 endonuclease activity K07451 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 344.0
SYD3_k127_6243440_4 Protein of unknown function (DUF3015) - - - 0.0000000000000000000000000000000000000000000000001617 203.0
SYD3_k127_6243440_5 TonB C terminal K03832 - - 0.00000000000000000000000000000002702 140.0
SYD3_k127_6243440_6 Small hydrophilic plant seed protein - - - 0.000000000000000000000001056 106.0
SYD3_k127_6243440_7 endonuclease activity K07451 - - 0.0000001945 58.0
SYD3_k127_6243440_8 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.0004736 42.0
SYD3_k127_6261557_0 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009282 251.0
SYD3_k127_630540_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 407.0
SYD3_k127_630540_1 cysteine-type peptidase activity K21471,K21473,K21687 - - 0.000000000000000000000000000000000000000000000000000000000000000000004694 241.0
SYD3_k127_630540_2 Domain of unknown function (DUF2760) - - - 0.00000000001591 74.0
SYD3_k127_6335413_0 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 0.0 1058.0
SYD3_k127_6335413_1 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 7.948e-197 636.0
SYD3_k127_6335413_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 441.0
SYD3_k127_6335413_3 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001775 259.0
SYD3_k127_6335413_4 uridine kinase K00876 - 2.7.1.48 0.000000000000000001321 89.0
SYD3_k127_6349022_0 ATP-binding region ATPase domain protein K03407,K13490 - 2.7.13.3 3.895e-245 761.0
SYD3_k127_636546_0 Periplasmic protein TonB links inner and outer membranes - - - 0.0 1146.0
SYD3_k127_636546_1 MlaD protein K02067 - - 6.562e-214 678.0
SYD3_k127_636546_2 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 434.0
SYD3_k127_636546_3 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 408.0
SYD3_k127_636546_4 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015,K15893 - 1.1.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 300.0
SYD3_k127_636546_6 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.000000000000000000000000000000000000000000000000000000000001344 239.0
SYD3_k127_636546_7 - - - - 0.000000000000000000000000000000000000000000000000001983 188.0
SYD3_k127_636546_8 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.000000000000000000000004144 102.0
SYD3_k127_6395968_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 9.716e-250 776.0
SYD3_k127_6395968_1 Thiolase, C-terminal domain K00626,K07508 - 2.3.1.16,2.3.1.9 3.89e-200 629.0
SYD3_k127_6395968_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004792 381.0
SYD3_k127_6395968_3 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005259 328.0
SYD3_k127_6395968_4 proteolysis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001023 293.0
SYD3_k127_6395968_5 Ubiquinol-cytochrome C reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005897 256.0
SYD3_k127_6395968_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03117 - - 0.0000000000000000000000000000000000544 146.0
SYD3_k127_6433461_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 425.0
SYD3_k127_6441624_0 endonuclease activity K07451 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004759 258.0
SYD3_k127_6441624_1 PFAM binding-protein-dependent transport systems inner membrane component K11074 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015846,GO:0015847,GO:0016020,GO:0016021,GO:0031224,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.000000002293 63.0
SYD3_k127_6466203_0 Arsenical pump membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000375 429.0
SYD3_k127_6466203_1 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002828 438.0
SYD3_k127_6466203_2 Transposase IS200 like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003741 387.0
SYD3_k127_6466203_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 319.0
SYD3_k127_648500_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 8.408e-208 658.0
SYD3_k127_648500_1 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000000000000000002461 153.0
SYD3_k127_6613683_0 Acetyl-CoA hydrolase/transferase N-terminal domain - - - 1.228e-237 745.0
SYD3_k127_6613683_1 DNA polymerase LigD polymerase domain K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004935 479.0
SYD3_k127_6613683_10 Response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000002661 186.0
SYD3_k127_6613683_11 - - - - 0.000000000000000000000000000000000000009513 149.0
SYD3_k127_6613683_13 antisigma factor binding K02066,K02660,K04749,K04757,K05946,K06378 - 2.4.1.187,2.7.11.1 0.0000000000000000000000003762 121.0
SYD3_k127_6613683_14 - - - - 0.0000000000000000000000008936 120.0
SYD3_k127_6613683_15 nuclear chromosome segregation - - - 0.0000000000003606 74.0
SYD3_k127_6613683_2 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 491.0
SYD3_k127_6613683_3 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008356 441.0
SYD3_k127_6613683_4 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 407.0
SYD3_k127_6613683_5 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 392.0
SYD3_k127_6613683_6 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006305 343.0
SYD3_k127_6613683_7 Protein of unknown function (DUF541) K09807 - - 0.00000000000000000000000000000000000000000000000000000000000000000001955 241.0
SYD3_k127_6613683_8 Domain of unknown function (DUF2382) - - - 0.000000000000000000000000000000000000000000000000001487 196.0
SYD3_k127_6640049_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 3.334e-320 987.0
SYD3_k127_6640049_1 DnaJ molecular chaperone homology domain - - - 2.409e-197 669.0
SYD3_k127_6640049_2 Outer membrane usher protein K07347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 583.0
SYD3_k127_6640049_3 Ribonuclease H K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 405.0
SYD3_k127_6640049_4 C4-type zinc ribbon domain K07164 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 343.0
SYD3_k127_6640049_5 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005035 291.0
SYD3_k127_6640049_6 pilus organization K07346 - - 0.0000000000000000000000000000000000000000000003989 182.0
SYD3_k127_6640049_7 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000001622 123.0
SYD3_k127_6640049_8 Spore Coat Protein - - - 0.000000000005499 77.0
SYD3_k127_6651846_0 HflC and HflK could regulate a protease K04087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004424 449.0
SYD3_k127_6651846_1 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000009876 186.0
SYD3_k127_6673410_0 NADH dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000685 499.0
SYD3_k127_6673410_1 hydrogenase 4 membrane K12140 - - 0.000000000000000000000000000000000000000000000000000000000000000007354 243.0
SYD3_k127_66830_0 Oligoendopeptidase f - - - 0.0 1051.0
SYD3_k127_66830_1 Cys Met metabolism K01739,K01758,K01761 - 2.5.1.48,4.4.1.1,4.4.1.11 7.293e-215 674.0
SYD3_k127_66830_2 Fungal trichothecene efflux pump (TRI12) - - - 4.368e-204 646.0
SYD3_k127_66830_3 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 547.0
SYD3_k127_66830_4 Pyridoxal-phosphate dependent enzyme K01697 - 4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 297.0
SYD3_k127_66830_5 methyltransferase K00563 - 2.1.1.187 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006781 298.0
SYD3_k127_66830_6 Protein of unknown function (DUF2892) - - - 0.0000000000000000000000005457 122.0
SYD3_k127_6686918_0 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004152 391.0
SYD3_k127_6686918_1 Carbon-nitrogen hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 368.0
SYD3_k127_6686918_2 integral membrane protein K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003006 304.0
SYD3_k127_66917_0 PFAM sigma-54 factor interaction domain-containing protein K02688 - - 2.043e-307 950.0
SYD3_k127_66917_1 Aminotransferase class I and II K11358 - 2.6.1.1 2.368e-197 623.0
SYD3_k127_66917_2 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006785 428.0
SYD3_k127_66917_3 Diguanylate cyclase - - - 0.0000000000000000000000000003452 132.0
SYD3_k127_6706982_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620,K00930 - 2.3.1.1,2.3.1.35,2.7.2.8 0.0 1184.0
SYD3_k127_6706982_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145,K05829 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 295.0
SYD3_k127_6706982_2 Regulates arginine biosynthesis genes K03402 - - 0.00000000000000000000000000000000000000008237 174.0
SYD3_k127_6734984_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0 1088.0
SYD3_k127_6734984_1 PFAM Pyridoxal-dependent decarboxylase K01593 - 4.1.1.105,4.1.1.28 9.884e-235 777.0
SYD3_k127_6734984_10 Mitochondrial biogenesis AIM24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004551 409.0
SYD3_k127_6734984_11 Belongs to the MenA family. Type 1 subfamily K02548 GO:0000287,GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006766,GO:0006775,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009233,GO:0009234,GO:0009987,GO:0016020,GO:0016740,GO:0016765,GO:0032194,GO:0042180,GO:0042181,GO:0042362,GO:0042371,GO:0042373,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046428,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901576,GO:1901661,GO:1901663 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007313 372.0
SYD3_k127_6734984_12 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 304.0
SYD3_k127_6734984_13 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005181 311.0
SYD3_k127_6734984_14 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005235 270.0
SYD3_k127_6734984_15 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006044 244.0
SYD3_k127_6734984_16 PFAM CBS domain containing protein K04767 - - 0.0000000000000000000000000000000000000000000000000000000000000005265 228.0
SYD3_k127_6734984_17 Belongs to the binding-protein-dependent transport system permease family K01997,K01999 - - 0.00000000000000000000000000000000000000000000000000000001116 199.0
SYD3_k127_6734984_18 Histidine kinase K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000002304 215.0
SYD3_k127_6734984_19 Leucine-rich repeat (LRR) protein - - - 0.0000000000000000000000000000000000000000000000000000001167 226.0
SYD3_k127_6734984_2 Protein of unknown function (DUF1302) - - - 3.766e-216 688.0
SYD3_k127_6734984_20 Leucine-rich repeat (LRR) protein - - - 0.0000000000000000000000000000000000000000000000000001122 216.0
SYD3_k127_6734984_21 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.0000000000000000000000000000000000000000000000000001793 186.0
SYD3_k127_6734984_22 Carbon monoxide dehydrogenase subunit G (CoxG) - - - 0.00000000000000000000000000000000000000000000000000202 188.0
SYD3_k127_6734984_23 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000001424 160.0
SYD3_k127_6734984_24 Universal stress protein - - - 0.000000000000000000000000000000000000005001 168.0
SYD3_k127_6734984_25 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000000000000000001574 147.0
SYD3_k127_6734984_26 LamG domain protein jellyroll fold domain protein - - - 0.00000000000000000000000000000000001227 150.0
SYD3_k127_6734984_27 FxsA cytoplasmic membrane protein K07113 - - 0.0000000000000000000000000000000002192 139.0
SYD3_k127_6734984_28 PFAM helix-turn-helix domain protein - - - 0.00000000000000000000000000002667 123.0
SYD3_k127_6734984_29 universal stress protein - - - 0.00000000000000000000000004153 120.0
SYD3_k127_6734984_3 PFAM V-type ATPase 116 kDa K02123 - - 9.084e-211 672.0
SYD3_k127_6734984_4 ATP-grasp domain - - - 2.963e-205 645.0
SYD3_k127_6734984_5 Elongator protein 3, MiaB family, Radical SAM - - - 3.653e-205 646.0
SYD3_k127_6734984_6 PFAM Acyl-CoA dehydrogenase, C-terminal domain - - - 5.146e-201 642.0
SYD3_k127_6734984_7 MoeA C-terminal region (domain IV) K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 571.0
SYD3_k127_6734984_8 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 543.0
SYD3_k127_6734984_9 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 406.0
SYD3_k127_673509_0 acyl-CoA dehydrogenase activity K00249 - 1.3.8.7 0.0 1276.0
SYD3_k127_673509_1 Electron transfer flavoprotein-ubiquinone K00311 - 1.5.5.1 2.045e-317 981.0
SYD3_k127_673509_2 PFAM Hemerythrin HHE cation binding domain K09155 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005304 551.0
SYD3_k127_673509_3 PFAM Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 455.0
SYD3_k127_673509_4 exodeoxyribonuclease III K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 411.0
SYD3_k127_673509_5 fatty acid beta-oxidation using acyl-CoA dehydrogenase K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003368 446.0
SYD3_k127_673509_6 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000001681 196.0
SYD3_k127_673509_7 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP - - - 0.000000000000000000000000000004185 136.0
SYD3_k127_673509_8 Cupin domain - - - 0.00000000000000000000000000008032 120.0
SYD3_k127_6736342_0 ammonium transporter K03320 - - 2.948e-241 757.0
SYD3_k127_6736342_1 Sodium/hydrogen exchanger family K11105 - - 3.989e-216 680.0
SYD3_k127_6736342_2 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005877 543.0
SYD3_k127_6736342_3 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 432.0
SYD3_k127_6736342_4 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000942 347.0
SYD3_k127_6736342_5 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000002757 137.0
SYD3_k127_6773500_0 MMPL family K07003 - - 5.051e-308 981.0
SYD3_k127_6773500_1 Uncharacterised MFS-type transporter YbfB K05548,K05819,K08195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 488.0
SYD3_k127_6773500_2 protein related to plant photosystem II stability assembly factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004786 321.0
SYD3_k127_6773500_3 Protein of unknown function (DUF1329) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002431 239.0
SYD3_k127_6773500_4 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000003847 141.0
SYD3_k127_6813711_0 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005521 465.0
SYD3_k127_6813711_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 438.0
SYD3_k127_6813711_2 PFAM ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 296.0
SYD3_k127_6813711_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003178 310.0
SYD3_k127_6813711_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000003164 223.0
SYD3_k127_6813711_5 4-Oxalocrotonate Tautomerase - - - 0.000000000000000000000000000000000000000000000002361 178.0
SYD3_k127_6813711_6 NosL - - - 0.00000000000000000000000000000000000000000005628 163.0
SYD3_k127_6813711_7 - - - - 0.0000000000000000000000101 108.0
SYD3_k127_6823557_0 Aldehyde dehydrogenase family K00129 - 1.2.1.5 1.557e-231 729.0
SYD3_k127_6823557_1 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006366 397.0
SYD3_k127_6823557_2 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 372.0
SYD3_k127_6823557_3 histone H2A K63-linked ubiquitination - - - 0.000000000000000000000000000000000000000000000000009938 185.0
SYD3_k127_6835135_0 Histidine kinase A domain protein - - - 0.0 1326.0
SYD3_k127_6835135_1 CBS domain containing protein K07182 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006527 598.0
SYD3_k127_6835135_2 PFAM FecR protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000195 257.0
SYD3_k127_6835135_3 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000001667 181.0
SYD3_k127_6835135_4 galactose-1-phosphate uridylyltransferase - - - 0.0000000000000000000000000000000000006413 154.0
SYD3_k127_6835135_5 Fibronectin type 3 domain - - - 0.00000000000000000000000000000000001395 151.0
SYD3_k127_6835135_7 arylsulfatase activity - - - 0.0000000000000000003281 97.0
SYD3_k127_6840642_0 Indolepyruvate ferredoxin oxidoreductase K00179,K04090 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 557.0
SYD3_k127_6840642_1 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00180 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000005104 249.0
SYD3_k127_6846965_0 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005919 565.0
SYD3_k127_6846965_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005872 281.0
SYD3_k127_6846965_2 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000006417 137.0
SYD3_k127_6847204_0 Histidine kinase K07711,K19694 - 2.7.13.3 0.0 1323.0
SYD3_k127_6847204_1 Aminotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004123 419.0
SYD3_k127_6847204_2 Peptidase C14, caspase catalytic - - - 0.0000000000000000000000000000000000000000000000000000000000001862 242.0
SYD3_k127_6847204_3 PFAM regulator of chromosome condensation, RCC1 - - - 0.0000000000000000000000000000000000000000000001299 185.0
SYD3_k127_6847908_0 PFAM Cytochrome c oxidase, subunit I K04561 - 1.7.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005485 554.0
SYD3_k127_6847908_1 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002817 243.0
SYD3_k127_6847908_2 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000005424 84.0
SYD3_k127_6849313_0 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009371 420.0
SYD3_k127_6849313_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000006528 261.0
SYD3_k127_6849313_2 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002891 243.0
SYD3_k127_6849313_3 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000001137 229.0
SYD3_k127_6849313_4 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000001242 152.0
SYD3_k127_6849313_6 Belongs to the UPF0109 family K06960 - - 0.00000000000000000000000000000000843 134.0
SYD3_k127_6849313_7 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000001613 91.0
SYD3_k127_6862657_0 endonuclease activity K07451 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008678 269.0
SYD3_k127_6863992_0 LPXTG-motif cell wall anchor domain - - - 2.401e-226 738.0
SYD3_k127_6863992_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003793 564.0
SYD3_k127_6863992_2 lysyltransferase activity K07027,K08256 - 2.4.1.345 0.0000000000000000000000000000000000000000001685 183.0
SYD3_k127_6877510_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000004948 252.0
SYD3_k127_6881762_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1403.0
SYD3_k127_6881762_1 FtsX-like permease family K02004 - - 0.0 1133.0
SYD3_k127_6881762_10 peptidyl-tyrosine sulfation - - - 0.0000000001802 63.0
SYD3_k127_6881762_2 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 - 2.7.11.5 3.145e-267 870.0
SYD3_k127_6881762_3 Lipocalin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003947 482.0
SYD3_k127_6881762_4 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005837 340.0
SYD3_k127_6881762_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 331.0
SYD3_k127_6881762_6 domain, Protein K01218 - 3.2.1.78 0.000000000000000000000000000000000000000000000000000000000000000000000000003554 269.0
SYD3_k127_6881762_7 PFAM KWG Leptospira - - - 0.000000000000000000000000000000000000000003717 181.0
SYD3_k127_6881762_8 HDOD domain - - - 0.0000000000000000000000000000000001553 147.0
SYD3_k127_6881762_9 Multicopper oxidase K22350 - 1.16.3.3 0.000000000000000000007817 92.0
SYD3_k127_6889065_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 0.0 1036.0
SYD3_k127_6889065_1 4-alpha-D-((1- 4)-alpha-D-glucano)trehalose trehalohydrolase K01236 - 3.2.1.141 1.765e-281 877.0
SYD3_k127_6889065_10 Protein of unknown function (DUF971) K03593 - - 0.000000000000000000000000000000000000002167 170.0
SYD3_k127_6889065_11 chemotaxis K02659,K03408 - - 0.000000000000000000000000000000000000004858 165.0
SYD3_k127_6889065_2 Histidine Phosphotransfer domain K03407 - 2.7.13.3 5.378e-263 826.0
SYD3_k127_6889065_3 Histidine kinase - - - 2.33e-256 827.0
SYD3_k127_6889065_4 Ribosomal protein S1-like RNA-binding domain K02945 - - 3.125e-229 719.0
SYD3_k127_6889065_5 PFAM chemotaxis sensory transducer - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 537.0
SYD3_k127_6889065_6 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000489 514.0
SYD3_k127_6889065_7 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006831 504.0
SYD3_k127_6889065_8 PFAM metal-dependent phosphohydrolase, HD sub domain K01524,K06950 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 381.0
SYD3_k127_6889065_9 Transport and Golgi organisation 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007402 342.0
SYD3_k127_6898442_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 415.0
SYD3_k127_6898442_1 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 366.0
SYD3_k127_6921493_0 domain, Protein - - - 0.0 1481.0
SYD3_k127_6921493_1 Belongs to the GARS family K01945 - 6.3.4.13 1.36e-208 654.0
SYD3_k127_6921493_10 - - - - 0.0000000000000002285 90.0
SYD3_k127_6921493_12 peptidyl-tyrosine sulfation - - - 0.0001114 54.0
SYD3_k127_6921493_2 PFAM Glycosyl transferase, group 1 K12994 - 2.4.1.349 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 527.0
SYD3_k127_6921493_3 PFAM permease YjgP YjgQ family protein K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009889 537.0
SYD3_k127_6921493_4 PFAM permease YjgP YjgQ family protein K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004399 495.0
SYD3_k127_6921493_5 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 287.0
SYD3_k127_6921493_6 SCO1/SenC - - - 0.0000000000000000000000000000000000000000000000000000000000000000005953 241.0
SYD3_k127_6921493_7 Belongs to the SUA5 family K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000004161 215.0
SYD3_k127_6921493_8 Multicopper oxidase K22350 - 1.16.3.3 0.00000000000000000000000000000000000000000000004606 177.0
SYD3_k127_6921493_9 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.00000000000000000008328 107.0
SYD3_k127_6938365_0 A G-specific K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004494 398.0
SYD3_k127_6938365_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004092 387.0
SYD3_k127_6938365_2 B-1 B cell differentiation K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 396.0
SYD3_k127_6938365_3 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005371 361.0
SYD3_k127_6938365_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 300.0
SYD3_k127_6938365_5 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000000000000000004156 239.0
SYD3_k127_6938365_6 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.000000000000000000000000000000004967 127.0
SYD3_k127_6938365_7 - - - - 0.0000000000000000000000000000002557 144.0
SYD3_k127_6938365_8 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000001801 123.0
SYD3_k127_6938365_9 domain protein - - - 0.00000000000000000000004825 117.0
SYD3_k127_6970236_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 7.299e-252 792.0
SYD3_k127_6970236_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 1.329e-249 775.0
SYD3_k127_6970236_10 Response regulator, receiver K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000662 391.0
SYD3_k127_6970236_11 Enoyl-CoA hydratase/isomerase K11264 - 4.1.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006993 388.0
SYD3_k127_6970236_12 NMT1-like family K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 379.0
SYD3_k127_6970236_13 Belongs to the DapA family K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009117 351.0
SYD3_k127_6970236_14 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 317.0
SYD3_k127_6970236_15 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004577 339.0
SYD3_k127_6970236_16 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 305.0
SYD3_k127_6970236_17 PFAM LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004663 266.0
SYD3_k127_6970236_18 Cys-tRNA(Pro) hydrolase activity K19055 - - 0.00000000000000000000000000000000000000000000000000000000000347 211.0
SYD3_k127_6970236_19 protein histidine kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000003977 220.0
SYD3_k127_6970236_2 Acyl-CoA dehydrogenase, C-terminal domain K00252 - 1.3.8.6 9.16e-199 630.0
SYD3_k127_6970236_20 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000000000000000001083 191.0
SYD3_k127_6970236_21 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000000000000000002834 166.0
SYD3_k127_6970236_22 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07315 - 3.1.3.3 0.00000000000004272 80.0
SYD3_k127_6970236_23 response regulator receiver K03413 - - 0.0000000000009138 81.0
SYD3_k127_6970236_3 PBS lyase HEAT-like repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002585 646.0
SYD3_k127_6970236_4 Methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003393 615.0
SYD3_k127_6970236_5 chemotaxis protein K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 610.0
SYD3_k127_6970236_6 III protein, CoA-transferase family K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 522.0
SYD3_k127_6970236_7 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004654 515.0
SYD3_k127_6970236_8 PFAM peptidase M48 Ste24p - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007248 519.0
SYD3_k127_6970236_9 Formate dehydrogenase, alpha subunit K00123 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006464,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009326,GO:0009987,GO:0016043,GO:0016226,GO:0016491,GO:0016622,GO:0016903,GO:0018282,GO:0018289,GO:0018291,GO:0019538,GO:0022607,GO:0031163,GO:0032991,GO:0036211,GO:0042597,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0047111,GO:0051186,GO:0055114,GO:0071704,GO:0071840,GO:1901564,GO:1902494 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005267 409.0
SYD3_k127_6988425_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002845 596.0
SYD3_k127_7003536_0 Domain of unknown function (DUF3413) K07014 - - 7.138e-272 848.0
SYD3_k127_7003536_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 8.404e-271 861.0
SYD3_k127_7003536_11 Thiopurine S-methyltransferase (TPMT) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006864 258.0
SYD3_k127_7003536_12 PFAM SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007302 245.0
SYD3_k127_7003536_13 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000001325 231.0
SYD3_k127_7003536_14 PFAM Branched-chain amino acid transport system permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000001745 216.0
SYD3_k127_7003536_15 HIT domain K02503 - - 0.0000000000000000000000000000000000000000000002192 170.0
SYD3_k127_7003536_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 601.0
SYD3_k127_7003536_3 N-succinyltransferase beta subunit K00673 - 2.3.1.109 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 556.0
SYD3_k127_7003536_4 Peptidase dimerisation domain K01295 - 3.4.17.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004048 508.0
SYD3_k127_7003536_5 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 484.0
SYD3_k127_7003536_6 phosphatidylinositol metabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009879 372.0
SYD3_k127_7003536_7 PFAM ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 358.0
SYD3_k127_7003536_8 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 347.0
SYD3_k127_7003536_9 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001099 276.0
SYD3_k127_7003680_0 pyruvate phosphate dikinase K01007 - 2.7.9.2 1.829e-273 879.0
SYD3_k127_7003680_1 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 565.0
SYD3_k127_7003680_10 alcohol dehydrogenase K13953 - 1.1.1.1 0.000000000000000000005109 106.0
SYD3_k127_7003680_11 Dinitrogenase iron-molybdenum cofactor - - - 0.00000000000000000004071 105.0
SYD3_k127_7003680_12 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000006261 70.0
SYD3_k127_7003680_13 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.00003306 53.0
SYD3_k127_7003680_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 526.0
SYD3_k127_7003680_3 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 445.0
SYD3_k127_7003680_4 PFAM ATP-binding region ATPase domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 329.0
SYD3_k127_7003680_5 - - - - 0.00000000000000000000000000000000000000000000000006055 200.0
SYD3_k127_7003680_6 response regulator - - - 0.000000000000000000000000000000000000000002244 160.0
SYD3_k127_7003680_7 molybdopterin converting factor K03635 - 2.8.1.12 0.000000000000000000000000000000000004329 144.0
SYD3_k127_7003680_8 phosphorelay signal transduction system - - - 0.000000000000000000000000000003221 140.0
SYD3_k127_7003680_9 - - - - 0.000000000000000000000000004673 119.0
SYD3_k127_7030599_0 PFAM Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 483.0
SYD3_k127_7030599_1 ATP ADP translocase K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 366.0
SYD3_k127_7030599_2 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 370.0
SYD3_k127_7030599_3 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.0000000000000000000000000000000000000000000000213 171.0
SYD3_k127_7030599_4 TIGRFAM hydrogenase (NiFe) small subunit (hydA) K06282,K18008 - 1.12.2.1,1.12.99.6 0.00000000000000000000000000000000000000000000002413 173.0
SYD3_k127_7036121_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.25e-271 844.0
SYD3_k127_7036121_1 Belongs to the heat shock protein 70 family K04043 - - 4.425e-233 744.0
SYD3_k127_7036121_2 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 340.0
SYD3_k127_7036121_3 PFAM Cyclic nucleotide-binding - - - 0.000000000000000000000000000000000000000000000003957 173.0
SYD3_k127_7036121_4 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.0000000000000001667 93.0
SYD3_k127_7080940_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 2.927e-239 764.0
SYD3_k127_7080940_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 513.0
SYD3_k127_7080940_2 PQQ enzyme repeat K17713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006083 442.0
SYD3_k127_7080940_3 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 402.0
SYD3_k127_7080940_4 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004817 312.0
SYD3_k127_7080940_5 protein trimerization K15368 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 307.0
SYD3_k127_7080940_6 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 300.0
SYD3_k127_7080940_7 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000001519 189.0
SYD3_k127_7080940_9 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000003779 70.0
SYD3_k127_7083711_0 Putative oxidoreductase C terminal domain - - - 0.00000000000000000000000000000000000000000000000000000004695 208.0
SYD3_k127_7085408_0 Surface antigen K07278 - - 7.148e-244 770.0
SYD3_k127_7085408_1 Domain of unknown function (DUF814) - - - 4.138e-200 635.0
SYD3_k127_7085408_2 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005888 395.0
SYD3_k127_7085408_3 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000000000000000000000001677 138.0
SYD3_k127_7100762_0 ABC transporter K06020 - 3.6.3.25 5.751e-205 658.0
SYD3_k127_7100762_1 Putative neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004775 420.0
SYD3_k127_7100762_2 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006871 342.0
SYD3_k127_7100762_3 lipolytic protein G-D-S-L family K01730,K10804 - 3.1.1.5,4.2.2.6 0.0000000000000000000000000000000000000000000007299 177.0
SYD3_k127_7100762_4 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000000008426 145.0
SYD3_k127_7132175_0 Protein of unknown function (DUF1015) - - - 8.343e-225 701.0
SYD3_k127_7132175_1 TIGRFAM cytochrome C family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 517.0
SYD3_k127_7132175_2 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000001814 230.0
SYD3_k127_7132175_3 Dienelactone hydrolase family - - - 0.000001216 50.0
SYD3_k127_7150354_0 ATP dependent DNA ligase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000067 528.0
SYD3_k127_7150354_1 Pyridoxal-phosphate dependent enzyme K12339 - 2.5.1.47 0.000000000009171 71.0
SYD3_k127_715611_0 serine-type endopeptidase activity K04771,K08372 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 540.0
SYD3_k127_715611_1 GGDEF domain K21009 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002434 259.0
SYD3_k127_715611_2 response regulator K03654 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000001566 194.0
SYD3_k127_715611_3 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.00000000000000000000000000000000000000000000003244 174.0
SYD3_k127_715611_4 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0000000000000000000000000001005 116.0
SYD3_k127_7193358_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009824 391.0
SYD3_k127_7193358_1 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 300.0
SYD3_k127_7234167_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 551.0
SYD3_k127_7234167_1 Putative citrate transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004814 457.0
SYD3_k127_7234167_2 PFAM Metallophosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008612 295.0
SYD3_k127_7237004_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1040.0
SYD3_k127_7237004_1 Aminotransferase K01845 - 5.4.3.8 2.21e-238 749.0
SYD3_k127_7237004_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003774 595.0
SYD3_k127_7237004_3 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004134 589.0
SYD3_k127_7237004_4 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005477 464.0
SYD3_k127_7237004_5 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004766 397.0
SYD3_k127_7237004_6 ATP synthesis coupled proton transport K02109 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002978 257.0
SYD3_k127_7237004_7 ATP hydrolysis coupled proton transport K02110,K02124 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000003399 110.0
SYD3_k127_7249111_0 PrkA serine protein kinase C-terminal domain - - - 0.0 1161.0
SYD3_k127_7249111_1 Heat shock 70 kDa protein K04043 - - 2.872e-287 887.0
SYD3_k127_7249111_2 Bacterial capsule synthesis protein PGA_cap K07282 - - 4.692e-197 624.0
SYD3_k127_7249111_3 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 432.0
SYD3_k127_7249111_4 photoreceptor activity K11527 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 378.0
SYD3_k127_7249111_5 serine-type endopeptidase activity K04772,K08372 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009195 368.0
SYD3_k127_7249111_6 deaminase K01493 - 3.5.4.12 0.0000000000000000000000000000000000000000000000000000000000000000001497 257.0
SYD3_k127_7258464_0 fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 5.328e-319 981.0
SYD3_k127_7258464_1 Fumarate reductase, iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002323 457.0
SYD3_k127_7258464_2 Domain of unknown function (DUF4262) - - - 0.000000000000000000000000003709 111.0
SYD3_k127_7264_0 DNA helicase K03656,K03657 - 3.6.4.12 0.0 1103.0
SYD3_k127_7264_1 Cytochrome c554 and c-prime - - - 3.114e-254 788.0
SYD3_k127_7264_2 HAMP domain K02482 - 2.7.13.3 5.998e-205 653.0
SYD3_k127_7264_3 Double sensory domain of two-component sensor kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006811 460.0
SYD3_k127_7264_4 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 448.0
SYD3_k127_7264_5 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004147 436.0
SYD3_k127_7264_6 PFAM ABC transporter related K05776 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 341.0
SYD3_k127_7264_7 Conserved protein containing a Zn-ribbon-like motif possibly RNA-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000008157 237.0
SYD3_k127_7264_8 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000008569 193.0
SYD3_k127_7271861_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K02337,K14162 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 4.57e-215 687.0
SYD3_k127_7271861_1 nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.00000000000000000000000000000000000000000000000008777 179.0
SYD3_k127_7280696_0 PFAM Aminotransferase class I and II K00814 - 2.6.1.2 2.59e-220 691.0
SYD3_k127_7280696_1 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 598.0
SYD3_k127_7280696_2 Pfam:Methyltransf_26 - - - 0.000000000000000000000000000000000000000000000000000000000000000000006305 241.0
SYD3_k127_7280696_4 cog0421, spermidine synthase - - - 0.00000000000003282 82.0
SYD3_k127_7280696_5 endonuclease activity K07451 - - 0.00007494 46.0
SYD3_k127_7297024_0 Methionine synthase K00548 - 2.1.1.13 0.0 1967.0
SYD3_k127_7297024_1 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 8.51e-251 778.0
SYD3_k127_7297024_11 Domain of unknown function (DUF1844) - - - 0.00000000000000000000000000002419 135.0
SYD3_k127_7297024_13 PFAM adenylyl cyclase class-3 4 guanylyl cyclase K07216 - - 0.00000009226 61.0
SYD3_k127_7297024_2 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 1.902e-244 782.0
SYD3_k127_7297024_3 PDZ DHR GLGF domain protein K04771 - 3.4.21.107 1.419e-212 670.0
SYD3_k127_7297024_4 Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 379.0
SYD3_k127_7297024_5 Late embryogenesis abundant protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 339.0
SYD3_k127_7297024_6 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 327.0
SYD3_k127_7297024_7 PFAM Phosphomethylpyrimidine kinase K00941,K14153,K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002604 342.0
SYD3_k127_7297024_8 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000006562 280.0
SYD3_k127_7297024_9 GDSL-like Lipase/Acylhydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000004456 235.0
SYD3_k127_7307827_0 Periplasmic binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006203 359.0
SYD3_k127_7307827_1 Cytochrome D1 heme domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 331.0
SYD3_k127_7307827_2 peptidylprolyl isomerase K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000000000001101 186.0
SYD3_k127_7316177_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003809 560.0
SYD3_k127_7316177_1 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 549.0
SYD3_k127_7316177_2 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003045 454.0
SYD3_k127_7316177_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 452.0
SYD3_k127_7316177_4 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006365 429.0
SYD3_k127_7316177_5 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000003558 219.0
SYD3_k127_7328126_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0 1049.0
SYD3_k127_7328126_1 diguanylate cyclase - - - 4.272e-288 912.0
SYD3_k127_7328126_11 - - - - 0.000000000000000000000000000000000000000000000000001198 189.0
SYD3_k127_7328126_14 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589,K13052 - - 0.000000000000000000000007547 114.0
SYD3_k127_7328126_15 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.000001046 54.0
SYD3_k127_7328126_2 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 451.0
SYD3_k127_7328126_3 Pfam Transposase IS66 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 427.0
SYD3_k127_7328126_4 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC K06148,K16012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 345.0
SYD3_k127_7328126_5 PFAM iron dependent repressor K03709 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 361.0
SYD3_k127_7328126_6 Large family of predicted nucleotide-binding domains K07175 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004857 274.0
SYD3_k127_7328126_7 FMN binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002061 251.0
SYD3_k127_7328126_8 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0097577,GO:0098771 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000002394 246.0
SYD3_k127_7328126_9 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000002489 246.0
SYD3_k127_7344200_0 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000000000000000000000000000000000000000000318 189.0
SYD3_k127_7344200_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.00000000000000000000000000000002432 131.0
SYD3_k127_7344200_2 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000000000002218 124.0
SYD3_k127_7344200_3 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000002798 92.0
SYD3_k127_7393476_0 Histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 544.0
SYD3_k127_7393476_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006731 484.0
SYD3_k127_7393476_2 Belongs to the methyltransferase superfamily K07444,K12297 - 2.1.1.173,2.1.1.264 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 471.0
SYD3_k127_7393476_3 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 422.0
SYD3_k127_7393476_4 Two component transcriptional regulator, winged helix family K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005858 402.0
SYD3_k127_7393476_5 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 347.0
SYD3_k127_7393476_6 chlorophyll binding K03286 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 341.0
SYD3_k127_7394794_0 asparaginyl-tRNA synthetase K01893 - 6.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 454.0
SYD3_k127_7394794_1 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007562 391.0
SYD3_k127_7394794_2 Chemotaxis protein CheY K03413 - - 0.000000000000000000000000000000000000000000003049 172.0
SYD3_k127_7394794_3 PBS lyase - - - 0.00000000000000000000000002844 110.0
SYD3_k127_7428060_0 glutamine synthetase K01915 - 6.3.1.2 3.18e-228 715.0
SYD3_k127_7428060_1 alcohol dehydrogenase K00043 - 1.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 331.0
SYD3_k127_7428060_2 Belongs to the aldehyde dehydrogenase family K00128,K09472 - 1.2.1.3,1.2.1.99 0.00000000003787 63.0
SYD3_k127_7432664_0 Belongs to the aldehyde dehydrogenase family K00128,K09472 - 1.2.1.3,1.2.1.99 1.534e-241 754.0
SYD3_k127_7432664_1 Serine threonine protein kinase involved in cell cycle control - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000809 357.0
SYD3_k127_7432664_2 Protein of unknown function (DUF3037) - - - 0.000000000000000000000000000000000000000000006938 169.0
SYD3_k127_7432664_3 Haem-binding domain - - - 0.0000000000000000000000000000001359 136.0
SYD3_k127_7488366_0 acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003895 402.0
SYD3_k127_7488366_1 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009681 395.0
SYD3_k127_7488366_2 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 358.0
SYD3_k127_7488366_3 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000002847 222.0
SYD3_k127_7493828_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 608.0
SYD3_k127_7493828_1 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005903 595.0
SYD3_k127_7493828_2 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 569.0
SYD3_k127_7493828_3 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 397.0
SYD3_k127_7493828_4 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000002736 161.0
SYD3_k127_7493828_5 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000001886 129.0
SYD3_k127_7506136_0 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 392.0
SYD3_k127_7520438_0 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001516 294.0
SYD3_k127_7520438_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000003239 250.0
SYD3_k127_7520438_2 - - - - 0.00000000000000000000000000000001547 136.0
SYD3_k127_7520438_5 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000003541 91.0
SYD3_k127_7525385_0 CoA-binding domain - - - 1.35e-214 685.0
SYD3_k127_7525385_1 N-acetylglucosaminylinositol deacetylase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005353 246.0
SYD3_k127_7525385_2 Nucleotidyl transferase K00978 - 2.7.7.33 0.00000000000000001407 83.0
SYD3_k127_7566745_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 597.0
SYD3_k127_7566745_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007093 497.0
SYD3_k127_7566745_2 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 431.0
SYD3_k127_7566745_3 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004134 436.0
SYD3_k127_7566745_4 Deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 344.0
SYD3_k127_7566745_5 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000832 276.0
SYD3_k127_7566745_6 Domain of unknown function (DUF4388) K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000006422 186.0
SYD3_k127_7566745_8 Two component signalling adaptor domain - - - 0.000000000000000000000000008853 121.0
SYD3_k127_7566745_9 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.00000000000000000000008903 109.0
SYD3_k127_7570362_0 PrkA AAA domain K07180 - - 3.842e-283 880.0
SYD3_k127_7570362_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 2.747e-280 865.0
SYD3_k127_7570362_10 - K07275 - - 0.0000000000000000000000000000000000008198 147.0
SYD3_k127_7570362_11 Cold shock protein K03704 - - 0.00000000000000000000000000000001356 128.0
SYD3_k127_7570362_12 - - - - 0.00000000000000000000000006413 115.0
SYD3_k127_7570362_13 - - - - 0.00000000000000000000002769 112.0
SYD3_k127_7570362_14 - - - - 0.00000000009397 74.0
SYD3_k127_7570362_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 520.0
SYD3_k127_7570362_3 TonB C terminal K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 393.0
SYD3_k127_7570362_4 energy transducer activity K03646,K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000186 281.0
SYD3_k127_7570362_5 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000000000000000000000000000000000000000000000000008089 209.0
SYD3_k127_7570362_7 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000000001374 170.0
SYD3_k127_7570362_9 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000004677 147.0
SYD3_k127_7586884_0 Alpha amylase, catalytic domain - - - 6.141e-250 782.0
SYD3_k127_7586884_1 Enoyl-(Acyl carrier protein) reductase K15734 - 1.1.1.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008781 429.0
SYD3_k127_7586884_11 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03547 - - 0.00000000000003533 88.0
SYD3_k127_7586884_2 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 415.0
SYD3_k127_7586884_3 Acid phosphatase homologues K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 384.0
SYD3_k127_7586884_4 TRAP transporter solute receptor TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003279 375.0
SYD3_k127_7586884_5 Histidine kinase A domain protein K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 366.0
SYD3_k127_7586884_6 Nadph-dependent fmn reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003741 296.0
SYD3_k127_7586884_7 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006929 270.0
SYD3_k127_7586884_8 Pfam:Pyridox_oxidase K07006 - - 0.000000000000000000000000000000000000000000000000000000000000000000003244 258.0
SYD3_k127_7586884_9 transferase activity, transferring glycosyl groups K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000002477 251.0
SYD3_k127_7594938_0 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006046 373.0
SYD3_k127_7594938_1 phosphorelay sensor kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000045 268.0
SYD3_k127_7634250_0 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 452.0
SYD3_k127_7634250_1 N-terminal domain of cytochrome oxidase-cbb3, FixP - - - 0.0000000000000000000000000003659 114.0
SYD3_k127_7652636_0 cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 545.0
SYD3_k127_7652636_1 Acyltransferase family - - - 0.0000000000000000000000000000000000147 139.0
SYD3_k127_7652636_4 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.0000002199 52.0
SYD3_k127_7652884_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 2.083e-264 834.0
SYD3_k127_7652884_1 abc-type fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005141 396.0
SYD3_k127_7652884_2 Alpha/beta hydrolase family K03928 - 3.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 364.0
SYD3_k127_7652884_3 Histidine kinase K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000002568 228.0
SYD3_k127_7652884_4 Protein of unknown function (DUF3467) - - - 0.0000000000000000000000000000000000000000000001008 169.0
SYD3_k127_7652884_5 photosystem II stabilization K00703,K02237,K02238 - 2.4.1.21 0.00000000000000000000000000000001182 135.0
SYD3_k127_7652884_6 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000001475 137.0
SYD3_k127_7699573_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 1.836e-297 917.0
SYD3_k127_7699573_1 carboxylase K01968 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.4.1.4 4.179e-268 886.0
SYD3_k127_7699573_2 Acyl-CoA dehydrogenase, C-terminal domain - - - 5.824e-205 642.0
SYD3_k127_7699573_3 PFAM Uncharacterised ArCR, COG2043 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007612 376.0
SYD3_k127_7699573_5 Staphylococcal nuclease homologue - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007703 260.0
SYD3_k127_7699573_6 oxygen carrier activity K07216 - - 0.00000000000000000000000000000000000000000000002524 173.0
SYD3_k127_7699573_7 PFAM thioesterase superfamily K02614 - - 0.000000000000000000000000000000004508 140.0
SYD3_k127_7699573_8 Transcriptional regulator - - - 0.000000000000000000001282 97.0
SYD3_k127_7704394_0 Thiamine biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004821 411.0
SYD3_k127_7704394_1 pyruvate phosphate dikinase K01006 - 2.7.9.1 0.00000000000000000000001094 102.0
SYD3_k127_7760729_0 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.0 1010.0
SYD3_k127_7760729_1 FAD dependent oxidoreductase K07137 - - 6.376e-300 925.0
SYD3_k127_7760729_10 Mannose-6-phosphate isomerase - - - 0.000000000000000000000000000000000000000000000000000000000006007 235.0
SYD3_k127_7760729_11 peptidoglycan binding K02453,K03749 GO:0000910,GO:0003674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0022402,GO:0030428,GO:0032153,GO:0032506,GO:0042834,GO:0044464,GO:0051301,GO:0097367 - 0.00000000000000000000000000000000000000000000000000004225 194.0
SYD3_k127_7760729_12 chemotaxis K02659,K03408 - - 0.00000000000000000000000000000000000003849 149.0
SYD3_k127_7760729_13 chemotaxis K03408 - - 0.0000000000000000000000000000000000009802 160.0
SYD3_k127_7760729_14 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000004343 108.0
SYD3_k127_7760729_17 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.00000000000003125 72.0
SYD3_k127_7760729_2 Histidine Phosphotransfer domain K03407 - 2.7.13.3 2.325e-297 932.0
SYD3_k127_7760729_3 Transporter - - - 6.167e-264 837.0
SYD3_k127_7760729_4 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 2.195e-215 703.0
SYD3_k127_7760729_5 signal peptide peptidase SppA, 36K type K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 509.0
SYD3_k127_7760729_6 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 539.0
SYD3_k127_7760729_7 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 473.0
SYD3_k127_7760729_8 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006356 462.0
SYD3_k127_7760729_9 Protein similar to CwfJ C-terminus 1 K19710 - 2.7.7.53 0.00000000000000000000000000000000000000000000000000000000000000000000000004107 284.0
SYD3_k127_7765785_0 WD40-like Beta Propeller Repeat - - - 0.0 1131.0
SYD3_k127_7765785_1 alpha beta - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 392.0
SYD3_k127_7765785_2 Cation efflux family K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007161 310.0
SYD3_k127_7765785_3 GAF domain-containing protein K08968 - 1.8.4.14 0.00000000000000000000000000000000000000000000000000000000009292 208.0
SYD3_k127_7770681_0 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 574.0
SYD3_k127_7770681_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000001508 113.0
SYD3_k127_7770681_2 Glutathione S-transferase K00799 - 2.5.1.18 0.0000001519 55.0
SYD3_k127_7783994_0 Domain of unknown function (DUF3482) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008947 585.0
SYD3_k127_7783994_1 Protein of unknown function (DUF2868) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008893 521.0
SYD3_k127_7783994_2 Heat shock protein DnaJ domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 487.0
SYD3_k127_7783994_3 Dihydrodipicolinate reductase, N-terminus K21672 - 1.4.1.12,1.4.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 404.0
SYD3_k127_7783994_4 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001034 253.0
SYD3_k127_7830404_0 Transglycosylase SLT domain K08307 - - 7.081e-218 689.0
SYD3_k127_7830404_1 FtsX-like permease family - - - 8.103e-196 619.0
SYD3_k127_7830404_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003796 594.0
SYD3_k127_7830404_4 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007486 468.0
SYD3_k127_7830404_5 ZIP Zinc transporter K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 391.0
SYD3_k127_7830404_6 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000703 313.0
SYD3_k127_7830404_7 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000001211 247.0
SYD3_k127_7872746_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000602 289.0
SYD3_k127_7872746_1 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000000000008255 184.0
SYD3_k127_7907655_0 PFAM DNA primase small subunit - - - 9.201e-207 651.0
SYD3_k127_7907655_1 Membrane protein, TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008025 392.0
SYD3_k127_7907655_2 ATP dependent DNA ligase domain protein - - - 0.000000000000000000000000000000000000000000005994 163.0
SYD3_k127_791584_0 Flavin containing amine oxidoreductase K01854 - 5.4.99.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009523 606.0
SYD3_k127_791584_1 WYL domain K13573 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004023 535.0
SYD3_k127_791584_2 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K00042,K18121 - 1.1.1.31,1.1.1.60,1.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 438.0
SYD3_k127_791584_3 Response regulator, receiver K03413 - - 0.0000000000000000000000000000000000000000000000001424 196.0
SYD3_k127_791584_4 Regulates arginine biosynthesis genes K03402 - - 0.0000000000000000000000000007243 113.0
SYD3_k127_7919949_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 8.036e-232 734.0
SYD3_k127_7919949_1 N-terminal domain of unknown function (DUF4140) - - - 7.108e-218 693.0
SYD3_k127_7919949_2 imidazolonepropionase K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 558.0
SYD3_k127_7919949_3 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004266 513.0
SYD3_k127_7919949_4 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 422.0
SYD3_k127_7919949_5 Glutamine amidotransferases class-II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 393.0
SYD3_k127_7919949_6 Protein of unknown function DUF99 K09120 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008191 294.0
SYD3_k127_7919949_7 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.00000000000000000000000000000000000000000000000000000000000000004737 243.0
SYD3_k127_7919949_8 protein family UPF0079, ATPase K06925 - - 0.0000000000000000000000000000000000000000000000000000000000000004658 248.0
SYD3_k127_7919949_9 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000000000000000002951 171.0
SYD3_k127_7934263_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1063.0
SYD3_k127_7934263_1 ATPase family associated with various cellular activities (AAA) K06027 - 3.6.4.6 9.336e-250 781.0
SYD3_k127_7934263_3 glycosyl transferase family 8 - - - 0.000000000000002941 84.0
SYD3_k127_7935359_0 Phosphoenolpyruvate phosphomutase K01637 - 4.1.3.1 0.0 1101.0
SYD3_k127_7935359_1 Multicopper oxidase K22350 - 1.16.3.3 2.982e-201 651.0
SYD3_k127_7935359_2 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 387.0
SYD3_k127_7935359_3 Spermine/spermidine synthase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000365 263.0
SYD3_k127_7935359_4 23S rRNA (guanine(2445)-N(2))-methyltransferase activity K21515 - 2.1.1.209 0.000000000000000000000000000000000000000000000000000000000000004046 222.0
SYD3_k127_7935359_5 Histidine kinase - - - 0.0000000000000000000000000000002748 140.0
SYD3_k127_7935359_6 Spermine/spermidine synthase domain - - - 0.00000000028 65.0
SYD3_k127_7947553_0 AcrB/AcrD/AcrF family K03296,K18138 - - 0.0 1527.0
SYD3_k127_7947553_1 Angiotensin-converting enzyme K01283 - 3.4.15.1 5.159e-296 915.0
SYD3_k127_7947553_2 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 485.0
SYD3_k127_7947553_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007754 479.0
SYD3_k127_7947553_4 Belongs to the UPF0337 (CsbD) family - - - 0.0000000000000007819 93.0
SYD3_k127_7948438_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 529.0
SYD3_k127_7977497_0 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K07444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003672 457.0
SYD3_k127_7977497_1 ABC transporter, ATP-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007995 442.0
SYD3_k127_7977497_2 ABC transporter K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008519 431.0
SYD3_k127_7977497_3 Organic Anion Transporter Polypeptide (OATP) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 435.0
SYD3_k127_7977497_4 reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003648 367.0
SYD3_k127_7977497_5 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004755 335.0
SYD3_k127_7977497_6 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000003831 244.0
SYD3_k127_7977497_7 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000006973 177.0
SYD3_k127_798392_0 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 458.0
SYD3_k127_798392_1 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007209 278.0
SYD3_k127_798392_2 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000000008788 227.0
SYD3_k127_798392_3 chaperone-mediated protein folding - - - 0.000000000000000000000000000000000000000000001083 167.0
SYD3_k127_798392_4 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.0000000000000000000000000000000000000000005734 168.0
SYD3_k127_798392_5 - - - - 0.000000000000000000000000000000386 126.0
SYD3_k127_8008570_0 DNA-templated transcription, initiation K03088,K11333 - 1.3.7.14,1.3.7.15 0.0000000000000000000001421 101.0
SYD3_k127_8008570_1 Serine Threonine protein kinase K12132 - 2.7.11.1 0.000000000000000007046 90.0
SYD3_k127_8014907_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 1.527e-298 941.0
SYD3_k127_8014907_1 Domain of unknown function (DUF4388) - - - 1.755e-206 682.0
SYD3_k127_8014907_2 Acts as a magnesium transporter K06213 - - 2.206e-198 632.0
SYD3_k127_8014907_3 cytochrome c biogenesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928 449.0
SYD3_k127_8014907_4 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 416.0
SYD3_k127_8014907_5 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003684 412.0
SYD3_k127_8014907_6 - - - - 0.000000000000000000000000000000000000000000000001022 181.0
SYD3_k127_8030351_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007875 501.0
SYD3_k127_8049451_0 aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 2.767e-217 679.0
SYD3_k127_8049451_2 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006032 347.0
SYD3_k127_8049451_4 Methyltransferase domain - - - 0.0001929 48.0
SYD3_k127_8168150_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 313.0
SYD3_k127_8168150_1 Transcriptional regulator, LysR family - - - 0.0000000000000000000000000006029 115.0
SYD3_k127_8175204_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006939 567.0
SYD3_k127_8175204_1 Uracil phosphoribosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 511.0
SYD3_k127_8175204_10 Could be involved in septation K06412 GO:0000003,GO:0008150,GO:0019954,GO:0030436,GO:0032502,GO:0043934 - 0.0000000000000005439 84.0
SYD3_k127_8175204_2 Amino-transferase class IV K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 473.0
SYD3_k127_8175204_3 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009577 410.0
SYD3_k127_8175204_4 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 344.0
SYD3_k127_8175204_5 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008363 317.0
SYD3_k127_8175204_6 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000003033 239.0
SYD3_k127_8175204_7 Binds together with S18 to 16S ribosomal RNA K01754,K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000008441 231.0
SYD3_k127_8175204_8 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000001176 208.0
SYD3_k127_8175204_9 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000388 152.0
SYD3_k127_8176811_0 HAD superfamily (subfamily IG) hydrolase 5'-Nucleotidase - - - 3.702e-276 857.0
SYD3_k127_8176811_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 393.0
SYD3_k127_8176811_3 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 299.0
SYD3_k127_8176811_4 Lipoprotein K05811 - - 0.00000000000000000000000000000000002461 151.0
SYD3_k127_8180251_0 single-stranded-DNA-specific exonuclease RecJ K07462 - - 1.036e-289 898.0
SYD3_k127_8180251_1 PFAM Alcohol dehydrogenase zinc-binding domain protein K19745 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 506.0
SYD3_k127_8180251_2 cluster binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 394.0
SYD3_k127_8180251_3 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 344.0
SYD3_k127_8180251_4 Protein of unknown function (DUF1847) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000362 332.0
SYD3_k127_8180251_5 monooxygenase activity K06966 - 3.2.2.10 0.0000000000000000000005504 106.0
SYD3_k127_8184844_0 CoA-substrate-specific enzyme activase - - - 0.0 1891.0
SYD3_k127_8184844_1 pseudouridine synthase activity K06176 - 5.4.99.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004763 590.0
SYD3_k127_8184844_2 endonuclease activity K07451 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 442.0
SYD3_k127_8184844_3 PFAM PHP domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 372.0
SYD3_k127_8184844_5 - - - - 0.0000000000000000000000000001024 117.0
SYD3_k127_8184844_6 protein secretion K03116 - - 0.0000002918 63.0
SYD3_k127_8193292_0 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009355 419.0
SYD3_k127_8193292_1 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003465 301.0
SYD3_k127_8193292_2 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0000000000000000000000000000000000000000000000001992 176.0
SYD3_k127_8193834_0 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 359.0
SYD3_k127_8193834_1 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 340.0
SYD3_k127_8193834_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 330.0
SYD3_k127_8193834_3 ATP:ADP antiporter activity K01932,K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004149 288.0
SYD3_k127_8193834_4 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.000000000000000000000000000000000000000000000000000000000000000005745 257.0
SYD3_k127_8193834_5 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.00000000000000000000000000000000000000000000000000000000000002209 225.0
SYD3_k127_8194959_0 Transcriptional regulator, LysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003129 448.0
SYD3_k127_8194959_1 Membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 318.0
SYD3_k127_8194959_2 TIGRFAM channel protein, hemolysin III family K11068 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002753 252.0
SYD3_k127_8194959_3 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000001423 168.0
SYD3_k127_8194959_4 Protein of unknown function (DUF454) K09790 - - 0.00000000000000000000000000000000000000001149 177.0
SYD3_k127_8194959_5 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000003219 148.0
SYD3_k127_8194959_6 response regulator K03654 - 3.6.4.12 0.000000000000000000000000000000000002276 142.0
SYD3_k127_8194959_7 - - - - 0.0000000000000000000000000000001089 130.0
SYD3_k127_8195322_0 pyruvate phosphate dikinase K01006 - 2.7.9.1 0.0 1568.0
SYD3_k127_8195322_1 Protein-disulfide isomerase - - - 2.059e-316 982.0
SYD3_k127_8195322_10 phospho-2-dehydro-3-deoxyheptonate aldolase K03856,K04516 - 2.5.1.54,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 592.0
SYD3_k127_8195322_11 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003352 562.0
SYD3_k127_8195322_12 Cell division protein FtsI penicillin-binding protein 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003199 556.0
SYD3_k127_8195322_13 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 563.0
SYD3_k127_8195322_14 Heat shock protein DnaJ domain protein K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008276 511.0
SYD3_k127_8195322_15 Dihydrodipicolinate reductase, N-terminus K21672 - 1.4.1.12,1.4.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 484.0
SYD3_k127_8195322_16 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 501.0
SYD3_k127_8195322_17 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 454.0
SYD3_k127_8195322_18 Domain of unknown function (DUF2437) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004551 430.0
SYD3_k127_8195322_19 PGAP1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 411.0
SYD3_k127_8195322_2 Peptidase family M28 - - - 3.493e-277 899.0
SYD3_k127_8195322_20 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009851 387.0
SYD3_k127_8195322_21 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002459 407.0
SYD3_k127_8195322_22 PFAM Acyl-ACP thioesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 380.0
SYD3_k127_8195322_23 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 366.0
SYD3_k127_8195322_24 Dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 350.0
SYD3_k127_8195322_25 endonuclease activity K07451 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 340.0
SYD3_k127_8195322_26 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008528 328.0
SYD3_k127_8195322_27 Peptidase C26 K01658,K01664 - 2.6.1.85,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 342.0
SYD3_k127_8195322_28 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 309.0
SYD3_k127_8195322_29 membrane protein required for spore maturation in B.subtilis K06374 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004835 278.0
SYD3_k127_8195322_3 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 4.903e-263 817.0
SYD3_k127_8195322_30 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001181 287.0
SYD3_k127_8195322_31 Nucleoside recognition K06373 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007813 282.0
SYD3_k127_8195322_32 N-terminal half of MaoC dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001469 244.0
SYD3_k127_8195322_34 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000008566 240.0
SYD3_k127_8195322_35 OsmC-like protein K09136 - - 0.0000000000000000000000000000000000000000000000000000000000000000001884 232.0
SYD3_k127_8195322_36 PFAM glycosyl transferase family 25 K07270 - - 0.0000000000000000000000000000000000000000000000000000000000000000003264 261.0
SYD3_k127_8195322_37 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.000000000000000000000000000000000000000000000000000000000000000002704 231.0
SYD3_k127_8195322_38 Glyoxalase-like domain K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000004425 251.0
SYD3_k127_8195322_4 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 7.84e-251 780.0
SYD3_k127_8195322_40 domain, Protein K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000004624 216.0
SYD3_k127_8195322_43 Low affinity iron permease - - - 0.000000000000000000000000000000000000000000001385 171.0
SYD3_k127_8195322_44 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000000000000000000000004703 153.0
SYD3_k127_8195322_45 Late embryogenesis abundant protein - - - 0.0000000000000000000000000000000001914 144.0
SYD3_k127_8195322_5 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 7.682e-227 719.0
SYD3_k127_8195322_6 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K06001 - 4.2.1.20 6.207e-222 708.0
SYD3_k127_8195322_7 - - - - 8.587e-219 696.0
SYD3_k127_8195322_8 PFAM transglutaminase domain protein - - - 8.55e-218 686.0
SYD3_k127_8195322_9 Thiamine biosynthesis protein - - - 1.365e-202 633.0
SYD3_k127_8203795_0 Belongs to the DegT DnrJ EryC1 family K19430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 596.0
SYD3_k127_8203795_1 - - - - 0.0000000000000000000000000000000000000000000000000000006488 221.0
SYD3_k127_8203795_2 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000001994 91.0
SYD3_k127_8206551_0 Belongs to the D-alanine--D-alanine ligase family - - - 4.427e-215 675.0
SYD3_k127_8206551_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 352.0
SYD3_k127_8206551_2 Enoyl-(Acyl carrier protein) reductase K03793 - 1.5.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 356.0
SYD3_k127_8206551_3 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007609 300.0
SYD3_k127_8206551_4 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000000000000000000000000001831 217.0
SYD3_k127_8206551_5 DNA-binding protein with PD1-like DNA-binding motif K06934 - - 0.000000000008879 79.0
SYD3_k127_8208849_0 ATP dependent DNA ligase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 529.0
SYD3_k127_8208849_1 DNA polymerase LigD polymerase domain K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 436.0
SYD3_k127_8208849_3 tRNA methyltransferase complex GCD14 subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004996 302.0
SYD3_k127_8208849_4 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001026 278.0
SYD3_k127_8208849_5 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000000000000000000003137 236.0
SYD3_k127_8208849_6 hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000000001968 170.0
SYD3_k127_8208849_7 - - - - 0.00000000000000000000000000000000004886 142.0
SYD3_k127_8208849_8 exonuclease activity K16899 - 3.6.4.12 0.0000000000000000000000000000001566 126.0
SYD3_k127_8208849_9 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000000000000000000008288 136.0
SYD3_k127_8209289_0 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 575.0
SYD3_k127_8209289_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 484.0
SYD3_k127_8209289_2 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007044 465.0
SYD3_k127_8209289_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005769 452.0
SYD3_k127_8209289_4 Belongs to the pseudouridine synthase RsuA family K06178,K06182 - 5.4.99.21,5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 431.0
SYD3_k127_8209289_5 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007276 315.0
SYD3_k127_8209289_6 deoxyhypusine monooxygenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 315.0
SYD3_k127_8209289_7 Belongs to the SUA5 family K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006487 276.0
SYD3_k127_8209289_8 Protein of unknown function (DUF2892) - - - 0.000000000000000000002283 95.0
SYD3_k127_8225611_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0 1473.0
SYD3_k127_8225611_1 Belongs to the peptidase S16 family K04076 - 3.4.21.53 0.0 1044.0
SYD3_k127_8225611_10 Class III cytochrome C family - - - 0.00000000000000000000000000002065 120.0
SYD3_k127_8225611_12 Class III cytochrome C family - - - 0.000000000000000000000001047 107.0
SYD3_k127_8225611_13 PFAM UspA - - - 0.000000000000000001082 96.0
SYD3_k127_8225611_2 pfam abc1 K03688 - - 2.95e-273 850.0
SYD3_k127_8225611_3 MutS domain I K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 3.021e-244 785.0
SYD3_k127_8225611_4 Ami_3 K01448 - 3.5.1.28 1.866e-204 659.0
SYD3_k127_8225611_5 Prokaryotic glutathione synthetase, ATP-grasp domain K05844 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 413.0
SYD3_k127_8225611_7 Belongs to the SUA5 family K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000004282 199.0
SYD3_k127_8225611_8 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 3.4.21.88 0.00000000000000000000000000000000000000002952 166.0
SYD3_k127_8225611_9 Small hydrophilic plant seed protein - - - 0.00000000000000000000000000000000000000003486 157.0
SYD3_k127_8226979_0 SMART helicase c2 K03722 - 3.6.4.12 0.0 1015.0
SYD3_k127_8226979_1 Histidine kinase - - - 1.992e-239 759.0
SYD3_k127_8226979_2 histidine kinase HAMP region domain protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000908 496.0
SYD3_k127_8226979_3 Small GTP-binding protein K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009343 401.0
SYD3_k127_8226979_4 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 396.0
SYD3_k127_824231_0 ATPase components of ABC transporters with duplicated ATPase domains K06158 - - 1.517e-305 945.0
SYD3_k127_824231_1 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000000000000000000000000000000000000067 192.0
SYD3_k127_824231_2 - - - - 0.00000000000001546 79.0
SYD3_k127_8247609_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 304.0
SYD3_k127_8247609_1 - - - - 0.00000000000000000000000000000000000004065 150.0
SYD3_k127_8254587_0 DNA polymerase beta thumb K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 585.0
SYD3_k127_8254587_1 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.00000000000000000000000000000000000000000000000000002817 191.0
SYD3_k127_8262851_0 lysine 2,3-aminomutase K01843 - 5.4.3.2 4.386e-228 708.0
SYD3_k127_8262851_1 lysine 2,3-aminomutase K01843 - 5.4.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 588.0
SYD3_k127_8262851_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000613 558.0
SYD3_k127_8262851_3 SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 384.0
SYD3_k127_8262851_4 Stage II sporulation D domain protein K06381 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002459 374.0
SYD3_k127_8262851_6 endonuclease activity K07451 - - 0.0000000000000000000001868 102.0
SYD3_k127_8271247_0 iron-sulfur binding K00184 - - 0.0 1392.0
SYD3_k127_8271247_1 Putative zinc-finger K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003811 435.0
SYD3_k127_8271247_2 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 406.0
SYD3_k127_8271247_3 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004234 372.0
SYD3_k127_8271247_4 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 363.0
SYD3_k127_8271247_5 Methyl-transferase K18912 - 1.14.99.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 333.0
SYD3_k127_8271247_6 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000001774 203.0
SYD3_k127_8271247_7 FKBP-type peptidyl-prolyl cis-trans isomerase K03772,K03773 - 5.2.1.8 0.0000000000000000000000000000000000000002465 173.0
SYD3_k127_8271247_9 Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000001356 128.0
SYD3_k127_8272294_0 May be involved in recombinational repair of damaged DNA K03631 - - 9.672e-281 873.0
SYD3_k127_8272294_1 AAA C-terminal domain K07478 - - 1.503e-236 743.0
SYD3_k127_8272294_2 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 544.0
SYD3_k127_8272294_3 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 456.0
SYD3_k127_8272294_4 Belongs to the heat shock protein 70 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 379.0
SYD3_k127_8272294_5 protein phosphatase 2C domain protein K01090,K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004847 391.0
SYD3_k127_8272294_6 Bacterial capsule synthesis protein PGA_cap - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007134 338.0
SYD3_k127_8272294_7 - - - - 0.000000004585 66.0
SYD3_k127_8272489_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0 1521.0
SYD3_k127_8272489_1 Surface antigen - - - 0.0 1225.0
SYD3_k127_8272489_10 Biopolymer transport protein ExbD/TolR K03560 - - 0.0000000000000000000000000000000000000000000000000000000000000000004716 242.0
SYD3_k127_8272489_11 TonB C terminal K03646,K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000001161 240.0
SYD3_k127_8272489_13 - - - - 0.0000000000000000000000003727 104.0
SYD3_k127_8272489_2 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 2.01e-207 652.0
SYD3_k127_8272489_3 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006378 523.0
SYD3_k127_8272489_4 Ppx GppA K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006515 428.0
SYD3_k127_8272489_5 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 427.0
SYD3_k127_8272489_6 MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 413.0
SYD3_k127_8272489_7 haloacid dehalogenase-like hydrolase K08966 - 3.1.3.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 341.0
SYD3_k127_8272489_8 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 327.0
SYD3_k127_8272489_9 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001715 278.0
SYD3_k127_8280978_0 MerR, DNA binding K19591 - - 0.000000000000000000000000000000000000002633 148.0
SYD3_k127_8281148_0 4Fe-4S dicluster domain K18930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005868 582.0
SYD3_k127_8282460_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1268.0
SYD3_k127_8282460_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 475.0
SYD3_k127_8282460_2 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 330.0
SYD3_k127_8282460_3 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004729 267.0
SYD3_k127_8282460_4 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000003606 246.0
SYD3_k127_8290207_0 Domain present in PSD-95, Dlg, and ZO-1/2. K02452 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 484.0
SYD3_k127_8290207_1 response regulator K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 399.0
SYD3_k127_8291615_0 membrane organization K03641 - - 0.0 1558.0
SYD3_k127_8291615_1 Serine Threonine protein kinase K12132 - 2.7.11.1 2.9e-322 1014.0
SYD3_k127_8291615_10 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002755 365.0
SYD3_k127_8291615_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000392 316.0
SYD3_k127_8291615_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003096 301.0
SYD3_k127_8291615_14 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000004051 255.0
SYD3_k127_8291615_15 polysaccharide export K01991 - - 0.0000000000000000000000000000000000000000000000000000000000004 216.0
SYD3_k127_8291615_17 Protein conserved in bacteria K09986 - - 0.00000000000000000000000000000000000000000000000000000001832 211.0
SYD3_k127_8291615_19 PBP superfamily domain K02040 - - 0.000000000000000000000000000000000000000000000000000002694 205.0
SYD3_k127_8291615_2 Belongs to the CinA family K03742,K03743 - 3.5.1.42 1.884e-219 687.0
SYD3_k127_8291615_20 PFAM Glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.000000000000000000000000000000000000000000000001525 190.0
SYD3_k127_8291615_21 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000005118 168.0
SYD3_k127_8291615_23 TPR repeat - - - 0.00000000000000000000000000000000001658 156.0
SYD3_k127_8291615_24 - - - - 0.00000000000000000000001202 118.0
SYD3_k127_8291615_25 response to acidic pH K08996 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009268,GO:0009628,GO:0010447,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.00000000000000000116 98.0
SYD3_k127_8291615_26 Kelch motif - - - 0.0000000000000000927 96.0
SYD3_k127_8291615_27 PFAM Bacterial pre-peptidase C-terminal domain - - - 0.0000000000000001312 95.0
SYD3_k127_8291615_29 Pkd domain containing protein K12567 - 2.7.11.1 0.0000001285 65.0
SYD3_k127_8291615_3 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 3.59e-217 714.0
SYD3_k127_8291615_4 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003787 589.0
SYD3_k127_8291615_5 Threonine aldolase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 533.0
SYD3_k127_8291615_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 524.0
SYD3_k127_8291615_7 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000574 438.0
SYD3_k127_8291615_8 peptidase M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 409.0
SYD3_k127_8291615_9 TIGRFAM cytochrome C family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 387.0
SYD3_k127_8292194_0 Diguanylate cyclase, GGDEF domain - - - 0.0 1399.0
SYD3_k127_8292194_1 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007163 352.0
SYD3_k127_8292194_2 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 354.0
SYD3_k127_8292194_3 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 312.0
SYD3_k127_8292194_4 GTP-binding protein K06207 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 284.0
SYD3_k127_8292194_5 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 - 2.7.8.41 0.0000000000000000000000000000000000000000000000000000000000000000000000001298 253.0
SYD3_k127_8292194_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000003694 229.0
SYD3_k127_8315414_0 heat shock protein 70 K04043 - - 1.183e-318 1001.0
SYD3_k127_8315414_1 acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 1.981e-200 630.0
SYD3_k127_8315414_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 526.0
SYD3_k127_8315414_3 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005521 394.0
SYD3_k127_8315414_4 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005577 383.0
SYD3_k127_8322898_0 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007534 536.0
SYD3_k127_8322898_1 Type II secretion system (T2SS), protein F K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009756 485.0
SYD3_k127_8322898_2 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 471.0
SYD3_k127_8369926_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0 1099.0
SYD3_k127_8369926_1 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 463.0
SYD3_k127_8380716_0 Exonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 331.0
SYD3_k127_8380716_2 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005806 273.0
SYD3_k127_8380716_3 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001372 260.0
SYD3_k127_8380716_4 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000007929 164.0
SYD3_k127_840490_0 synthase K01858 - 5.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 590.0
SYD3_k127_840490_1 Asparagine synthase K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 430.0
SYD3_k127_840490_3 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 376.0
SYD3_k127_840490_4 domain protein K21029,K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 352.0
SYD3_k127_840490_5 Catalyzes the synthesis of activated sulfate K00390,K00860 - 1.8.4.10,1.8.4.8,2.7.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003328 335.0
SYD3_k127_840490_6 Involved in molybdopterin and thiamine biosynthesis, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 314.0
SYD3_k127_840490_7 Belongs to the sulfur carrier protein TusA family - - - 0.0000000000000000000000000000000000000000000003301 170.0
SYD3_k127_840490_8 Belongs to the sulfur carrier protein TusA family - - - 0.00000000000000000001157 107.0
SYD3_k127_8420574_0 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 1.799e-201 637.0
SYD3_k127_8420574_1 VWA domain containing CoxE-like protein K07161 - - 1.825e-200 633.0
SYD3_k127_8420574_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 574.0
SYD3_k127_8420574_3 Coenzyme A transferase K01029 - 2.8.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004692 385.0
SYD3_k127_8420574_4 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009831 351.0
SYD3_k127_8420574_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006919 269.0
SYD3_k127_8420574_6 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000005355 183.0
SYD3_k127_8420574_7 PilZ domain K02676 - - 0.00000000000000000000000000000000000000000000005096 187.0
SYD3_k127_8420574_8 Methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000003925 160.0
SYD3_k127_8422631_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004174 404.0
SYD3_k127_8422631_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000009023 181.0
SYD3_k127_8424152_0 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 448.0
SYD3_k127_8424152_1 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008188 375.0
SYD3_k127_8424152_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000000002768 257.0
SYD3_k127_8424152_3 Sterol carrier protein - - - 0.00000000000000000000000000000000000000000000009501 182.0
SYD3_k127_8424152_5 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.00000000000000000005255 89.0
SYD3_k127_8424152_6 - - - - 0.000002799 57.0
SYD3_k127_8437031_0 TonB dependent receptor K02014 - - 1.868e-200 650.0
SYD3_k127_8437031_1 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008657 595.0
SYD3_k127_8437031_2 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000000000000000000000000000000000000000000000003083 228.0
SYD3_k127_8437031_3 4 iron, 4 sulfur cluster binding K02574 - - 0.0000000000000000000000000000000000000000000000000006232 202.0
SYD3_k127_8437031_5 ABC transporter K02003 - - 0.0005682 49.0
SYD3_k127_8452530_0 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 439.0
SYD3_k127_8452530_1 Acid phosphatase homologues K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 293.0
SYD3_k127_8452530_2 Predicted membrane protein (DUF2238) K08984 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008905 299.0
SYD3_k127_8452530_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000521 203.0
SYD3_k127_8452530_4 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000008727 169.0
SYD3_k127_8452530_5 cysteine-type peptidase activity K21471,K21473,K21687 - - 0.000000000000000000000000000000000000000000001561 186.0
SYD3_k127_8452530_6 DNA-templated transcription, initiation K03088,K11333 - 1.3.7.14,1.3.7.15 0.00000000000000000000000000000000000000005354 168.0
SYD3_k127_8458187_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000009306 138.0
SYD3_k127_8458187_1 Amidohydrolase family K01468 - 3.5.2.7 0.0004082 44.0
SYD3_k127_8496236_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 602.0
SYD3_k127_8496236_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007959 390.0
SYD3_k127_8496236_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 390.0
SYD3_k127_8496236_3 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005555 332.0
SYD3_k127_8496236_4 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005234 315.0
SYD3_k127_8496236_5 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004648 318.0
SYD3_k127_8496236_6 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007589 306.0
SYD3_k127_8496236_7 DJ-1/PfpI family K05520 - 3.5.1.124 0.00000000000007114 78.0
SYD3_k127_8496564_0 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 452.0
SYD3_k127_8496564_1 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 347.0
SYD3_k127_8496564_2 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000003747 202.0
SYD3_k127_8503176_0 COG1233 Phytoene dehydrogenase and related proteins - - - 3.543e-291 906.0
SYD3_k127_8503176_1 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006688 607.0
SYD3_k127_8503176_2 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 381.0
SYD3_k127_8503176_3 PFAM ABC transporter K05847 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 333.0
SYD3_k127_8503176_4 Protein of unknown function (DUF421) - - - 0.0000000000000000000000000000001423 129.0
SYD3_k127_8503176_6 SMART Rhodanese domain protein - - - 0.0000001316 53.0
SYD3_k127_8514434_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370,K17050 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009898,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0031235,GO:0032991,GO:0042126,GO:0043436,GO:0043546,GO:0044237,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0048037,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0097159,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:0098803,GO:1901363,GO:1902494,GO:1990204,GO:2001057 1.7.5.1 0.00000000000000000000000000000000000000000000000000000000000006661 234.0
SYD3_k127_8514434_1 Cytochrome c - - - 0.000000000000000000000000000005919 134.0
SYD3_k127_8527282_0 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 508.0
SYD3_k127_8527282_1 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006402 460.0
SYD3_k127_8527282_2 TIGRFAM CoA-substrate-specific enzyme activase - - - 0.000000000000000000000000000000000000000000000000000000000005738 231.0
SYD3_k127_8527282_3 TIGRFAM CoA-substrate-specific enzyme activase - - - 0.00000000000000000000000000000008463 129.0
SYD3_k127_8558838_0 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 8.606e-280 871.0
SYD3_k127_8558838_1 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 0.000000000000000000003798 100.0
SYD3_k127_8564159_0 RecQ zinc-binding K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004797 361.0
SYD3_k127_8564159_1 chorismate mutase K04782 - 4.2.99.21 0.000004066 54.0
SYD3_k127_8565530_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01835 - 5.4.2.2 1.935e-307 947.0
SYD3_k127_8565530_1 Molybdopterin oxidoreductase Fe4S4 domain - - - 2.445e-281 901.0
SYD3_k127_8565530_2 cytochrome oxidase assembly K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003981 442.0
SYD3_k127_8565530_3 Phosphodiester glycosidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006497 392.0
SYD3_k127_8565530_4 COG0437 Fe-S-cluster-containing hydrogenase components 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001072 287.0
SYD3_k127_8565530_5 Polysulphide reductase, NrfD K08359 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003366 300.0
SYD3_k127_8565530_6 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000002311 208.0
SYD3_k127_8565530_7 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0000000001189 67.0
SYD3_k127_85856_0 Transcriptional regulator - - - 0.0 1021.0
SYD3_k127_85856_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 2.514e-287 917.0
SYD3_k127_85856_10 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000103 298.0
SYD3_k127_85856_2 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 5.416e-250 777.0
SYD3_k127_85856_3 serine threonine protein kinase K08884,K12132 - 2.7.11.1 1.938e-240 758.0
SYD3_k127_85856_4 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 3.431e-228 709.0
SYD3_k127_85856_5 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009381 463.0
SYD3_k127_85856_6 desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008353 458.0
SYD3_k127_85856_7 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 460.0
SYD3_k127_85856_8 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003375 407.0
SYD3_k127_85856_9 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008525 408.0
SYD3_k127_8591091_0 PFAM Multi antimicrobial extrusion protein MatE K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 351.0
SYD3_k127_8591091_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008152 284.0
SYD3_k127_8591091_2 AntiSigma factor K03088 - - 0.000000000000000000000000000000000105 146.0
SYD3_k127_8598464_0 Domain of unknown function (DUF4091) - - - 2.508e-247 773.0
SYD3_k127_8598464_1 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008266 574.0
SYD3_k127_8598464_2 Protein of unknown function (DUF507) K09804 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004955 326.0
SYD3_k127_8600704_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004379 622.0
SYD3_k127_8600704_1 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008904 574.0
SYD3_k127_8600704_10 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000001722 70.0
SYD3_k127_8600704_11 - - - - 0.0002166 52.0
SYD3_k127_8600704_2 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 586.0
SYD3_k127_8600704_3 COG0618 Exopolyphosphatase-related proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 540.0
SYD3_k127_8600704_4 Zincin-like metallopeptidase K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008334 488.0
SYD3_k127_8600704_5 SIR2-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 478.0
SYD3_k127_8600704_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 429.0
SYD3_k127_8600704_7 transcriptional regulator K09017,K18301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 296.0
SYD3_k127_8600704_8 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000000000000004402 243.0
SYD3_k127_8600704_9 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002193 233.0
SYD3_k127_8615816_0 Crp-like helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008126 418.0
SYD3_k127_8615816_1 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.00000000000000000000007507 102.0
SYD3_k127_8615816_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000009011 93.0
SYD3_k127_861612_0 Phosphoenolpyruvate carboxylase K01595 - 4.1.1.31 3.447e-284 900.0
SYD3_k127_861612_1 Belongs to the FPP GGPP synthase family K00805,K02523 - 2.5.1.30,2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002593 541.0
SYD3_k127_861612_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 459.0
SYD3_k127_861612_3 Belongs to the glycosyl hydrolase 5 (cellulase A) family K19355 - 3.2.1.78 0.00000000000000000000000000000000000000000000000001856 183.0
SYD3_k127_8631572_0 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004512 389.0
SYD3_k127_8631572_1 CoA-substrate-specific enzyme activase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 342.0
SYD3_k127_8631572_2 Serine Threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 340.0
SYD3_k127_8631572_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000001034 250.0
SYD3_k127_8631572_5 DNA-templated transcription, initiation K03088,K11333 - 1.3.7.14,1.3.7.15 0.0000000000000000000000000000000000000000000001681 175.0
SYD3_k127_8632361_0 Sodium/hydrogen exchanger family K03455 - - 3.132e-228 726.0
SYD3_k127_8632361_1 Surface antigen K07278 - - 0.00000000000000000000000000000000000000000000000000000000000000002743 247.0
SYD3_k127_8632361_2 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000000000000000000000000000000000001367 252.0
SYD3_k127_8632361_3 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0002798 43.0
SYD3_k127_8642875_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 2.316e-306 945.0
SYD3_k127_8642875_1 Peptidase, M61 - - - 3.103e-285 887.0
SYD3_k127_8642875_10 RDD family K18481 - - 0.000000000000000000000000000000000000000000000000000000009086 203.0
SYD3_k127_8642875_11 Uncharacterized conserved protein (DUF2203) - - - 0.0000000000000000000000000000000000000000000000000000009084 196.0
SYD3_k127_8642875_13 PFAM Hemerythrin HHE cation binding domain K07216 - - 0.00000000000000000000000000000009792 128.0
SYD3_k127_8642875_14 cheY-homologous receiver domain - - - 0.0000000000000000000001829 115.0
SYD3_k127_8642875_15 phosphorelay signal transduction system - - - 0.00000000000000000009342 98.0
SYD3_k127_8642875_17 Serine aminopeptidase, S33 K16050 - 3.7.1.17 0.000000000000001217 87.0
SYD3_k127_8642875_18 - - - - 0.00003742 56.0
SYD3_k127_8642875_19 Helix-turn-helix domain - - - 0.0004631 45.0
SYD3_k127_8642875_2 GMC oxidoreductase K03333 - 1.1.3.6 4.557e-229 724.0
SYD3_k127_8642875_3 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 2.442e-224 703.0
SYD3_k127_8642875_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 556.0
SYD3_k127_8642875_5 alcohol dehydrogenase K18012 - 1.4.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 524.0
SYD3_k127_8642875_6 TIGRFAM cytochrome C family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 431.0
SYD3_k127_8642875_7 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009632 384.0
SYD3_k127_8642875_8 Memo-like protein K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008253 357.0
SYD3_k127_8642875_9 Phage integrase family K07497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 304.0
SYD3_k127_8652933_0 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00627,K00658 - 2.3.1.12,2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 419.0
SYD3_k127_8652933_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 423.0
SYD3_k127_8652933_2 EamA-like transporter family - - - 0.000000000000149 72.0
SYD3_k127_8666558_0 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 483.0
SYD3_k127_8666558_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533 - 3.6.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008789 463.0
SYD3_k127_8666558_2 lytic transglycosylase activity - - - 0.000000000000000000000000000000000000001183 156.0
SYD3_k127_87188_0 homoserine dehydrogenase K00003 - 1.1.1.3 2.193e-230 729.0
SYD3_k127_87188_1 Transporter associated domain K03699 - - 1.353e-203 643.0
SYD3_k127_87188_10 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000007987 257.0
SYD3_k127_87188_11 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000000000009591 259.0
SYD3_k127_87188_12 deoxyhypusine monooxygenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000004409 265.0
SYD3_k127_87188_13 negative regulation of translational initiation - - - 0.00000000000000000000000000000000000000000000000000000000000005341 225.0
SYD3_k127_87188_14 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000000000000000029 203.0
SYD3_k127_87188_15 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000005001 111.0
SYD3_k127_87188_2 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 4.584e-195 616.0
SYD3_k127_87188_3 HB1, ASXL, restriction endonuclease HTH domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 644.0
SYD3_k127_87188_4 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 557.0
SYD3_k127_87188_5 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 552.0
SYD3_k127_87188_6 pfkB family carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006153 539.0
SYD3_k127_87188_7 Diadenosine tetraphosphatase and related serine threonine protein phosphatases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 436.0
SYD3_k127_87188_8 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002306 276.0
SYD3_k127_8739203_0 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 362.0
SYD3_k127_8739203_1 Belongs to the ClpA ClpB family K03694 - - 0.000000000000000000000000000000000000000000000000000000000009247 230.0
SYD3_k127_8739203_2 Methyl-transferase K18912 - 1.14.99.50 0.0000000000000000000000000000000000000000000000000000000000251 207.0
SYD3_k127_8739203_3 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000000000000000000004481 186.0
SYD3_k127_8757993_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 6.069e-294 925.0
SYD3_k127_8757993_1 Transcriptional regulator, CarD family K07736 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006011 316.0
SYD3_k127_8757993_3 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000008473 103.0
SYD3_k127_8781138_0 Protein of unknown function, DUF255 K06888 - - 7.506e-256 796.0
SYD3_k127_8781138_1 ubiquinol oxidase subunit I K00425 - 1.10.3.14 2.322e-203 644.0
SYD3_k127_8781138_2 oxidase, subunit K00426 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003393 483.0
SYD3_k127_8781138_3 - - - - 0.000000000000000000000000000000004478 132.0
SYD3_k127_8781138_4 - - - - 0.000000000000000000006024 96.0
SYD3_k127_878248_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000763 280.0
SYD3_k127_878248_1 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00000000000000000000000000000001925 132.0
SYD3_k127_878248_2 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.00000000000006336 78.0
SYD3_k127_878248_3 FAD linked oxidase domain protein - - - 0.000003635 50.0
SYD3_k127_8784830_0 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 390.0
SYD3_k127_8815363_0 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 320.0
SYD3_k127_8815363_1 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 343.0
SYD3_k127_884730_0 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004109 526.0
SYD3_k127_884730_1 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 363.0
SYD3_k127_884730_2 PTS system K02795 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000743 316.0
SYD3_k127_884730_3 PFAM PTS system sorbose subfamily IIB component K02794 - 2.7.1.191 0.000000000000000000000000000000000000000000000000000000000001573 215.0
SYD3_k127_884730_4 PFAM PTS system fructose subfamily IIA component K02793 - 2.7.1.191 0.00000000000000000000000000000000000000000000000000000001354 203.0
SYD3_k127_884730_5 PFAM PTS system mannose fructose sorbose family IID component K02796 - - 0.0000000002588 70.0
SYD3_k127_8873714_0 heme binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 445.0
SYD3_k127_8873714_1 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.000000000000000008082 82.0
SYD3_k127_8954603_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1553.0
SYD3_k127_8954603_1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 3.231e-255 819.0
SYD3_k127_8954603_10 positive regulation of macromolecule biosynthetic process K03973 - - 0.0000000000000000000000000000000000002778 159.0
SYD3_k127_8954603_2 Proton-conducting membrane transporter K12141 - - 1.836e-252 797.0
SYD3_k127_8954603_3 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 1.372e-242 761.0
SYD3_k127_8954603_4 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 406.0
SYD3_k127_8954603_5 hydrogenase 4 membrane K12140 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 367.0
SYD3_k127_8954603_6 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009486 314.0
SYD3_k127_8954603_7 FR47-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002626 243.0
SYD3_k127_8954603_8 SprB repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000008054 244.0
SYD3_k127_8954603_9 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000004452 167.0
SYD3_k127_8964160_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 325.0
SYD3_k127_8997874_0 Domain of unknown function (DUF4105) - - - 1.04e-249 798.0
SYD3_k127_8997874_1 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 379.0
SYD3_k127_8997874_2 Belongs to the acetokinase family K00929 - 2.7.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007922 332.0
SYD3_k127_8997874_3 Protein of unknown function (DUF3015) - - - 0.000000000000000000000000000000000000000000000000000000000000000008048 231.0
SYD3_k127_8997874_5 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000002972 136.0
SYD3_k127_9018267_0 Biotin carboxylase C-terminal domain K01941,K01961 - 6.3.4.14,6.3.4.6,6.4.1.2 5.571e-254 797.0
SYD3_k127_9018267_1 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009357 493.0
SYD3_k127_9018267_2 Biotin-requiring enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000003683 232.0
SYD3_k127_9018267_3 Histidine kinase - - - 0.000000001476 61.0
SYD3_k127_9039127_0 Sigma-54 interaction domain K02481,K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 391.0
SYD3_k127_9039127_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000359 321.0
SYD3_k127_9039127_2 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000008504 188.0
SYD3_k127_9039127_3 PFAM NHL repeat containing protein - - - 0.00000000000000000000000000000000000001152 158.0
SYD3_k127_9039127_4 PFAM ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000004617 163.0
SYD3_k127_9039127_5 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000009042 99.0
SYD3_k127_9039127_6 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000118 91.0
SYD3_k127_9045890_0 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 386.0
SYD3_k127_9045890_1 succinyl-diaminopimelate desuccinylase K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000009433 256.0
SYD3_k127_9045890_2 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000002805 237.0
SYD3_k127_9045890_3 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000000000000000000002442 242.0
SYD3_k127_9045890_5 peptidyl-tyrosine sulfation - - - 0.0000001273 55.0
SYD3_k127_9080387_0 Peptidase family M13 K01415,K07386 - 3.4.24.71 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 439.0
SYD3_k127_9080387_1 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000002435 231.0
SYD3_k127_9080387_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.000000000000000005315 93.0
SYD3_k127_9081167_0 ATPase, P-type transporting, HAD superfamily, subfamily IC K01537 - 3.6.3.8 2.323e-279 891.0
SYD3_k127_9081167_1 PFAM Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 291.0
SYD3_k127_9081167_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005729 296.0
SYD3_k127_9081167_4 Histidine kinase - - - 0.00000000000000003192 87.0
SYD3_k127_9081167_5 - - - - 0.0000008326 63.0
SYD3_k127_9084593_0 CHAT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 349.0
SYD3_k127_9089337_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 8.474e-218 679.0
SYD3_k127_9089337_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000004842 81.0
SYD3_k127_9100619_0 Similarity to COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains(Evalue K21405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 317.0
SYD3_k127_9105846_0 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501 309.0
SYD3_k127_9105846_1 R3H domain K06346 - - 0.00000000000000000000000000000000000000000000000000000000000000000007756 234.0
SYD3_k127_9118049_0 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004137 416.0
SYD3_k127_9118049_1 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 313.0
SYD3_k127_9118049_2 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000002793 195.0
SYD3_k127_9153062_0 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0 1680.0
SYD3_k127_9153062_1 Glucose / Sorbosone dehydrogenase K21430 - - 1.955e-211 672.0
SYD3_k127_9153062_2 PFAM Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 554.0
SYD3_k127_9153062_3 Cation transport protein K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 322.0
SYD3_k127_9153062_4 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000009827 213.0
SYD3_k127_9153062_5 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.0000000000000000000000000000000002954 134.0
SYD3_k127_9153062_6 TrkA-N domain K03499 - - 0.00000000000000000000000000006074 136.0
SYD3_k127_916865_0 Domain of Unknown Function (DUF748) - - - 0.0 1297.0
SYD3_k127_916865_1 Winged helix DNA-binding domain K09927 - - 2.944e-230 716.0
SYD3_k127_916865_2 COG2513 PEP phosphonomutase and related enzymes K03417 - 4.1.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 325.0
SYD3_k127_916865_3 NAD(P)H-binding - - - 0.0000000000000000000000000000000000000000000000000002297 192.0
SYD3_k127_916865_4 SNARE associated Golgi protein K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000001045 174.0
SYD3_k127_916865_5 - - - - 0.000000000000000000000000000000000000000002116 164.0
SYD3_k127_916865_6 Cys Met metabolism K01739,K01758,K01760,K01761 - 2.5.1.48,4.4.1.1,4.4.1.11,4.4.1.8 0.0000000000000000000005558 95.0
SYD3_k127_9187868_0 Belongs to the RimK family K05844,K14940 - 6.3.2.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006565 519.0
SYD3_k127_9187868_1 protein disulfide oxidoreductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007565 288.0
SYD3_k127_9187868_2 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.00000000000000000000000000000000000000000000000004863 179.0
SYD3_k127_9192072_0 Histidine kinase K15011 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 550.0
SYD3_k127_9192072_1 nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 510.0
SYD3_k127_9192072_2 response regulator K15012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 331.0
SYD3_k127_9192072_3 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553,K14160 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000007189 237.0
SYD3_k127_9192072_4 Thioredoxin K03671 - - 0.0000000000000000000000000000000000000000000000000000000000001428 222.0
SYD3_k127_9192072_5 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - 0.00000000000000000000000002758 123.0
SYD3_k127_9262292_0 Aerotolerance regulator N-terminal - - - 0.0 1017.0
SYD3_k127_9262292_1 phosphorelay signal transduction system - - - 2.933e-209 657.0
SYD3_k127_9262292_2 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004099 587.0
SYD3_k127_9262292_3 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 557.0
SYD3_k127_9262292_4 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003071 479.0
SYD3_k127_9262292_5 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 452.0
SYD3_k127_9262292_6 amino acid ABC transporter, ATP-binding protein K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 445.0
SYD3_k127_9262292_7 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005637 379.0
SYD3_k127_9262292_8 thiolester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 387.0
SYD3_k127_9262292_9 Uncharacterized protein conserved in bacteria (DUF2332) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 331.0
SYD3_k127_9289792_0 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 8.428e-199 651.0
SYD3_k127_9289792_1 Catalyzes the formation of acetoacetate from 3-hydroxybutyrate K00019 - 1.1.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000465 317.0
SYD3_k127_9289792_2 Protein of unknown function (DUF2470) K07226 - - 0.00000000000000000000000000000000000000000000000436 182.0
SYD3_k127_9289792_3 histone H2A K63-linked ubiquitination K02283 - - 0.000000000000000000000000000000000000000000003291 167.0
SYD3_k127_9289792_4 Domain of unknown function (DUF4142) K08995 - - 0.000000000000000000000000000000000001144 159.0
SYD3_k127_9289792_5 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0005997 43.0
SYD3_k127_929553_0 helicase - - - 7.517e-302 939.0
SYD3_k127_9301211_0 Histidine ammonia-lyase K01745 - 4.3.1.3 1.264e-258 823.0
SYD3_k127_9301211_1 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 1.142e-243 784.0
SYD3_k127_9301211_10 PFAM Sulfate transporter antisigma-factor antagonist STAS K17762 - - 0.0000000000000000000000000000000000000003575 154.0
SYD3_k127_9301211_11 Helix-hairpin-helix motif K02237 - - 0.00000000000000000000000000000000000003175 157.0
SYD3_k127_9301211_12 Histidine kinase-like ATPases K17752 - 2.7.11.1 0.0000000000000000000000000000006875 135.0
SYD3_k127_9301211_14 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.000000000000000000005386 108.0
SYD3_k127_9301211_2 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004832 586.0
SYD3_k127_9301211_3 involved in molybdopterin and THIamine biosynthesis family 1 K03148,K21029,K22132 GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016829,GO:0016835,GO:0016836,GO:0030955,GO:0031402,GO:0031420,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0061503,GO:0061504,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.7.7.73,2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 403.0
SYD3_k127_9301211_4 STAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 353.0
SYD3_k127_9301211_5 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 312.0
SYD3_k127_9301211_6 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000001901 247.0
SYD3_k127_9301211_7 Stage II sporulation protein E K05518 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000124 213.0
SYD3_k127_9301211_8 Histidine kinase-like ATPases K17752 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000001869 189.0
SYD3_k127_9301211_9 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000001513 153.0
SYD3_k127_9305749_0 UDP-N-acetylglucosamine 2-epimerase activity K01791,K13019,K18429 GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016787,GO:0016798,GO:0044238,GO:0071704,GO:1901576 3.2.1.184,5.1.3.14,5.1.3.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000415 312.0
SYD3_k127_934603_0 HAMP domain K02482 - 2.7.13.3 2.257e-235 739.0
SYD3_k127_934603_1 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 581.0
SYD3_k127_934603_2 Protein of unknown function (DUF1054) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 314.0
SYD3_k127_934603_4 regulation of single-species biofilm formation K13572,K13573 - - 0.00000000002138 66.0
SYD3_k127_935883_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 7.818e-213 665.0
SYD3_k127_935883_2 TAP-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031 386.0
SYD3_k127_935883_3 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 336.0
SYD3_k127_935883_5 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008662 252.0
SYD3_k127_935883_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001169 268.0
SYD3_k127_9444478_0 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001131 282.0
SYD3_k127_9444478_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000007194 91.0
SYD3_k127_9452097_0 Belongs to the glycosyl hydrolase 57 family - - - 0.0 1214.0
SYD3_k127_9452097_1 Curli production assembly/transport component CsgG - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004816 440.0
SYD3_k127_9452097_2 Phosphomethylpyrimidine kinase K00941,K14153,K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 408.0
SYD3_k127_9452097_3 Putative bacterial lipoprotein (DUF799) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001065 274.0
SYD3_k127_9452097_4 DUF218 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004615 259.0
SYD3_k127_9452097_5 Multicopper oxidase K22350 - 1.16.3.3 0.000000000000000000000000000000000000000000000000000002362 199.0
SYD3_k127_9452097_6 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000000000000000001112 165.0
SYD3_k127_9452097_7 Domain of unknown function (DUF4810) - - - 0.00000000000000000000000000000006616 135.0
SYD3_k127_9452097_8 - - - - 0.000000000000000000000001303 117.0
SYD3_k127_9515867_0 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit K01844 - 5.4.3.3 8.964e-298 918.0
SYD3_k127_9515867_1 Ammonium Transporter K03320 - - 2.281e-214 684.0
SYD3_k127_9515867_10 Belongs to the bacterial histone-like protein family K03530 - - 0.00000000000000000000000000000000000000000001337 163.0
SYD3_k127_9515867_2 Pfam:Kce K18013 - 2.3.1.247 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004839 467.0
SYD3_k127_9515867_3 Dimerisation domain of d-ornithine 4,5-aminomutase K18011 - 5.4.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009785 425.0
SYD3_k127_9515867_4 SMART Elongator protein 3 MiaB NifB K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003159 375.0
SYD3_k127_9515867_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 371.0
SYD3_k127_9515867_7 PGAP1-like protein K01046 - 3.1.1.3 0.0000000000000000000000000000000000000000000000000000000000001218 227.0
SYD3_k127_9515867_8 Thioesterase superfamily K18014 - 4.3.1.14 0.00000000000000000000000000000000000000000000000000000004265 217.0
SYD3_k127_9522093_0 D-alanyl-D-alanine carboxypeptidase K07259 - 3.4.16.4 4.7e-295 923.0
SYD3_k127_9522093_1 N-6 DNA Methylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 395.0
SYD3_k127_9522093_2 Ferric uptake regulator family K03711 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003415 258.0
SYD3_k127_9522093_3 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000009059 209.0
SYD3_k127_9533600_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 317.0
SYD3_k127_9533600_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.00000434 59.0
SYD3_k127_9553879_0 Peptidase M1 membrane alanine aminopeptidase K01256,K08776 - 3.4.11.2 0.0 1272.0
SYD3_k127_9553879_1 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005921 516.0
SYD3_k127_9553879_2 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000000000000000000000000000000001889 201.0
SYD3_k127_9553879_3 Major Facilitator Superfamily K08218 - - 0.000000000000000000000000000000001465 152.0
SYD3_k127_9564211_0 MMPL family K03296,K18138 - - 0.0 1567.0
SYD3_k127_9564211_1 PFAM NADH Ubiquinone plastoquinone (complex I) K05568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006904 564.0
SYD3_k127_9564211_10 COG1006 Multisubunit Na H antiporter, MnhC subunit K05567 - - 0.0000000000000000000000000000006546 131.0
SYD3_k127_9564211_11 Na+/H+ ion antiporter subunit K05562,K05569 - - 0.0000000000000000000000000003127 132.0
SYD3_k127_9564211_12 Universal stress protein family - - - 0.00000000000000000000004368 111.0
SYD3_k127_9564211_13 Belongs to the universal stress protein A family - - - 0.0000000000000000000001695 115.0
SYD3_k127_9564211_14 Na+/H+ antiporter subunit K05564 - - 0.00000000000000007996 91.0
SYD3_k127_9564211_15 COG1538 Outer membrane protein K18139 - - 0.0000000000000005364 80.0
SYD3_k127_9564211_16 Multiple resistance and pH regulation protein F (MrpF / PhaF) K05570 - - 0.0000000000007194 79.0
SYD3_k127_9564211_17 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000007465 57.0
SYD3_k127_9564211_2 Domain of unknown function (DUF4040) K05559,K05565 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004212 542.0
SYD3_k127_9564211_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 525.0
SYD3_k127_9564211_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 458.0
SYD3_k127_9564211_5 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006598 300.0
SYD3_k127_9564211_6 Glyoxalase-like domain K07032 - - 0.0000000000000000000000000000000000000000001504 177.0
SYD3_k127_9564211_7 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.000000000000000000000000000000000000000005993 166.0
SYD3_k127_9564211_8 Na H antiporter, MnhB K05566 - - 0.00000000000000000000000000000002434 130.0
SYD3_k127_9566983_0 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000835 364.0
SYD3_k127_9566983_1 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 351.0
SYD3_k127_9566983_2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007672 341.0
SYD3_k127_9566983_3 MerR, DNA binding K19591 - - 0.00000000000000000000000000000000000000000000000000000000282 200.0
SYD3_k127_9574431_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1447.0
SYD3_k127_9574431_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1058.0
SYD3_k127_9574431_2 DNA polymerase III, delta' K02340 - 2.7.7.7 3.018e-196 633.0
SYD3_k127_9574431_3 Acetyl-CoA hydrolase/transferase N-terminal domain K18288 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004246 397.0
SYD3_k127_9574431_5 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004123 356.0
SYD3_k127_9574431_6 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004203 270.0
SYD3_k127_9574431_7 PFAM DivIVA family protein K04074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008045 255.0
SYD3_k127_9574431_8 Forkhead associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007804 251.0
SYD3_k127_9574431_9 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000002602 232.0
SYD3_k127_9576126_0 - - - - 1.367e-228 713.0
SYD3_k127_9576126_1 ErfK YbiS YcfS YnhG family protein K16291 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 339.0
SYD3_k127_9576126_2 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000001415 213.0
SYD3_k127_9576126_3 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000002866 208.0
SYD3_k127_9576126_5 Lysin motif - - - 0.00000000000000000000000000000000000002363 147.0
SYD3_k127_9576126_6 Nucleotide pyrophosphohydrolase - - - 0.00000000000000000014 95.0
SYD3_k127_9576126_8 - - - - 0.000000000000162 75.0
SYD3_k127_9577835_0 RNA polymerase recycling family C-terminal K03580 - - 0.0 1416.0
SYD3_k127_9577835_1 Bacterial extracellular solute-binding protein K02027,K10236 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 552.0
SYD3_k127_9577835_10 response to copper ion K16915 - - 0.000000000000000003363 91.0
SYD3_k127_9577835_2 SMART Integrin alpha beta-propellor repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003347 519.0
SYD3_k127_9577835_3 Belongs to the ABC transporter superfamily K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 507.0
SYD3_k127_9577835_4 Binding-protein-dependent transport system inner membrane component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 423.0
SYD3_k127_9577835_5 Binding-protein-dependent transport system inner membrane component K02025,K10237 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 422.0
SYD3_k127_9577835_6 ABC transporter K02006,K16787 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009503 357.0
SYD3_k127_9577835_7 Cobalt uptake substrate-specific transmembrane region K02007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001478 250.0
SYD3_k127_9577835_9 Translation initiation factor SUI1 K03113 - - 0.000000000000000000000000000000003985 136.0
SYD3_k127_9584487_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004899 558.0
SYD3_k127_9584487_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005929 531.0
SYD3_k127_9584487_10 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000000000000004126 114.0
SYD3_k127_9584487_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 507.0
SYD3_k127_9584487_3 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004655 492.0
SYD3_k127_9584487_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 489.0
SYD3_k127_9584487_5 NapC/NirT cytochrome c family, N-terminal region K02569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 412.0
SYD3_k127_9584487_6 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 405.0
SYD3_k127_9584487_7 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008162 385.0
SYD3_k127_9584487_8 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 303.0
SYD3_k127_9584487_9 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.00000000000000000000000000000000005375 147.0
SYD3_k127_9586539_0 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009178 394.0
SYD3_k127_9586539_1 polysaccharide catabolic process K03478 - 3.5.1.105 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004754 307.0
SYD3_k127_9586539_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000001001 156.0
SYD3_k127_9587741_0 Periplasmic binding protein K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 383.0
SYD3_k127_9587741_1 PFAM AMP-dependent synthetase and ligase K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003499 388.0
SYD3_k127_9587741_2 PFAM ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005951 366.0
SYD3_k127_9587741_3 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000001022 211.0
SYD3_k127_9592998_0 Ribulose bisphosphate carboxylase large chain, catalytic domain - - - 4.524e-264 820.0
SYD3_k127_9592998_1 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009084 521.0
SYD3_k127_9592998_2 Phosphoribulokinase / Uridine kinase family K00855 - 2.7.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 480.0
SYD3_k127_9592998_3 Fructose-1-6-bisphosphatase, N-terminal domain K01086 - 3.1.3.11,3.1.3.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 449.0
SYD3_k127_9592998_4 CbbX protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 403.0
SYD3_k127_9592998_5 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005149 332.0
SYD3_k127_9592998_6 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 336.0
SYD3_k127_9592998_7 Ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.000000000000000000000000000000000000000000000000000002234 193.0
SYD3_k127_9592998_8 Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000001314 173.0
SYD3_k127_9597462_0 Stage II sporulation protein - - - 1.67e-235 741.0
SYD3_k127_9597462_1 Bacterial sugar transferase - - - 9.52e-233 730.0
SYD3_k127_9597462_10 Capsular exopolysaccharide family K08252 - 2.7.10.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 327.0
SYD3_k127_9597462_11 PFAM Polysaccharide export protein K01991 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004695 296.0
SYD3_k127_9597462_12 Penicillin amidase K01434 - 3.5.1.11 0.00000000000000000000000000000000000000000000000000007117 216.0
SYD3_k127_9597462_13 Rhodanese Homology Domain - - - 0.00000000000000000000000001421 116.0
SYD3_k127_9597462_2 Belongs to the DegT DnrJ EryC1 family - - - 4.078e-196 618.0
SYD3_k127_9597462_3 TIGRFAM polysaccharide chain length determinant protein, PEP-CTERM locus subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 580.0
SYD3_k127_9597462_4 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 595.0
SYD3_k127_9597462_5 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 558.0
SYD3_k127_9597462_6 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 421.0
SYD3_k127_9597462_7 Required for morphogenesis under gluconeogenic growth conditions - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 406.0
SYD3_k127_9597462_9 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009076 340.0
SYD3_k127_960973_0 Endoribonuclease that initiates mRNA decay K18682 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 420.0
SYD3_k127_960973_1 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000000004891 91.0
SYD3_k127_9610695_0 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004855 492.0
SYD3_k127_9610695_1 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 473.0
SYD3_k127_9610695_2 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 436.0
SYD3_k127_9610695_3 Domain of unknown function (DUF1732) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 424.0
SYD3_k127_9610695_4 PFAM glycosyl transferase family 9 K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 319.0
SYD3_k127_9610695_5 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 303.0
SYD3_k127_9610695_6 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005558 265.0
SYD3_k127_9610695_7 Belongs to the UPF0434 family K09791 - - 0.0000000000000000007072 96.0
SYD3_k127_9610695_8 - - - - 0.0000001519 55.0
SYD3_k127_9611506_0 - - - - 0.0 1032.0
SYD3_k127_9611506_1 Pfam:DUF955 K07110 - - 1.613e-227 709.0
SYD3_k127_9611506_2 - K07283 - - 0.000000000000000000000000000000000000000000000000000000000009752 237.0
SYD3_k127_9623080_0 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 515.0
SYD3_k127_9623080_1 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000727 440.0
SYD3_k127_9631504_0 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 1.215e-291 900.0
SYD3_k127_9631504_1 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576 2.9.1.1 4.578e-209 660.0
SYD3_k127_9631504_2 Transcriptional regulatory protein, C terminal K07658 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 409.0
SYD3_k127_9631504_3 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005078 273.0
SYD3_k127_9640808_0 Histidine kinase A domain protein - - - 0.0 1361.0
SYD3_k127_9642865_0 Alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000787 232.0
SYD3_k127_9642865_1 PFAM helix-turn-helix domain protein - - - 0.00000000000000000000000000000004973 126.0
SYD3_k127_9647269_0 Peptidase family M3 K01284 - 3.4.15.5 0.0 1126.0
SYD3_k127_9647269_1 PFAM Thiamine pyrophosphate K00175,K00187 - 1.2.7.11,1.2.7.3,1.2.7.7 2.337e-203 666.0
SYD3_k127_9647269_10 FecR protein - - - 0.00000000000000000000000000000000000002156 162.0
SYD3_k127_9647269_12 protein kinase activity K12132 - 2.7.11.1 0.00000002689 65.0
SYD3_k127_9647269_2 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 2.17e-196 629.0
SYD3_k127_9647269_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003641 501.0
SYD3_k127_9647269_4 signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 509.0
SYD3_k127_9647269_5 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 432.0
SYD3_k127_9647269_6 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003108 395.0
SYD3_k127_9647269_7 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004583 375.0
SYD3_k127_9647269_8 GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004397 258.0
SYD3_k127_9647269_9 Uncharacterized conserved protein (COG2071) K09166 - - 0.000000000000000000000000000000000000000000000000007979 192.0
SYD3_k127_9650243_0 7TM receptor with intracellular HD hydrolase K07037 - - 2.46e-316 1000.0
SYD3_k127_9650243_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 1.575e-240 764.0
SYD3_k127_9650243_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 540.0
SYD3_k127_9650243_3 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 430.0
SYD3_k127_9650243_4 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000000000000000000000000000000000000000000006874 252.0
SYD3_k127_9662160_0 CHASE - - - 4.124e-248 790.0
SYD3_k127_9662160_1 cluster binding protein K18929 - - 5.325e-207 697.0
SYD3_k127_9662160_10 Multicopper oxidase K06324 - 1.16.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000005733 277.0
SYD3_k127_9662160_11 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000000000000000000000000001524 164.0
SYD3_k127_9662160_12 LUD domain K00782 - - 0.0000000000000000000000000000000000004255 151.0
SYD3_k127_9662160_13 PFAM KWG Leptospira - - - 0.00000000000000000000000000000000001134 156.0
SYD3_k127_9662160_14 - - - - 0.0000000000000000006521 103.0
SYD3_k127_9662160_16 endonuclease activity K07451 - - 0.000008385 50.0
SYD3_k127_9662160_2 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 8.029e-195 625.0
SYD3_k127_9662160_3 PFAM transposase IS116 IS110 IS902 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 438.0
SYD3_k127_9662160_4 Dimerisation domain of Zinc Transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 408.0
SYD3_k127_9662160_5 PFAM Cysteine-rich domain K18928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005426 398.0
SYD3_k127_9662160_6 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00042 - 1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005012 404.0
SYD3_k127_9662160_7 Belongs to the hyi family K01816,K22131 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006082,GO:0008150,GO:0008152,GO:0008903,GO:0009987,GO:0016853,GO:0016860,GO:0016861,GO:0019752,GO:0032787,GO:0042802,GO:0042803,GO:0043436,GO:0044237,GO:0044281,GO:0046487,GO:0046983,GO:0071704 5.3.1.22,5.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 323.0
SYD3_k127_9662160_8 endonuclease activity K07451 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001954 274.0
SYD3_k127_9662160_9 Dtw domain containing protein K05812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003254 254.0
SYD3_k127_9687951_0 D-isomer specific 2-hydroxyacid dehydrogenase K00058,K16843 - 1.1.1.310,1.1.1.399,1.1.1.95 5.429e-269 835.0
SYD3_k127_9687951_1 lipopolysaccharide transport K04744 - - 3.256e-233 745.0
SYD3_k127_9687951_2 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006281 599.0
SYD3_k127_9687951_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 529.0
SYD3_k127_9687951_4 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 453.0
SYD3_k127_9687951_5 cyclic nucleotide-binding K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 333.0
SYD3_k127_9687951_6 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 328.0
SYD3_k127_9687951_7 translation initiation factor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 341.0
SYD3_k127_9687951_8 Bacterial regulatory proteins, tetR family K13770 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001423 306.0
SYD3_k127_9697073_0 Sulfite reductase K00366,K00381,K00392 - 1.7.7.1,1.8.1.2,1.8.7.1 3.505e-270 848.0
SYD3_k127_9697073_1 domain protein K21147 - 2.7.7.80,2.8.1.11 2.694e-219 685.0
SYD3_k127_9697073_10 Catalyzes the synthesis of activated sulfate K00390,K00860 - 1.8.4.10,1.8.4.8,2.7.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 319.0
SYD3_k127_9697073_11 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000000000001229 206.0
SYD3_k127_9697073_12 Prokaryotic homologs of the JAB domain - - - 0.00000000000000000000000000000000000000000000000000000000428 227.0
SYD3_k127_9697073_13 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000001406 199.0
SYD3_k127_9697073_14 Protein of unknown function (DUF2953) - - - 0.0000000000000000000000000000000000000000000000001127 189.0
SYD3_k127_9697073_15 Sporulation protein YtfJ (Spore_YtfJ) - - - 0.0000000000000000000000000000000000000000974 156.0
SYD3_k127_9697073_16 - - - - 0.0000000000000000000000000000000001089 144.0
SYD3_k127_9697073_17 PAS sensor protein - - - 0.000000000000000005404 90.0
SYD3_k127_9697073_18 Protein of unknown function (DUF3365) - - - 0.00000000000000001251 92.0
SYD3_k127_9697073_2 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 8.575e-212 681.0
SYD3_k127_9697073_3 Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system K02045 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0006810,GO:0006811,GO:0006820,GO:0008144,GO:0008150,GO:0008272,GO:0008509,GO:0015075,GO:0015103,GO:0015116,GO:0015318,GO:0015399,GO:0015405,GO:0015419,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043225,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0072348,GO:0097159,GO:0097367,GO:0098656,GO:0098660,GO:0098661,GO:0099133,GO:1901265,GO:1901363,GO:1901682,GO:1902358 3.6.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 592.0
SYD3_k127_9697073_4 Sulfate ABC transporter, periplasmic sulfate-binding protein K02048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004664 540.0
SYD3_k127_9697073_5 Phosphoadenosine phosphosulfate reductase family K00957 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 542.0
SYD3_k127_9697073_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009117 521.0
SYD3_k127_9697073_7 Binding-protein-dependent transport system inner membrane component K02046,K15496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 465.0
SYD3_k127_9697073_8 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 439.0
SYD3_k127_9697073_9 sulfate ABC transporter K02047 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 446.0
SYD3_k127_9703176_0 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 1.232e-233 734.0
SYD3_k127_9703176_1 Nickel-dependent hydrogenase K14126 - 1.8.98.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004216 289.0
SYD3_k127_9703176_2 TIGRFAM hydrogenase maturation protease K03605 - - 0.00000000000000000000000000000000000000000000000000000000007106 208.0
SYD3_k127_9703176_3 Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE - - - 0.0000000000000000000000000000000000000000000000000000000001757 220.0
SYD3_k127_9714679_0 Carboxyl transferase domain K01966,K17489 - 2.1.3.1,2.1.3.15,6.4.1.3 2.398e-195 611.0
SYD3_k127_9714679_1 PFAM 2-nitropropane dioxygenase NPD K00459 - 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032 581.0
SYD3_k127_9714679_2 Aminotransferase class I and II K14267 - 2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 561.0
SYD3_k127_9714679_3 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005457 301.0
SYD3_k127_9714679_4 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005922 272.0
SYD3_k127_9714679_5 - - - - 0.000000000000000000000000000000000000119 149.0
SYD3_k127_9714679_6 PFAM Cold-shock protein, DNA-binding K03704 - - 0.000000000000000000000000000000000002349 140.0
SYD3_k127_9714679_7 Pfam:CPSase_L_chain - - - 0.0002559 44.0
SYD3_k127_9729410_0 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006987 475.0
SYD3_k127_9729410_1 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 347.0
SYD3_k127_9734053_0 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 8.11e-257 807.0
SYD3_k127_9734053_1 Acetyl-CoA hydrolase/transferase N-terminal domain K18288 - - 2.547e-238 749.0
SYD3_k127_9734053_10 TIGRFAM CoA-substrate-specific enzyme activase - - - 0.000000000000000000000000000000000000000003749 166.0
SYD3_k127_9734053_11 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.0000000000000000000000000000000000000002388 172.0
SYD3_k127_9734053_12 transcriptional regulator - - - 0.00000000000000000000000000000000000001708 150.0
SYD3_k127_9734053_13 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.000000000000000000000004702 106.0
SYD3_k127_9734053_2 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 3.99e-228 721.0
SYD3_k127_9734053_3 Major Facilitator K05548 - - 1.139e-214 698.0
SYD3_k127_9734053_4 Belongs to the thiolase family K07508 - 2.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 609.0
SYD3_k127_9734053_5 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004274 346.0
SYD3_k127_9734053_6 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 354.0
SYD3_k127_9734053_7 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004109 266.0
SYD3_k127_9734053_8 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.00000000000000000000000000000000000000000000000000001946 192.0
SYD3_k127_9734053_9 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000003601 180.0
SYD3_k127_9737864_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 9.171e-261 806.0
SYD3_k127_9737864_1 Type IV pilus assembly protein PilM; K02461 - - 6.965e-218 689.0
SYD3_k127_9737864_2 General secretion pathway protein F K02455,K02653 - - 5.575e-200 629.0
SYD3_k127_9737864_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007214 367.0
SYD3_k127_9737864_4 Type II secretion system (T2SS), protein K K02460 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 383.0
SYD3_k127_9737864_5 Type II secretion system (T2SS), protein J K02459 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001203 300.0
SYD3_k127_9737864_6 Type II secretion system (T2SS), protein M K02462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000951 280.0
SYD3_k127_9737864_7 general secretion pathway protein K02456,K02457,K02459,K10927,K12285 - - 0.0000000000000000000000000000000000000000000000000000000000001088 218.0
SYD3_k127_9737864_8 Prokaryotic N-terminal methylation motif K02458 - - 0.000000000000000000000000000000000000000000000000000008358 205.0
SYD3_k127_9737864_9 general secretion pathway protein G K02456 - - 0.000000000000000000000000000000000000000000003566 189.0
SYD3_k127_9751271_0 PFAM ATP-binding region, ATPase domain protein K02668,K07708,K07709 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 534.0
SYD3_k127_9751271_1 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005705 322.0
SYD3_k127_9751271_2 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000000000000000000006038 212.0
SYD3_k127_9751271_3 Two component, sigma54 specific, transcriptional regulator, Fis family K07712 - - 0.000000000000000000000000000000000000000000000000000007253 190.0
SYD3_k127_9767475_0 Peptidase family M23 K21471 - - 0.0000000006814 60.0
SYD3_k127_9802747_0 Aerotolerance regulator N-terminal - - - 0.00000000000003967 83.0
SYD3_k127_9831659_0 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 595.0
SYD3_k127_9831659_1 Uncharacterised protein family (UPF0227) K07000 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 339.0
SYD3_k127_9831659_2 AAA C-terminal domain K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004734 274.0
SYD3_k127_9831659_3 PFAM C4-dicarboxylate transporter malic acid transport protein K03304 - - 0.00000000000000000000000000000000000000000000000000000000000000003615 235.0
SYD3_k127_9831659_4 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000006989 211.0
SYD3_k127_9831659_5 - - - - 0.00000000000000000000000000000000000000000000000000374 190.0
SYD3_k127_983394_0 Protein of unknown function (DUF1207) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 379.0
SYD3_k127_983394_1 2Fe-2S iron-sulfur cluster binding domain K00302 - 1.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 297.0
SYD3_k127_983394_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003896 276.0
SYD3_k127_9845006_0 Aerotolerance regulator N-terminal - - - 0.0000000000000000000000000003129 132.0
SYD3_k127_9846646_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970,K00974 - 2.7.7.19,2.7.7.72 1.06e-201 650.0
SYD3_k127_9846646_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 4.881e-197 622.0
SYD3_k127_9846646_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003826 439.0
SYD3_k127_9846646_3 Formamidopyrimidine-DNA glycosylase N-terminal domain K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003841 435.0
SYD3_k127_9846646_4 - K06198 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004055 393.0
SYD3_k127_9846646_5 ATPase (AAA superfamily K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 377.0
SYD3_k127_9846646_6 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.0000000000000000000000000000000000000000000000000002658 186.0
SYD3_k127_9846646_7 peroxiredoxin activity K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.000000000000000000000000000000000000000000001393 166.0
SYD3_k127_9846646_8 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000002758 101.0
SYD3_k127_9846646_9 Peroxiredoxin K03564 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.11.1.15 0.000000000002844 67.0
SYD3_k127_986362_0 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.00000000000000000000000000000000000000000000000000000000000000001374 228.0
SYD3_k127_986362_1 Acyltransferase, ws dgat mgat K00635 - 2.3.1.20 0.0000000000000000000000000000387 119.0
SYD3_k127_9872218_0 Protein of unknown function (DUF1298) K00635 - 2.3.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757 364.0
SYD3_k127_9872218_1 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852,K19517 - 2.7.1.15,2.7.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 334.0
SYD3_k127_9872218_2 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 318.0
SYD3_k127_9872218_3 Saccharopine dehydrogenase NADP binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000004645 244.0
SYD3_k127_9872218_4 Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second- messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a - - - 0.000000000000000000000000000000000002426 143.0
SYD3_k127_9874337_0 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 0.0 1326.0
SYD3_k127_9874337_1 FtsX-like permease family - - - 5.815e-316 999.0
SYD3_k127_9874337_10 PFAM peptidase M24 K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004987 433.0
SYD3_k127_9874337_11 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000583 409.0
SYD3_k127_9874337_12 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007647 376.0
SYD3_k127_9874337_13 Encapsulating protein for peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 386.0
SYD3_k127_9874337_14 Smr domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008529 369.0
SYD3_k127_9874337_15 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 354.0
SYD3_k127_9874337_16 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002398 266.0
SYD3_k127_9874337_17 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007776 257.0
SYD3_k127_9874337_18 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000006519 261.0
SYD3_k127_9874337_19 Aldehyde-activating protein - - - 0.000000000000000000000000000000000000000000000000000001312 216.0
SYD3_k127_9874337_2 Acyl-CoA dehydrogenase, C-terminal domain - - - 6.733e-262 817.0
SYD3_k127_9874337_20 COG NOG27188 non supervised orthologous group - - - 0.0000000000000000000000000000000000000000000000000002943 198.0
SYD3_k127_9874337_21 Evidence 4 Homologs of previously reported genes of K09700 - - 0.000000000000000000000000000000000000000000000003043 181.0
SYD3_k127_9874337_22 COG NOG27188 non supervised orthologous group - - - 0.00000000000000000000000000000000000000000000009772 188.0
SYD3_k127_9874337_23 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000113 175.0
SYD3_k127_9874337_24 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000244 136.0
SYD3_k127_9874337_25 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.000000000000000000000000001108 130.0
SYD3_k127_9874337_3 Domain of unknown function (DUF4091) - - - 4.883e-239 756.0
SYD3_k127_9874337_4 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 6.97e-226 703.0
SYD3_k127_9874337_5 MacB-like periplasmic core domain K02004 - - 9.842e-213 667.0
SYD3_k127_9874337_6 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 581.0
SYD3_k127_9874337_7 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 536.0
SYD3_k127_9874337_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 531.0
SYD3_k127_9874337_9 Heat shock protein DnaJ domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006351 448.0
SYD3_k127_9876298_0 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000369 258.0
SYD3_k127_9876298_1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.0000000000000000003965 94.0
SYD3_k127_9878918_0 Domain of unknown function (DUF3427) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002604 434.0
SYD3_k127_9907887_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1208.0
SYD3_k127_9907887_1 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 567.0
SYD3_k127_9907887_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003228 282.0
SYD3_k127_9907887_3 photosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000801 307.0
SYD3_k127_9907887_4 Heat shock 70 kDa protein K04043 - - 0.0000000002347 72.0
SYD3_k127_9932136_0 Metallopeptidase family M24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 580.0
SYD3_k127_9932136_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009465 504.0
SYD3_k127_9935512_0 MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004125 304.0
SYD3_k127_9935512_1 Biopolymer transport protein ExbD TolR K03559 - - 0.00000000000000000000000000000000000000000101 171.0
SYD3_k127_9935512_2 energy transducer activity K03832 - - 0.000002617 53.0
SYD3_k127_9940455_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 1.127e-238 753.0
SYD3_k127_9940455_1 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001418 264.0
SYD3_k127_9940455_2 Sulfurtransferase TusA - - - 0.00000000000000000000000000000000008275 138.0
SYD3_k127_9950531_0 Pyruvate flavodoxin ferredoxin K00174 - 1.2.7.11,1.2.7.3 3.188e-320 987.0
SYD3_k127_9950531_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004394 547.0
SYD3_k127_9950531_2 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004866 539.0
SYD3_k127_9950531_3 SnoaL-like domain - - - 0.00000000000000000000000000000000000000001132 162.0
SYD3_k127_9951057_0 lysine biosynthetic process via aminoadipic acid - - - 9.397e-220 714.0
SYD3_k127_9951057_1 Peptidase family M13 K01415,K07386 - 3.4.24.71 0.000000000000000000000000000000000000000000000000005274 182.0
SYD3_k127_9961786_0 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 8.076e-204 646.0
SYD3_k127_9961786_1 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 - 1.1.1.103 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 610.0
SYD3_k127_9961786_2 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 469.0
SYD3_k127_9961786_3 indolepyruvate ferredoxin oxidoreductase activity K00179,K08941 - 1.2.7.8 0.0000000000000000003326 90.0
SYD3_k127_9970994_0 Helix-hairpin-helix class 2 (Pol1 family) motifs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 424.0
SYD3_k127_9970994_1 Cache domain K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007471 405.0
SYD3_k127_9970994_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 364.0
SYD3_k127_9970994_3 PFAM OmpA MotB domain protein K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003247 271.0
SYD3_k127_9970994_4 cheY-homologous receiver domain - - - 0.000000000000000000000000005366 116.0
SYD3_k127_9970994_5 Dinitrogenase iron-molybdenum cofactor - - - 0.00000000000000000000001864 109.0
SYD3_k127_9970994_6 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000009722 98.0
SYD3_k127_9970994_7 protein kinase activity K12132 - 2.7.11.1 0.00000001378 68.0
SYD3_k127_9978877_0 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 436.0
SYD3_k127_9978877_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003004 332.0
SYD3_k127_9984737_0 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 541.0
SYD3_k127_9984737_1 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007105 398.0
SYD3_k127_9984737_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000003881 187.0
SYD3_k127_9984737_3 - - - - 0.000000000000000000000004718 112.0
SYD3_k127_9995380_0 Flavin-binding monooxygenase-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 512.0
SYD3_k127_9995380_1 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006828 353.0
SYD3_k127_9995380_2 Peptidase family S41 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004334 269.0
SYD3_k127_9995380_4 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.000000000000000000000004044 101.0
SYD3_k127_9995380_5 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695,K03696 - - 0.000000000000000000001368 94.0