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Overview

ID MAG03804
Name SYD3_bin.5
Sample SMP0096
Taxonomy
Kingdom Bacteria
Phylum Chloroflexota
Class Limnocylindria
Order QHBO01
Family QHBO01
Genus DASURX01
Species
Assembly information
Completeness (%) 90.75
Contamination (%) 5.25
GC content (%) 71.0
N50 (bp) 17,757
Genome size (bp) 2,917,102

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2684

Gene name Description KEGG GOs EC E-value Score Sequence
SYD3_k127_10019207_0 Found in ATP-dependent protease La (LON) K01338 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 371.0
SYD3_k127_10019207_1 DnaJ molecular chaperone homology domain K03686,K05516 - - 0.0000000000000000000000000000001013 125.0
SYD3_k127_10071070_0 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000005907 213.0
SYD3_k127_10071070_1 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000001512 128.0
SYD3_k127_10071070_2 Ribosomal L27 protein K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000009766 117.0
SYD3_k127_10071070_3 Binds the 23S rRNA K02909 - - 0.0000000000000000000000009479 108.0
SYD3_k127_10071070_4 Uncharacterized protein conserved in bacteria (DUF2344) - - - 0.00000000000000103 91.0
SYD3_k127_10071070_5 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000005709 66.0
SYD3_k127_10073992_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 445.0
SYD3_k127_10073992_1 PFAM ABC transporter related K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005125 260.0
SYD3_k127_10073992_2 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000008807 225.0
SYD3_k127_10073992_3 Domain of unknown function (DUF296) K06934 - - 0.000000000000000000000007601 104.0
SYD3_k127_10073992_5 Cysteine-rich secretory protein family - - - 0.0000000000002128 83.0
SYD3_k127_10133349_0 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 396.0
SYD3_k127_10133349_1 permease - - - 0.000000000000000000000000000000000000000000000000000000001482 218.0
SYD3_k127_10133349_2 PspA/IM30 family K03969 - - 0.000000000000000000009795 94.0
SYD3_k127_10133349_3 ATPases associated with a variety of cellular activities K02013 - 3.6.3.34 0.000000000001239 79.0
SYD3_k127_10147294_0 DEAD DEAH box helicase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002828 477.0
SYD3_k127_10149374_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 328.0
SYD3_k127_10149374_1 COGs COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009187 322.0
SYD3_k127_10154870_0 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 368.0
SYD3_k127_10154870_1 Serine aminopeptidase, S33 K01259 - 3.4.11.5 0.00000000000000000007928 98.0
SYD3_k127_10167368_0 Winged helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000003114 249.0
SYD3_k127_10167368_1 kinase activity K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000007442 219.0
SYD3_k127_10167368_2 pyruvate phosphate dikinase K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000001701 189.0
SYD3_k127_10167368_3 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000001806 150.0
SYD3_k127_10167368_4 Major Facilitator Superfamily - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000009327 146.0
SYD3_k127_10167368_5 Evidence 2b Function of strongly homologous gene - - - 0.00000000000000000003656 106.0
SYD3_k127_10171246_0 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) - - - 0.00000000000000000000000000000000000000000000000000000000004057 223.0
SYD3_k127_10171246_1 glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000005322 160.0
SYD3_k127_10171246_2 - - - - 0.0000000000000000000000000000000002804 151.0
SYD3_k127_10171246_3 PHP-associated - - - 0.0000000000000000000000000000001045 133.0
SYD3_k127_10171246_4 PucR C-terminal helix-turn-helix domain - - - 0.0001757 52.0
SYD3_k127_10172584_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 1.053e-217 699.0
SYD3_k127_10172584_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 8.153e-217 685.0
SYD3_k127_10172584_10 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006297 274.0
SYD3_k127_10172584_11 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000007486 255.0
SYD3_k127_10172584_12 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000001615 175.0
SYD3_k127_10172584_13 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000001343 173.0
SYD3_k127_10172584_14 MOSC domain - - - 0.000000000000000000000000000000000000001872 153.0
SYD3_k127_10172584_15 PFAM MgtC SapB transporter K07507 - - 0.0000000000000000000000000000000002093 140.0
SYD3_k127_10172584_16 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000004259 149.0
SYD3_k127_10172584_17 Double zinc ribbon - - - 0.000000000000000000000000000004116 127.0
SYD3_k127_10172584_18 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000004845 76.0
SYD3_k127_10172584_19 CAAX protease self-immunity K07052 - - 0.000000000006051 77.0
SYD3_k127_10172584_2 Uncharacterised protein family (UPF0182) K09118 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 2.931e-204 670.0
SYD3_k127_10172584_20 Zinc finger domain - - - 0.000004479 59.0
SYD3_k127_10172584_21 PQQ-like domain - - - 0.0003343 52.0
SYD3_k127_10172584_3 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 492.0
SYD3_k127_10172584_4 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004392 440.0
SYD3_k127_10172584_5 PFAM Glucose Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 407.0
SYD3_k127_10172584_6 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003586 355.0
SYD3_k127_10172584_7 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 348.0
SYD3_k127_10172584_8 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009445 342.0
SYD3_k127_10172584_9 SAICAR synthetase K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 344.0
SYD3_k127_10255139_0 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 6.405e-234 734.0
SYD3_k127_10255139_1 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.944e-196 627.0
SYD3_k127_10255139_10 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 325.0
SYD3_k127_10255139_11 Binding-protein-dependent transport system inner membrane component K15581 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 327.0
SYD3_k127_10255139_12 PFAM monooxygenase FAD-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004075 287.0
SYD3_k127_10255139_13 Sporulation initiation inhibitor K03496 GO:0008150,GO:0022603,GO:0042173,GO:0042174,GO:0043937,GO:0043939,GO:0045595,GO:0045596,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0065007 - 0.000000000000000000000000000000000000000000000000000000000000000000002205 243.0
SYD3_k127_10255139_14 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000002806 170.0
SYD3_k127_10255139_16 ester cyclase - - - 0.0000000000000000000000001335 111.0
SYD3_k127_10255139_17 succinate dehydrogenase K00242 - - 0.0000000000000000000000001807 115.0
SYD3_k127_10255139_18 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.000000000000000000000001668 108.0
SYD3_k127_10255139_19 lactoylglutathione lyase activity K05606 - 5.1.99.1 0.00000000000000000000002565 116.0
SYD3_k127_10255139_2 Succinate dehydrogenase flavoprotein subunit K00239,K00278 GO:0000104,GO:0000166,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006113,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0022900,GO:0030030,GO:0030031,GO:0032991,GO:0033554,GO:0036094,GO:0040011,GO:0043167,GO:0043168,GO:0044085,GO:0044237,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044780,GO:0044781,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0048037,GO:0048870,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0070925,GO:0071840,GO:0071944,GO:0071949,GO:0071973,GO:0097159,GO:0097588,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363 1.3.5.1,1.3.5.4,1.4.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 610.0
SYD3_k127_10255139_20 Biotin lipoyl attachment domain-containing protein - - - 0.0000000000001774 77.0
SYD3_k127_10255139_21 Predicted integral membrane protein (DUF2269) - - - 0.0000063 57.0
SYD3_k127_10255139_22 - - - - 0.00000958 53.0
SYD3_k127_10255139_3 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs K00375 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004153 493.0
SYD3_k127_10255139_4 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 488.0
SYD3_k127_10255139_5 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 504.0
SYD3_k127_10255139_6 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 445.0
SYD3_k127_10255139_7 Biotin carboxylase C-terminal domain K01941,K01961 - 6.3.4.14,6.3.4.6,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005625 429.0
SYD3_k127_10255139_8 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 395.0
SYD3_k127_10255139_9 Alpha/beta hydrolase family K01561 - 3.8.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 368.0
SYD3_k127_10338265_0 Fructose-bisphosphate aldolase class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 496.0
SYD3_k127_10338265_1 Cytochrome b(N-terminal)/b6/petB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 336.0
SYD3_k127_10338265_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.00000000000000000000000000000000000000000000002274 178.0
SYD3_k127_10338265_3 oxidoreductase activity, acting on diphenols and related substances as donors K02636,K03886 - 1.10.9.1 0.0000000000000000000000000009402 125.0
SYD3_k127_10338265_4 Cytochrome c - - - 0.00000001416 65.0
SYD3_k127_10338265_5 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 0.00001655 49.0
SYD3_k127_10378203_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 362.0
SYD3_k127_10378203_1 toxin-antitoxin pair type II binding K19159 - - 0.00004477 55.0
SYD3_k127_10427418_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 453.0
SYD3_k127_10427418_1 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000008977 143.0
SYD3_k127_10427418_2 MgtC family - - - 0.0000000000000000000000000000005693 138.0
SYD3_k127_1047934_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1170.0
SYD3_k127_1047934_1 Carbon-nitrogen hydrolase K01502 - 3.5.5.7 0.00000000000000000000000000000003075 128.0
SYD3_k127_1047934_2 UPF0114 protein - - - 0.000000000000000002873 85.0
SYD3_k127_10508206_0 Evidence 5 No homology to any previously reported sequences K07004 - - 7.383e-195 620.0
SYD3_k127_10508206_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 418.0
SYD3_k127_10508206_10 - - - - 0.0000003617 58.0
SYD3_k127_10508206_11 - - - - 0.000002491 55.0
SYD3_k127_10508206_2 Activator of Hsp90 ATPase 1 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004978 268.0
SYD3_k127_10508206_3 High-affinity nickel-transport protein K07241 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000604 251.0
SYD3_k127_10508206_4 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002645 247.0
SYD3_k127_10508206_5 Arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000006179 248.0
SYD3_k127_10508206_6 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000005203 186.0
SYD3_k127_10508206_8 Belongs to the Fur family K03711,K09825 - - 0.00000000000000000000000003273 113.0
SYD3_k127_10508206_9 F420H(2)-dependent quinone reductase - - - 0.0000000001026 73.0
SYD3_k127_10536266_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 1.243e-200 645.0
SYD3_k127_10536266_1 COGs COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000002058 229.0
SYD3_k127_10536266_2 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000003819 187.0
SYD3_k127_10536266_3 YCII-related domain - - - 0.0000000000000000000000000000000000000000001454 181.0
SYD3_k127_10536266_4 Acyltransferase K00655 - 2.3.1.51 0.00000000004145 74.0
SYD3_k127_10536266_5 aminopeptidase N - - - 0.0006604 49.0
SYD3_k127_10733393_0 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000002672 143.0
SYD3_k127_10802072_0 R3H domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002857 352.0
SYD3_k127_10802072_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 353.0
SYD3_k127_10802072_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000001418 81.0
SYD3_k127_10802072_11 GTP binding - - - 0.00000000001633 76.0
SYD3_k127_10802072_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 294.0
SYD3_k127_10802072_3 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000001176 198.0
SYD3_k127_10802072_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000004322 202.0
SYD3_k127_10802072_5 protein conserved in bacteria - - - 0.00000000000000000000000000000000001672 139.0
SYD3_k127_10802072_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000001409 111.0
SYD3_k127_10802072_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.000000000000000000002336 97.0
SYD3_k127_10802072_8 2 iron, 2 sulfur cluster binding K00334,K18330 - 1.12.1.3,1.6.5.3 0.000000000000000009656 93.0
SYD3_k127_10802072_9 membrane - - - 0.0000000000000005052 93.0
SYD3_k127_10808773_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 349.0
SYD3_k127_10808773_1 VanZ like family - - - 0.00001059 56.0
SYD3_k127_1083602_0 Putative modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004004 508.0
SYD3_k127_1083602_1 Belongs to the dCTP deaminase family K01494 GO:0003674,GO:0003824,GO:0004170,GO:0016462,GO:0016787,GO:0016810,GO:0016814,GO:0016817,GO:0016818,GO:0019239,GO:0033973,GO:0047429 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001463 279.0
SYD3_k127_1083602_10 domain, Protein - - - 0.00000000000000000000000000000000004236 153.0
SYD3_k127_1083602_11 Peptidase MA superfamily - - - 0.0000000000000000000000000000001447 140.0
SYD3_k127_1083602_12 cytochrome c biogenesis protein K06196 - - 0.0000000000000000000000000000006166 132.0
SYD3_k127_1083602_13 of cations and cationic drugs K03297,K11741 - - 0.000000000000000000000000000000698 124.0
SYD3_k127_1083602_14 Bacterial protein of unknown function (DUF881) - - - 0.00000000000000000000000000006107 128.0
SYD3_k127_1083602_15 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000404 106.0
SYD3_k127_1083602_16 copper resistance D domain protein K14166 - - 0.000000000000000000002075 110.0
SYD3_k127_1083602_17 cyclic nucleotide binding K09766,K10914 - - 0.000000000000000002544 92.0
SYD3_k127_1083602_18 - - - - 0.000000000000000002557 87.0
SYD3_k127_1083602_19 Bacterial protein of unknown function (DUF881) - GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000005648 94.0
SYD3_k127_1083602_2 Putative modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001806 261.0
SYD3_k127_1083602_20 PFAM copper resistance protein CopC K07156 - - 0.0000000000000002022 88.0
SYD3_k127_1083602_21 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000009791 82.0
SYD3_k127_1083602_22 PFAM blue (type 1) copper domain protein - - - 0.0000000000322 70.0
SYD3_k127_1083602_23 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins - - - 0.00000000132 63.0
SYD3_k127_1083602_3 water channel activity K02440,K06188,K09874 - - 0.000000000000000000000000000000000000000000000000000000000000166 220.0
SYD3_k127_1083602_4 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000001035 231.0
SYD3_k127_1083602_5 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000001012 211.0
SYD3_k127_1083602_6 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000004113 178.0
SYD3_k127_1083602_7 Glycosyl transferase, family 2 K19003 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006629,GO:0006643,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046872,GO:0071704,GO:1901576 2.4.1.336 0.00000000000000000000000000000000000000000002317 179.0
SYD3_k127_1083602_8 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000002552 151.0
SYD3_k127_1083602_9 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000503 156.0
SYD3_k127_10843558_0 4Fe-4S dicluster domain K00184 - - 7.215e-237 775.0
SYD3_k127_10843558_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 5.525e-228 726.0
SYD3_k127_10843558_10 Protein of unknown function (DUF3341) - - - 0.0000000000009139 82.0
SYD3_k127_10843558_2 UBA THIF-type NAD FAD binding K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003981 504.0
SYD3_k127_10843558_3 Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004263 490.0
SYD3_k127_10843558_4 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 330.0
SYD3_k127_10843558_5 Pfam Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000002346 213.0
SYD3_k127_10843558_6 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000164 167.0
SYD3_k127_10843558_7 DinB family - - - 0.000000000000000000000000000000000000003168 154.0
SYD3_k127_10843558_8 JAB/MPN domain K21140 - 3.13.1.6 0.0000000000000000000000001985 110.0
SYD3_k127_10843558_9 cytochrome c - - - 0.0000000000000000001375 96.0
SYD3_k127_10861341_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005586 419.0
SYD3_k127_10861341_1 Penicillin-binding Protein dimerisation domain K03587,K08384 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008144,GO:0008150,GO:0008658,GO:0008955,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0031224,GO:0031226,GO:0031406,GO:0032153,GO:0033218,GO:0033293,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:1901363,GO:1901681 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 338.0
SYD3_k127_10861341_10 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.000000000000000000000000000000000000000001315 160.0
SYD3_k127_10861341_11 Protein of unknown function (DUF1290) - - - 0.00000000000000000000000000000006966 128.0
SYD3_k127_10861341_12 Cell division protein FtsQ K03589 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0071944 - 0.00000003729 66.0
SYD3_k127_10861341_13 Transcriptional regulatory protein, C terminal K18349 - - 0.00001865 53.0
SYD3_k127_10861341_14 - - - - 0.0008371 48.0
SYD3_k127_10861341_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006968 321.0
SYD3_k127_10861341_3 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 304.0
SYD3_k127_10861341_4 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004184 301.0
SYD3_k127_10861341_5 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005785 304.0
SYD3_k127_10861341_6 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000002212 288.0
SYD3_k127_10861341_7 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000004449 257.0
SYD3_k127_10861341_8 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000002184 232.0
SYD3_k127_10861341_9 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000002575 215.0
SYD3_k127_110536_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 4.622e-263 823.0
SYD3_k127_110536_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0034220,GO:0040007,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 1.9.3.1 2.295e-216 691.0
SYD3_k127_110536_10 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 349.0
SYD3_k127_110536_11 PFAM Proline dehydrogenase K00318 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 291.0
SYD3_k127_110536_12 Binding-protein-dependent transport system inner membrane component K02033,K15581 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007001 252.0
SYD3_k127_110536_13 Rieske [2Fe-2S] domain K03890 - - 0.00000000000000000000000000000000000000000000000000000000000000000007198 246.0
SYD3_k127_110536_14 Isochorismatase family K08281 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006766,GO:0006767,GO:0006769,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008936,GO:0009820,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0017144,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0071704,GO:0072524,GO:1901360,GO:1901564 3.5.1.19 0.00000000000000000000000000000000000000000000000000000000000003227 223.0
SYD3_k127_110536_15 N-terminal TM domain of oligopeptide transport permease C K15582 - - 0.000000000000000000000000000000000000000000000000000000000002699 227.0
SYD3_k127_110536_16 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000006974 206.0
SYD3_k127_110536_17 cytochrome C K03889 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000005748 196.0
SYD3_k127_110536_18 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0040007,GO:0042773,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044121,GO:0044237,GO:0044238,GO:0044281,GO:0044403,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0051704,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 0.0000000000000000000000000000000000000000000000002783 184.0
SYD3_k127_110536_19 Glucose-6-phosphate dehydrogenase subunit - - - 0.0000000000000000000000000000000000000344 166.0
SYD3_k127_110536_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 1.608e-199 636.0
SYD3_k127_110536_20 Probable zinc-ribbon domain - - - 0.0000000000000000000000000000000001001 136.0
SYD3_k127_110536_21 RNA polymerase II activating transcription factor binding - - - 0.0000000000000000000000000003241 132.0
SYD3_k127_110536_22 NnrU protein - - - 0.00000000000000000000001705 108.0
SYD3_k127_110536_23 Conserved Protein - - - 0.0000000006438 64.0
SYD3_k127_110536_24 transcriptional regulator - - - 0.000000001451 66.0
SYD3_k127_110536_27 Belongs to the cytochrome c oxidase bacterial subunit CtaF family - - - 0.0001408 50.0
SYD3_k127_110536_28 Rhodanese Homology Domain - - - 0.0006302 52.0
SYD3_k127_110536_3 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 1.538e-196 635.0
SYD3_k127_110536_4 Cytochrome b/b6/petB K03891 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003836 503.0
SYD3_k127_110536_5 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 497.0
SYD3_k127_110536_6 TIGRFAM cysteine desulfurase family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009048 442.0
SYD3_k127_110536_7 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 408.0
SYD3_k127_110536_8 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008777 357.0
SYD3_k127_110536_9 TIGRFAM 6-phosphogluconate dehydrogenase, decarboxylating K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 345.0
SYD3_k127_1188030_0 Peptidase family S58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001765 282.0
SYD3_k127_1188030_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000002942 226.0
SYD3_k127_1188030_3 Magnesium transport protein CorA K03284 - - 0.000000000000000000000000000000000000000000001997 181.0
SYD3_k127_1188030_4 Hemerythrin hhe cation binding - - - 0.0000000000000000000000000000002379 130.0
SYD3_k127_1188030_5 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000001399 127.0
SYD3_k127_1188030_7 Fibronectin type iii domain protein - - - 0.00002182 49.0
SYD3_k127_1192854_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 599.0
SYD3_k127_1322973_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 334.0
SYD3_k127_1327244_0 Peptidase M16 inactive domain K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 452.0
SYD3_k127_1327244_1 Phosphoribosyl-AMP cyclohydrolase K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000001346 259.0
SYD3_k127_1327244_2 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000001941 215.0
SYD3_k127_1365029_0 3-methyl-2-oxobutanoate hydroxymethyltransferase activity K00606 - 2.1.2.11 0.00000000000000000000000000000000001194 139.0
SYD3_k127_1365029_1 HD superfamily hydrolase involved in NAD metabolism K00950 - 2.7.6.3 0.00000000000000000000000000000002042 135.0
SYD3_k127_1365029_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000005832 120.0
SYD3_k127_1375475_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1257.0
SYD3_k127_1375475_1 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 2.722e-215 692.0
SYD3_k127_1375475_10 PFAM Methyltransferase type 11 - - - 0.000000000000000000000000000000000005575 145.0
SYD3_k127_1375475_11 DsrE/DsrF/DrsH-like family - - - 0.00000000000000000000000000009699 119.0
SYD3_k127_1375475_12 Sulfurtransferase TusA - - - 0.00000000000000000000001151 111.0
SYD3_k127_1375475_13 cheY-homologous receiver domain - - - 0.000000000000000000005855 98.0
SYD3_k127_1375475_14 Serine aminopeptidase, S33 K06889 GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0009605,GO:0009607,GO:0030312,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044464,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052561,GO:0052562,GO:0052564,GO:0052572,GO:0071944,GO:0075136 - 0.00000000000000000007817 101.0
SYD3_k127_1375475_15 Sulfurtransferase TusA - - - 0.0000000000000000001219 96.0
SYD3_k127_1375475_16 Transcriptional K03892 - - 0.0000000000000000001741 92.0
SYD3_k127_1375475_17 PFAM CBS domain K07182 - - 0.000000000000000174 86.0
SYD3_k127_1375475_18 FAD binding domain K21401 - 1.3.99.38 0.0000000000002817 79.0
SYD3_k127_1375475_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K03737 - 1.2.7.1 5.851e-205 654.0
SYD3_k127_1375475_3 Proline racemase K01777,K12658 - 5.1.1.4,5.1.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 476.0
SYD3_k127_1375475_4 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003365 457.0
SYD3_k127_1375475_5 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 417.0
SYD3_k127_1375475_6 Cation transport ATPase (P-type) K01537 - 3.6.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 434.0
SYD3_k127_1375475_7 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 316.0
SYD3_k127_1375475_8 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002799 275.0
SYD3_k127_1375475_9 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000001323 173.0
SYD3_k127_1414860_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000008789 228.0
SYD3_k127_1414860_1 Zinc dependent phospholipase C - - - 0.00000000000000000000000000000000000000000000000000000002051 214.0
SYD3_k127_1418072_0 Malate synthase K01638 - 2.3.3.9 1.16e-222 701.0
SYD3_k127_1418072_1 aldehyde oxidase and xanthine dehydrogenase a b hammerhead - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 622.0
SYD3_k127_1418072_10 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000000001699 177.0
SYD3_k127_1418072_11 Protein of unknown function (DUF3830) - - - 0.00000000000000000000000000000000000000003725 160.0
SYD3_k127_1418072_12 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000234 155.0
SYD3_k127_1418072_13 CoA binding domain K06929 - - 0.0000000000000000000000000000000002393 141.0
SYD3_k127_1418072_14 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 GO:0000724,GO:0000725,GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009378,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0031668,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:1901360 3.6.4.12 0.0000000000000000000000000000002689 140.0
SYD3_k127_1418072_15 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000003801 130.0
SYD3_k127_1418072_16 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000001913 125.0
SYD3_k127_1418072_17 Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily K07127 - 3.5.2.17 0.00000000000000000000000005767 111.0
SYD3_k127_1418072_18 Peptidase family M1 domain - - - 0.00000000000000000000000193 119.0
SYD3_k127_1418072_19 OHCU decarboxylase - - - 0.00000000000000000000005286 111.0
SYD3_k127_1418072_2 Amidohydrolase family K01464,K01466 - 3.5.2.2,3.5.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005412 337.0
SYD3_k127_1418072_20 Pfam Amidohydrolase K01487 - 3.5.4.3 0.00000000000008405 79.0
SYD3_k127_1418072_21 DnaJ molecular chaperone homology domain - - - 0.000000004388 64.0
SYD3_k127_1418072_3 Catalyzes the oxidation of uric acid to 5- hydroxyisourate, which is further processed to form (S)-allantoin K00365 - 1.7.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009077 310.0
SYD3_k127_1418072_4 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009032 299.0
SYD3_k127_1418072_5 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001455 267.0
SYD3_k127_1418072_6 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006497 246.0
SYD3_k127_1418072_7 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000006987 239.0
SYD3_k127_1418072_8 xanthine dehydrogenase activity K13479 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000006238 209.0
SYD3_k127_1418072_9 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000002417 182.0
SYD3_k127_1419574_0 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000007583 243.0
SYD3_k127_1419574_1 Two component, sigma54 specific, transcriptional regulator, Fis family K07712,K07714 - - 0.0000000000000000000000000000001114 128.0
SYD3_k127_1419574_2 Diguanylate cyclase - - - 0.000000000008741 69.0
SYD3_k127_1422355_0 secondary active sulfate transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000328 261.0
SYD3_k127_1431619_0 FeS assembly protein SufB K07033,K09014 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0034641,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:1901360 - 1.002e-230 722.0
SYD3_k127_1431619_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 466.0
SYD3_k127_1431619_10 of nitrite reductase and ring-hydroxylating K05710 - - 0.00000000000000003031 85.0
SYD3_k127_1431619_11 Rhodanese Homology Domain - - - 0.00002609 49.0
SYD3_k127_1431619_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 388.0
SYD3_k127_1431619_3 Fungalysin metallopeptidase (M36) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004651 321.0
SYD3_k127_1431619_4 COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004746 312.0
SYD3_k127_1431619_5 Uncharacterized protein family (UPF0051) K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001611 273.0
SYD3_k127_1431619_6 pyridine nucleotide-disulphide oxidoreductase K00529 - 1.18.1.3 0.000000000000000000000000000000000000000000000000000003195 204.0
SYD3_k127_1431619_7 NifU-like N terminal domain K04488 - - 0.00000000000000000000000000000000000004643 146.0
SYD3_k127_1431619_8 Transcriptional regulator - - - 0.000000000000000000000000001321 124.0
SYD3_k127_1431619_9 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.0000000000000000000000006594 110.0
SYD3_k127_1431890_0 Voltage gated chloride channel - - - 8.871e-226 718.0
SYD3_k127_1431890_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 443.0
SYD3_k127_1431890_10 ABC-2 family transporter protein K01992 - - 0.0000000000006243 78.0
SYD3_k127_1431890_2 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000685 396.0
SYD3_k127_1431890_3 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007145 322.0
SYD3_k127_1431890_4 Domain of unknown function (DUF4162) K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003812 295.0
SYD3_k127_1431890_5 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004047 283.0
SYD3_k127_1431890_6 HAD-superfamily hydrolase, subfamily IA, variant 1 - - - 0.00000000000000000000000000000000000000000001124 172.0
SYD3_k127_1431890_7 Winged helix DNA-binding domain - - - 0.00000000000000000000000000000007512 134.0
SYD3_k127_1431890_8 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.0000000000000000000000000001504 117.0
SYD3_k127_1431890_9 Bacterial protein of unknown function (DUF937) - - - 0.00000000000000000000007321 113.0
SYD3_k127_1432043_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009118 407.0
SYD3_k127_1432043_1 Binding-protein-dependent transport system inner membrane component K11070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006069 243.0
SYD3_k127_1432043_2 regulatory protein - - - 0.000000000000000000000000000000000000000000000000001369 200.0
SYD3_k127_1432043_3 His Kinase A (phosphoacceptor) domain - - - 0.0001527 46.0
SYD3_k127_1440382_0 xanthine dehydrogenase activity - - - 1.55e-203 660.0
SYD3_k127_1440382_1 N-acyl-D-aspartate D-glutamate deacylase K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 370.0
SYD3_k127_1440382_2 [2Fe-2S] binding domain K03518,K13483 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000006955 196.0
SYD3_k127_1440382_3 xanthine dehydrogenase activity K13479 - 1.17.1.4 0.000000000000000000000000000003734 125.0
SYD3_k127_1449900_0 Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004015 261.0
SYD3_k127_1449900_1 - - - - 0.00002779 53.0
SYD3_k127_145555_0 PFAM binding-protein-dependent transport systems inner membrane component K02025,K17242 - - 0.000000000000000000000000000000000000000000000000002045 205.0
SYD3_k127_145555_1 PFAM extracellular solute-binding protein family 1 K02027,K10188 - - 0.0000000000002254 79.0
SYD3_k127_1463124_0 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001737 286.0
SYD3_k127_1463124_1 hydrogenase 4 membrane K12140 - - 0.0000000000000004801 91.0
SYD3_k127_1464019_0 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K09181 - - 0.0 1156.0
SYD3_k127_1464019_1 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007841 508.0
SYD3_k127_1464019_2 PFAM Anion-transporting ATPase K01551 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 415.0
SYD3_k127_1464019_3 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 GO:0003674,GO:0003824,GO:0004367,GO:0006072,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0019637,GO:0044237,GO:0046167,GO:0052646,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901576 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000447 290.0
SYD3_k127_1464019_4 COG0471 Di- and tricarboxylate transporters K14445 - - 0.000000000000000000000000000000000000000000000000000000000002293 230.0
SYD3_k127_1476459_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004766 644.0
SYD3_k127_1476459_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.000000000000000000000000000000000000000000009616 181.0
SYD3_k127_1476459_2 Putative bacterial lipoprotein (DUF799) - - - 0.000000000000001473 85.0
SYD3_k127_1476459_3 NHL repeat - - - 0.000000000001525 80.0
SYD3_k127_1476459_4 Protein of unknown function (DUF2723) K14340 - - 0.000000000002901 79.0
SYD3_k127_1476459_5 ResB-like family K07399 - - 0.0000002175 63.0
SYD3_k127_1476459_6 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000003954 62.0
SYD3_k127_1476459_7 cAMP biosynthetic process K21008 - - 0.0003659 52.0
SYD3_k127_1500939_0 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005321 395.0
SYD3_k127_1506990_0 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004072 475.0
SYD3_k127_1506990_1 - - - - 0.00000000000000000000000000000000000005493 148.0
SYD3_k127_1506990_2 Protein of unknown function (DUF4242) - - - 0.000000000000000000000000000000000005972 137.0
SYD3_k127_1506990_3 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000000000000001605 137.0
SYD3_k127_1506990_4 Cysteine synthase K01697,K01738,K12339 - 2.5.1.47,4.2.1.22 0.0000000000271 66.0
SYD3_k127_1533659_0 symporter activity K03307,K11928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 320.0
SYD3_k127_1533659_1 - - - - 0.0002251 51.0
SYD3_k127_1592840_0 COG0160 4-aminobutyrate aminotransferase and related aminotransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000296 616.0
SYD3_k127_1592840_1 ATPases associated with a variety of cellular activities K16785,K16786,K16787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 574.0
SYD3_k127_1592840_10 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000129 225.0
SYD3_k127_1592840_11 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000000000005424 217.0
SYD3_k127_1592840_12 ABC-type cobalt transport system, permease component K16925 - - 0.000000000000000000000000000000000000000000000000000000002063 216.0
SYD3_k127_1592840_13 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K00982,K03564 - 1.11.1.15,2.7.7.42,2.7.7.89 0.0000000000000000000000000000000000000000000000000008277 187.0
SYD3_k127_1592840_14 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.000000000000000000000000000000000000000000000000009341 186.0
SYD3_k127_1592840_15 Cobalt transport protein K16785 - - 0.00000000000000000000000000000000000000000000000007637 196.0
SYD3_k127_1592840_16 YbaK prolyl-tRNA synthetase associated region - - - 0.000000000000000000000000000000000000000003251 160.0
SYD3_k127_1592840_17 diguanylate cyclase - - - 0.00000000000000000000000000000000000004338 166.0
SYD3_k127_1592840_18 PFAM Thiamin pyrophosphokinase, catalytic region K00949 - 2.7.6.2 0.000000000000000000000000000000000004145 147.0
SYD3_k127_1592840_19 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000002496 157.0
SYD3_k127_1592840_2 DNA ligase K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 457.0
SYD3_k127_1592840_20 FAD dependent oxidoreductase - - - 0.0000000000000000000000000001167 131.0
SYD3_k127_1592840_21 oxidoreductase activity, acting on diphenols and related substances as donors K02636,K03886 - 1.10.9.1 0.00000000000000000000000006959 117.0
SYD3_k127_1592840_22 PFAM OsmC family protein K07397 - - 0.000000000000000000000008388 107.0
SYD3_k127_1592840_23 PFAM ATP dependent DNA ligase K01971,K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000001251 93.0
SYD3_k127_1592840_24 peptidase K21471 - - 0.0000000000178 77.0
SYD3_k127_1592840_25 Serine aminopeptidase, S33 K06889 - - 0.00000000003972 74.0
SYD3_k127_1592840_26 transcriptional regulator - - - 0.0000000003911 67.0
SYD3_k127_1592840_27 - - - - 0.00000001773 60.0
SYD3_k127_1592840_28 PFAM CHAD domain containing protein K01768 - 4.6.1.1 0.0000002893 63.0
SYD3_k127_1592840_29 O-Antigen Polymerase - - - 0.0004061 54.0
SYD3_k127_1592840_3 3'-5' exonuclease activity K03547 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007654 418.0
SYD3_k127_1592840_30 Cytochrome c - - - 0.0006768 50.0
SYD3_k127_1592840_4 serine-type aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 432.0
SYD3_k127_1592840_5 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 405.0
SYD3_k127_1592840_6 Cytochrome b(N-terminal)/b6/petB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003674 338.0
SYD3_k127_1592840_7 Sodium/calcium exchanger protein K07300 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001294 290.0
SYD3_k127_1592840_8 Helix-turn-helix type 11 domain protein K13572 - - 0.000000000000000000000000000000000000000000000000000000000000002011 244.0
SYD3_k127_1592840_9 NTF2-like N-terminal transpeptidase domain K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000297 245.0
SYD3_k127_160217_0 Histidine kinase K02668 - 2.7.13.3 6.827e-229 717.0
SYD3_k127_160217_1 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 428.0
SYD3_k127_1617943_0 Small GTP-binding protein K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007542 251.0
SYD3_k127_1617943_1 Domain of unknown function (DUF4388) - - - 0.000000000000000000000000000000000000000002538 169.0
SYD3_k127_1617943_2 Tetratricopeptide repeat - - - 0.00000000000002991 76.0
SYD3_k127_1617943_3 Roadblock/LC7 domain - - - 0.000000006356 67.0
SYD3_k127_1617943_4 Roadblock/LC7 domain K07131 - - 0.00002606 52.0
SYD3_k127_1617943_5 Tetratricopeptide repeat - - - 0.00006072 55.0
SYD3_k127_1622165_0 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001851 252.0
SYD3_k127_1622165_1 O-acyltransferase activity - - - 0.00000000000000004348 85.0
SYD3_k127_1622165_2 PFAM CBS domain containing protein K04767 - - 0.00000002373 60.0
SYD3_k127_1660321_0 Acts as a magnesium transporter K04767,K06213,K15986 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 360.0
SYD3_k127_1660321_1 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000001003 68.0
SYD3_k127_1674008_0 5'-nucleotidase, C-terminal domain K01119 - 3.1.3.6,3.1.4.16 0.0 1065.0
SYD3_k127_1674008_1 TipAS antibiotic-recognition domain K21744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003476 288.0
SYD3_k127_1674008_2 amine dehydrogenase activity - - - 0.0000000000000000000003461 109.0
SYD3_k127_1674008_3 Cold shock protein domain - - - 0.00000000000269 69.0
SYD3_k127_1680946_0 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 7.582e-246 807.0
SYD3_k127_1680946_1 Putative glutamine amidotransferase K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005451 618.0
SYD3_k127_1680946_10 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 291.0
SYD3_k127_1680946_11 Binding-protein-dependent transport system inner membrane component K11070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001401 275.0
SYD3_k127_1680946_12 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000002603 237.0
SYD3_k127_1680946_13 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.0000000000000000000000000000000000000000000000000006851 202.0
SYD3_k127_1680946_14 PFAM AMP-dependent synthetase and ligase - - - 0.00000000000000000000000000000000000000000000000001772 205.0
SYD3_k127_1680946_15 regulatory protein - - - 0.00000000000000000000000000000000000000000000006185 189.0
SYD3_k127_1680946_16 Histidine kinase - - - 0.000000000000000000000000000000000000002152 167.0
SYD3_k127_1680946_17 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000003313 163.0
SYD3_k127_1680946_18 ABC-2 family transporter protein - - - 0.00000000000000000000000000000002823 141.0
SYD3_k127_1680946_19 Alpha beta hydrolase - - - 0.000000000000000000000000000004259 130.0
SYD3_k127_1680946_2 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 451.0
SYD3_k127_1680946_3 PFAM regulatory protein LuxR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006215 454.0
SYD3_k127_1680946_4 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003841 435.0
SYD3_k127_1680946_5 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 403.0
SYD3_k127_1680946_6 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004737 332.0
SYD3_k127_1680946_7 ABC-type spermidine putrescine transport system, permease component I K11071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 327.0
SYD3_k127_1680946_8 von Willebrand factor, type A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006717 330.0
SYD3_k127_1680946_9 PFAM extracellular solute-binding protein family 1 K11069 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007263 297.0
SYD3_k127_1690463_0 Participates in initiation and elongation during chromosome replication K02314 GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 484.0
SYD3_k127_1690463_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411 443.0
SYD3_k127_1690463_10 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000804 200.0
SYD3_k127_1690463_11 PFAM binding-protein-dependent transport systems inner membrane component K02050 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000001883 182.0
SYD3_k127_1690463_12 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032991,GO:0032993,GO:0033554,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 3.4.21.88 0.000000000000000000000000000000000000000000000007851 180.0
SYD3_k127_1690463_13 PFAM NMT1 THI5 like domain protein K02051 - - 0.0000000000000000000000000000000000000000000002998 179.0
SYD3_k127_1690463_14 Belongs to the UPF0145 family - - - 0.00000000000000000000000000000000000000006243 156.0
SYD3_k127_1690463_15 Probable zinc-ribbon domain - - - 0.00000000000000000000000000000000001623 139.0
SYD3_k127_1690463_16 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000002956 139.0
SYD3_k127_1690463_17 PFAM Formiminotransferase-cyclodeaminase - - - 0.00000000000000000000000000001335 128.0
SYD3_k127_1690463_18 family transcriptional regulator K13652 - - 0.000000000000000000000000008169 117.0
SYD3_k127_1690463_2 AAA domain K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 419.0
SYD3_k127_1690463_20 Protein of unknown function (DUF1232) - - - 0.00000000000113 76.0
SYD3_k127_1690463_21 Domain of unknown function (DUF378) K09779 - - 0.00000000001467 71.0
SYD3_k127_1690463_3 IMP dehydrogenase / GMP reductase domain K00088 - 1.1.1.205 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 398.0
SYD3_k127_1690463_4 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 369.0
SYD3_k127_1690463_5 Winged helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005279 328.0
SYD3_k127_1690463_6 COGs COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000009183 247.0
SYD3_k127_1690463_7 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000002134 228.0
SYD3_k127_1690463_8 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000001049 226.0
SYD3_k127_1690463_9 transcriptional regulator K22491 - - 0.00000000000000000000000000000000000000000000000000000009362 207.0
SYD3_k127_1700388_0 PFAM CobB CobQ domain protein glutamine amidotransferase K07009 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007146 261.0
SYD3_k127_1700388_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01317,K01925,K01928,K01932 - 3.4.21.10,6.3.2.13,6.3.2.9 0.0000000000000000000000000000047 123.0
SYD3_k127_1702534_0 Glycosyl hydrolases family 15 - - - 3.219e-313 983.0
SYD3_k127_1702534_1 citrate synthase K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009783 576.0
SYD3_k127_1702534_10 endonuclease III K03575 - - 0.0000000000000000000000000000000000000000000000000000001078 207.0
SYD3_k127_1702534_11 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000007469 204.0
SYD3_k127_1702534_12 Protein of unknown function (DUF554) K07150 - - 0.000000000000000000000000000000000000000000000000000002652 199.0
SYD3_k127_1702534_13 low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000001494 189.0
SYD3_k127_1702534_14 ACT domain K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000002695 183.0
SYD3_k127_1702534_15 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000004289 170.0
SYD3_k127_1702534_16 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K01259 - 3.4.11.5 0.0000000000000000000000000000000006729 142.0
SYD3_k127_1702534_17 PFAM Haloacid dehalogenase domain protein hydrolase K07025 - - 0.0000000000000000000000000002462 126.0
SYD3_k127_1702534_18 - - - - 0.000000000000000000000006341 110.0
SYD3_k127_1702534_19 NUDIX domain - - - 0.0000000000000005264 84.0
SYD3_k127_1702534_2 ABC transporter K06022,K06158,K10834 - 3.6.3.29,3.6.3.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 560.0
SYD3_k127_1702534_20 Polymer-forming cytoskeletal - - - 0.0000000000001236 80.0
SYD3_k127_1702534_21 PFAM AhpC TSA family K03564 - 1.11.1.15 0.0000003323 62.0
SYD3_k127_1702534_22 EamA-like transporter family K11939 - - 0.0006229 51.0
SYD3_k127_1702534_3 glutamate-tRNA ligase activity K01885,K09698 - 6.1.1.17,6.1.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 434.0
SYD3_k127_1702534_4 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003361 430.0
SYD3_k127_1702534_5 PFAM Cys Met metabolism K01739 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009086,GO:0009092,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0017144,GO:0019279,GO:0019343,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071265,GO:0071266,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 420.0
SYD3_k127_1702534_6 L-malate dehydrogenase activity K00024 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006107,GO:0006108,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019362,GO:0019637,GO:0019674,GO:0019752,GO:0030060,GO:0030312,GO:0034641,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046483,GO:0046496,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072350,GO:0072524,GO:1901360,GO:1901564 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 412.0
SYD3_k127_1702534_7 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000001138 286.0
SYD3_k127_1702534_8 L-asparaginase II - - - 0.000000000000000000000000000000000000000000000000000000000000000000003894 250.0
SYD3_k127_1702534_9 Uncharacterized protein conserved in bacteria (DUF2332) - - - 0.0000000000000000000000000000000000000000000000000000000000006024 224.0
SYD3_k127_177685_0 RimK-like ATP-grasp domain K03802 - 6.3.2.29,6.3.2.30 0.0 1172.0
SYD3_k127_177685_1 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1120.0
SYD3_k127_177685_10 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 347.0
SYD3_k127_177685_11 Peptidase family S51 K13282 - 3.4.15.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 330.0
SYD3_k127_177685_12 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005812 321.0
SYD3_k127_177685_13 transmembrane transporter activity K08225 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 301.0
SYD3_k127_177685_14 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001104 295.0
SYD3_k127_177685_15 GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000396 285.0
SYD3_k127_177685_16 ABC-2 type transporter K09694 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001855 256.0
SYD3_k127_177685_17 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000239 252.0
SYD3_k127_177685_18 DNA alkylation repair enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003663 250.0
SYD3_k127_177685_19 Transport permease protein K09694 - - 0.00000000000000000000000000000000000000000000000000000000000002177 223.0
SYD3_k127_177685_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 465.0
SYD3_k127_177685_20 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.0000000000000000000000000000000000000000000000000001012 208.0
SYD3_k127_177685_21 Belongs to the UPF0173 family - - - 0.0000000000000000000000000000000000000000000000000003715 193.0
SYD3_k127_177685_22 - - - - 0.0000000000000000000000000000000000000001305 161.0
SYD3_k127_177685_23 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000004912 149.0
SYD3_k127_177685_24 beta-lactamase domain protein - - - 0.000000000000000000000000000000000007159 155.0
SYD3_k127_177685_25 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000000000000000000000003363 132.0
SYD3_k127_177685_26 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000103 114.0
SYD3_k127_177685_27 Histidine kinase - - - 0.0000000000000000000000003747 122.0
SYD3_k127_177685_28 Transcriptional regulator PadR-like family - - - 0.000000000000000000000004926 104.0
SYD3_k127_177685_29 Thioesterase superfamily K07107 - - 0.0000000000000000000001473 102.0
SYD3_k127_177685_3 AAA domain, putative AbiEii toxin, Type IV TA system K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 447.0
SYD3_k127_177685_30 PFAM Aminotransferase class I and II K04720 - 4.1.1.81 0.0000000003578 69.0
SYD3_k127_177685_31 Putative adhesin - - - 0.000000001591 69.0
SYD3_k127_177685_32 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.000000001759 66.0
SYD3_k127_177685_33 CSL zinc finger K17867 - - 0.000004968 59.0
SYD3_k127_177685_34 - - - - 0.0008194 49.0
SYD3_k127_177685_4 PFAM Transketolase central region K00167 - 1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009178 414.0
SYD3_k127_177685_5 Tetratrico peptide repeat K03802 - 6.3.2.29,6.3.2.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 421.0
SYD3_k127_177685_6 Flavin-binding monooxygenase-like K07222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006366 412.0
SYD3_k127_177685_7 e3 binding domain K00627,K09699 - 2.3.1.12,2.3.1.168 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 375.0
SYD3_k127_177685_8 peptidase K01295 - 3.4.17.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 367.0
SYD3_k127_177685_9 Dehydrogenase E1 component K00166 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 362.0
SYD3_k127_178278_0 amino acid K20265 GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0006873,GO:0006885,GO:0008150,GO:0008509,GO:0008514,GO:0009987,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0019725,GO:0022804,GO:0022857,GO:0030003,GO:0030004,GO:0030641,GO:0031224,GO:0031226,GO:0034220,GO:0042592,GO:0044425,GO:0044459,GO:0044464,GO:0045852,GO:0046942,GO:0046943,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0051453,GO:0051454,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:0098771,GO:1902475,GO:1903825,GO:1905039 - 0.0000000000000000000000000000000000000000225 156.0
SYD3_k127_178278_1 PFAM X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.000000000000000000000000000001563 134.0
SYD3_k127_1795410_0 Heat shock protein HtpX K03799 - - 0.000000000000000000000000000000000000000000000001428 187.0
SYD3_k127_1804903_0 PFAM Phenylalanine and histidine ammonia-lyase K01745 - 4.3.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 501.0
SYD3_k127_1804903_1 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005445 457.0
SYD3_k127_1804903_2 zinc transporter K07238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000567 244.0
SYD3_k127_1804903_3 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000001289 219.0
SYD3_k127_1804903_4 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000001654 158.0
SYD3_k127_1804903_5 PIN domain - - - 0.000000000000000000000000000008694 122.0
SYD3_k127_1804903_6 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000002591 78.0
SYD3_k127_1804903_7 Phosphoesterase, PA-phosphatase related K19302 - 3.6.1.27 0.000000000006684 77.0
SYD3_k127_1804903_8 phosphinothricin N-acetyltransferase activity - - - 0.00000002748 65.0
SYD3_k127_1804903_9 SpoVT / AbrB like domain - - - 0.0001373 48.0
SYD3_k127_1824281_0 PFAM Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004135 439.0
SYD3_k127_1830541_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 387.0
SYD3_k127_1830541_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005971 317.0
SYD3_k127_1830541_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009587 277.0
SYD3_k127_1830541_3 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000004615 160.0
SYD3_k127_1830541_4 HD superfamily hydrolase involved in NAD metabolism K00950 - 2.7.6.3 0.000000000000000000000000000000000000009105 149.0
SYD3_k127_1830541_5 HD superfamily hydrolase involved in NAD metabolism K00950 - 2.7.6.3 0.0000000000000000000000000000000000154 151.0
SYD3_k127_1830541_6 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K02660,K11525 - - 0.0000000000000000000000000004685 132.0
SYD3_k127_1830541_7 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000004861 68.0
SYD3_k127_1878181_0 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009721 443.0
SYD3_k127_1878181_1 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000105 176.0
SYD3_k127_1893967_0 Putative cell wall binding repeat 2 - - - 3.888e-213 683.0
SYD3_k127_1893967_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006457,GO:0006458,GO:0006725,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009266,GO:0009295,GO:0009408,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016465,GO:0030312,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0040007,GO:0042026,GO:0042262,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043388,GO:0043590,GO:0044093,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0050896,GO:0051082,GO:0051098,GO:0051099,GO:0051101,GO:0051716,GO:0061077,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090143,GO:0090304,GO:0097159,GO:0101031,GO:1901360,GO:1901363,GO:1990220,GO:2000677,GO:2000679 - 3.777e-209 663.0
SYD3_k127_1893967_10 Oxidoreductase NAD-binding domain K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000001745 160.0
SYD3_k127_1893967_11 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000003927 141.0
SYD3_k127_1893967_12 YCII-related domain - - - 0.0000000000000004267 82.0
SYD3_k127_1893967_14 Serine aminopeptidase, S33 - - - 0.00001498 54.0
SYD3_k127_1893967_2 PFAM UvrD REP helicase K03657 - 3.6.4.12 3.748e-205 665.0
SYD3_k127_1893967_3 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 3.749e-198 640.0
SYD3_k127_1893967_4 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 614.0
SYD3_k127_1893967_5 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 441.0
SYD3_k127_1893967_6 oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004139 314.0
SYD3_k127_1893967_7 Phosphoenolpyruvate phosphomutase - - - 0.0000000000000000000000000000000000000000000000000000000000000001311 245.0
SYD3_k127_1893967_8 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000002285 235.0
SYD3_k127_1893967_9 TatD related DNase K03424 GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000001813 210.0
SYD3_k127_1930275_0 PFAM UBA THIF-type NAD FAD binding protein K21029,K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 404.0
SYD3_k127_1930275_1 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01697,K01738,K12339 - 2.5.1.47,4.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009802 392.0
SYD3_k127_1930275_2 Mov34 MPN PAD-1 family K21140 - 3.13.1.6 0.000000000000000000000000000000000149 137.0
SYD3_k127_1930275_3 Polysaccharide deacetylase - - - 0.00000000000000000000000008827 111.0
SYD3_k127_1930275_4 Mo-molybdopterin cofactor metabolic process K03636,K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000003724 116.0
SYD3_k127_1933875_0 PFAM Formiminotransferase domain, N-terminal subdomain K00603,K01746 - 2.1.2.5,4.3.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 328.0
SYD3_k127_1933875_1 PFAM FMN-dependent dehydrogenase K00101,K16422 - 1.1.2.3,1.1.3.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 314.0
SYD3_k127_1933875_2 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.00000000000000000000000000000000000001141 145.0
SYD3_k127_1933875_3 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.000000000000000000000000000000001215 135.0
SYD3_k127_1933875_4 glutamine-fructose-6-phosphate transaminase (isomerizing) activity - - - 0.0000000000006576 81.0
SYD3_k127_1948086_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 499.0
SYD3_k127_1948086_1 Multicopper oxidase K00368 - 1.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008804 482.0
SYD3_k127_1948086_2 histidine kinase dimerisation and phosphoacceptor region K03406,K07673,K07675 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008596 288.0
SYD3_k127_1948086_3 Two component transcriptional regulator, LuxR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002071 246.0
SYD3_k127_1948086_4 - - - - 0.00000000000000000000000000000000000000000000000004536 187.0
SYD3_k127_1948086_5 Transcriptional regulator - - - 0.00000000000000000004338 96.0
SYD3_k127_1948086_6 Multicopper oxidase K00368 - 1.7.2.1 0.00000000000000005619 94.0
SYD3_k127_1951366_0 Two component, sigma54 specific, transcriptional regulator, Fis family K07712,K07714 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0043565,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 398.0
SYD3_k127_1963373_0 Adenylate K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 622.0
SYD3_k127_1983268_0 Methyltransferase type 11 K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009073 336.0
SYD3_k127_1983268_1 Coenzyme A transferase K01039 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000002127 253.0
SYD3_k127_1983268_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000007815 226.0
SYD3_k127_1983268_3 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000002865 89.0
SYD3_k127_1983268_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000006631 68.0
SYD3_k127_1983268_5 EamA-like transporter family - - - 0.000227 53.0
SYD3_k127_1988572_0 Anticodon-binding domain of tRNA K01870 - 6.1.1.5 0.0 1196.0
SYD3_k127_1988572_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 5.148e-239 766.0
SYD3_k127_1988572_10 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 378.0
SYD3_k127_1988572_11 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 362.0
SYD3_k127_1988572_12 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 359.0
SYD3_k127_1988572_13 Required for morphogenesis under gluconeogenic growth conditions - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 358.0
SYD3_k127_1988572_14 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 331.0
SYD3_k127_1988572_15 Binding-protein-dependent transport systems inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 340.0
SYD3_k127_1988572_16 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 321.0
SYD3_k127_1988572_17 Single-stranded-DNA-specific exonuclease recj K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 336.0
SYD3_k127_1988572_18 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 319.0
SYD3_k127_1988572_19 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 317.0
SYD3_k127_1988572_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 2.1e-200 643.0
SYD3_k127_1988572_20 Putative glycosyl hydrolase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 319.0
SYD3_k127_1988572_21 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002308 312.0
SYD3_k127_1988572_22 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030312,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004819 310.0
SYD3_k127_1988572_23 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 323.0
SYD3_k127_1988572_24 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 297.0
SYD3_k127_1988572_25 Mur ligase family, catalytic domain K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008284 306.0
SYD3_k127_1988572_26 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 290.0
SYD3_k127_1988572_27 PFAM Sodium calcium exchanger membrane region K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002974 284.0
SYD3_k127_1988572_28 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001251 269.0
SYD3_k127_1988572_29 iron ion homeostasis K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002556 265.0
SYD3_k127_1988572_3 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 589.0
SYD3_k127_1988572_30 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000002143 269.0
SYD3_k127_1988572_31 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000419 252.0
SYD3_k127_1988572_32 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003118 261.0
SYD3_k127_1988572_33 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000001243 258.0
SYD3_k127_1988572_34 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000001758 240.0
SYD3_k127_1988572_35 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000001574 231.0
SYD3_k127_1988572_36 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000004205 229.0
SYD3_k127_1988572_37 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000001239 234.0
SYD3_k127_1988572_38 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000004802 219.0
SYD3_k127_1988572_39 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000006557 217.0
SYD3_k127_1988572_4 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 519.0
SYD3_k127_1988572_40 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000005371 211.0
SYD3_k127_1988572_41 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000796 212.0
SYD3_k127_1988572_42 Belongs to the UPF0234 family K09767 - - 0.0000000000000000000000000000000000000000000000000000003129 199.0
SYD3_k127_1988572_43 Putative neutral zinc metallopeptidase K06973 - - 0.00000000000000000000000000000000000000000000000000001072 198.0
SYD3_k127_1988572_44 zinc metalloprotease K04771,K11749,K16922 GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016021,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0040007,GO:0043170,GO:0043856,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0045152,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:0140110,GO:1901564,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 3.4.21.107 0.0000000000000000000000000000000000000000000000000000119 203.0
SYD3_k127_1988572_45 TIGRFAM riboflavin biosynthesis protein RibF K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000007311 208.0
SYD3_k127_1988572_46 lytic transglycosylase - - - 0.0000000000000000000000000000000000000000000000000006611 199.0
SYD3_k127_1988572_47 DHH family K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000001535 195.0
SYD3_k127_1988572_48 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 - 4.1.1.23 0.000000000000000000000000000000000000000000000000003695 202.0
SYD3_k127_1988572_49 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000287 190.0
SYD3_k127_1988572_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004127 499.0
SYD3_k127_1988572_50 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000002306 180.0
SYD3_k127_1988572_51 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.000000000000000000000000000000000000000000000003419 177.0
SYD3_k127_1988572_52 Inosine-uridine preferring nucleoside hydrolase K01239 - 3.2.2.1 0.00000000000000000000000000000000000000000000009957 188.0
SYD3_k127_1988572_53 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000002534 188.0
SYD3_k127_1988572_54 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.000000000000000000000000000000000000000000008112 171.0
SYD3_k127_1988572_55 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000005257 169.0
SYD3_k127_1988572_56 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008463,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.000000000000000000000000000000000000000004819 165.0
SYD3_k127_1988572_57 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000005818 169.0
SYD3_k127_1988572_58 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000001716 155.0
SYD3_k127_1988572_59 PFAM response regulator receiver K02282 - - 0.00000000000000000000000000000000000001007 160.0
SYD3_k127_1988572_6 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 GO:0003674,GO:0003824,GO:0004619,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0030145,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043167,GO:0043169,GO:0043436,GO:0043937,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046537,GO:0046700,GO:0046872,GO:0046914,GO:0046939,GO:0050789,GO:0050793,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 504.0
SYD3_k127_1988572_60 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0022804,GO:0022857,GO:0022884,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0040007,GO:0042886,GO:0042887,GO:0043953,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.00000000000000000000000000000000000009296 151.0
SYD3_k127_1988572_61 Methyltransferase K08316 - 2.1.1.171 0.000000000000000000000000000000004508 140.0
SYD3_k127_1988572_62 May be required for sporulation K09762 - - 0.00000000000000000000000000000001003 138.0
SYD3_k127_1988572_63 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000000000000000001998 134.0
SYD3_k127_1988572_64 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0015935,GO:0016020,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.000000000000000000000000000001296 128.0
SYD3_k127_1988572_65 Belongs to the CinA family K03742,K03743 - 3.5.1.42 0.000000000000000000000000000001539 132.0
SYD3_k127_1988572_66 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000003172 130.0
SYD3_k127_1988572_67 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000007773 121.0
SYD3_k127_1988572_68 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000208 117.0
SYD3_k127_1988572_69 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000008176 116.0
SYD3_k127_1988572_7 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003241 497.0
SYD3_k127_1988572_70 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000001042 111.0
SYD3_k127_1988572_71 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.4.23.36 0.00000000000000000000000002762 114.0
SYD3_k127_1988572_72 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.00000000000000000000000009633 109.0
SYD3_k127_1988572_73 Ribosomal protein S16 K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000002319 109.0
SYD3_k127_1988572_74 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000006227 111.0
SYD3_k127_1988572_75 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000008652 106.0
SYD3_k127_1988572_76 PFAM Transglycosylase-associated protein - - - 0.00000000000000000000009256 100.0
SYD3_k127_1988572_77 Glycosyltransferase family 87 - - - 0.0000000000000000000001754 114.0
SYD3_k127_1988572_78 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) - - - 0.0000000000000000001386 97.0
SYD3_k127_1988572_79 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000006745 89.0
SYD3_k127_1988572_8 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006735 468.0
SYD3_k127_1988572_80 SMART helix-turn-helix domain protein - - - 0.0000000000000000143 96.0
SYD3_k127_1988572_81 Protein of unknown function (DUF448) K07742 - - 0.000000000000005088 79.0
SYD3_k127_1988572_82 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000002307 75.0
SYD3_k127_1988572_83 Belongs to the UPF0109 family K06960 - - 0.00000000000003623 80.0
SYD3_k127_1988572_84 Belongs to the UPF0102 family K07460 - - 0.0000000000001464 77.0
SYD3_k127_1988572_85 Hydrogenase assembly chaperone hypC hupF K04653 - - 0.0000000000005699 74.0
SYD3_k127_1988572_87 PFAM Cupin 2 conserved barrel domain protein - - - 0.00000000001876 72.0
SYD3_k127_1988572_88 hyperosmotic response K04065 - - 0.000000001615 66.0
SYD3_k127_1988572_89 Preprotein translocase SecG subunit K03075 - - 0.000000008141 69.0
SYD3_k127_1988572_9 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003972 433.0
SYD3_k127_1988572_90 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000001353 67.0
SYD3_k127_1988572_91 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.0000001968 55.0
SYD3_k127_1988572_92 - - - - 0.000000835 50.0
SYD3_k127_1988572_93 sequence-specific DNA binding K15539 - - 0.00000294 59.0
SYD3_k127_2003082_0 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01214 - 3.2.1.68 5.43e-313 972.0
SYD3_k127_2003082_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016020,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0040007,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0055114,GO:0071704,GO:0071944,GO:1901576 2.4.1.18 2.12e-282 889.0
SYD3_k127_2003082_10 Subtilase family K14743 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001608 279.0
SYD3_k127_2003082_11 Putative cell wall binding repeat 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002637 263.0
SYD3_k127_2003082_12 N-acetylmuramoyl-L-alanine amidase - - - 0.000000000000000000000000000000000000000000000000000000000000000006214 252.0
SYD3_k127_2003082_13 Phosphotransferase enzyme family K00700,K05343,K16146 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016310,GO:0034637,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046835,GO:0071704,GO:0071944,GO:1901576 2.4.1.18,2.7.1.175,3.2.1.1,5.4.99.16 0.000000000000000000000000000000000000000000000000000000000000002668 242.0
SYD3_k127_2003082_14 PFAM ABC transporter related K02003 - - 0.000000000000000000000000000000000000000000000000000000000524 212.0
SYD3_k127_2003082_15 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K01776,K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66,5.1.1.3 0.0000000000000000000000000000000003327 140.0
SYD3_k127_2003082_16 Glyco_18 - - - 0.000000000000000000000000000003191 139.0
SYD3_k127_2003082_17 BetI-type transcriptional repressor, C-terminal - - - 0.00000000000000000000000008017 115.0
SYD3_k127_2003082_18 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000007355 109.0
SYD3_k127_2003082_19 Polysaccharide deacetylase - - - 0.00000000464 70.0
SYD3_k127_2003082_2 Maltogenic Amylase, C-terminal domain K05343 - 3.2.1.1,5.4.99.16 7.416e-271 845.0
SYD3_k127_2003082_20 peptidase inhibitor activity - - - 0.0002482 53.0
SYD3_k127_2003082_3 Voltage gated chloride channel K03281 - - 1.158e-222 710.0
SYD3_k127_2003082_4 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 3.189e-200 644.0
SYD3_k127_2003082_5 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 588.0
SYD3_k127_2003082_6 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 522.0
SYD3_k127_2003082_7 MreB/Mbl protein K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005263 457.0
SYD3_k127_2003082_8 Putative cell wall binding repeat 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005932 306.0
SYD3_k127_2003082_9 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989,K02428 - 2.7.7.56,3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003082 277.0
SYD3_k127_2003110_0 Belongs to the peptidase M24B family K01271,K01274 - 3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000007729 239.0
SYD3_k127_2003110_1 Subtilase family K17734 - - 0.0000000002431 74.0
SYD3_k127_2003110_2 N-acetylmuramoyl-L-alanine amidase - - - 0.000000005102 70.0
SYD3_k127_2003163_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 8.933e-234 754.0
SYD3_k127_2003163_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008592 574.0
SYD3_k127_2003163_10 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000007623 213.0
SYD3_k127_2003163_11 Mechanosensitive ion channel K22044 - - 0.00000000000000000000000000000000000000000000000000001219 199.0
SYD3_k127_2003163_12 PFAM Forkhead-associated protein - - - 0.000000000000000000000000000000000000005231 156.0
SYD3_k127_2003163_13 PFAM response regulator receiver K02282 - - 0.000000000000000000000000000000000000005833 166.0
SYD3_k127_2003163_14 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.000000000000000000000000000003053 125.0
SYD3_k127_2003163_15 phosphoglycerate mutase K02226 - 3.1.3.73 0.00000000000000000000000000002599 136.0
SYD3_k127_2003163_16 Phage integrase family - - - 0.00000000000000000000000005449 112.0
SYD3_k127_2003163_17 Regulatory protein, FmdB family - - - 0.00000000000000000004354 94.0
SYD3_k127_2003163_18 PFAM Forkhead-associated protein - - - 0.0000000000000000329 92.0
SYD3_k127_2003163_2 ATPase associated with various cellular K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 438.0
SYD3_k127_2003163_3 AAA ATPase, central domain protein K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 433.0
SYD3_k127_2003163_4 Cell cycle protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005203 379.0
SYD3_k127_2003163_5 Aminotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008911 315.0
SYD3_k127_2003163_6 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000159 278.0
SYD3_k127_2003163_7 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002415 293.0
SYD3_k127_2003163_8 Cell division protein FtsI penicillin-binding protein K05364 - - 0.000000000000000000000000000000000000000000000000000000000000000009051 246.0
SYD3_k127_2003163_9 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000000000000000000000000002425 223.0
SYD3_k127_2055306_0 Belongs to the xylose isomerase family K01805 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009045,GO:0009056,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019323,GO:0042732,GO:0042843,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046365,GO:0071704,GO:1901575 5.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007983 603.0
SYD3_k127_2055306_1 Belongs to the binding-protein-dependent transport system permease family K10544 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0015144,GO:0015145,GO:0015749,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0034219,GO:0044425,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007477 425.0
SYD3_k127_2055306_2 ABC-type sugar transport system, ATPase component K10545 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 351.0
SYD3_k127_2055306_3 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006184 331.0
SYD3_k127_2055306_4 Transcriptional regulator sugar kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006233 310.0
SYD3_k127_2055306_5 COG4213 ABC-type xylose transport system, periplasmic component K10543 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005975,GO:0005996,GO:0006810,GO:0008150,GO:0008152,GO:0008643,GO:0015749,GO:0015750,GO:0015753,GO:0019321,GO:0030246,GO:0030288,GO:0030313,GO:0031975,GO:0034219,GO:0036094,GO:0042597,GO:0042732,GO:0044238,GO:0044281,GO:0044464,GO:0048029,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071704 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000331 295.0
SYD3_k127_2055306_6 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005303 261.0
SYD3_k127_2055306_7 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000009072 224.0
SYD3_k127_2055306_8 FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 0.00000000000000000000000000000000000000000000486 171.0
SYD3_k127_2071379_0 magnesium chelatase K03405 - 6.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 299.0
SYD3_k127_2071379_1 Predicted membrane protein (DUF2339) - - - 0.0000001599 65.0
SYD3_k127_212251_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 302.0
SYD3_k127_2185206_0 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 385.0
SYD3_k127_2185206_1 PFAM permease K07089 - - 0.00000000000000000000000000000000000000000000000000001494 197.0
SYD3_k127_2185206_2 PFAM sigma-70 region 2 domain protein K03088 - - 0.00000000000000000000002397 107.0
SYD3_k127_2185206_3 PA14 domain - - - 0.000000002977 68.0
SYD3_k127_2185206_4 arsR family transcriptional regulator K03892 - - 0.0000005342 57.0
SYD3_k127_220690_0 PFAM oxidoreductase molybdopterin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005667 451.0
SYD3_k127_220690_1 lipid kinase, YegS Rv2252 BmrU family - - - 0.00000000000000000000000000000000000000000002116 179.0
SYD3_k127_220690_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000001751 141.0
SYD3_k127_220690_3 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.00000000000000000002244 97.0
SYD3_k127_220690_4 peptidase activity, acting on L-amino acid peptides K13735,K20276,K21449 - - 0.00000000008455 73.0
SYD3_k127_2215010_0 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000003139 147.0
SYD3_k127_2215010_1 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000003428 130.0
SYD3_k127_2215010_2 Alpha beta hydrolase - - - 0.000000006795 68.0
SYD3_k127_224629_0 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000004991 214.0
SYD3_k127_224629_1 - - - - 0.000000000000000000000000000000000001499 144.0
SYD3_k127_2263021_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 2.07e-245 776.0
SYD3_k127_2263021_1 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000002149 163.0
SYD3_k127_2263021_2 Acetyltransferase (GNAT) domain - - - 0.00000000001357 69.0
SYD3_k127_2267416_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.0000000000000000000000000000000000000000000000000000000157 220.0
SYD3_k127_2267416_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000004325 183.0
SYD3_k127_2269533_0 response to heat K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003825 308.0
SYD3_k127_2269533_1 acr, cog1993 K09137 - - 0.00000000000000000000000000000000000003099 147.0
SYD3_k127_2269533_2 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.00000000000000000000000001808 115.0
SYD3_k127_2269533_3 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000007405 99.0
SYD3_k127_2269533_4 PAP2 superfamily K19302 - 3.6.1.27 0.000005504 54.0
SYD3_k127_2304293_0 PFAM SMP-30 Gluconolaconase K20952 - - 0.0000000000000000000000000000000000000000000117 168.0
SYD3_k127_2304293_1 Radical SAM domain protein - - - 0.0000000000000000000000001887 108.0
SYD3_k127_2324284_0 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003023 282.0
SYD3_k127_2324284_1 MMPL family K06994 - - 0.00000000000000000000000000000000000000000000000008172 203.0
SYD3_k127_2324284_2 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000000005148 91.0
SYD3_k127_232481_0 Arsenical pump membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 406.0
SYD3_k127_232481_1 Sodium/hydrogen exchanger family - - - 0.0000001525 54.0
SYD3_k127_232481_2 Cbs domain - - - 0.00004651 54.0
SYD3_k127_2326972_0 Archaea bacterial proteins of unknown function K06921 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002291 276.0
SYD3_k127_2326972_1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001196 252.0
SYD3_k127_2326972_10 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0001512 54.0
SYD3_k127_2326972_2 Phage integrase family - - - 0.000000000000000000000000000000000000000000005096 170.0
SYD3_k127_2326972_3 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000004745 161.0
SYD3_k127_2326972_4 Peptidoglycan-binding domain 1 protein - - - 0.00000000000000000000002454 112.0
SYD3_k127_2326972_5 PFAM DinB family protein - - - 0.0000000000000000000006507 101.0
SYD3_k127_2326972_6 Protein of unknown function (DUF3105) - - - 0.0000000000000000000152 100.0
SYD3_k127_2326972_7 insertion element IS1121 transposase - - - 0.00000000000001259 78.0
SYD3_k127_2326972_8 - - - - 0.000000002433 64.0
SYD3_k127_2326972_9 - - - - 0.00000001298 66.0
SYD3_k127_2360492_0 metallocarboxypeptidase activity K05996 - 3.4.17.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009834 405.0
SYD3_k127_2360492_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000003832 213.0
SYD3_k127_2360492_2 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000002559 145.0
SYD3_k127_2360492_3 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000005351 149.0
SYD3_k127_2360492_4 PIN domain - - - 0.00002225 51.0
SYD3_k127_2360492_5 - - - - 0.00007002 48.0
SYD3_k127_2438284_0 2-oxoglutarate dehydrogenase C-terminal K00164 - 1.2.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 553.0
SYD3_k127_2438284_1 Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000000000000000000000000000000001983 186.0
SYD3_k127_2438284_2 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000002765 169.0
SYD3_k127_2438284_3 YGGT family K02221 - - 0.00000000000000000000000000000005607 133.0
SYD3_k127_2438284_4 PFAM cytochrome bd ubiquinol oxidase subunit II K00426 - 1.10.3.14 0.00000000000000000000000002893 112.0
SYD3_k127_2438284_5 Belongs to the UPF0235 family K09131 - - 0.000000000000000002009 88.0
SYD3_k127_2450758_0 Belongs to the peptidase M16 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007482 446.0
SYD3_k127_2450758_1 membrane protein (DUF2079) - - - 0.0000000129 64.0
SYD3_k127_246058_0 Permease MlaE K02066 - - 0.00000000000000000001476 98.0
SYD3_k127_246058_1 PFAM Mammalian cell entry related domain protein K06192 - - 0.00000000000000000003053 99.0
SYD3_k127_2734005_0 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009595 315.0
SYD3_k127_2734005_1 histone H2A K63-linked ubiquitination - - - 0.00000002436 67.0
SYD3_k127_2734787_0 SurA N-terminal domain K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000009041 273.0
SYD3_k127_2734787_1 PPIC-type PPIASE domain K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000002225 251.0
SYD3_k127_2734787_2 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000004241 83.0
SYD3_k127_2747046_0 COG3209 Rhs family protein - - - 0.00000000000000000000000000000000000000000000000002417 190.0
SYD3_k127_2747046_1 Belongs to the sigma-70 factor family K03088 - - 0.00000000000000000000406 100.0
SYD3_k127_2747046_2 Belongs to the sigma-70 factor family K03088 - - 0.00000000000000002904 91.0
SYD3_k127_2747046_5 Threonyl alanyl tRNA synthetase SAD K07050 - - 0.000001597 60.0
SYD3_k127_2750994_0 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000002479 212.0
SYD3_k127_2750994_1 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000006802 147.0
SYD3_k127_2751438_0 Major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 319.0
SYD3_k127_2799408_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000968 344.0
SYD3_k127_2799408_1 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000001739 136.0
SYD3_k127_280538_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 2.068e-195 616.0
SYD3_k127_280538_1 Acyl-CoA dehydrogenase, C-terminal domain K06446 - - 0.0000000000000007709 77.0
SYD3_k127_2828666_0 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007355 379.0
SYD3_k127_2828666_1 PTS system mannose/fructose/sorbose family IID component K02796 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006814 332.0
SYD3_k127_2828666_10 PTS system sorbose subfamily IIB component - - - 0.000000000000000000000000000000001734 134.0
SYD3_k127_2828666_11 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.0000000000000000000000000000004846 128.0
SYD3_k127_2828666_12 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.0000000000000000000000000001351 127.0
SYD3_k127_2828666_13 phosphatase activity - - - 0.000000000000000000000014 111.0
SYD3_k127_2828666_14 Belongs to the Fur family K03711 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0008270,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010035,GO:0010038,GO:0010043,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0042221,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043565,GO:0044212,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046872,GO:0046914,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000001203 90.0
SYD3_k127_2828666_15 phosphoenolpyruvate-dependent sugar phosphotransferase system - - - 0.0000000000815 74.0
SYD3_k127_2828666_2 PolyA polymerase K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 329.0
SYD3_k127_2828666_3 PFAM Neutral alkaline nonlysosomal ceramidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003817 302.0
SYD3_k127_2828666_4 PFAM sugar isomerase (SIS) K00820 - 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003605 291.0
SYD3_k127_2828666_5 SIS domain - - - 0.0000000000000000000000000000000000000000000000000000000001499 213.0
SYD3_k127_2828666_6 PTS system mannose/fructose/sorbose family IID component K02796 - - 0.0000000000000000000000000000000000000000000000000000000003597 206.0
SYD3_k127_2828666_7 SMART HNH nuclease - - - 0.0000000000000000000000000000000000000000000000000000000653 201.0
SYD3_k127_2828666_8 SIS domain - - - 0.000000000000000000000000000000000000000000000001974 190.0
SYD3_k127_2828666_9 ZIP Zinc transporter K07238 - - 0.0000000000000000000000000000000002241 141.0
SYD3_k127_2828668_0 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity K06215 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016020,GO:0016829,GO:0016840,GO:0016843,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0040007,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 4.3.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 429.0
SYD3_k127_2828668_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01007,K08483 - 2.7.3.9,2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 395.0
SYD3_k127_2828668_2 R3H domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 348.0
SYD3_k127_2828668_3 PTS system mannose/fructose/sorbose family IID component K02796 - - 0.000000000000000000000000000000000000000000000000000000000000000000001923 240.0
SYD3_k127_2828668_4 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.00000000000000000000000000000000000000000000000000000000000000005798 242.0
SYD3_k127_2828668_5 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.000000000000000000000000000000000000000000000000000001241 221.0
SYD3_k127_2828668_6 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000002502 201.0
SYD3_k127_2828668_7 PTS HPr component phosphorylation site K11189 - - 0.0000000000000000000003014 99.0
SYD3_k127_2828668_8 - - - - 0.00001621 57.0
SYD3_k127_2849659_0 cyclic-guanylate-specific phosphodiesterase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005342 388.0
SYD3_k127_2849659_1 Belongs to the peptidase M50B family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006609 329.0
SYD3_k127_2849659_2 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 308.0
SYD3_k127_2849659_3 MoeA domain protein domain I and II K00963,K03750 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006464,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0018315,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0032324,GO:0034641,GO:0036211,GO:0042040,GO:0042278,GO:0043170,GO:0043412,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061598,GO:0061599,GO:0070566,GO:0071704,GO:0071944,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.10.1.1,2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006101 304.0
SYD3_k127_2849659_4 MoaC family K03637 - 4.6.1.17 0.000000000000000000000000001436 115.0
SYD3_k127_2849659_5 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.00000000000000000003285 96.0
SYD3_k127_2849659_6 Sugar efflux transporter for intercellular exchange K15383 - - 0.000000000000000002416 93.0
SYD3_k127_2849659_7 TIGRFAM integral membrane protein TIGR01906 - - - 0.0000000001294 70.0
SYD3_k127_2849659_8 - - - - 0.0000007681 58.0
SYD3_k127_2854907_0 ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009117 389.0
SYD3_k127_2854907_1 RimK-like ATP-grasp domain K03802 - 6.3.2.29,6.3.2.30 0.00000000000005328 73.0
SYD3_k127_2873257_0 ABC transporter substrate-binding protein K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 413.0
SYD3_k127_2873257_1 transmembrane transport K02025,K15771 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 378.0
SYD3_k127_2873257_2 ABC-type sugar transport system, permease component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 343.0
SYD3_k127_2873257_3 PFAM Glycoside hydrolase 15-related - - - 0.00000000000000000000000000000000000000000000000000001004 213.0
SYD3_k127_2874709_0 Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001423 264.0
SYD3_k127_2885877_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K18361 - 1.17.5.1,3.1.2.25 0.0 1341.0
SYD3_k127_2885877_1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 2.108e-198 635.0
SYD3_k127_2885877_10 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005154 366.0
SYD3_k127_2885877_11 Aldo Keto reductase K07079 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004684 346.0
SYD3_k127_2885877_12 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 333.0
SYD3_k127_2885877_13 BadF/BadG/BcrA/BcrD ATPase family K04115 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006749 282.0
SYD3_k127_2885877_14 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000000002177 219.0
SYD3_k127_2885877_15 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000000000000000000007222 194.0
SYD3_k127_2885877_16 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.00000000000000000000000000000000000000000000000178 188.0
SYD3_k127_2885877_17 oxidoreductase gamma subunit K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000000001876 173.0
SYD3_k127_2885877_18 Rubrerythrin - - - 0.0000000000000000000000000007346 129.0
SYD3_k127_2885877_19 Isoprenylcysteine carboxyl methyltransferase (ICMT) family K00587 - 2.1.1.100 0.00000000000000000004481 104.0
SYD3_k127_2885877_2 Alpha-amylase domain K01176 - 3.2.1.1 8.193e-196 636.0
SYD3_k127_2885877_20 Bacterial regulatory proteins, tetR family K09017 - - 0.0000000000000000000616 104.0
SYD3_k127_2885877_21 Belongs to the ABC transporter superfamily K05816,K10112 - 3.6.3.20 0.0000001279 64.0
SYD3_k127_2885877_3 benzoyl-CoA reductase K04113 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 581.0
SYD3_k127_2885877_4 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 503.0
SYD3_k127_2885877_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07538 - 1.1.1.368 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 492.0
SYD3_k127_2885877_6 Enoyl-CoA hydratase/isomerase K07539 - 3.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 475.0
SYD3_k127_2885877_7 BadF/BadG/BcrA/BcrD ATPase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005801 450.0
SYD3_k127_2885877_8 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 419.0
SYD3_k127_2885877_9 benzoyl-CoA reductase K04112 - 1.3.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 389.0
SYD3_k127_2887090_0 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 367.0
SYD3_k127_2887090_1 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001314 277.0
SYD3_k127_2887090_2 Activator of Hsp90 ATPase - - - 0.00000000000000000000000000000000000000000000000000000001263 201.0
SYD3_k127_2887090_3 Flavodoxin domain K00230 - 1.3.5.3 0.00000000000000000000000000000000005305 143.0
SYD3_k127_2887090_4 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000004775 121.0
SYD3_k127_2887090_6 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000006091 81.0
SYD3_k127_2887090_7 Glyoxalase-like domain - - - 0.00000001267 61.0
SYD3_k127_28877_0 Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state - - - 4.618e-217 689.0
SYD3_k127_28877_1 Two component response regulator for the phosphate regulon K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000001684 236.0
SYD3_k127_28877_2 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000001222 237.0
SYD3_k127_28877_3 Catalyzes the formation of 2-oxoglutarate from isocitrate K00030 - 1.1.1.41 0.0000000000000000000000000000000000000000000000000001099 187.0
SYD3_k127_28877_4 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000000000000008739 127.0
SYD3_k127_2891208_0 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000862 484.0
SYD3_k127_2891208_1 MacB-like periplasmic core domain - - - 0.0000000000000000000003152 99.0
SYD3_k127_291854_0 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 347.0
SYD3_k127_291854_1 modulation protein K05808 - - 0.0000000000000000000000000000000000000000000000009391 177.0
SYD3_k127_291854_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.0000000000000000000000000002502 114.0
SYD3_k127_2938281_0 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 367.0
SYD3_k127_2938281_1 Arginase family K01480 - 3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004755 282.0
SYD3_k127_2938281_2 Luciferase-like monooxygenase - - - 0.000000000000000000000000002044 116.0
SYD3_k127_2956382_0 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 558.0
SYD3_k127_2956382_1 Pfam Zn-finger in ubiquitin-hydrolases and other protein K03455 - - 0.000000000000000000000000000000000005819 138.0
SYD3_k127_2975434_0 AAA ATPase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000911 471.0
SYD3_k127_2975434_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000001508 235.0
SYD3_k127_2975434_2 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000004451 180.0
SYD3_k127_2975434_3 InterPro IPR014922 - - - 0.00000000000000000000000000000000000000000000005773 181.0
SYD3_k127_2975434_4 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000001708 175.0
SYD3_k127_2975434_5 - - - - 0.000000000000000001911 98.0
SYD3_k127_2975434_6 - - - - 0.000000000003608 76.0
SYD3_k127_2975434_7 Mazg nucleotide pyrophosphohydrolase - - - 0.00000000001044 67.0
SYD3_k127_2975434_8 Chaperone - - - 0.0001588 51.0
SYD3_k127_2983587_0 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000001878 201.0
SYD3_k127_2983587_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000001304 148.0
SYD3_k127_2983587_2 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000002644 132.0
SYD3_k127_2983587_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000000369 83.0
SYD3_k127_2983587_4 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031225,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000001117 88.0
SYD3_k127_2983587_5 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.000001013 56.0
SYD3_k127_2994507_0 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005733 420.0
SYD3_k127_2994507_1 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006282,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032774,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001020,GO:2001141 3.4.21.88 0.00000000005356 66.0
SYD3_k127_3083478_0 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000005673 234.0
SYD3_k127_3083478_1 Transcriptional regulatory protein, C terminal K02483,K07665 - - 0.000000000000000000000000000000000000000000000000000000000004487 222.0
SYD3_k127_3137371_0 iron-nicotianamine transmembrane transporter activity - GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0008150,GO:0016020,GO:0022857,GO:0051179,GO:0051234,GO:0055085 - 9.709e-310 957.0
SYD3_k127_3157405_0 secondary active sulfate transmembrane transporter activity K06901 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005029 588.0
SYD3_k127_3157405_1 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000002118 174.0
SYD3_k127_3193315_0 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009202 303.0
SYD3_k127_3193315_1 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007025 256.0
SYD3_k127_3193315_2 Metal-dependent hydrolase - - - 0.00000000000000000000000000009257 120.0
SYD3_k127_3193315_3 MviN-like protein K03980 - - 0.00000008603 61.0
SYD3_k127_3239422_0 Belongs to the peptidase M50B family - - - 0.00000000000000000000000000000000000000000000007684 178.0
SYD3_k127_3239422_1 Putative peptidoglycan binding domain K21470 - - 0.00000000000000000000000000000000000000153 159.0
SYD3_k127_3248126_0 DNA processing protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007316 444.0
SYD3_k127_3248126_1 peptidoglycan-binding protein, lysm - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002683 409.0
SYD3_k127_3248126_2 Belongs to the Smg family K03747 - - 0.0000000000000001268 79.0
SYD3_k127_3272713_0 FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009616 615.0
SYD3_k127_3272713_1 FGGY family of carbohydrate kinases, N-terminal domain K00853 - 2.7.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009127 588.0
SYD3_k127_3272713_10 Belongs to the glycerate kinase type-1 family K00865 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009715 347.0
SYD3_k127_3272713_11 electron transport chain K00347,K03614,K21163 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 302.0
SYD3_k127_3272713_12 Branched-chain amino acid transport system / permease component K10440,K10560 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001821 290.0
SYD3_k127_3272713_13 transcriptional regulator, DeoR family K03436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003824 278.0
SYD3_k127_3272713_14 Dehydrogenase E1 component K21416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008512 277.0
SYD3_k127_3272713_15 GTP cyclohydrolase I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005707 261.0
SYD3_k127_3272713_16 PA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006569 266.0
SYD3_k127_3272713_17 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004236 277.0
SYD3_k127_3272713_18 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000001745 230.0
SYD3_k127_3272713_19 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000001925 190.0
SYD3_k127_3272713_2 Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system K02056,K10441 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 557.0
SYD3_k127_3272713_20 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K00082,K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000005884 169.0
SYD3_k127_3272713_21 Dak2 K05879 - 2.7.1.121 0.000000000000000000000000000000000000002181 160.0
SYD3_k127_3272713_22 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000117 139.0
SYD3_k127_3272713_23 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K01838 - 5.4.2.6 0.0000000000000000000000000000000007911 139.0
SYD3_k127_3272713_24 Cell envelope-related transcriptional attenuator domain - - - 0.000000000000000000000000006066 123.0
SYD3_k127_3272713_25 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000001112 84.0
SYD3_k127_3272713_26 Ureidoglycolate lyase K01483 - 4.3.2.3 0.0000000000003659 79.0
SYD3_k127_3272713_27 Copper binding proteins, plastocyanin/azurin family - - - 0.000000000007065 74.0
SYD3_k127_3272713_28 - - - - 0.0000000003422 70.0
SYD3_k127_3272713_29 acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.00000000104 70.0
SYD3_k127_3272713_3 peptidase M42 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004132 512.0
SYD3_k127_3272713_31 Aminoglycoside phosphotransferase K18844 - - 0.0000718 50.0
SYD3_k127_3272713_4 Dak1 domain K00863,K05878 - 2.7.1.121,2.7.1.28,2.7.1.29,4.6.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 479.0
SYD3_k127_3272713_5 Periplasmic binding protein domain K02058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007307 439.0
SYD3_k127_3272713_6 Reductase C-terminal K00529 - 1.18.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 386.0
SYD3_k127_3272713_7 PFAM photosystem I assembly BtpA K06971 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 387.0
SYD3_k127_3272713_8 alcohol dehydrogenase K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004948 362.0
SYD3_k127_3272713_9 Transketolase, pyrimidine binding domain K21417 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007893 354.0
SYD3_k127_3350620_0 2-oxoglutarate dehydrogenase C-terminal K00164 - 1.2.4.2 0.0 1202.0
SYD3_k127_3350620_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 397.0
SYD3_k127_3350620_10 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.00000000000000000000000001446 113.0
SYD3_k127_3350620_11 diguanylate cyclase (GGDEF domain) - - - 0.0000000000000000006674 103.0
SYD3_k127_3350620_12 protein maturation K13628,K15724 - - 0.0000003906 61.0
SYD3_k127_3350620_13 helix_turn_helix, Lux Regulon - - - 0.000001283 56.0
SYD3_k127_3350620_14 HNH endonuclease - - - 0.00005527 51.0
SYD3_k127_3350620_2 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 302.0
SYD3_k127_3350620_3 Methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000008114 260.0
SYD3_k127_3350620_4 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000006141 253.0
SYD3_k127_3350620_5 helix_turn_helix, Lux Regulon K02479 - - 0.00000000000000000000000000000000000000000000000000000000007568 213.0
SYD3_k127_3350620_6 histidine kinase, dimerisation and phosphoacceptor region - - - 0.00000000000000000000000000000000000000000000000000000004117 226.0
SYD3_k127_3350620_7 Uncharacterized ACR, COG1993 K09137 - - 0.00000000000000000000000000000000000009731 146.0
SYD3_k127_3350620_8 CGNR zinc finger - - - 0.0000000000000000000000000000000000004285 146.0
SYD3_k127_3350620_9 - - - - 0.000000000000000000000000000001945 127.0
SYD3_k127_3400161_0 TIGRFAM Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 316.0
SYD3_k127_3400161_1 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000001691 221.0
SYD3_k127_3400161_2 Zn peptidase - - - 0.0000000000000000000000000000000000000001503 166.0
SYD3_k127_3429044_0 Helix-turn-helix domain of transposase family ISL3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 329.0
SYD3_k127_3429044_1 Glucoamylase and related glycosyl hydrolases - - - 0.00000000000000000000000000000000000000000000002036 180.0
SYD3_k127_3429044_2 PFAM multicopper oxidase type 2 - - - 0.00000000000000000000000009841 112.0
SYD3_k127_3489760_0 Transketolase, pyrimidine binding domain K00162 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 492.0
SYD3_k127_3489760_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005252 383.0
SYD3_k127_3489760_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.0000000000000000000000000000000000002332 151.0
SYD3_k127_3499119_0 symporter activity K03307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 457.0
SYD3_k127_356345_0 FAD linked oxidase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 561.0
SYD3_k127_356345_1 methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000005064 212.0
SYD3_k127_356345_2 DinB family - - - 0.000000000000000000000000000000000000000002611 162.0
SYD3_k127_356345_3 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000003955 124.0
SYD3_k127_356345_4 ASCH - - - 0.000000000000000000000000000009438 132.0
SYD3_k127_3645168_0 Peptidase s1 and s6 chymotrypsin hap K08372 - - 0.000000001749 66.0
SYD3_k127_3686695_0 von Willebrand factor (vWF) type A domain - - - 1.036e-200 653.0
SYD3_k127_3686695_1 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005316 599.0
SYD3_k127_3686695_10 type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis - - - 0.000000000000000000000000000001107 140.0
SYD3_k127_3686695_11 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000001869 118.0
SYD3_k127_3686695_12 Protein of unknown function (DUF1232) - - - 0.0000000000000211 79.0
SYD3_k127_3686695_13 - - - - 0.00000004911 66.0
SYD3_k127_3686695_14 BFD-like [2Fe-2S] binding domain K00111 - 1.1.5.3 0.0000953 54.0
SYD3_k127_3686695_2 Aldehyde dehydrogenase family K00128 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 528.0
SYD3_k127_3686695_3 F420-dependent oxidoreductase, G6PDH family K15510 - 1.1.98.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 400.0
SYD3_k127_3686695_4 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000882 383.0
SYD3_k127_3686695_5 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007589 306.0
SYD3_k127_3686695_6 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000789 200.0
SYD3_k127_3686695_7 COG1247 Sortase and related acyltransferases K03823 - 2.3.1.183 0.00000000000000000000000000000000000000000000000000007005 199.0
SYD3_k127_3686695_8 histidine kinase HAMP region domain protein K02484,K07642 - 2.7.13.3 0.00000000000000000000000000000000000000000000005088 188.0
SYD3_k127_3686695_9 PFAM flavin reductase domain protein FMN-binding K21185 - - 0.0000000000000000000000000000009475 132.0
SYD3_k127_369927_0 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K05559,K05565 - - 3.358e-197 626.0
SYD3_k127_37321_0 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 366.0
SYD3_k127_37321_1 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001552 272.0
SYD3_k127_37321_2 Flavodoxin domain K00230 - 1.3.5.3 0.000000000000000000000000000000000000000001312 162.0
SYD3_k127_37321_3 efflux transmembrane transporter activity K02004 - - 0.000000003807 64.0
SYD3_k127_3750755_0 Histidine kinase-like ATPases - - - 0.00000000000000003358 93.0
SYD3_k127_3753630_0 Serine hydrolase (FSH1) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 575.0
SYD3_k127_3753630_1 Major facilitator Superfamily K00943,K08217,K18833 - 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 420.0
SYD3_k127_3753630_2 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009617 383.0
SYD3_k127_3753630_3 PFAM Squalene phytoene synthase K00801 - 2.5.1.21 0.000000001507 72.0
SYD3_k127_3819672_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005189 404.0
SYD3_k127_3819672_1 SMART Signal transduction response regulator, receiver region - - - 0.00000000000000000000000000000000000000000000000000000000000000134 224.0
SYD3_k127_3819672_2 Cache domain - - - 0.00000000000000000000000000000002777 126.0
SYD3_k127_39640_0 aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 339.0
SYD3_k127_39640_1 secondary active sulfate transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001407 250.0
SYD3_k127_3964051_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 600.0
SYD3_k127_3964051_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006172,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009133,GO:0009135,GO:0009136,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009179,GO:0009180,GO:0009185,GO:0009188,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016311,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046031,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990837 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 484.0
SYD3_k127_3964051_10 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000008841 243.0
SYD3_k127_3964051_11 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000005584 239.0
SYD3_k127_3964051_12 Fungal trichothecene efflux pump (TRI12) - - - 0.000000000000000000000000000000000000000000000000000000000002212 235.0
SYD3_k127_3964051_13 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000123 222.0
SYD3_k127_3964051_14 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.0000000000000000000000000000000000000000000000000002759 190.0
SYD3_k127_3964051_15 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000003046 195.0
SYD3_k127_3964051_16 SMART phosphoesterase PHP domain protein - - - 0.000000000000000000000000000000000000000000003586 183.0
SYD3_k127_3964051_17 Bifunctional nuclease K08999 - - 0.0000000000000000000000000000000000000001709 156.0
SYD3_k127_3964051_18 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.00000000000000000000000000000000000001494 155.0
SYD3_k127_3964051_19 Glycosyl transferase K00728 - 2.4.1.109 0.00000000000000000000000000000000000002221 169.0
SYD3_k127_3964051_2 Glycosyltransferase family 20 K00697 - 2.4.1.15,2.4.1.347 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 432.0
SYD3_k127_3964051_20 Membrane protein insertase, YidC Oxa1 family K03217 - - 0.000000000000000000000000000000005449 143.0
SYD3_k127_3964051_21 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000002663 144.0
SYD3_k127_3964051_22 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K00999 GO:0003674,GO:0003824,GO:0003881,GO:0003882,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0030312,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.7.8.11,2.7.8.5 0.00000000000000000000000000000003256 136.0
SYD3_k127_3964051_23 PFAM single-stranded nucleic acid binding R3H domain protein K06346 - - 0.000000000000000000000000000001003 133.0
SYD3_k127_3964051_24 lipid A biosynthesis acyltransferase K22311 GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016746,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.3.1.265 0.0000000000000000000000000003409 131.0
SYD3_k127_3964051_25 lipid A biosynthesis acyltransferase K22311 GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016746,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.3.1.265 0.000000000000000000000000004323 125.0
SYD3_k127_3964051_26 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000001165 104.0
SYD3_k127_3964051_27 Flavodoxin K03809 - 1.6.5.2 0.00000000000000000003194 96.0
SYD3_k127_3964051_28 Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation K09811 - - 0.00000000000000000007956 93.0
SYD3_k127_3964051_29 Phage shock protein C, PspC K03973 - - 0.0000000000000000005094 93.0
SYD3_k127_3964051_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003475 385.0
SYD3_k127_3964051_30 TOBE domain K10112 - - 0.00000000000000003532 91.0
SYD3_k127_3964051_31 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 GO:0008150,GO:0040007 3.1.26.5 0.000000000000433 75.0
SYD3_k127_3964051_32 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000000659 67.0
SYD3_k127_3964051_33 DNA-binding transcription factor activity K03892 - - 0.00000000003637 68.0
SYD3_k127_3964051_34 Non-essential cell division protein that could be required for efficient cell constriction - - - 0.000000007998 68.0
SYD3_k127_3964051_35 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 0.00000001713 67.0
SYD3_k127_3964051_36 protein serine/threonine phosphatase activity - - - 0.0000002447 64.0
SYD3_k127_3964051_37 membrane - - - 0.0000003624 62.0
SYD3_k127_3964051_38 - - - - 0.0001588 51.0
SYD3_k127_3964051_4 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005905 350.0
SYD3_k127_3964051_5 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 348.0
SYD3_k127_3964051_6 Glycosyl transferase 4-like domain K08256 - 2.4.1.345 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 323.0
SYD3_k127_3964051_7 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 313.0
SYD3_k127_3964051_8 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 293.0
SYD3_k127_3964051_9 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000007413 255.0
SYD3_k127_4088182_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 4.395e-300 951.0
SYD3_k127_4088182_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 1.728e-299 940.0
SYD3_k127_4088182_10 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002826 269.0
SYD3_k127_4088182_11 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007318 267.0
SYD3_k127_4088182_12 Protein of unknown function (DUF1385) K09153 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001265 266.0
SYD3_k127_4088182_13 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000279 226.0
SYD3_k127_4088182_14 cell division ATP-binding protein FtsE K09812 - - 0.00000000000000000000000000000000000000000000000000000005926 206.0
SYD3_k127_4088182_15 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.000000000000000000000000000000000000000000327 171.0
SYD3_k127_4088182_16 galactose-6-phosphate isomerase activity K00761,K01808 - 2.4.2.9,5.3.1.6 0.0000000000000000000000000000000000000000004808 164.0
SYD3_k127_4088182_17 - - - - 0.0000000000000000000000000000000000000008786 151.0
SYD3_k127_4088182_18 Telomere recombination K07566 - 2.7.7.87 0.00000000000000000000000000000000000005685 158.0
SYD3_k127_4088182_19 Protein of unknown function DUF126 K09128 - - 0.0000000000000000000000000002204 129.0
SYD3_k127_4088182_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034335,GO:0034641,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0046872,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363 5.99.1.3 4.579e-251 800.0
SYD3_k127_4088182_20 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000002907 119.0
SYD3_k127_4088182_21 Ribosomal L27 protein K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000008059 115.0
SYD3_k127_4088182_22 PFAM thioesterase superfamily - - - 0.00000000000000000001155 102.0
SYD3_k127_4088182_23 50S ribosomal protein L31 K02909 - - 0.000000000000000002571 97.0
SYD3_k127_4088182_24 Uncharacterized protein conserved in bacteria (DUF2344) - - - 0.00000000000000004842 90.0
SYD3_k127_4088182_25 - - - - 0.0002689 46.0
SYD3_k127_4088182_26 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.0003498 50.0
SYD3_k127_4088182_3 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835,K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 427.0
SYD3_k127_4088182_4 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 411.0
SYD3_k127_4088182_5 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 405.0
SYD3_k127_4088182_6 Protein of unknown function (DUF521) K09123 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004898 402.0
SYD3_k127_4088182_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 342.0
SYD3_k127_4088182_8 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 331.0
SYD3_k127_4088182_9 CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005152 300.0
SYD3_k127_4094460_0 Uncharacterised protein family UPF0052 K11212 - 2.7.8.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004514 344.0
SYD3_k127_4094460_1 F420-0:Gamma-glutamyl ligase K12234 - 6.3.2.31,6.3.2.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001092 277.0
SYD3_k127_4094460_2 Protein kinase domain K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000004097 214.0
SYD3_k127_4094460_3 COGs COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase - - - 0.00000000000000000000000000000000000000000000000000000002896 210.0
SYD3_k127_4094460_4 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000001657 187.0
SYD3_k127_4094460_5 Guanylyltransferase that catalyzes the activation of 2- phospho-L-lactate (LP) as (2S)-lactyl-2-diphospho-5'-guanosine (LPPG), via the condensation of LP with GTP. Is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor K14941 - 2.7.7.68 0.000000000000000000000000000000004635 140.0
SYD3_k127_4094460_6 PFAM pyridoxamine 5'-phosphate oxidase-related - - - 0.000000000000000002261 89.0
SYD3_k127_4096817_0 3-methyl-2-oxobutanoate hydroxymethyltransferase activity K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000695 290.0
SYD3_k127_4096817_1 HD superfamily hydrolase involved in NAD metabolism K00950 - 2.7.6.3 0.00000000000000000000000000000003674 136.0
SYD3_k127_4096817_2 Chemotaxis sensory transducer K03406 - - 0.000000000000000000000001118 112.0
SYD3_k127_4098643_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.0000000000000000000000000000000000000000000000000000000000000000001281 245.0
SYD3_k127_4126967_0 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 321.0
SYD3_k127_4126967_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000001421 263.0
SYD3_k127_4149642_0 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000389 304.0
SYD3_k127_4149642_1 Tetracyclin repressor, C-terminal all-alpha domain - - - 0.000000000000000000000000000000000000000000000000000000002293 208.0
SYD3_k127_4149642_2 sequence-specific DNA binding - - - 0.0000000003948 70.0
SYD3_k127_4149642_3 Beta-lactamase - - - 0.00000007233 58.0
SYD3_k127_4165204_0 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008822 322.0
SYD3_k127_4165204_1 FtsX-like permease family K02004 - - 0.0000000000001659 74.0
SYD3_k127_4169368_0 Cation transport ATPase (P-type) K01537 - 3.6.3.8 5.597e-320 1002.0
SYD3_k127_4169368_1 radical SAM domain protein - - - 4.934e-226 712.0
SYD3_k127_4169368_2 heavy metal translocating P-type ATPase K01533 - 3.6.3.4 5.165e-222 700.0
SYD3_k127_4169368_3 Glycine cleavage T-protein C-terminal barrel domain K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006628 460.0
SYD3_k127_4169368_4 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 405.0
SYD3_k127_4169368_5 Divalent cation transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 368.0
SYD3_k127_4169368_6 Universal stress protein family - - - 0.0000001151 65.0
SYD3_k127_4197677_0 4-Hydroxyphenylpyruvate dioxygenase K00457,K16421 GO:0003674,GO:0003824,GO:0003868,GO:0006082,GO:0006520,GO:0006570,GO:0006572,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009987,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0051213,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.27,1.13.11.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 502.0
SYD3_k127_4197677_1 ATPases associated with a variety of cellular activities K16786,K16787 - - 0.000000000000000000000000000000000000000000000000000000000000000001427 238.0
SYD3_k127_4197677_10 SnoaL-like domain - - - 0.00001913 54.0
SYD3_k127_4197677_2 Phosphorylase superfamily K00772,K03784 - 2.4.2.1,2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000004398 234.0
SYD3_k127_4197677_3 ATPase activity K16786,K16787 - - 0.000000000000000000000000000000000000000000000000000004871 199.0
SYD3_k127_4197677_4 PFAM inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000004172 171.0
SYD3_k127_4197677_5 phosphorelay sensor kinase activity K16923,K18967 - 2.7.7.65 0.00000000000000000000000000000000000000002064 163.0
SYD3_k127_4197677_6 nUDIX hydrolase - GO:0003674,GO:0003824,GO:0016787,GO:0016817,GO:0016818 - 0.00000000000000000000000000000000000004324 154.0
SYD3_k127_4197677_7 Cobalt transport protein K16785 - - 0.00000000000000000000000000000000007466 145.0
SYD3_k127_4197677_8 GntR family K05799 - - 0.00000000213 68.0
SYD3_k127_4197677_9 Inosine-uridine preferring nucleoside hydrolase - - - 0.00000008886 58.0
SYD3_k127_4209067_0 P2 response regulator binding domain K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 458.0
SYD3_k127_4209067_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000557 291.0
SYD3_k127_4209067_2 CheC-like family K03410 - - 0.000000000000000000000000000000000000000000000000000000000000000004645 231.0
SYD3_k127_4209067_3 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000000000000000000000000000000000000000003285 218.0
SYD3_k127_4209067_4 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000004699 154.0
SYD3_k127_4209067_5 CheW domain protein K03408 - - 0.0000000001491 69.0
SYD3_k127_4210084_0 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007591 303.0
SYD3_k127_4210084_1 DNA repair protein - - - 0.0000000000000000000000000000000000000000000000000008749 190.0
SYD3_k127_4215251_0 Dead deah box helicase domain protein K05592 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001712 275.0
SYD3_k127_4215251_1 Glycosyl transferase, family 2 K21349 - 2.4.1.268 0.0000000000000000000000000000000000000000000000000001409 191.0
SYD3_k127_4215251_2 DNA ligase K01971 - 6.5.1.1 0.000000002131 67.0
SYD3_k127_42189_0 AAA ATPase domain - - - 1.552e-293 921.0
SYD3_k127_4219589_0 AAA ATPase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 440.0
SYD3_k127_4219589_1 Protein of unknown function (DUF4242) - - - 0.0002962 49.0
SYD3_k127_4228920_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001701 247.0
SYD3_k127_4228920_1 lyase activity - - - 0.0000000000000000001465 104.0
SYD3_k127_4228920_2 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.00000007933 60.0
SYD3_k127_424038_0 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000001296 133.0
SYD3_k127_424038_1 Glycosyl transferases group 1 - - - 0.00000000001009 71.0
SYD3_k127_4252759_0 Two component transcriptional regulator, winged helix family K02483,K07662 - - 0.000000000000000000000000000000000000000000000000000000057 213.0
SYD3_k127_4252759_1 signal transduction histidine kinase K07642 - 2.7.13.3 0.00000000000007988 80.0
SYD3_k127_4258649_0 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 289.0
SYD3_k127_4258649_1 COG1226 Kef-type K transport systems K10716 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0042802,GO:0044464,GO:0071944 - 0.0000000000001388 76.0
SYD3_k127_4258649_2 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.00000000002175 75.0
SYD3_k127_4264009_0 transport system involved in gliding motility, auxiliary K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008189 297.0
SYD3_k127_4264009_1 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000001532 226.0
SYD3_k127_4264009_2 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000008388 156.0
SYD3_k127_4292911_0 M6 family metalloprotease domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 562.0
SYD3_k127_4292911_1 regulation of translation K03530 - - 0.000000000000000000000000000001248 123.0
SYD3_k127_4292911_2 Alpha/beta hydrolase family - - - 0.00000000000000000006445 100.0
SYD3_k127_4292911_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000001913 95.0
SYD3_k127_4296329_0 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K09461 - 1.14.13.40 6.487e-197 620.0
SYD3_k127_4299748_0 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000008148 255.0
SYD3_k127_4299748_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000255 224.0
SYD3_k127_4299969_0 His Kinase A (phosphoacceptor) domain - - - 8.441e-220 719.0
SYD3_k127_4299969_1 Aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004851 274.0
SYD3_k127_4346060_0 PFAM carboxyl transferase K01969,K15052 - 2.1.3.15,6.4.1.3,6.4.1.4 2.493e-245 768.0
SYD3_k127_4346060_1 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 4.116e-202 639.0
SYD3_k127_4346060_10 GGDEF domain - - - 0.00000000000000000000000002467 126.0
SYD3_k127_4346060_11 GlcNAc-PI de-N-acetylase K22135 - - 0.0000000000000000000000005403 117.0
SYD3_k127_4346060_12 Glyoxalase-like domain - - - 0.00000000000001214 85.0
SYD3_k127_4346060_13 Pfam:DUF59 - - - 0.000000000003615 70.0
SYD3_k127_4346060_2 carboxylase K01968 - 6.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002719 499.0
SYD3_k127_4346060_3 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006272 328.0
SYD3_k127_4346060_4 HMGL-like K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006039 301.0
SYD3_k127_4346060_5 Enoyl-CoA hydratase/isomerase K13766,K13779 - 4.2.1.18,4.2.1.57 0.00000000000000000000000000000000000000000000000000000000000004163 231.0
SYD3_k127_4346060_6 PFAM Inosine uridine-preferring nucleoside hydrolase K01239 - 3.2.2.1 0.000000000000000000000000000000000000000000000149 177.0
SYD3_k127_4346060_7 adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000302 159.0
SYD3_k127_4346060_8 Putative tRNA binding domain K06878 - - 0.00000000000000000000000000000000005807 136.0
SYD3_k127_4346060_9 GGDEF domain K02488 - 2.7.7.65 0.0000000000000000000000000002973 121.0
SYD3_k127_4356724_0 Amino acid permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 604.0
SYD3_k127_4371232_0 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000004689 203.0
SYD3_k127_4371232_1 Histidine kinase K13598 - 2.7.13.3 0.00000001543 66.0
SYD3_k127_43898_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000002065 201.0
SYD3_k127_43898_1 RibD C-terminal domain - - - 0.00000000000000000003724 91.0
SYD3_k127_4394006_0 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007839 339.0
SYD3_k127_4394006_1 FAD dependent oxidoreductase - - - 0.0000000000000000001108 95.0
SYD3_k127_4421141_0 Pyridoxal-dependent decarboxylase conserved domain K01593 - 4.1.1.105,4.1.1.28 4.801e-209 665.0
SYD3_k127_4421141_1 DinB family - - - 0.00000000000000000000004192 102.0
SYD3_k127_4421158_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1343.0
SYD3_k127_4421158_1 Putative carbohydrate binding domain K00702 - 2.4.1.20 0.0 1126.0
SYD3_k127_4421158_10 PFAM sigma-70 region 2 domain protein K03088 - - 0.00000000000000000000000000000000000000000002011 169.0
SYD3_k127_4421158_11 UvrD/REP helicase N-terminal domain K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000003466 174.0
SYD3_k127_4421158_12 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859,K07566 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24,2.7.7.87 0.0000000000000000000000000000000001142 150.0
SYD3_k127_4421158_13 Uracil DNA glycosylase superfamily K03648 - 3.2.2.27 0.000000000000000000000000008923 121.0
SYD3_k127_4421158_14 Putative Flp pilus-assembly TadE/G-like - - - 0.000000000000000000000008241 119.0
SYD3_k127_4421158_15 DnaJ molecular chaperone homology domain K05516 - - 0.00000000005566 71.0
SYD3_k127_4421158_16 TIGRFAM Flp pilus assembly protein CpaB K02279 - - 0.00000007014 63.0
SYD3_k127_4421158_17 PFAM TadE family protein - - - 0.00001312 55.0
SYD3_k127_4421158_18 Site-specific recombinase, DNA invertase Pin - - - 0.0005285 46.0
SYD3_k127_4421158_2 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 2.108e-287 900.0
SYD3_k127_4421158_3 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 1.56e-214 700.0
SYD3_k127_4421158_4 PFAM binding-protein-dependent transport systems inner membrane component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 391.0
SYD3_k127_4421158_5 carbohydrate transport K02027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 354.0
SYD3_k127_4421158_6 helix_turn _helix lactose operon repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 340.0
SYD3_k127_4421158_7 transmembrane transport K02025,K05814,K10118,K10237,K10241,K15771,K17235,K17242,K17316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 306.0
SYD3_k127_4421158_8 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000006196 256.0
SYD3_k127_4421158_9 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.00000000000000000000000000000000000000000000000000001286 195.0
SYD3_k127_4450836_0 PFAM peptidase S1 and S6, chymotrypsin Hap K08070 - 1.3.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000001245 258.0
SYD3_k127_4450836_1 dihydropteroate synthase K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000001669 246.0
SYD3_k127_4450836_2 Two component transcriptional regulator, winged helix family - - - 0.000000000000000000000000000000000000000000000000000000000001654 221.0
SYD3_k127_4450836_3 Histidine kinase K10681 - 2.7.13.3 0.0000000000000000000000000000000000000000000005597 186.0
SYD3_k127_4450836_4 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000001637 164.0
SYD3_k127_4450836_5 Uncharacterized protein conserved in bacteria (DUF2334) K06986 - - 0.000000000000000000000000000000000000006524 157.0
SYD3_k127_4450836_6 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000002257 141.0
SYD3_k127_4450836_7 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000002663 101.0
SYD3_k127_4452871_0 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000003282 267.0
SYD3_k127_4452871_1 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000008738 146.0
SYD3_k127_4480419_0 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005497 511.0
SYD3_k127_4480419_1 2-oxoglutarate dehydrogenase C-terminal K00164 - 1.2.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009162 443.0
SYD3_k127_4480419_2 PFAM cytochrome bd ubiquinol oxidase subunit II K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009018 342.0
SYD3_k127_4480419_3 PFAM PEBP family protein K06910 - - 0.00000000000000000000000000000000000000000000001082 188.0
SYD3_k127_4480419_4 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000003731 175.0
SYD3_k127_4480419_5 YGGT family K02221 - - 0.00000000000000000000000000000005607 133.0
SYD3_k127_4480419_6 Belongs to the UPF0235 family K09131 - - 0.000000000000000000003314 96.0
SYD3_k127_4480419_7 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.0000000009356 60.0
SYD3_k127_4480419_8 Membrane - - - 0.00001101 56.0
SYD3_k127_4494007_0 Belongs to the ClpA ClpB family K03696 - - 0.0 1041.0
SYD3_k127_4494007_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 422.0
SYD3_k127_4494007_2 PFAM RNA binding S1 domain protein K02945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 357.0
SYD3_k127_4494007_3 SMART Nucleotide binding protein, PINc - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003668 289.0
SYD3_k127_4494007_4 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000002323 253.0
SYD3_k127_4494007_5 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000002832 198.0
SYD3_k127_4494007_6 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000004399 141.0
SYD3_k127_4494007_9 Transglycosylase SLT domain K08307 - - 0.000005336 58.0
SYD3_k127_4498251_0 ATP dependent DNA ligase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 498.0
SYD3_k127_4498251_1 ATPases associated with a variety of cellular activities K16786,K16787 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009603 481.0
SYD3_k127_4498251_2 DEAD-like helicases superfamily K03724,K06877 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008064 393.0
SYD3_k127_4498251_3 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005761 394.0
SYD3_k127_4498251_4 transmembrane transporter activity K16785,K16786,K16787 - - 0.000000000000000000000000000000000000000000000000000000000000000001078 237.0
SYD3_k127_4498251_5 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000000000000000000000000000000000000000000000000000000002036 233.0
SYD3_k127_4498251_6 ECF-type riboflavin transporter, S component K16924 - - 0.00000000000000000000000000000004699 134.0
SYD3_k127_4526845_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11747 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 500.0
SYD3_k127_4526845_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007563 434.0
SYD3_k127_4526845_2 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000009068 218.0
SYD3_k127_4526845_3 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000002192 194.0
SYD3_k127_4526845_4 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000001755 184.0
SYD3_k127_4526845_5 Transglycosylase SLT domain - - - 0.00000000000000000000000000000000000000001238 161.0
SYD3_k127_4531978_0 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000002022 233.0
SYD3_k127_4531978_1 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000003156 121.0
SYD3_k127_4531978_2 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000002302 76.0
SYD3_k127_4554493_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1588.0
SYD3_k127_4554493_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1121.0
SYD3_k127_4554493_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0030312,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 4.99e-316 983.0
SYD3_k127_4554493_3 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000000000000000000000000000000000000000000002052 225.0
SYD3_k127_4554493_4 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000007789 203.0
SYD3_k127_4554493_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016020,GO:0016043,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 - 0.0000000000000000000000000000000000000000000001618 173.0
SYD3_k127_4568770_0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000001339 172.0
SYD3_k127_4568770_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000006335 117.0
SYD3_k127_4568770_2 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000003189 58.0
SYD3_k127_4575546_0 Cys/Met metabolism PLP-dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 464.0
SYD3_k127_4575546_1 - - - - 0.000006537 52.0
SYD3_k127_4610843_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 401.0
SYD3_k127_4610843_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008381 400.0
SYD3_k127_4610843_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 368.0
SYD3_k127_4610843_3 Short-chain dehydrogenase reductase sdr - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 309.0
SYD3_k127_4610843_4 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000004227 220.0
SYD3_k127_4610843_5 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000006037 186.0
SYD3_k127_4610843_6 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000165 160.0
SYD3_k127_4610843_7 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000003024 143.0
SYD3_k127_4610843_8 PFAM pyridoxamine 5'-phosphate oxidase-related - - - 0.00000000000000000001579 98.0
SYD3_k127_4610843_9 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.000000000001045 68.0
SYD3_k127_4612568_0 Sodium/hydrogen exchanger family K03455 - - 1.284e-238 751.0
SYD3_k127_4623034_0 Glycosyltransferase like family 2 K12992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 359.0
SYD3_k127_4623034_1 Cytidylyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007075 312.0
SYD3_k127_4623034_10 Glycosyl transferase 4-like - - - 0.000000000000000000000000000000693 138.0
SYD3_k127_4623034_11 glutamine synthetase K01915 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0044464,GO:0050001,GO:0071944 6.3.1.2 0.000000000000000000000000003035 112.0
SYD3_k127_4623034_12 polysaccharide biosynthetic process - - - 0.000000000000000004098 98.0
SYD3_k127_4623034_13 polysaccharide biosynthetic process - - - 0.00000000000000001583 96.0
SYD3_k127_4623034_14 transferase activity, transferring glycosyl groups - - - 0.000000000000000156 91.0
SYD3_k127_4623034_15 Glycosyl transferases group 1 - - - 0.00000004177 65.0
SYD3_k127_4623034_16 O-Antigen ligase K02847 - - 0.0008845 52.0
SYD3_k127_4623034_2 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003609 325.0
SYD3_k127_4623034_3 Protein of unknown function DUF115 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004074 300.0
SYD3_k127_4623034_4 Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000005074 233.0
SYD3_k127_4623034_5 Putative cyclase K07130 - 3.5.1.9 0.00000000000000000000000000000000000000000000000000000000000007304 223.0
SYD3_k127_4623034_6 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000009081 206.0
SYD3_k127_4623034_7 COGs COG2148 Sugar transferase involved in lipopolysaccharide synthesis - - - 0.00000000000000000000000000000000000000000000000005594 186.0
SYD3_k127_4623034_8 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000007504 160.0
SYD3_k127_4623034_9 Methyltransferase domain - - - 0.000000000000000000000000000000000008085 152.0
SYD3_k127_4628265_0 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 3.246e-241 765.0
SYD3_k127_4628265_1 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007341 266.0
SYD3_k127_4628265_2 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007415 259.0
SYD3_k127_4628265_3 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000003917 215.0
SYD3_k127_4628265_4 PFAM cytochrome c biogenesis protein, transmembrane region - - - 0.00000000000000000000000000003597 132.0
SYD3_k127_4628265_5 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000831 90.0
SYD3_k127_4628265_6 nitrous-oxide reductase activity - - - 0.000000000000000002184 91.0
SYD3_k127_4628265_7 membrane protein (DUF2078) K08982 - - 0.000001224 58.0
SYD3_k127_4695599_0 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000005376 203.0
SYD3_k127_4695599_1 Belongs to the CinA family K03742 - 3.5.1.42 0.0000000000000000000000000000000000007342 157.0
SYD3_k127_47295_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 3.6.3.14 2.899e-224 704.0
SYD3_k127_47295_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008437 542.0
SYD3_k127_47295_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001418 286.0
SYD3_k127_47295_3 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000000000000000000000000000002246 138.0
SYD3_k127_47295_4 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000005047 103.0
SYD3_k127_4787712_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 351.0
SYD3_k127_4792809_0 type II secretion system protein E K02283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 485.0
SYD3_k127_4792809_1 Type II secretion system K12510 - - 0.00000000000000000000000000000000000000000000000000000004514 207.0
SYD3_k127_4792809_2 PFAM type II secretion system K12511 - - 0.0000000000000000000000000000000000000000007324 168.0
SYD3_k127_483944_0 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065,K13252 - 2.1.3.3,2.1.3.6,2.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 334.0
SYD3_k127_483944_1 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 304.0
SYD3_k127_483944_10 cheY-homologous receiver domain - - - 0.0001242 52.0
SYD3_k127_483944_2 Domain of unknown function (DUF1730) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000177 231.0
SYD3_k127_483944_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000008931 205.0
SYD3_k127_483944_4 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000007543 176.0
SYD3_k127_483944_5 - - - - 0.000000000000000000000000000000000000000000006775 166.0
SYD3_k127_483944_6 malic protein domain protein K00027 - 1.1.1.38 0.0000000000000000000000000000000000000009368 152.0
SYD3_k127_483944_8 cell envelope-related transcriptional attenuator - - - 0.00000000000001167 86.0
SYD3_k127_4880969_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1125.0
SYD3_k127_4880969_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.437e-205 656.0
SYD3_k127_4880969_10 flavin adenine dinucleotide binding K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006215 310.0
SYD3_k127_4880969_11 Metallopeptidase family M24 K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002762 289.0
SYD3_k127_4880969_12 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008411 267.0
SYD3_k127_4880969_13 Ribosomal protein S3, C-terminal domain K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001382 268.0
SYD3_k127_4880969_14 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002911 258.0
SYD3_k127_4880969_15 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000008418 261.0
SYD3_k127_4880969_16 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000351 248.0
SYD3_k127_4880969_17 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000000000001723 228.0
SYD3_k127_4880969_18 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000000009161 228.0
SYD3_k127_4880969_19 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000006167 224.0
SYD3_k127_4880969_2 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003372 569.0
SYD3_k127_4880969_20 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000001444 239.0
SYD3_k127_4880969_21 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000000005628 215.0
SYD3_k127_4880969_22 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000002376 205.0
SYD3_k127_4880969_23 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000003638 213.0
SYD3_k127_4880969_24 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 GO:0003674,GO:0003824,GO:0004016,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0009975,GO:0016020,GO:0016021,GO:0016829,GO:0016849,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 2.7.7.85 0.000000000000000000000000000000000000000000000000000000002843 212.0
SYD3_k127_4880969_25 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000000000001099 200.0
SYD3_k127_4880969_26 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000000000000002373 189.0
SYD3_k127_4880969_27 Forms part of the polypeptide exit tunnel K02926 - - 0.00000000000000000000000000000000000000000000000000009434 194.0
SYD3_k127_4880969_28 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000003799 198.0
SYD3_k127_4880969_29 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000000000000000002432 184.0
SYD3_k127_4880969_3 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005149 430.0
SYD3_k127_4880969_30 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000000000000001864 172.0
SYD3_k127_4880969_31 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000001911 166.0
SYD3_k127_4880969_32 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000003322 185.0
SYD3_k127_4880969_33 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000003025 172.0
SYD3_k127_4880969_34 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.0000000000000000000000000000000000000000003678 158.0
SYD3_k127_4880969_35 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000005032 156.0
SYD3_k127_4880969_36 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000000000000000000000009401 154.0
SYD3_k127_4880969_37 endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000001052 154.0
SYD3_k127_4880969_38 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000587 145.0
SYD3_k127_4880969_39 MutL protein K00854 - 2.7.1.17 0.00000000000000000000000000000004239 145.0
SYD3_k127_4880969_4 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 431.0
SYD3_k127_4880969_40 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000000000000815 135.0
SYD3_k127_4880969_41 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000005055 122.0
SYD3_k127_4880969_42 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0008150,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000001462 130.0
SYD3_k127_4880969_43 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000005268 137.0
SYD3_k127_4880969_44 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000001147 121.0
SYD3_k127_4880969_45 Ribosomal protein L17 K02879 - - 0.00000000000000000000000000005186 121.0
SYD3_k127_4880969_46 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000001698 117.0
SYD3_k127_4880969_47 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000001242 111.0
SYD3_k127_4880969_48 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000003881 99.0
SYD3_k127_4880969_49 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000009581 113.0
SYD3_k127_4880969_5 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 415.0
SYD3_k127_4880969_50 - - - - 0.00000000000000000001201 104.0
SYD3_k127_4880969_51 PFAM Peptidase M22, glycoprotease K14742 - - 0.000000000000000002301 99.0
SYD3_k127_4880969_52 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000000000000005277 92.0
SYD3_k127_4880969_53 YbbR-like protein - - - 0.0000000000000001349 92.0
SYD3_k127_4880969_54 - - - - 0.000000000000367 78.0
SYD3_k127_4880969_55 Ribosomal protein L30 K02907 - - 0.0000000008135 66.0
SYD3_k127_4880969_56 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000001465 64.0
SYD3_k127_4880969_57 structural constituent of ribosome K02904 - - 0.00000001093 59.0
SYD3_k127_4880969_58 Macro domain protein - - - 0.000000156 60.0
SYD3_k127_4880969_59 - - - - 0.00008325 55.0
SYD3_k127_4880969_6 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 388.0
SYD3_k127_4880969_60 pseudouridine synthase activity K06178,K06181,K06183 - 5.4.99.19,5.4.99.20,5.4.99.22 0.00009621 53.0
SYD3_k127_4880969_7 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 402.0
SYD3_k127_4880969_8 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 334.0
SYD3_k127_4880969_9 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:1901564 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 337.0
SYD3_k127_4890356_0 Endoribonuclease that initiates mRNA decay K18682 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 560.0
SYD3_k127_4890356_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0000150,GO:0000166,GO:0000287,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009432,GO:0009605,GO:0009628,GO:0009650,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030145,GO:0030554,GO:0031668,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042148,GO:0042221,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046677,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 475.0
SYD3_k127_4890356_10 - - - - 0.0000000000000000000000000000000237 138.0
SYD3_k127_4890356_11 N-acyl-D-aspartate D-glutamate deacylase K06015 - 3.5.1.81 0.000000000000000000000001583 106.0
SYD3_k127_4890356_12 Modulates RecA activity K03565 - - 0.000000000000000001961 92.0
SYD3_k127_4890356_13 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.000000000000000232 90.0
SYD3_k127_4890356_14 Protein of unknown function (DUF2905) - - - 0.000000000000003003 78.0
SYD3_k127_4890356_15 Sigma-70, region 4 - - - 0.00000000000006975 78.0
SYD3_k127_4890356_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 430.0
SYD3_k127_4890356_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008315 415.0
SYD3_k127_4890356_4 Permease family K06901 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 413.0
SYD3_k127_4890356_5 PFAM Adenosine AMP deaminase K01488,K18286 - 3.5.4.4,3.5.4.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 419.0
SYD3_k127_4890356_6 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 322.0
SYD3_k127_4890356_7 Luciferase-like monooxygenase K04091 - 1.14.14.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000136 276.0
SYD3_k127_4890356_8 TIGRFAM metallophosphoesterase, MG_246 BB_0505 family K09769 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001799 261.0
SYD3_k127_4890356_9 NlpC/P60 family - - - 0.00000000000000000000000000000000000003715 161.0
SYD3_k127_501441_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 3.457e-206 664.0
SYD3_k127_501441_1 Magnesium chelatase, subunit ChlI K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009749 412.0
SYD3_k127_501441_10 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.000000000000000000000000000000182 136.0
SYD3_k127_501441_11 protein with SCP PR1 domains - - - 0.00000000001671 77.0
SYD3_k127_501441_12 Methicillin resistance protein K05363,K11693 - 2.3.2.10,2.3.2.16 0.00000000491 64.0
SYD3_k127_501441_2 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009407 412.0
SYD3_k127_501441_3 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 341.0
SYD3_k127_501441_4 PFAM band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005001 318.0
SYD3_k127_501441_5 PFAM response regulator receiver K02282 - - 0.00000000000000000000000000000000000000000000000000000000000000001647 242.0
SYD3_k127_501441_6 tyrosine recombinase XerC K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000002598 223.0
SYD3_k127_501441_7 Rossmann fold nucleotide-binding protein involved in DNA uptake K04096 - - 0.00000000000000000000000000000000000000000000000000375 198.0
SYD3_k127_501441_8 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000001494 174.0
SYD3_k127_501441_9 Methicillin resistance protein K05363,K18354 - 2.3.2.10 0.000000000000000000000000000000003876 145.0
SYD3_k127_5058926_0 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000003371 245.0
SYD3_k127_515958_0 Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000004599 199.0
SYD3_k127_5200710_0 AcrB/AcrD/AcrF family K07787 - - 2.648e-237 738.0
SYD3_k127_5205887_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000002281 213.0
SYD3_k127_5205887_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000005705 94.0
SYD3_k127_5262584_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005699 527.0
SYD3_k127_5262584_1 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 380.0
SYD3_k127_5262584_2 Belongs to the long-chain O-acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007574 301.0
SYD3_k127_5262584_3 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000005645 207.0
SYD3_k127_5262584_4 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000005366 214.0
SYD3_k127_5262584_5 His Kinase A (phosphoacceptor) domain K14982 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.13.3 0.000000000000000000000000000000000000000000000003233 191.0
SYD3_k127_5262584_6 Ferric reductase like transmembrane component - - - 0.00000000000000000000000000000000000000000187 171.0
SYD3_k127_5262584_7 Adenylate cyclase regulatory domain - - - 0.0000000000000000002154 99.0
SYD3_k127_5262584_8 Heavy metal translocating P-type atpase K01533,K17686 - 3.6.3.4,3.6.3.54 0.0000001014 65.0
SYD3_k127_5277917_0 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032991,GO:0032993,GO:0033554,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 329.0
SYD3_k127_5277917_1 Belongs to the CinA family K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001767 266.0
SYD3_k127_5277917_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0071496 - 0.00000000000000000000000000000000000000000000000000000000001134 207.0
SYD3_k127_5277917_3 Transcriptional regulator K07727 - - 0.000000000000000000000000008291 110.0
SYD3_k127_5284058_0 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 297.0
SYD3_k127_5284058_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K18302 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005954 257.0
SYD3_k127_5284058_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000000000000000000000000000000000000000000000001181 208.0
SYD3_k127_5300618_0 Uncharacterised conserved protein (DUF2156) K07027,K14205 - 2.3.2.3 1.157e-233 754.0
SYD3_k127_5300618_1 ATPase (P-type) K01535 - 3.6.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 486.0
SYD3_k127_5388680_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006041 274.0
SYD3_k127_5449076_0 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 445.0
SYD3_k127_5506627_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000157 161.0
SYD3_k127_5506627_1 membrane - - - 0.0000000000000000000000000000000000000004488 159.0
SYD3_k127_5506627_2 - - - - 0.0000000000007908 73.0
SYD3_k127_5520243_0 DEAD/H associated K03724 - - 0.0 1180.0
SYD3_k127_5520243_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 320.0
SYD3_k127_5520243_2 Vitamin k epoxide reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000096 318.0
SYD3_k127_5520243_3 Transcriptional regulatory protein, C terminal K07667 - - 0.00000000000000000000000000000000000000000000000000000000000000000004218 239.0
SYD3_k127_5520243_4 IclR helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000005492 171.0
SYD3_k127_5520243_5 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000001957 160.0
SYD3_k127_5520243_6 conserved protein (DUF2249) - - - 0.00000000000000000000000000000000002912 147.0
SYD3_k127_5520243_7 metal-sulfur cluster biosynthetic enzyme - - - 0.000000000000000000000000000007062 126.0
SYD3_k127_5520243_8 Uncharacterized conserved protein (DUF2249) - - - 0.00000000000000000000000000008349 130.0
SYD3_k127_5520243_9 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000003604 61.0
SYD3_k127_5538263_0 MFS transporter K11381 - 1.2.4.4 1.018e-220 728.0
SYD3_k127_5538263_1 Cytochrome C and Quinol oxidase polypeptide I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 580.0
SYD3_k127_5538263_10 Activator of Hsp90 ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007215 246.0
SYD3_k127_5538263_11 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005464 241.0
SYD3_k127_5538263_12 3-methyladenine DNA glycosylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000004932 260.0
SYD3_k127_5538263_13 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000006443 222.0
SYD3_k127_5538263_14 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000001352 218.0
SYD3_k127_5538263_15 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000009305 197.0
SYD3_k127_5538263_16 Cytochrome c oxidase caa3-type, assembly factor CtaG-related K02351,K07245 - - 0.00000000000000000000000000000000000000000000000003913 193.0
SYD3_k127_5538263_17 RHS Repeat - GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0004549,GO:0006139,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016078,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:0140101,GO:1901360,GO:1901361,GO:1901575 - 0.000000000000000000000000000000000000000000000000164 205.0
SYD3_k127_5538263_18 glycosyl - - - 0.00000000000000000000000000000000000000000000001202 190.0
SYD3_k127_5538263_19 LysM domain - - - 0.00000000000000000000000000000000000000000000004426 179.0
SYD3_k127_5538263_2 phosphorelay signal transduction system K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 517.0
SYD3_k127_5538263_20 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000126 156.0
SYD3_k127_5538263_21 Heme copper-type cytochrome quinol oxidase subunit 3 K02276 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.9.3.1 0.00000000000000000000000000000000000000005152 158.0
SYD3_k127_5538263_22 Sigma-70, region 4 type 2 - - - 0.0000000000000000000000000000000000000000595 162.0
SYD3_k127_5538263_23 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.00000000000000000000000000000000006739 143.0
SYD3_k127_5538263_24 - - - - 0.000000000000000000000000000000005707 138.0
SYD3_k127_5538263_25 Histidine kinase - - - 0.0000000000000000000000000000002417 140.0
SYD3_k127_5538263_26 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000003519 132.0
SYD3_k127_5538263_27 Belongs to the class-I aminoacyl-tRNA synthetase family K01883,K15526 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16,6.3.1.13 0.0000000000000000000000000000003796 134.0
SYD3_k127_5538263_28 PFAM Activator of Hsp90 ATPase 1 family protein - - - 0.00000000000000000000000000001437 125.0
SYD3_k127_5538263_29 helix_turn_helix, Arsenical Resistance Operon Repressor - GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043254,GO:0044087,GO:0044212,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0090034,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000001505 121.0
SYD3_k127_5538263_3 PFAM Acetyl-CoA hydrolase transferase K01067 - 3.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008024 493.0
SYD3_k127_5538263_30 Rhomboid family K19225 - 3.4.21.105 0.00000000000000000000000000001603 130.0
SYD3_k127_5538263_31 Bacterial Ig-like domain (group 3) - - - 0.00000000000000000000000000009482 137.0
SYD3_k127_5538263_32 EamA-like transporter family - - - 0.000000000000000000000001748 113.0
SYD3_k127_5538263_33 Universal stress protein family - - - 0.00000000000000000000004162 110.0
SYD3_k127_5538263_34 Ferredoxin - - - 0.0000000000000000000000836 104.0
SYD3_k127_5538263_35 AraC-like ligand binding domain - - - 0.0000000000000000000004438 109.0
SYD3_k127_5538263_36 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000001453 106.0
SYD3_k127_5538263_37 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000181 108.0
SYD3_k127_5538263_38 Sulfocyanin (SoxE) domain - - - 0.000000000000002342 82.0
SYD3_k127_5538263_39 Protein of unknown function (DUF3352) - - - 0.000000000000578 82.0
SYD3_k127_5538263_4 Belongs to the ABC transporter superfamily K02052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 462.0
SYD3_k127_5538263_40 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 0.000000000153 69.0
SYD3_k127_5538263_41 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 0.000000003028 69.0
SYD3_k127_5538263_42 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 0.000000005477 67.0
SYD3_k127_5538263_43 - - - - 0.00000002824 62.0
SYD3_k127_5538263_44 - - - - 0.0000004765 59.0
SYD3_k127_5538263_45 Helix-turn-helix domain - - - 0.000001616 60.0
SYD3_k127_5538263_46 - - - - 0.00001269 52.0
SYD3_k127_5538263_47 von Willebrand factor (vWF) type A domain - - - 0.0002077 53.0
SYD3_k127_5538263_5 Required for the activity of the bacterial periplasmic transport system of putrescine K02055 GO:0005575,GO:0005623,GO:0006810,GO:0008150,GO:0008152,GO:0009058,GO:0009290,GO:0009292,GO:0009294,GO:0009987,GO:0015931,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042618,GO:0042619,GO:0044464,GO:0044764,GO:0050657,GO:0051027,GO:0051179,GO:0051234,GO:0051704,GO:0071702,GO:0071704,GO:0071705,GO:0098657,GO:1901440,GO:1901441,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009406 455.0
SYD3_k127_5538263_6 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004763 359.0
SYD3_k127_5538263_7 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005071 351.0
SYD3_k127_5538263_8 PFAM binding-protein-dependent transport systems inner membrane component K02053 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 317.0
SYD3_k127_5538263_9 synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001333 268.0
SYD3_k127_5547490_0 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000000000000000000000000000000000000000003285 218.0
SYD3_k127_5547490_1 Chemotaxis protein CheA K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000003501 186.0
SYD3_k127_5552014_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 486.0
SYD3_k127_5552014_1 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009262 308.0
SYD3_k127_5552014_2 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008904 276.0
SYD3_k127_5552014_3 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.0000000000000000000000000000000000000000000004335 172.0
SYD3_k127_5552014_4 Potassium ABC transporter permease K01992 - - 0.00000000000000000000000000000000000001211 154.0
SYD3_k127_5552014_5 ABC-2 family transporter protein K01992 - - 0.000001771 59.0
SYD3_k127_5561284_0 PFAM Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000004137 203.0
SYD3_k127_5561284_1 CO dehydrogenase flavoprotein C-terminal domain K13479 - 1.17.1.4 0.0000000000000000000000000000000000000000000001126 179.0
SYD3_k127_5570390_0 inorganic phosphate transmembrane transporter activity K02037,K02038 GO:0008150,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044403,GO:0044419,GO:0051704 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 317.0
SYD3_k127_5570390_1 Phosphate transport system permease protein PstA K02038 - - 0.000000000000000000000000000000000000008398 153.0
SYD3_k127_5581559_0 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.00000000000000000000000000000000000002069 147.0
SYD3_k127_5581559_1 - - - - 0.000000000000000000000000000005842 127.0
SYD3_k127_5602203_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000189 263.0
SYD3_k127_5617897_0 helicase superfamily c-terminal domain K06877 - - 1.21e-274 864.0
SYD3_k127_5617897_1 UvrD/REP helicase N-terminal domain K03657,K07465 - 3.6.4.12 3.477e-260 835.0
SYD3_k127_5617897_10 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000004918 181.0
SYD3_k127_5617897_11 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000005195 165.0
SYD3_k127_5617897_12 Exonuclease K07502 - - 0.00000000000000000000000000000000000000713 160.0
SYD3_k127_5617897_13 Protein of unknown function (DUF4446) - - - 0.000000000000000000000000009454 117.0
SYD3_k127_5617897_14 Methyltransferase type 12 - - - 0.0000000000000000000233 104.0
SYD3_k127_5617897_15 protease K09607 - - 0.00000000000000006001 96.0
SYD3_k127_5617897_16 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852,K19517 - 2.7.1.15,2.7.1.64 0.00000000009922 72.0
SYD3_k127_5617897_17 Elongation factor SelB, winged helix K03833 - - 0.000000001701 70.0
SYD3_k127_5617897_18 Bacterial transcriptional activator domain K03556 - - 0.000000001828 71.0
SYD3_k127_5617897_19 Septum formation initiator - - - 0.00004539 53.0
SYD3_k127_5617897_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 347.0
SYD3_k127_5617897_3 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 323.0
SYD3_k127_5617897_4 M6 family metalloprotease domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005167 331.0
SYD3_k127_5617897_5 Zincin-like metallopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000176 295.0
SYD3_k127_5617897_6 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003035 277.0
SYD3_k127_5617897_7 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002111 246.0
SYD3_k127_5617897_8 Provides the (R)-glutamate required for cell wall biosynthesis K01776,K02428 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008881,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0034645,GO:0036361,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0047661,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 3.6.1.66,5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000003698 229.0
SYD3_k127_5617897_9 VIT family - - - 0.000000000000000000000000000000000000000000000000008786 191.0
SYD3_k127_5666884_0 HELICc2 K03722 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 444.0
SYD3_k127_5680748_0 ABC transporter K06147 - - 3.286e-240 758.0
SYD3_k127_5680748_1 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 2.613e-229 721.0
SYD3_k127_5680748_10 Aldehyde dehydrogenase K00128 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 366.0
SYD3_k127_5680748_11 MgtE intracellular N domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 358.0
SYD3_k127_5680748_12 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004602 344.0
SYD3_k127_5680748_13 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 345.0
SYD3_k127_5680748_14 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism K01488 GO:0003674,GO:0003824,GO:0004000,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006144,GO:0006152,GO:0006154,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009113,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009156,GO:0009161,GO:0009163,GO:0009164,GO:0009165,GO:0009167,GO:0009168,GO:0009987,GO:0015949,GO:0015950,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0019637,GO:0032261,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042278,GO:0042440,GO:0042451,GO:0042454,GO:0042455,GO:0042737,GO:0043094,GO:0043096,GO:0043101,GO:0043103,GO:0043173,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046085,GO:0046100,GO:0046101,GO:0046102,GO:0046103,GO:0046112,GO:0046128,GO:0046129,GO:0046130,GO:0046148,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0072523,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659 3.5.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004872 334.0
SYD3_k127_5680748_15 Carboxyl transferase domain K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005901 322.0
SYD3_k127_5680748_16 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006639 306.0
SYD3_k127_5680748_17 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006119 297.0
SYD3_k127_5680748_18 Mannose-6-phosphate isomerase K00971 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 292.0
SYD3_k127_5680748_19 reductase K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004075 280.0
SYD3_k127_5680748_2 Protein of unknown function, DUF255 K06888 - - 7.38e-197 634.0
SYD3_k127_5680748_20 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000006082 260.0
SYD3_k127_5680748_21 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003023 245.0
SYD3_k127_5680748_22 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000004091 244.0
SYD3_k127_5680748_23 glutamine-fructose-6-phosphate transaminase (isomerizing) activity K00820,K15916 - 2.6.1.16,5.3.1.8,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000629 226.0
SYD3_k127_5680748_24 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000000000001387 218.0
SYD3_k127_5680748_25 PFAM ABC transporter related K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000007274 222.0
SYD3_k127_5680748_26 FabA-like domain K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000000001225 187.0
SYD3_k127_5680748_27 Uncharacterised protein family UPF0047 - GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000002133 186.0
SYD3_k127_5680748_28 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.000000000000000000000000000000000000000000000000006204 191.0
SYD3_k127_5680748_29 PFAM periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000002957 188.0
SYD3_k127_5680748_3 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 549.0
SYD3_k127_5680748_30 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000000000000003771 185.0
SYD3_k127_5680748_31 TIGRFAM phosphodiesterase, MJ0936 - - - 0.00000000000000000000000000000000000000000000009403 177.0
SYD3_k127_5680748_32 PFAM TPR repeat-containing protein - - - 0.0000000000000000000000000000000000000000000005256 178.0
SYD3_k127_5680748_33 Nickel-containing superoxide dismutase K00518 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.15.1.1 0.000000000000000000000000000000000000001424 153.0
SYD3_k127_5680748_34 NUDIX domain - - - 0.00000000000000000000000000000000000001802 156.0
SYD3_k127_5680748_35 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000000000000000002452 144.0
SYD3_k127_5680748_36 permease - GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.000000000000000000000000000003315 137.0
SYD3_k127_5680748_37 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000008284 128.0
SYD3_k127_5680748_38 Sigma-70, region 4 - - - 0.00000000000000000000000000001756 132.0
SYD3_k127_5680748_39 Acyl-ACP thioesterase K07107 - - 0.000000000000000000000000001641 117.0
SYD3_k127_5680748_4 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 481.0
SYD3_k127_5680748_40 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000003386 107.0
SYD3_k127_5680748_41 Metal-sensitive transcriptional repressor K21600 - - 0.0000000000000000000003366 100.0
SYD3_k127_5680748_42 GlcNAc-PI de-N-acetylase K22135 - - 0.000000000000000000000902 106.0
SYD3_k127_5680748_43 PFAM zinc finger, SWIM domain protein - - - 0.00000000000000000001914 103.0
SYD3_k127_5680748_44 Conserved protein containing a Zn-ribbon-like motif possibly RNA-binding - - - 0.00000000000000001462 95.0
SYD3_k127_5680748_45 Transcriptional - - - 0.00000000000000005535 93.0
SYD3_k127_5680748_46 Domain of unknown function (DUF374) K09778 - - 0.0000000000002163 83.0
SYD3_k127_5680748_47 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.0000000000007469 76.0
SYD3_k127_5680748_48 DNA-templated transcription, initiation K03088 - - 0.000000000003508 74.0
SYD3_k127_5680748_49 peptidase - - - 0.000000000007137 76.0
SYD3_k127_5680748_5 DNA polymerase X family K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006843 476.0
SYD3_k127_5680748_50 Peptidase S24-like - - - 0.000000000008513 73.0
SYD3_k127_5680748_51 N-4 methylation of cytosine K00590 - 2.1.1.113 0.0000000000283 78.0
SYD3_k127_5680748_52 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000003566 55.0
SYD3_k127_5680748_53 zinc-ribbon domain - - - 0.0007364 48.0
SYD3_k127_5680748_6 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004125 463.0
SYD3_k127_5680748_7 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01835,K01840 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009342 451.0
SYD3_k127_5680748_8 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 420.0
SYD3_k127_5680748_9 Natural resistance-associated macrophage protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 400.0
SYD3_k127_5705479_0 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005372 332.0
SYD3_k127_5705479_1 succinate dehydrogenase or fumarate reductase, flavoprotein K00239 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000174 199.0
SYD3_k127_5705479_2 PFAM ribonuclease H K03469,K06864 - 3.1.26.4 0.0000000000000000000000000000022 130.0
SYD3_k127_5705479_3 - - - - 0.00006198 49.0
SYD3_k127_5705479_4 PFAM Sporulation and spore germination - - - 0.0002712 53.0
SYD3_k127_5707646_0 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K03520 - 1.2.5.3 2.184e-287 907.0
SYD3_k127_5707646_1 Belongs to the cysteine synthase cystathionine beta- synthase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 625.0
SYD3_k127_5707646_2 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006102 484.0
SYD3_k127_5707646_3 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 468.0
SYD3_k127_5707646_4 Pyridoxal-phosphate dependent enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004677 451.0
SYD3_k127_5707646_5 Dihydroorotate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005443 389.0
SYD3_k127_5707646_6 PspA/IM30 family K03969 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002696 252.0
SYD3_k127_5707646_7 TPM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000007888 266.0
SYD3_k127_5712004_0 PFAM binding-protein-dependent transport systems inner membrane component K02025,K17242 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 308.0
SYD3_k127_5712004_1 Binding-protein-dependent transport system inner membrane component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001981 255.0
SYD3_k127_5715433_0 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 3.125e-229 719.0
SYD3_k127_5716360_0 capsular polysaccharide biosynthesis protein K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 409.0
SYD3_k127_5716360_1 Polysaccharide biosynthesis/export protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005786 319.0
SYD3_k127_5716360_2 G-rich domain on putative tyrosine kinase - - - 0.000000000000000000000000000000009568 130.0
SYD3_k127_5716360_3 Belongs to the mannose-6-phosphate isomerase type 2 family K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000432 119.0
SYD3_k127_5721799_0 - - - - 0.00000000000000000000001077 108.0
SYD3_k127_5721799_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K13810 - 2.2.1.2,5.3.1.9 0.000002702 50.0
SYD3_k127_5721799_2 Glycosyltransferase like family 2 - - - 0.000297 51.0
SYD3_k127_5741517_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 579.0
SYD3_k127_5741517_1 DNA polymerase LigD polymerase domain K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004432 460.0
SYD3_k127_5741517_2 metal-dependent phosphohydrolase, HD sub domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009954 245.0
SYD3_k127_5741517_3 light absorption K07255,K21700 - - 0.000000000000000000000008353 101.0
SYD3_k127_5741517_4 Toxic component of a toxin-antitoxin (TA) module. An RNase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000004137 98.0
SYD3_k127_5743838_0 Cystathionine beta-synthase K01697 GO:0003674,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008144,GO:0016020,GO:0019842,GO:0030170,GO:0030312,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0071944,GO:0097159,GO:1901363 4.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 368.0
SYD3_k127_5743838_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000003806 202.0
SYD3_k127_5743838_2 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000002964 147.0
SYD3_k127_5766088_0 Protein of unknown function (DUF1385) K09153 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005355 257.0
SYD3_k127_5766088_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000008317 76.0
SYD3_k127_5773481_0 Sugar (and other) transporter K03446 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 376.0
SYD3_k127_5773481_1 Biotin-lipoyl like K03543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002414 288.0
SYD3_k127_5773481_2 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000145 186.0
SYD3_k127_5804362_0 Inorganic ion transport and metabolism K03319 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007844 506.0
SYD3_k127_5804362_1 Fumarase C C-terminus K01744 - 4.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519 315.0
SYD3_k127_5804362_2 Belongs to the asparaginase 1 family K01424 - 3.5.1.1 0.00000000000000000000000000000000000000000003126 172.0
SYD3_k127_5840590_0 Protein export membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 474.0
SYD3_k127_5846887_0 decarboxylase K01593 - 4.1.1.105,4.1.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006782 487.0
SYD3_k127_5846887_1 TrkA-N domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004116 475.0
SYD3_k127_5853346_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 449.0
SYD3_k127_5853346_1 tRNA synthetases class I (K) K04566 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 424.0
SYD3_k127_5853346_10 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000005414 95.0
SYD3_k127_5853346_11 Matrixin - - - 0.00000000001915 74.0
SYD3_k127_5853346_12 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000001587 55.0
SYD3_k127_5853346_14 - - - - 0.0001318 46.0
SYD3_k127_5853346_15 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.0006113 50.0
SYD3_k127_5853346_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000035 301.0
SYD3_k127_5853346_3 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002067 263.0
SYD3_k127_5853346_4 PFAM glycosyl transferase family 39 K00728 - 2.4.1.109 0.000000000000000000000000000000000000000000000000000000000000002167 237.0
SYD3_k127_5853346_5 Thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000004025 215.0
SYD3_k127_5853346_6 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000005352 149.0
SYD3_k127_5853346_7 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000006746 124.0
SYD3_k127_5853346_8 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000001209 117.0
SYD3_k127_5853346_9 RDD family - - - 0.0000000000000000008591 93.0
SYD3_k127_5855593_0 peptidase activity, acting on L-amino acid peptides K13735,K20276,K21449 - - 1.374e-308 987.0
SYD3_k127_5855593_1 TIGRFAM phenylacetate-CoA oxygenase, PaaG subunit K02609 - 1.14.13.149 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 449.0
SYD3_k127_5855593_2 Sugar-specific transcriptional regulator TrmB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007343 277.0
SYD3_k127_5855593_3 Uncharacterized protein conserved in bacteria (DUF2255) - - - 0.00005615 53.0
SYD3_k127_5861174_0 aromatic amino acid beta-eliminating lyase threonine aldolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 428.0
SYD3_k127_5861174_1 UDP binding domain K02472,K13015 - 1.1.1.136,1.1.1.336 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 425.0
SYD3_k127_5861174_2 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791,K13019 - 5.1.3.14,5.1.3.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 391.0
SYD3_k127_5861174_3 PFAM oxidoreductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 321.0
SYD3_k127_5861174_4 TIGRFAM MazG family protein K02499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005226 264.0
SYD3_k127_5861174_5 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000001043 259.0
SYD3_k127_5861174_6 PFAM transferase hexapeptide repeat containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000134 224.0
SYD3_k127_5861174_7 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000001556 199.0
SYD3_k127_5861174_8 Putative cell wall binding repeat 2 - - - 0.000000000000000000000000121 110.0
SYD3_k127_5861174_9 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.000000000000000000004856 108.0
SYD3_k127_5869585_0 pfam abc K02028 - 3.6.3.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008684 296.0
SYD3_k127_5869585_1 Helix-hairpin-helix motif K02337,K14162 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000005181 243.0
SYD3_k127_5869585_2 amino acid transport K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000003251 230.0
SYD3_k127_5869585_3 amino acid ABC transporter K02029,K10009 - - 0.0000000000000000000000000000000000000000000000000000000000000183 225.0
SYD3_k127_5895202_0 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000377 511.0
SYD3_k127_5895202_1 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004399 312.0
SYD3_k127_5895202_2 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000003228 194.0
SYD3_k127_5895202_3 O-methyltransferase - - - 0.000000000000000000000000003559 127.0
SYD3_k127_5895202_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000006315 94.0
SYD3_k127_5895202_5 Phosphohistidine phosphatase, SixA K08296 - - 0.000000000000003028 82.0
SYD3_k127_5895202_6 Alanine racemase K20757 - 4.3.1.27 0.00000001835 55.0
SYD3_k127_5895202_7 - - - - 0.0002845 49.0
SYD3_k127_5899525_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 2.851e-196 629.0
SYD3_k127_5899525_1 Bacterial protein of unknown function (DUF853) K06915 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 509.0
SYD3_k127_5899525_2 PFAM peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002514 472.0
SYD3_k127_5899525_3 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384,K03671 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 400.0
SYD3_k127_5899525_4 OsmC-like protein - - - 0.0000000000000000000000000000000000000000008119 162.0
SYD3_k127_5899525_5 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000003056 134.0
SYD3_k127_5899525_6 PFAM amino acid-binding ACT domain protein - - - 0.00000008388 60.0
SYD3_k127_5899525_7 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0001847 45.0
SYD3_k127_5899525_8 Histidine kinase - - - 0.0005224 49.0
SYD3_k127_5916001_0 TIGRFAM amine acid ABC transporter, permease protein, 3-TM region, His Glu Gln Arg opine family K09970 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 349.0
SYD3_k127_5916001_1 Binding-protein-dependent transport system inner membrane component K09971 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 360.0
SYD3_k127_5916001_2 PFAM ABC transporter related K09972 - - 0.0009758 51.0
SYD3_k127_5920334_0 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001814 251.0
SYD3_k127_5920334_1 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.0000000000000000000000000000001472 130.0
SYD3_k127_5923467_0 Belongs to the peptidase M50B family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 364.0
SYD3_k127_5923467_1 Putative peptidoglycan binding domain K21470 - - 0.00000000000000000000000000000000000000000000004145 182.0
SYD3_k127_5924918_0 domain protein - - - 0.000000000000003184 84.0
SYD3_k127_594603_0 - - - - 0.000000000000000000000000000000000000001319 160.0
SYD3_k127_594603_1 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.0000000000000000000000000000000000001913 151.0
SYD3_k127_5951865_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 324.0
SYD3_k127_5951865_1 Capsule synthesis protein K07282 - - 0.000123 48.0
SYD3_k127_5967415_0 TIGRFAM fructose-1,6-bisphosphatase, class II K02446 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004825 366.0
SYD3_k127_5967415_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 332.0
SYD3_k127_5967415_2 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950,K13940 - 2.7.6.3,4.1.2.25 0.0000000000000000000000000000008411 127.0
SYD3_k127_5967415_3 Diguanylate cyclase, GGDEF domain - - - 0.0000892 53.0
SYD3_k127_5989367_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 5.165e-291 938.0
SYD3_k127_5989367_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 5.278e-268 837.0
SYD3_k127_5989367_10 phosphatidate phosphatase activity - - - 0.00000000000000000000000000000000000000000000000000004286 199.0
SYD3_k127_5989367_11 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000001099 199.0
SYD3_k127_5989367_12 VanW like protein - - - 0.000000000000000000000000000000000000000001932 176.0
SYD3_k127_5989367_13 membrane - - - 0.00000000000000000000000000000000000002318 154.0
SYD3_k127_5989367_14 phosphatidate phosphatase activity - - - 0.00000000000000000000000000000000004864 146.0
SYD3_k127_5989367_15 - - - - 0.0000000000000000000000000000367 124.0
SYD3_k127_5989367_16 Double zinc ribbon - - - 0.0000000000000000000000006995 107.0
SYD3_k127_5989367_17 extracellular polysaccharide biosynthetic process K13582 - - 0.00000000000000000000007904 109.0
SYD3_k127_5989367_18 - - - - 0.000000000000000138 82.0
SYD3_k127_5989367_19 Lamin Tail Domain - - - 0.0000001767 65.0
SYD3_k127_5989367_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 609.0
SYD3_k127_5989367_20 Binds directly to 16S ribosomal RNA K02968 - - 0.0000007902 62.0
SYD3_k127_5989367_21 PKD domain - - - 0.000006382 60.0
SYD3_k127_5989367_22 - - - - 0.0001645 51.0
SYD3_k127_5989367_3 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003978 476.0
SYD3_k127_5989367_4 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 475.0
SYD3_k127_5989367_5 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006558 354.0
SYD3_k127_5989367_6 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000216 282.0
SYD3_k127_5989367_7 Belongs to the CarA family K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000001905 264.0
SYD3_k127_5989367_8 PFAM ROK family protein K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000001021 246.0
SYD3_k127_5989367_9 Phosphorylase superfamily K00757 GO:0003674,GO:0003824,GO:0004850,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006218,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009116,GO:0009119,GO:0009164,GO:0009987,GO:0016043,GO:0016740,GO:0016757,GO:0016763,GO:0019439,GO:0022607,GO:0030955,GO:0031420,GO:0033554,GO:0034214,GO:0034641,GO:0034655,GO:0034656,GO:0042454,GO:0042802,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046108,GO:0046131,GO:0046133,GO:0046135,GO:0046483,GO:0046700,GO:0046872,GO:0050896,GO:0051259,GO:0051716,GO:0055086,GO:0065003,GO:0071704,GO:0071840,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 2.4.2.3 0.000000000000000000000000000000000000000000000000000000000000000006536 234.0
SYD3_k127_6019520_0 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) - - - 0.00000000000000000000000000000000000000000000000007775 184.0
SYD3_k127_6035846_0 Amino acid permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007833 623.0
SYD3_k127_6035846_1 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008137 280.0
SYD3_k127_6035846_10 cheY-homologous receiver domain - - - 0.0001485 52.0
SYD3_k127_6035846_2 Bacterial extracellular solute-binding protein K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001041 286.0
SYD3_k127_6035846_3 PFAM Binding-protein-dependent transport system inner membrane component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000002781 245.0
SYD3_k127_6035846_4 NPCBM-associated, NEW3 domain of alpha-galactosidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000004081 248.0
SYD3_k127_6035846_5 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000249 236.0
SYD3_k127_6035846_6 PFAM Binding-protein-dependent transport system inner membrane component K02025 - - 0.000000000000000000000000000000000000000000000000000000000000001117 233.0
SYD3_k127_6035846_7 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000003091 157.0
SYD3_k127_6035846_8 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000003789 109.0
SYD3_k127_6035846_9 ABC-2 type transporter - - - 0.000000002311 61.0
SYD3_k127_6050751_0 tRNA synthetases class I (M) K01874 - 6.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001123 284.0
SYD3_k127_6050751_1 PSP1 C-terminal conserved region - - - 0.0000003616 55.0
SYD3_k127_6051147_0 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 614.0
SYD3_k127_6051147_1 M42 glutamyl aminopeptidase - - - 0.000000000000000000000000000000001014 136.0
SYD3_k127_6072204_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 370.0
SYD3_k127_6072204_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000004936 124.0
SYD3_k127_607311_0 transferase activity, transferring glycosyl groups K09118,K13693,K21349 - 2.4.1.266,2.4.1.268 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007299 387.0
SYD3_k127_607311_1 PFAM Glycosyl transferase family 2 K21349 - 2.4.1.268 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000187 282.0
SYD3_k127_6077778_0 Na+/H+ antiporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001184 254.0
SYD3_k127_6093753_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 3.766e-270 869.0
SYD3_k127_6093753_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000000006893 182.0
SYD3_k127_6093753_2 Sarcosine oxidase, beta subunit K00303 - 1.5.3.1 0.0000002113 60.0
SYD3_k127_6111302_0 Belongs to the peptidase S8 family K01342 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005576,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030193,GO:0030195,GO:0032101,GO:0032102,GO:0042730,GO:0043170,GO:0044238,GO:0048519,GO:0048583,GO:0048585,GO:0050789,GO:0050818,GO:0050819,GO:0050878,GO:0051239,GO:0051241,GO:0061041,GO:0061045,GO:0065007,GO:0065008,GO:0070011,GO:0071704,GO:0080134,GO:0140096,GO:1900046,GO:1900047,GO:1901564,GO:1903034,GO:1903035 3.4.21.62 0.000000000000000000000000000000000000000000000000723 188.0
SYD3_k127_6111302_1 KR domain - - - 0.000000000000000000001312 96.0
SYD3_k127_6138406_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000616 386.0
SYD3_k127_6138406_1 PFAM phosphate transporter K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 370.0
SYD3_k127_6138406_10 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.000000000000000000000000000000000000000008412 173.0
SYD3_k127_6138406_11 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000005328 142.0
SYD3_k127_6138406_12 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000007509 135.0
SYD3_k127_6138406_13 membrane transporter protein K07090 - - 0.00000000000000000000000001539 113.0
SYD3_k127_6138406_14 COG3209 Rhs family protein - - - 0.00000000000000000000002217 114.0
SYD3_k127_6138406_16 SnoaL-like domain - - - 0.0001822 52.0
SYD3_k127_6138406_2 PBP superfamily domain K02040 GO:0003674,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0015698,GO:0016020,GO:0016036,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042301,GO:0042594,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0071496,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003811 344.0
SYD3_k127_6138406_3 beta-galactosidase activity K01190,K01195 - 3.2.1.23,3.2.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 351.0
SYD3_k127_6138406_4 Binding-protein-dependent transport system inner membrane component K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002719 327.0
SYD3_k127_6138406_5 Binding-protein-dependent transport system inner membrane component K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007227 273.0
SYD3_k127_6138406_6 Transcriptional regulatory protein, C terminal K07658 - - 0.000000000000000000000000000000000000000000000000000000000000002592 236.0
SYD3_k127_6138406_7 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000223 225.0
SYD3_k127_6138406_8 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000000000306 203.0
SYD3_k127_6138406_9 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000005187 198.0
SYD3_k127_6321229_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 548.0
SYD3_k127_6321229_1 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 526.0
SYD3_k127_6321229_2 Proton-conducting membrane transporter K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006135 368.0
SYD3_k127_6321229_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000001746 237.0
SYD3_k127_6321229_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000252 116.0
SYD3_k127_6321229_5 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000001746 109.0
SYD3_k127_6321229_6 Peptidase family M23 K08259 - 3.4.24.75 0.00000000000000007607 81.0
SYD3_k127_6321229_7 PilZ domain - - - 0.000001176 56.0
SYD3_k127_6493363_0 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006756 259.0
SYD3_k127_6493363_1 - - - - 0.00000000000000000005072 95.0
SYD3_k127_660772_0 - - - - 0.00000000000000000000000000000000000000000000000000000000007496 216.0
SYD3_k127_660772_1 PFAM blue (type 1) copper domain protein - - - 0.000001504 53.0
SYD3_k127_6688822_0 PFAM transposase IS116 IS110 IS902 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007116 313.0
SYD3_k127_6694052_0 Protein of unknown function (DUF998) - - - 0.00000000000000000000000000000000000000000003222 168.0
SYD3_k127_6694052_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000004808 165.0
SYD3_k127_6694052_2 Methyltransferase domain K07003 - - 0.00000000000000000000000000001335 128.0
SYD3_k127_6694052_4 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000625 81.0
SYD3_k127_6752951_0 denitrification pathway K02569,K15876 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003602 349.0
SYD3_k127_6752951_1 endonuclease activity K07451 - - 0.00000000000000000000000000001702 126.0
SYD3_k127_6845735_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis - - - 0.000000000000000000000000000000000000000000002632 175.0
SYD3_k127_6845735_1 Glycosyl transferases group 1 K08256 - 2.4.1.345 0.000001018 59.0
SYD3_k127_6846831_0 ATPases associated with a variety of cellular activities K16785,K16786,K16787 - - 0.0000000000000000000000000000000000000000000000009672 191.0
SYD3_k127_6846831_1 HEAT repeats - - - 0.000000000000000000000000000000000000002081 167.0
SYD3_k127_6846831_2 PFAM ABC transporter related K16786,K16787 - - 0.0000000000000000000000000003547 120.0
SYD3_k127_6846831_3 PFAM peptidase M18 aminopeptidase I - - - 0.0000000000000000003916 87.0
SYD3_k127_6848301_0 Regulator of chromosome condensation (RCC1) repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000005088 252.0
SYD3_k127_6848301_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000003059 192.0
SYD3_k127_6864010_0 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 2.177e-205 666.0
SYD3_k127_6864010_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007462 492.0
SYD3_k127_6864010_10 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000072 264.0
SYD3_k127_6864010_11 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000000000000000000000000000000235 244.0
SYD3_k127_6864010_12 guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000002358 192.0
SYD3_k127_6864010_13 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000000000000000003461 175.0
SYD3_k127_6864010_14 Transcriptional regulator - - - 0.000000000000000000000000000000000004391 145.0
SYD3_k127_6864010_15 hydrolase activity, acting on ester bonds K01563 - 3.8.1.5 0.0000000000000000000000000000001486 134.0
SYD3_k127_6864010_16 - - - - 0.00000000000000000000000000004141 123.0
SYD3_k127_6864010_19 PRC-barrel domain - - - 0.000000001042 68.0
SYD3_k127_6864010_2 PFAM FAD linked oxidase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 475.0
SYD3_k127_6864010_20 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0001019 55.0
SYD3_k127_6864010_3 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000439 401.0
SYD3_k127_6864010_4 Fungal trichothecene efflux pump (TRI12) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 411.0
SYD3_k127_6864010_5 Putative neutral zinc metallopeptidase K07054 GO:0005575,GO:0005576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 314.0
SYD3_k127_6864010_6 PFAM Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000366 307.0
SYD3_k127_6864010_7 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007838 298.0
SYD3_k127_6864010_8 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005403 287.0
SYD3_k127_6864010_9 Glycosyltransferase Family 4 K12995 - 2.4.1.348 0.00000000000000000000000000000000000000000000000000000000000000000000000000001903 274.0
SYD3_k127_6872890_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 387.0
SYD3_k127_6872890_1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.000000000000000000000000000622 130.0
SYD3_k127_6872890_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.00000000229 65.0
SYD3_k127_6872890_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000002246 61.0
SYD3_k127_6881836_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases K04091 - 1.14.14.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004553 413.0
SYD3_k127_6881836_1 Aminotransferase class I and II K11358 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000558 395.0
SYD3_k127_6881836_11 histidine kinase HAMP region domain protein K02484 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000002136 235.0
SYD3_k127_6881836_12 Tetracyclin repressor, C-terminal all-alpha domain - - - 0.0000000000000000000000000000000000000000000000000000000000002316 219.0
SYD3_k127_6881836_13 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000002715 216.0
SYD3_k127_6881836_14 of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000001771 209.0
SYD3_k127_6881836_16 - - - - 0.00000000000000000000000000000000000000000000000001173 184.0
SYD3_k127_6881836_17 guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000001482 190.0
SYD3_k127_6881836_18 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000005903 194.0
SYD3_k127_6881836_19 Protein of unknown function (DUF1385) - - - 0.000000000000000000000000000000000000000005992 167.0
SYD3_k127_6881836_2 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 383.0
SYD3_k127_6881836_20 Probable zinc-ribbon domain - - - 0.00000000000000000000000000003552 119.0
SYD3_k127_6881836_21 Pfam:DUF385 - - - 0.00000000000000000000000000003741 125.0
SYD3_k127_6881836_22 Secreted repeat of unknown function - - - 0.0000000000000000000000003508 116.0
SYD3_k127_6881836_23 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000001952 107.0
SYD3_k127_6881836_24 Alkylmercury lyase - - - 0.000000000000000000001316 104.0
SYD3_k127_6881836_25 - - - - 0.000000000000000001492 101.0
SYD3_k127_6881836_26 pyridoxamine 5'-phosphate oxidase - - - 0.00000000000000001528 90.0
SYD3_k127_6881836_27 Non-essential cell division protein that could be required for efficient cell constriction - - - 0.00000001772 68.0
SYD3_k127_6881836_28 - - - - 0.00004949 56.0
SYD3_k127_6881836_29 Mediates bacterial resistance to the antibiotics streptomycin and spectomycin K00984 - 2.7.7.47 0.0001244 53.0
SYD3_k127_6881836_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006021 289.0
SYD3_k127_6881836_31 GNAT family acetyltransferase - - - 0.0002773 49.0
SYD3_k127_6881836_4 Ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009049 277.0
SYD3_k127_6881836_5 Two component transcriptional regulator, winged helix family K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000097 257.0
SYD3_k127_6881836_6 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002363 248.0
SYD3_k127_6881836_7 PFAM Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002464 239.0
SYD3_k127_6881836_8 MafB19-like deaminase K01485 - 3.5.4.1 0.000000000000000000000000000000000000000000000000000000000000000004591 228.0
SYD3_k127_6881836_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000004946 239.0
SYD3_k127_6890368_0 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009133 496.0
SYD3_k127_6890368_1 Beta-eliminating lyase K01667,K01668 - 4.1.99.1,4.1.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000553 472.0
SYD3_k127_6890368_2 Sterol carrier protein domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 339.0
SYD3_k127_6890368_3 PFAM Rhomboid family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001012 250.0
SYD3_k127_6890903_0 Voltage gated chloride channel - - - 4.611e-203 644.0
SYD3_k127_6890903_1 ABC transporter, ATP-binding protein K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 294.0
SYD3_k127_6890903_2 Appr-1'-p processing enzyme - - - 0.000000000000000000000000000000000000000000000000001011 199.0
SYD3_k127_6890903_3 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000007678 185.0
SYD3_k127_6892042_0 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008903 464.0
SYD3_k127_6893885_0 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 379.0
SYD3_k127_6893885_1 ABC transporter substrate binding protein - - - 0.0000000000000000000000002116 107.0
SYD3_k127_6895950_0 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 523.0
SYD3_k127_6895950_1 Peptidase family M3 K01392 - 3.4.24.15 0.0000000000000000000000000000000000000000005445 168.0
SYD3_k127_6895950_2 signal transduction protein containing a membrane domain an EAL and a GGDEF domain K21023 - 2.7.7.65 0.00000006135 65.0
SYD3_k127_6911981_0 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005087 306.0
SYD3_k127_6911981_1 glycogen (starch) synthase activity K16148 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0071704,GO:1901576 2.4.1.342 0.00000000000000000000000000000000000000000000000000000000000000000000000001208 255.0
SYD3_k127_6911981_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000008203 232.0
SYD3_k127_6911981_3 ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000001031 161.0
SYD3_k127_6919923_0 Seven times multi-haem cytochrome CxxCH - - - 0.0000000000000000000000000000000000000000000000000000000006163 205.0
SYD3_k127_6925420_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 GO:0000287,GO:0003674,GO:0003824,GO:0003864,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0016742,GO:0019752,GO:0032787,GO:0034641,GO:0040007,GO:0042364,GO:0042398,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:0072330,GO:1901564,GO:1901566,GO:1901576 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000002521 220.0
SYD3_k127_6925420_1 DinB family - - - 0.0000000000000000000000000000000002766 137.0
SYD3_k127_6931757_0 5TM C-terminal transporter carbon starvation CstA K06200 - - 1.308e-241 758.0
SYD3_k127_6931757_1 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000001778 214.0
SYD3_k127_6934764_0 AcrB/AcrD/AcrF family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 561.0
SYD3_k127_6934764_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000004575 186.0
SYD3_k127_6943293_0 RNase_H superfamily - - - 3.675e-305 975.0
SYD3_k127_6943293_1 DNA ligase D, 3'-phosphoesterase domain K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 583.0
SYD3_k127_6943293_10 GyrI-like small molecule binding domain - - - 0.0000000000000000000000000000000006491 140.0
SYD3_k127_6943293_11 3-demethylubiquinone-9 3-O-methyltransferase activity K03428 - 2.1.1.11 0.0000000000000000000000000000007573 130.0
SYD3_k127_6943293_12 Protein of unknown function (DUF998) - - - 0.000000000000000000000000000001926 122.0
SYD3_k127_6943293_13 Patatin-like phospholipase - - - 0.00000000000000000000000002319 121.0
SYD3_k127_6943293_14 phosphatase - - - 0.0000000000000000000000002801 113.0
SYD3_k127_6943293_15 PFAM Haloacid dehalogenase domain protein hydrolase - - - 0.00000000000000000000009808 108.0
SYD3_k127_6943293_16 PRC-barrel domain - - - 0.0000000000000001344 85.0
SYD3_k127_6943293_17 - - - - 0.000002964 58.0
SYD3_k127_6943293_18 Tetratricopeptide repeat - - - 0.0001883 53.0
SYD3_k127_6943293_2 DegT/DnrJ/EryC1/StrS aminotransferase family K04127 - 5.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 462.0
SYD3_k127_6943293_3 Amino acid kinase family K00926 - 2.7.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005424 384.0
SYD3_k127_6943293_4 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K09065 - 2.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 316.0
SYD3_k127_6943293_5 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000003844 242.0
SYD3_k127_6943293_6 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000002956 216.0
SYD3_k127_6943293_7 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.000000000000000000000000000000000000000000000000000000000000629 226.0
SYD3_k127_6943293_8 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000000000001297 180.0
SYD3_k127_6943293_9 Transcriptional regulator - - - 0.000000000000000000000000000000000002331 146.0
SYD3_k127_6947858_0 ABC-type multidrug transport system, ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 392.0
SYD3_k127_6947858_1 ABC-type multidrug transport system, permease component K01992 - - 0.000000000000000000000000000000000000000000000000000000000584 217.0
SYD3_k127_6947858_2 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000202 209.0
SYD3_k127_6947858_3 spore germination - - - 0.000000000000000000000000001142 128.0
SYD3_k127_6947858_4 Transport permease protein K01421 - - 0.0000005641 61.0
SYD3_k127_6961533_0 PFAM Integral membrane protein TerC K05794 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009517 401.0
SYD3_k127_6961533_1 - K06862 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 291.0
SYD3_k127_6961533_2 - - - - 0.000000000000000004034 91.0
SYD3_k127_6985997_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 4.559e-236 760.0
SYD3_k127_6985997_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003509 619.0
SYD3_k127_6985997_10 Phage integrase, N-terminal SAM-like domain K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000515 270.0
SYD3_k127_6985997_11 creatinase K01262,K01271 - 3.4.11.9,3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000002794 271.0
SYD3_k127_6985997_12 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000006103 252.0
SYD3_k127_6985997_13 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000003004 245.0
SYD3_k127_6985997_14 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000001241 229.0
SYD3_k127_6985997_15 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000714 229.0
SYD3_k127_6985997_16 Maltose acetyltransferase K00661 - 2.3.1.79 0.000000000000000000000000000000000000000000000000000000000000129 225.0
SYD3_k127_6985997_17 TRANSCRIPTIONal - - - 0.000000000000000000000000000000000000000000000000000000002067 218.0
SYD3_k127_6985997_18 Belongs to the pseudouridine synthase RsuA family K06178,K06182 - 5.4.99.21,5.4.99.22 0.00000000000000000000000000000000000000000000000000009425 205.0
SYD3_k127_6985997_19 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000002458 198.0
SYD3_k127_6985997_2 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 590.0
SYD3_k127_6985997_20 Catalyzes the circularization of gamma-N-acetyl- alpha,gamma-diaminobutyric acid (ADABA) to ectoine (1,4,5,6- tetrahydro-2-methyl-4-pyrimidine carboxylic acid), which is an excellent osmoprotectant K06720 - 4.2.1.108 0.00000000000000000000000000000000000000000000006302 176.0
SYD3_k127_6985997_21 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000008943 175.0
SYD3_k127_6985997_22 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000005757 179.0
SYD3_k127_6985997_23 Cbs domain - - - 0.0000000000000000000000000000000000000002452 158.0
SYD3_k127_6985997_24 zinc metalloprotease - - - 0.00000000000000000000000000000000000002534 151.0
SYD3_k127_6985997_25 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.0000000000000000000000000000000000006002 151.0
SYD3_k127_6985997_26 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000008433 141.0
SYD3_k127_6985997_27 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.0000000000000000000000000000001487 130.0
SYD3_k127_6985997_28 PFAM membrane-flanked domain - - - 0.00000000000000000000000001459 119.0
SYD3_k127_6985997_29 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000000004983 107.0
SYD3_k127_6985997_3 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 442.0
SYD3_k127_6985997_30 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000000000004608 98.0
SYD3_k127_6985997_31 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000002902 97.0
SYD3_k127_6985997_32 mRNA catabolic process - - - 0.00000000000000001084 89.0
SYD3_k127_6985997_33 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.000000000000003747 77.0
SYD3_k127_6985997_34 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000476 63.0
SYD3_k127_6985997_35 Baseplate J-like protein - - - 0.00003113 58.0
SYD3_k127_6985997_36 YtxH-like protein - - - 0.0004426 50.0
SYD3_k127_6985997_4 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 418.0
SYD3_k127_6985997_5 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006697 358.0
SYD3_k127_6985997_6 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 344.0
SYD3_k127_6985997_7 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007462 326.0
SYD3_k127_6985997_8 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006538 314.0
SYD3_k127_6985997_9 cell division - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 320.0
SYD3_k127_6988895_0 Family 4 glycosyl hydrolase K01222,K07406 - 3.2.1.22,3.2.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 485.0
SYD3_k127_6988895_1 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion K01057,K02564 - 3.1.1.31,3.5.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000001315 257.0
SYD3_k127_6988895_2 N-acetylglucosamine kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000003095 240.0
SYD3_k127_7003958_0 response to heat K03694,K03695 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.0 1083.0
SYD3_k127_7003958_1 RNHCP domain - - - 0.0000000000000000000000000000000000000000000000001128 180.0
SYD3_k127_7003958_2 heat shock protein DnaJ domain protein K05516 - - 0.0000000000000000000000000000000000000000002882 169.0
SYD3_k127_7003958_3 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000008297 140.0
SYD3_k127_7003958_4 Domain of unknown function (DU1801) - - - 0.0000000000000000000001338 107.0
SYD3_k127_7048259_0 GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000001808 229.0
SYD3_k127_7048259_1 COG0671 Membrane-associated phospholipid phosphatase K19302 - 3.6.1.27 0.0000000000000000000001743 106.0
SYD3_k127_7048259_2 chaperone-mediated protein folding - - - 0.0000000432 66.0
SYD3_k127_7074526_0 Carbon-nitrogen hydrolase K01431 - 3.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 447.0
SYD3_k127_7074526_1 Colicin V production protein - GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0009268,GO:0009405,GO:0009628,GO:0010447,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051704,GO:0071944 - 0.00000000003843 73.0
SYD3_k127_7083264_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 2.318e-216 694.0
SYD3_k127_7083264_1 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K03518 - 1.2.5.3 0.00002615 54.0
SYD3_k127_7091506_0 Alpha beta hydrolase - - - 0.00000000000001795 83.0
SYD3_k127_7093518_0 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K09461 - 1.14.13.40 0.0 1043.0
SYD3_k127_7093518_1 tryptophan 2,3-dioxygenase activity K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006342 355.0
SYD3_k127_7093518_2 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 329.0
SYD3_k127_7093518_3 COG0520 Selenocysteine lyase - - - 0.0000000000000000000000000000000000000002356 154.0
SYD3_k127_7098454_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 325.0
SYD3_k127_7098454_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000026 216.0
SYD3_k127_7098454_2 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000002226 87.0
SYD3_k127_7098454_3 YtxH-like protein - - - 0.0001282 51.0
SYD3_k127_7102930_0 histidine kinase HAMP region domain protein - - - 0.00000000000000000000004453 115.0
SYD3_k127_7102930_1 EamA-like transporter family - - - 0.00000002218 63.0
SYD3_k127_7102930_2 PAS modulated sigma54 specific transcriptional regulator, Fis family - - - 0.000002427 55.0
SYD3_k127_7112082_0 ABC transporter related K02056 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004214 616.0
SYD3_k127_7112082_1 Nucleotidyl transferase K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 484.0
SYD3_k127_7112082_10 PFAM Binding-protein-dependent transport system inner membrane component K02025,K10233 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 308.0
SYD3_k127_7112082_11 Protein of unknown function (DUF5131) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 306.0
SYD3_k127_7112082_12 PFAM glycosyl transferase, family 51 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003946 330.0
SYD3_k127_7112082_13 ABC transporter substrate-binding protein PnrA-like K07335 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008491 301.0
SYD3_k127_7112082_14 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003149 284.0
SYD3_k127_7112082_15 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000009836 241.0
SYD3_k127_7112082_16 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000007839 224.0
SYD3_k127_7112082_17 ABC transporter, substratebinding protein K10232 - - 0.000000000000000000000000000000000000000000000000000000000009896 227.0
SYD3_k127_7112082_18 Adenosine/AMP deaminase - - - 0.00000000000000000000000000000000000000000000000000000000003269 229.0
SYD3_k127_7112082_2 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005126 460.0
SYD3_k127_7112082_20 Haloacid dehalogenase-like hydrolase - GO:0000121,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009056,GO:0009395,GO:0009987,GO:0016042,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0030145,GO:0042578,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0046434,GO:0046475,GO:0046486,GO:0046503,GO:0046872,GO:0046914,GO:0046983,GO:0050897,GO:0071704,GO:1901575 - 0.000000000000000000000000000000000000000000000006114 182.0
SYD3_k127_7112082_21 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000000000000000000000000000001104 181.0
SYD3_k127_7112082_22 ATP-grasp superfamily - - - 0.0000000000000000000000000000000000000000001527 170.0
SYD3_k127_7112082_23 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000000000000000000002156 163.0
SYD3_k127_7112082_24 Bacterial extracellular solute-binding protein K10232 - - 0.000000000000000000000000000000000002109 156.0
SYD3_k127_7112082_25 NUDIX domain K01515 - 3.6.1.13 0.00000000000000000000000000000000001088 155.0
SYD3_k127_7112082_26 aminopeptidase N - - - 0.0000000000000000000000000000000003127 152.0
SYD3_k127_7112082_27 COG1668 ABC-type Na efflux pump, permease component - - - 0.0000000000000000000000000000000005882 152.0
SYD3_k127_7112082_28 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000815 132.0
SYD3_k127_7112082_29 Psort location Cytoplasmic, score - - - 0.000000000000000000000000004036 123.0
SYD3_k127_7112082_3 ATPases associated with a variety of cellular activities K10112,K10195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006986 456.0
SYD3_k127_7112082_30 Peptidase, M23 K21471 - - 0.000000000000000000000000006999 125.0
SYD3_k127_7112082_31 Tetratricopeptide repeat - - - 0.0000000000000000000000005618 108.0
SYD3_k127_7112082_32 Belongs to the 'phage' integrase family - - - 0.000000000000000000006338 106.0
SYD3_k127_7112082_33 Belongs to the 'phage' integrase family - - - 0.00000000000000000005498 105.0
SYD3_k127_7112082_34 Transglycosylase associated protein - - - 0.0000000000001123 74.0
SYD3_k127_7112082_35 DNA binding - - - 0.000000000006629 76.0
SYD3_k127_7112082_36 Short-chain dehydrogenase reductase Sdr - - - 0.000000000007799 76.0
SYD3_k127_7112082_37 von Willebrand factor, type A K07114 - - 0.000000000015 79.0
SYD3_k127_7112082_38 aspartic-type endopeptidase activity K02278,K02654 - 3.4.23.43 0.0000000002054 70.0
SYD3_k127_7112082_39 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 0.000000558 61.0
SYD3_k127_7112082_4 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008752 420.0
SYD3_k127_7112082_40 - - - - 0.000002321 50.0
SYD3_k127_7112082_41 CsbD-like - - - 0.000005563 50.0
SYD3_k127_7112082_43 Helix-turn-helix domain - - - 0.0003927 49.0
SYD3_k127_7112082_44 Glutaredoxin - - - 0.0005673 46.0
SYD3_k127_7112082_5 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 406.0
SYD3_k127_7112082_6 Inosine-uridine preferring nucleoside hydrolase K10213 - 3.2.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003667 361.0
SYD3_k127_7112082_7 PFAM Binding-protein-dependent transport system inner membrane component K10119,K10234 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000775 357.0
SYD3_k127_7112082_8 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 341.0
SYD3_k127_7112082_9 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 323.0
SYD3_k127_7129545_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 578.0
SYD3_k127_7129545_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 315.0
SYD3_k127_7132034_0 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000139 282.0
SYD3_k127_7132034_1 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000002404 213.0
SYD3_k127_7132034_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000002911 179.0
SYD3_k127_7132034_3 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.000000000000000000008249 104.0
SYD3_k127_7132034_4 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.000000000000000004143 85.0
SYD3_k127_7143407_0 glycogen (starch) synthase activity K16148 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0071704,GO:1901576 2.4.1.342 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 304.0
SYD3_k127_7143407_1 ATPase P-type (Transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0000000000007903 74.0
SYD3_k127_7143407_2 Response regulator receiver domain - - - 0.0005125 49.0
SYD3_k127_7150793_0 histidine kinase A domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002567 305.0
SYD3_k127_7150793_1 usher protein - - - 0.000000006063 62.0
SYD3_k127_7156341_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006842 392.0
SYD3_k127_7156341_1 Histidine kinase - - - 0.00000000003378 70.0
SYD3_k127_7163498_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006925 554.0
SYD3_k127_7163498_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007288 303.0
SYD3_k127_7163498_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K03074,K12257 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000002387 241.0
SYD3_k127_7163498_3 TRANSCRIPTIONal - - - 0.00000000000000000000000000000000000000005661 168.0
SYD3_k127_7163498_4 UvrD REP helicase K03657 - 3.6.4.12 0.00000000004843 70.0
SYD3_k127_7169663_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000007022 243.0
SYD3_k127_7221154_0 Glycosyl hydrolases family 15 - - - 4.692e-320 990.0
SYD3_k127_7221154_1 Serine hydrolase involved in the detoxification of formaldehyde - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 478.0
SYD3_k127_7221154_2 TIGRFAM arsenite-activated ATPase ArsA K01551 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 407.0
SYD3_k127_7221154_3 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007047 367.0
SYD3_k127_7221154_4 Neutral zinc metallopeptidase K07054 GO:0005575,GO:0005576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009281 305.0
SYD3_k127_7221154_5 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000002898 176.0
SYD3_k127_7221154_6 Haem-binding domain - - - 0.00000000000000000000000000000000000000000000001338 175.0
SYD3_k127_7221154_7 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000001025 166.0
SYD3_k127_7221154_8 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000553 154.0
SYD3_k127_7221912_0 Glycogen debranching enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 572.0
SYD3_k127_7226489_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008664 332.0
SYD3_k127_7226489_1 Utp--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 310.0
SYD3_k127_7226489_2 PFAM Mur ligase family, glutamate ligase domain K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003538 303.0
SYD3_k127_7226489_3 PFAM oxidoreductase, molybdopterin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001151 259.0
SYD3_k127_7226489_4 dihydropteroate synthase K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000015 198.0
SYD3_k127_7226489_5 Thioredoxin-like domain K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.000000000000000000000000000000007296 130.0
SYD3_k127_7226489_6 general stress protein B in uncultured methanogenic archaeon (Q0W564) - - - 0.00000000001639 72.0
SYD3_k127_7229964_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003123 394.0
SYD3_k127_7229964_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.000000000000000000000000002929 126.0
SYD3_k127_7229964_2 - - - - 0.00000000002297 73.0
SYD3_k127_7252572_0 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.0000000000000000000000000000000000000000000000000002714 199.0
SYD3_k127_7252572_1 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.0000000000000000000000000003488 121.0
SYD3_k127_7252572_2 competence protein - - - 0.00000000000000000000002816 105.0
SYD3_k127_72546_0 Methyltransferase type 11 K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751 334.0
SYD3_k127_72546_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005393 295.0
SYD3_k127_72546_10 PFAM response regulator receiver - - - 0.000000000000000000000000006782 114.0
SYD3_k127_72546_11 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000007482 111.0
SYD3_k127_72546_12 - - - - 0.00000000000000000000001055 113.0
SYD3_k127_72546_13 diguanylate cyclase - - - 0.00000000000000000001738 105.0
SYD3_k127_72546_14 Low molecular weight phosphotyrosine protein phosphatase K03892 - - 0.000000000000000002486 88.0
SYD3_k127_72546_15 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000000000006624 85.0
SYD3_k127_72546_16 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000000653 53.0
SYD3_k127_72546_17 recombinase activity - - - 0.0001792 48.0
SYD3_k127_72546_2 glycosyl K16444 - 2.4.1.310 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008669 270.0
SYD3_k127_72546_3 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002849 261.0
SYD3_k127_72546_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000001067 178.0
SYD3_k127_72546_5 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000005382 188.0
SYD3_k127_72546_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000003135 164.0
SYD3_k127_72546_7 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000001146 162.0
SYD3_k127_72546_8 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000004838 128.0
SYD3_k127_72546_9 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000001678 126.0
SYD3_k127_7303954_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 594.0
SYD3_k127_7303954_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 498.0
SYD3_k127_7303954_2 MacB-like periplasmic core domain - - - 0.00000000000000000000000000001716 123.0
SYD3_k127_7313931_0 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000002306 93.0
SYD3_k127_7356922_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007858 450.0
SYD3_k127_7356922_1 Arginosuccinate synthase K01940 - 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008505 408.0
SYD3_k127_7356922_2 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 331.0
SYD3_k127_7356922_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000001957 235.0
SYD3_k127_7356922_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000009377 185.0
SYD3_k127_740007_0 Amino acid permease - - - 2.555e-205 660.0
SYD3_k127_740007_1 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 547.0
SYD3_k127_740007_10 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000001556 235.0
SYD3_k127_740007_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000001113 213.0
SYD3_k127_740007_12 PFAM ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000001103 227.0
SYD3_k127_740007_13 Response regulator receiver K07667 - - 0.000000000000000000000000000000000000000000000000000001374 207.0
SYD3_k127_740007_14 Belongs to the glycosyl hydrolase 26 family - - - 0.00000000000000000000000000000000000000000000009477 179.0
SYD3_k127_740007_15 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000004365 166.0
SYD3_k127_740007_16 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.000000000000000000000000000000000001285 154.0
SYD3_k127_740007_17 OsmC-like protein K04063 - - 0.00000000000000000000000000000000001929 141.0
SYD3_k127_740007_18 Helix-turn-helix domain - - - 0.0000000000000000000000000000000002119 138.0
SYD3_k127_740007_19 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000008232 135.0
SYD3_k127_740007_2 Saccharopine dehydrogenase K00290 - 1.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 502.0
SYD3_k127_740007_20 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000001965 128.0
SYD3_k127_740007_21 - - - - 0.00000000000000000000000001979 111.0
SYD3_k127_740007_22 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000001064 117.0
SYD3_k127_740007_23 ADP binding - - - 0.0000000000000000000000003641 118.0
SYD3_k127_740007_24 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000001204 115.0
SYD3_k127_740007_25 COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K03088 - - 0.000000000000000000000003315 109.0
SYD3_k127_740007_26 Belongs to the LarC family K09121 - 4.99.1.12 0.00000000000000000000000532 111.0
SYD3_k127_740007_27 nitrile biosynthetic process - - - 0.0000000000000000001284 101.0
SYD3_k127_740007_28 PFAM cytochrome c oxidase subunit I K00404 - 1.9.3.1 0.0000000000000000119 97.0
SYD3_k127_740007_29 Protein conserved in bacteria - - - 0.00000000000001162 87.0
SYD3_k127_740007_3 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004855 368.0
SYD3_k127_740007_31 Transcriptional regulatory protein, C terminal - - - 0.00003013 57.0
SYD3_k127_740007_32 - - - - 0.00005155 48.0
SYD3_k127_740007_33 PQQ enzyme repeat - - - 0.0001401 51.0
SYD3_k127_740007_4 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000042 355.0
SYD3_k127_740007_5 galactose-1-phosphate uridylyltransferase K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004143 307.0
SYD3_k127_740007_6 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002513 286.0
SYD3_k127_740007_7 phosphoenolpyruvate carboxykinase (ATP) activity K01610 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005488,GO:0005509,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0017076,GO:0019318,GO:0019319,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046872,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901576 4.1.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000003984 288.0
SYD3_k127_740007_8 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000009936 262.0
SYD3_k127_740007_9 Regulates the transcription of the pyrimidine nucleotide (pyr) operon in response to exogenous pyrimidines K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000007029 234.0
SYD3_k127_7408936_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 3.981e-219 694.0
SYD3_k127_7408936_1 Belongs to the ABC transporter superfamily K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 421.0
SYD3_k127_7408936_2 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033,K12369 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002689 413.0
SYD3_k127_7408936_3 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 418.0
SYD3_k127_7408936_4 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034,K12370 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 340.0
SYD3_k127_7408936_5 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000002265 236.0
SYD3_k127_7478416_0 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 286.0
SYD3_k127_7478416_1 Pyruvate ferredoxin/flavodoxin oxidoreductase K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000003738 277.0
SYD3_k127_7478416_2 coenzyme F420 binding - - - 0.00000000000000000000000000000007629 127.0
SYD3_k127_7478416_3 Ferric reductase like transmembrane component - - - 0.000005797 56.0
SYD3_k127_7501361_0 Phosphoenolpyruvate phosphomutase K01637 - 4.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 595.0
SYD3_k127_7501361_1 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 487.0
SYD3_k127_7501361_10 peptidase activity K01286 - 3.4.16.4 0.000000000000000000000000000000000000007778 161.0
SYD3_k127_7501361_11 Aminoacyl-tRNA editing domain - - - 0.00000000000000000000000000000000005075 139.0
SYD3_k127_7501361_12 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K05524 - - 0.0000000000000000000000000002589 117.0
SYD3_k127_7501361_13 PFAM Bacterial regulatory proteins, tetR family - - - 0.000000000000000000273 95.0
SYD3_k127_7501361_14 Aminoacyl-tRNA editing domain K19055 - - 0.00000000008377 73.0
SYD3_k127_7501361_15 transcriptional regulator - - - 0.000000005474 66.0
SYD3_k127_7501361_2 protein methyltransferase activity K11434,K15984,K20421 - 2.1.1.242,2.1.1.303,2.1.1.319 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003361 473.0
SYD3_k127_7501361_3 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004572 408.0
SYD3_k127_7501361_4 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 398.0
SYD3_k127_7501361_5 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 304.0
SYD3_k127_7501361_6 Threonyl alanyl tRNA synthetase SAD K07050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000118 284.0
SYD3_k127_7501361_7 Major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000284 286.0
SYD3_k127_7501361_8 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000003256 234.0
SYD3_k127_7501361_9 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000004494 216.0
SYD3_k127_7517609_0 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 382.0
SYD3_k127_7517609_1 proline dipeptidase activity - - - 0.0000000000000000000000007571 109.0
SYD3_k127_7549979_0 Belongs to the PstS family K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008358 374.0
SYD3_k127_7549979_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 330.0
SYD3_k127_7549979_2 Phosphate transport system permease protein PstA K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008854 290.0
SYD3_k127_7549979_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000001045 256.0
SYD3_k127_7554280_0 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 284.0
SYD3_k127_7554280_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000001507 222.0
SYD3_k127_7554280_2 AI-2E family transporter - - - 0.00000000000000000000029 109.0
SYD3_k127_7602277_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 2.365e-306 964.0
SYD3_k127_7602277_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 8.752e-236 745.0
SYD3_k127_7602277_10 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 386.0
SYD3_k127_7602277_11 oxidase, subunit II K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003214 321.0
SYD3_k127_7602277_12 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 321.0
SYD3_k127_7602277_13 PFAM ComEC Rec2-related protein K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 333.0
SYD3_k127_7602277_14 oligoendopeptidase F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 312.0
SYD3_k127_7602277_15 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000178 290.0
SYD3_k127_7602277_16 Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway K16329 - 4.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000236 271.0
SYD3_k127_7602277_17 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000003865 216.0
SYD3_k127_7602277_18 PFAM Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000003264 190.0
SYD3_k127_7602277_19 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000000000000000000000000000000000001169 180.0
SYD3_k127_7602277_2 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 1.39e-224 745.0
SYD3_k127_7602277_20 MoaE protein K21142 - 2.8.1.12 0.00000000000000000000000000000000000000002851 169.0
SYD3_k127_7602277_21 PFAM NUDIX domain - - - 0.0000000000000000000000000000000000000001705 160.0
SYD3_k127_7602277_22 Transmembrane secretion effector - - - 0.00000000000000000000000000000000004566 153.0
SYD3_k127_7602277_23 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000006137 132.0
SYD3_k127_7602277_24 Methyltransferase domain - - - 0.00000000000000000000000000000047 138.0
SYD3_k127_7602277_25 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000002104 127.0
SYD3_k127_7602277_26 PFAM Peptidase family M23 - - - 0.000000000000000000000000000785 123.0
SYD3_k127_7602277_27 Riboflavin biosynthesis protein RibD - - - 0.000000000000000000000000007412 121.0
SYD3_k127_7602277_28 pfkB family carbohydrate kinase - - - 0.000000000000000000000003037 115.0
SYD3_k127_7602277_29 UbiA prenyltransferase family - - - 0.000000000000000000000359 106.0
SYD3_k127_7602277_3 Aldehyde dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 569.0
SYD3_k127_7602277_30 Helix-hairpin-helix motif K02237 - - 0.000000000000000000001124 104.0
SYD3_k127_7602277_32 membrane transporter protein K07090 - - 0.0000000000000000002748 99.0
SYD3_k127_7602277_33 Uncharacterized conserved protein (DUF2203) - - - 0.0000000000000000005914 94.0
SYD3_k127_7602277_34 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.00000000000000004614 84.0
SYD3_k127_7602277_35 Rieske-like [2Fe-2S] domain K05710 - - 0.0000000000000000654 86.0
SYD3_k127_7602277_36 TIGRFAM DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.0000000000000001407 93.0
SYD3_k127_7602277_37 Carotenoid biosynthesis protein K22502 - 5.5.1.19 0.0000000000000001867 91.0
SYD3_k127_7602277_38 Acetyltransferase (GNAT) domain - - - 0.00000000000001326 83.0
SYD3_k127_7602277_39 - - - - 0.000000000001204 75.0
SYD3_k127_7602277_4 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007604 569.0
SYD3_k127_7602277_40 PFAM Metal-dependent phosphohydrolase, HD - - - 0.000000000003411 74.0
SYD3_k127_7602277_41 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.0000000001972 75.0
SYD3_k127_7602277_42 exodeoxyribonuclease I activity K00390 - 1.8.4.10,1.8.4.8 0.000000005289 66.0
SYD3_k127_7602277_43 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000006329 63.0
SYD3_k127_7602277_44 Acetyltransferase (GNAT) domain - - - 0.00000002396 65.0
SYD3_k127_7602277_45 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000006368 64.0
SYD3_k127_7602277_46 - - - - 0.00001201 56.0
SYD3_k127_7602277_47 Recombinase zinc beta ribbon domain - - - 0.00001261 49.0
SYD3_k127_7602277_49 - - - - 0.00004233 56.0
SYD3_k127_7602277_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 533.0
SYD3_k127_7602277_50 - - - - 0.000355 46.0
SYD3_k127_7602277_6 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 491.0
SYD3_k127_7602277_7 ubiquinol oxidase subunit I K00425 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003368 464.0
SYD3_k127_7602277_8 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00647,K09458 - 2.3.1.179,2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009162 441.0
SYD3_k127_7602277_9 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005199 384.0
SYD3_k127_7632205_0 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000003192 213.0
SYD3_k127_7632205_1 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000004907 160.0
SYD3_k127_7648499_0 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 392.0
SYD3_k127_7648499_1 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 309.0
SYD3_k127_7648499_2 Cell shape-determining protein MreC K03570 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007163,GO:0008150,GO:0008360,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0030428,GO:0031224,GO:0031226,GO:0042546,GO:0043621,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071554,GO:0071840,GO:0071944,GO:0071963 - 0.00000000000000000000000000000000000000002358 166.0
SYD3_k127_7648499_3 cell shape determining protein MreB K03569 - - 0.000000000001156 67.0
SYD3_k127_7648499_4 shape-determining protein MreD K03571 - - 0.00007101 55.0
SYD3_k127_766442_0 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007753 575.0
SYD3_k127_766442_1 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 325.0
SYD3_k127_766442_2 histone deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004919 301.0
SYD3_k127_766442_3 Fumarylacetoacetate (FAA) hydrolase family K16171 - 3.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004178 276.0
SYD3_k127_766442_4 helix_turn_helix, cAMP Regulatory protein K01420,K10914,K21561,K21564 - - 0.00000000000000000000000000000000000000005945 167.0
SYD3_k127_766442_5 SnoaL-like domain - - - 0.0000000000005268 71.0
SYD3_k127_766442_6 transporter - - - 0.0000000000233 76.0
SYD3_k127_766442_7 - - - - 0.000004427 54.0
SYD3_k127_7681336_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 2.776e-292 913.0
SYD3_k127_7692859_0 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 307.0
SYD3_k127_7692859_1 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004499 318.0
SYD3_k127_7692859_2 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006986 297.0
SYD3_k127_7692859_3 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001542 287.0
SYD3_k127_7692859_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 - 1.13.11.2 0.0000000000000000000000000000000000001413 145.0
SYD3_k127_7692859_5 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.0000000000000000000000000000000003245 146.0
SYD3_k127_7692859_6 Alpha beta - - - 0.00000000000000000000000004149 123.0
SYD3_k127_7692859_8 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.0002429 45.0
SYD3_k127_782159_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 5.481e-209 653.0
SYD3_k127_7852472_0 PFAM Glycosyl transferase family 2 K20534 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006448 338.0
SYD3_k127_7852472_1 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0004649 52.0
SYD3_k127_7925336_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003991 286.0
SYD3_k127_7999310_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 491.0
SYD3_k127_7999310_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009812 309.0
SYD3_k127_8167017_0 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000005925 183.0
SYD3_k127_8167017_1 Protein of unknown function (DUF2723) - - - 0.0000000000000000000000000000000004239 150.0
SYD3_k127_8167017_2 phosphatidylinositol metabolic process K13671 - - 0.00000000000000000000000005374 123.0
SYD3_k127_8186804_0 Dehydrogenase K00140 - 1.2.1.18,1.2.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004307 557.0
SYD3_k127_8186804_1 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008109 273.0
SYD3_k127_8186804_10 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000125 132.0
SYD3_k127_8186804_11 Histidine phosphatase superfamily (branch 1) K01834 - 5.4.2.11 0.00000000000000000000000000002545 128.0
SYD3_k127_8186804_12 Protein of unknown function (DUF971) - - - 0.00000000000000000000000000002746 121.0
SYD3_k127_8186804_13 Predicted permease K07089 - - 0.000000000000000000000000002579 113.0
SYD3_k127_8186804_14 redox-active disulfide protein 2 - - - 0.00000000000000000000004299 102.0
SYD3_k127_8186804_15 Sigma-70 region 2 K03088 - - 0.000000000000006002 81.0
SYD3_k127_8186804_2 N-acetylglucosaminylinositol deacetylase activity K18455 - 3.5.1.115 0.00000000000000000000000000000000000000000000000000000000000000000002951 245.0
SYD3_k127_8186804_3 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000001385 236.0
SYD3_k127_8186804_4 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431 - 3.5.1.6 0.0000000000000000000000000000000000000000000000000000000003255 213.0
SYD3_k127_8186804_5 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000002535 183.0
SYD3_k127_8186804_6 EamA-like transporter family - - - 0.00000000000000000000000000000000000000002124 165.0
SYD3_k127_8186804_7 Raf kinase inhibitor-like protein, YbhB YbcL family K06910 - - 0.000000000000000000000000000000000000004432 151.0
SYD3_k127_8186804_8 response to heat K03668,K09914 - - 0.0000000000000000000000000000000001725 143.0
SYD3_k127_8186804_9 Nitroreductase family - - - 0.000000000000000000000000000000001289 136.0
SYD3_k127_8207893_0 Dihydroorotate dehydrogenase K17723 GO:0003674,GO:0003824,GO:0003954,GO:0006139,GO:0006206,GO:0006208,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016491,GO:0016651,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 1.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005527 376.0
SYD3_k127_8207893_1 Fungalysin metallopeptidase (M36) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002861 317.0
SYD3_k127_8207893_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000008343 225.0
SYD3_k127_8207893_3 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000002042 110.0
SYD3_k127_8207893_4 Iron-containing redox enzyme K06137 - 1.3.3.11 0.000000000000003533 85.0
SYD3_k127_8213538_0 Phenazine biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007857 369.0
SYD3_k127_8213538_1 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001322 266.0
SYD3_k127_8213538_3 Protein of unknown function (DUF2892) - - - 0.000000000000000003183 87.0
SYD3_k127_8213538_4 EamA-like transporter family - - - 0.000002284 57.0
SYD3_k127_8216850_0 acetyltransferase component of pyruvate dehydrogenase complex K00627,K00658 - 2.3.1.12,2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004979 381.0
SYD3_k127_8216850_1 Diacylglycerol kinase catalytic domain - - - 0.0000000000000000000000000003708 119.0
SYD3_k127_8216850_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.000001952 52.0
SYD3_k127_8227388_0 membrane - - - 0.000000000000000000000000000000000000000000001149 167.0
SYD3_k127_8227388_1 - - - - 0.000000000000000004928 85.0
SYD3_k127_8227388_2 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.0005536 46.0
SYD3_k127_8244578_0 Subtilase family K17734 - - 2.275e-223 708.0
SYD3_k127_8244578_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0034220,GO:0040007,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 1.9.3.1 5.939e-216 683.0
SYD3_k127_8244578_10 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 407.0
SYD3_k127_8244578_11 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 394.0
SYD3_k127_8244578_12 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009773 407.0
SYD3_k127_8244578_13 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008058 355.0
SYD3_k127_8244578_14 Insulinase (Peptidase family M16) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009737 346.0
SYD3_k127_8244578_15 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004665 340.0
SYD3_k127_8244578_16 Serine threonine protein kinase involved in cell cycle control - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007265 278.0
SYD3_k127_8244578_17 major pilin protein fima - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000231 276.0
SYD3_k127_8244578_18 Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003123 261.0
SYD3_k127_8244578_19 Belongs to the peptidase S8 family K14645 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001514 251.0
SYD3_k127_8244578_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 6.235e-195 618.0
SYD3_k127_8244578_20 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000003294 242.0
SYD3_k127_8244578_21 transport, permease protein K01992 - - 0.000000000000000000000000000000000000000000000000001771 203.0
SYD3_k127_8244578_22 Cytochrome c oxidase caa3-type, assembly factor CtaG-related K02351,K07245 - - 0.000000000000000000000000000000000000000000000001181 201.0
SYD3_k127_8244578_23 Cytochrome c oxidase subunit III K02276,K02299 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 1.9.3.1 0.0000000000000000000000000000000000000000000003027 174.0
SYD3_k127_8244578_24 ABC-type transport system involved in multi-copper enzyme maturation permease component K01992 - - 0.000000000000000000000000000000000000000000006109 183.0
SYD3_k127_8244578_25 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0040007,GO:0042773,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044121,GO:0044237,GO:0044238,GO:0044281,GO:0044403,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0051704,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 0.0000000000000000000000000000000000000000001587 174.0
SYD3_k127_8244578_26 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000000000000000000000000005728 170.0
SYD3_k127_8244578_27 Protein of unknown function (DUF3037) - - - 0.00000000000000000000000000000000000000234 151.0
SYD3_k127_8244578_28 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000002985 154.0
SYD3_k127_8244578_29 rRNA binding - - - 0.0000000000000000000000000000000000001428 145.0
SYD3_k127_8244578_3 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008032 523.0
SYD3_k127_8244578_30 Thioredoxin - - - 0.000000000000000000000000000000002415 139.0
SYD3_k127_8244578_31 periplasmic protein thiol disulfide oxidoreductases, DsbE subfamily K02199 - - 0.00000000000000000000000000000001979 133.0
SYD3_k127_8244578_32 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000000000004528 132.0
SYD3_k127_8244578_33 Septum formation - - - 0.00000000000000000000000000004848 125.0
SYD3_k127_8244578_34 - - - - 0.00000000000000000000000001077 125.0
SYD3_k127_8244578_35 MobA-like NTP transferase domain K07141,K19190 - 1.1.1.328,2.7.7.76 0.0000000000000000000000004908 107.0
SYD3_k127_8244578_36 GAF domain - - - 0.000000000000000001963 96.0
SYD3_k127_8244578_37 VKc - - - 0.0000000000000004454 83.0
SYD3_k127_8244578_38 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.00000000000001168 76.0
SYD3_k127_8244578_39 Heavy metal translocating P-type atpase K01533,K01534,K12954,K17686 - 3.6.3.3,3.6.3.4,3.6.3.5,3.6.3.54 0.00000000006104 66.0
SYD3_k127_8244578_4 Bacterial protein of unknown function (DUF853) K06915 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 508.0
SYD3_k127_8244578_43 - - - - 0.00001542 50.0
SYD3_k127_8244578_5 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004779 490.0
SYD3_k127_8244578_6 Serine hydrolase involved in the detoxification of formaldehyde - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 473.0
SYD3_k127_8244578_7 MMPL family K06994,K20470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000705 470.0
SYD3_k127_8244578_8 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008247 456.0
SYD3_k127_8244578_9 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384,K03671 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 427.0
SYD3_k127_8245663_0 PFAM NADH Ubiquinone plastoquinone (complex I) K12137 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003484 303.0
SYD3_k127_8245663_1 NADH dehydrogenase - - - 0.000000000000000000000000009291 125.0
SYD3_k127_8247272_0 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 536.0
SYD3_k127_8263934_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000002297 241.0
SYD3_k127_8263934_1 PFAM MucB RseB K03598 - - 0.0000000000000000000000000000000000000000000000000474 190.0
SYD3_k127_8263934_2 Anti sigma-E protein RseA, N-terminal domain - - - 0.00000001226 63.0
SYD3_k127_8263934_3 PFAM glutaredoxin 2 - - - 0.00000004831 64.0
SYD3_k127_8263934_4 Positive regulator of sigma(E), RseC/MucC K03803 GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.00041 49.0
SYD3_k127_8274498_0 Major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006256 291.0
SYD3_k127_8274498_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000109 267.0
SYD3_k127_8274498_2 membrane - - - 0.00000000000000000000000000000000000000000000000000000000005797 211.0
SYD3_k127_8274498_3 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000001441 60.0
SYD3_k127_8274498_4 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0004827 44.0
SYD3_k127_8276662_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 431.0
SYD3_k127_8276662_1 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K02031,K15583 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 319.0
SYD3_k127_8276662_2 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003994 292.0
SYD3_k127_8276662_3 Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002527 284.0
SYD3_k127_8276662_4 phosphorelay signal transduction system K12132 - 2.7.11.1 0.0000000000000000000000000000002294 136.0
SYD3_k127_8276662_5 PFAM Biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.0000000000000000000000000000008772 138.0
SYD3_k127_8292370_0 Xaa-Pro aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004045 452.0
SYD3_k127_8292370_1 Aldose 1-epimerase K01785 - 5.1.3.3 0.00000000000000000004539 102.0
SYD3_k127_8295967_0 Protein of unknown function, DUF255 K06888 - - 0.00000000000000000000000000000000000000000000002405 189.0
SYD3_k127_8295967_1 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000009641 137.0
SYD3_k127_8295967_2 1,4-alpha-glucan branching enzyme activity K00700 - 2.4.1.18 0.000000000000000002636 97.0
SYD3_k127_8295967_3 Tetratricopeptide repeat - - - 0.000009263 48.0
SYD3_k127_8295967_4 - - - - 0.00003322 54.0
SYD3_k127_82995_0 Sterol carrier protein domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006373 321.0
SYD3_k127_82995_1 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001804 258.0
SYD3_k127_82995_2 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.000000000000000000000000000000000000000000001802 184.0
SYD3_k127_82995_3 Cytochrome oxidase assembly protein K02259 - - 0.000000000000000000007063 107.0
SYD3_k127_82995_4 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0030312,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.000000000000009607 87.0
SYD3_k127_82995_5 Major facilitator superfamily - - - 0.0000004108 57.0
SYD3_k127_8304073_0 secondary active sulfate transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004358 519.0
SYD3_k127_8304073_1 AICARFT/IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000006819 134.0
SYD3_k127_8327167_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005619 287.0
SYD3_k127_8327167_1 - - - - 0.000000000000000000000000000000001739 134.0
SYD3_k127_8327167_2 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000002018 121.0
SYD3_k127_8327167_3 Cytidylate kinase-like family - - - 0.0000000000000000002645 96.0
SYD3_k127_8327167_4 DinB family - - - 0.00000000000002491 80.0
SYD3_k127_8336156_0 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009677 445.0
SYD3_k127_8336156_1 Alpha galactosidase A K07407 - 3.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000002796 225.0
SYD3_k127_8340610_0 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 344.0
SYD3_k127_8340610_1 - - - - 0.000000000000000004714 93.0
SYD3_k127_8345275_0 Belongs to the ATCase OTCase family K09065,K13043 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 0.0000000000000000000000000000000000000000000000000000007097 199.0
SYD3_k127_8345275_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000001982 139.0
SYD3_k127_8381525_0 Belongs to the heme-copper respiratory oxidase family K15862 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000192 275.0
SYD3_k127_8381525_1 N-terminal domain of cytochrome oxidase-cbb3, FixP K00406 - - 0.000000000000000000000000000003602 130.0
SYD3_k127_8381525_2 Cbb3-type cytochrome oxidase K00407 - - 0.00008391 54.0
SYD3_k127_8382490_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 1.954e-260 824.0
SYD3_k127_8382490_1 TIGRFAM methylmalonyl-CoA mutase, large subunit K01848 - 5.4.99.2 5.03e-222 703.0
SYD3_k127_8382490_10 tRNA synthetases class I (C) catalytic domain K01883,K15526 GO:0000166,GO:0001871,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030246,GO:0030247,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065 6.1.1.16,6.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009319 396.0
SYD3_k127_8382490_11 ABC transporter K05847 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 393.0
SYD3_k127_8382490_12 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 374.0
SYD3_k127_8382490_13 Exporter of polyketide antibiotics K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 369.0
SYD3_k127_8382490_14 TIGRFAM RNA polymerase sigma-54 factor, RpoN K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005042 352.0
SYD3_k127_8382490_15 Helix-hairpin-helix class 2 (Pol1 family) motifs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 338.0
SYD3_k127_8382490_16 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005679 335.0
SYD3_k127_8382490_17 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 344.0
SYD3_k127_8382490_18 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 321.0
SYD3_k127_8382490_19 Belongs to the peptidase M16 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 332.0
SYD3_k127_8382490_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 570.0
SYD3_k127_8382490_20 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003724 286.0
SYD3_k127_8382490_21 TIGRFAM LAO AO transport system ATPase K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002447 276.0
SYD3_k127_8382490_22 GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000001143 259.0
SYD3_k127_8382490_23 DRTGG domain K06873 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009714 262.0
SYD3_k127_8382490_24 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000056 252.0
SYD3_k127_8382490_25 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000007063 246.0
SYD3_k127_8382490_26 Phosphotriesterase family K07048 - - 0.0000000000000000000000000000000000000000000000000000000000000000008729 241.0
SYD3_k127_8382490_27 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000008597 234.0
SYD3_k127_8382490_28 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000001615 228.0
SYD3_k127_8382490_29 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000003304 226.0
SYD3_k127_8382490_3 Acyl-CoA dehydrogenase, C-terminal domain K16173 - 1.3.99.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009044 539.0
SYD3_k127_8382490_30 Iron permease FTR1 K07243 - - 0.00000000000000000000000000000000000000000000000000000000002435 217.0
SYD3_k127_8382490_31 transport K05845,K05846 - - 0.00000000000000000000000000000000000000000000000000000001981 205.0
SYD3_k127_8382490_32 Protein of unknown function (DUF1684) K09164 - - 0.0000000000000000000000000000000000000000000000000000002379 201.0
SYD3_k127_8382490_33 PFAM HhH-GPD family protein - - - 0.00000000000000000000000000000000000000000000000000001271 198.0
SYD3_k127_8382490_34 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000001573 197.0
SYD3_k127_8382490_35 methylmalonyl-CoA mutase C-terminal K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000891 186.0
SYD3_k127_8382490_36 Binding-protein-dependent transport system inner membrane component K05846 - - 0.000000000000000000000000000000000000000000000001768 190.0
SYD3_k127_8382490_37 Substrate binding domain of ABC-type glycine betaine transport system K05845 - - 0.00000000000000000000000000000000000000000002831 175.0
SYD3_k127_8382490_38 protein flavinylation K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000005249 177.0
SYD3_k127_8382490_39 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000003528 141.0
SYD3_k127_8382490_4 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005731 509.0
SYD3_k127_8382490_40 Tachylectin - - - 0.0000000000000000000000000000001209 139.0
SYD3_k127_8382490_41 Ferric reductase like transmembrane component K17247 - - 0.0000000000000000000000000000001964 135.0
SYD3_k127_8382490_42 regulation of RNA biosynthetic process - - - 0.0000000000000000000000000002817 119.0
SYD3_k127_8382490_43 phosphoglycerate mutase K02226,K22316 GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005488,GO:0006139,GO:0006401,GO:0006725,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016891,GO:0016893,GO:0017144,GO:0018130,GO:0019438,GO:0019439,GO:0032296,GO:0033013,GO:0033014,GO:0034641,GO:0034655,GO:0042364,GO:0042578,GO:0043170,GO:0043755,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046700,GO:0051186,GO:0051188,GO:0071667,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 3.1.26.4,3.1.3.73 0.00000000000000000000000172 111.0
SYD3_k127_8382490_44 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000002216 108.0
SYD3_k127_8382490_45 Dodecin - - - 0.00000000000000000002752 92.0
SYD3_k127_8382490_46 Protein of unknown function (DUF3494) - - - 0.0000000000000000003451 103.0
SYD3_k127_8382490_47 - - - - 0.0000000000000001035 85.0
SYD3_k127_8382490_48 Rhomboid family K19225 - 3.4.21.105 0.000000000000623 73.0
SYD3_k127_8382490_49 TPM domain K06872 - - 0.000000000212 74.0
SYD3_k127_8382490_5 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 487.0
SYD3_k127_8382490_50 - - - - 0.00001139 54.0
SYD3_k127_8382490_51 - - - - 0.00001197 58.0
SYD3_k127_8382490_52 WD40-like Beta Propeller Repeat K03641 - - 0.0002252 54.0
SYD3_k127_8382490_6 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 439.0
SYD3_k127_8382490_7 Helix-hairpin-helix domain K04477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003992 435.0
SYD3_k127_8382490_8 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000691 422.0
SYD3_k127_8382490_9 Acyl-CoA dehydrogenase, N-terminal domain K00248,K00249 - 1.3.8.1,1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 404.0
SYD3_k127_8421989_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 7.05e-298 934.0
SYD3_k127_8421989_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006071 411.0
SYD3_k127_8421989_2 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000007987 244.0
SYD3_k127_8421989_3 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000001775 173.0
SYD3_k127_8426937_0 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 2.143e-214 700.0
SYD3_k127_8426937_1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335,K18331 - 1.12.1.3,1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005164 357.0
SYD3_k127_8434744_0 SMART Metal-dependent phosphohydrolase, HD region K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 413.0
SYD3_k127_8434744_1 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 439.0
SYD3_k127_8434744_10 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001929 228.0
SYD3_k127_8434744_11 TrkA-C domain K03499 - - 0.000000000000000000000000000000000000000000000000000000000000006739 222.0
SYD3_k127_8434744_12 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000002125 166.0
SYD3_k127_8434744_13 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000001471 167.0
SYD3_k127_8434744_14 Cytidylate kinase-like family K00760 - 2.4.2.8 0.000000000000000000000000000000000003378 141.0
SYD3_k127_8434744_15 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000002595 140.0
SYD3_k127_8434744_16 NYN domain - - - 0.00000000000000000000000000000000003036 151.0
SYD3_k127_8434744_17 TrkA-N domain K03499,K10716 - - 0.0000000000000000000000000000000001054 141.0
SYD3_k127_8434744_18 PFAM Diacylglycerol kinase, catalytic - - - 0.000000000000000000000000000000007562 140.0
SYD3_k127_8434744_19 DNA polymerase III subunit delta K02341 - 2.7.7.7 0.000000000000000000007483 108.0
SYD3_k127_8434744_2 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032 374.0
SYD3_k127_8434744_20 Universal stress protein family - - - 0.0000000000000000003581 93.0
SYD3_k127_8434744_21 helix_turn_helix, mercury resistance K13640 - - 0.00000000000000009208 88.0
SYD3_k127_8434744_22 Acylphosphatase K01512 - 3.6.1.7 0.00000000000004664 79.0
SYD3_k127_8434744_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 359.0
SYD3_k127_8434744_4 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 344.0
SYD3_k127_8434744_5 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 312.0
SYD3_k127_8434744_6 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007617 301.0
SYD3_k127_8434744_7 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000312 266.0
SYD3_k127_8434744_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000002033 246.0
SYD3_k127_8434744_9 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000003093 237.0
SYD3_k127_8486469_0 ABC transporter - - - 1.36e-208 654.0
SYD3_k127_8486469_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006612 452.0
SYD3_k127_8486469_2 PFAM FAD linked oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007559 447.0
SYD3_k127_8486469_3 XdhC Rossmann domain K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001234 260.0
SYD3_k127_8486469_4 3-oxoacyl-[acyl-carrier-protein] synthase activity K09458 - 2.3.1.179 0.000000000000000000000000003996 114.0
SYD3_k127_8519144_0 HAMP domain K19694 - - 0.0000000000000000000001128 101.0
SYD3_k127_8519144_1 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.0000000009616 64.0
SYD3_k127_8519144_2 Helix-turn-helix XRE-family like proteins - - - 0.0000000603 65.0
SYD3_k127_8569909_0 Cell division protein FtsA K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005372 447.0
SYD3_k127_8569909_1 Belongs to the FPG family K05522 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000002302 252.0
SYD3_k127_8569909_2 PFAM conserved K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000002062 241.0
SYD3_k127_8569909_3 PHP domain protein K07053 - 3.1.3.97 0.000000000000000000000000000000000000001193 159.0
SYD3_k127_8569909_4 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000001936 130.0
SYD3_k127_8569909_5 Domain of unknown function (DUF1905) - - - 0.00000000000000000006785 94.0
SYD3_k127_8689207_0 transport, permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 309.0
SYD3_k127_8689207_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000002921 81.0
SYD3_k127_8730230_0 PFAM Cys Met metabolism pyridoxal-phosphate-dependent protein K01758,K01761 - 4.4.1.1,4.4.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005704 316.0
SYD3_k127_8730230_1 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005105 304.0
SYD3_k127_8730230_10 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00001309 58.0
SYD3_k127_8730230_2 Glycosyltransferase, group 4 family K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000001333 240.0
SYD3_k127_8730230_3 cell envelope-related transcriptional attenuator - - - 0.00000000000000000000000000000000000002028 161.0
SYD3_k127_8730230_4 diguanylate cyclase - - - 0.000000000000000000000000000000000003744 155.0
SYD3_k127_8730230_5 DinB superfamily - - - 0.000000000000000000000000000000000006328 144.0
SYD3_k127_8730230_6 Protein of unknown function (DUF3048) C-terminal domain - - - 0.000000000000000000000000000002921 134.0
SYD3_k127_8730230_7 TRANSCRIPTIONal - - - 0.0000000000000000000000000001039 132.0
SYD3_k127_8730230_8 ResB-like family - - - 0.000000000000008837 87.0
SYD3_k127_8730230_9 Glycosyltransferase, group 1 family protein - - - 0.000001312 55.0
SYD3_k127_8738894_0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009896 578.0
SYD3_k127_8738894_1 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 486.0
SYD3_k127_8738894_2 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005358 342.0
SYD3_k127_8738894_3 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000302 154.0
SYD3_k127_875943_0 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism K01488 GO:0003674,GO:0003824,GO:0004000,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006144,GO:0006152,GO:0006154,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009113,GO:0009116,GO:0009119,GO:0009163,GO:0009164,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042278,GO:0042440,GO:0042451,GO:0042454,GO:0042455,GO:0042737,GO:0043094,GO:0043096,GO:0043101,GO:0043103,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046085,GO:0046100,GO:0046101,GO:0046102,GO:0046103,GO:0046112,GO:0046128,GO:0046129,GO:0046130,GO:0046148,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0072523,GO:1901135,GO:1901136,GO:1901137,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659 3.5.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004297 509.0
SYD3_k127_875943_1 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005481 523.0
SYD3_k127_875943_10 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004928 301.0
SYD3_k127_875943_11 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000008389 247.0
SYD3_k127_875943_12 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000002084 238.0
SYD3_k127_875943_13 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000002276 229.0
SYD3_k127_875943_14 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000000000007986 236.0
SYD3_k127_875943_15 adenosine 5'-monophosphoramidase activity - - - 0.000000000000000000000000000000000000000000000000000000000001443 218.0
SYD3_k127_875943_16 guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000001937 181.0
SYD3_k127_875943_17 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000001485 182.0
SYD3_k127_875943_18 aminopeptidase N - - - 0.00000000000000000000000000000000000000001311 175.0
SYD3_k127_875943_19 Domain of unknown function (DUF4173) - - - 0.00000000000000000000000000000000000000005436 169.0
SYD3_k127_875943_2 peptidase S9B dipeptidylpeptidase IV domain protein K01278 - 3.4.14.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 508.0
SYD3_k127_875943_20 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000003285 161.0
SYD3_k127_875943_21 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000004856 145.0
SYD3_k127_875943_22 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000004289 130.0
SYD3_k127_875943_23 SnoaL-like domain - - - 0.00000000000000000000000005255 124.0
SYD3_k127_875943_24 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000005135 122.0
SYD3_k127_875943_25 YCII-related domain - - - 0.0000000000000000000000126 106.0
SYD3_k127_875943_26 PFAM Acetyltransferase (GNAT) family - - - 0.000000000000000003222 99.0
SYD3_k127_875943_27 Ethyl tert-butyl ether degradation - - - 0.00000000000000002137 87.0
SYD3_k127_875943_28 Transcriptional regulator, arsR family - - - 0.00000000000000006062 83.0
SYD3_k127_875943_29 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000003499 88.0
SYD3_k127_875943_3 F420-dependent oxidoreductase, G6PDH family K15510 - 1.1.98.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 485.0
SYD3_k127_875943_30 Uncharacterized conserved protein (DUF2277) - - - 0.000000000000002984 83.0
SYD3_k127_875943_31 - K22014 - - 0.0000000000000729 75.0
SYD3_k127_875943_32 cellular response to heat K09807 - - 0.00000000001285 76.0
SYD3_k127_875943_33 PFAM 4Fe-4S K00176 - 1.2.7.3 0.0000000000737 66.0
SYD3_k127_875943_34 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00177 - 1.2.7.3 0.0000000265 67.0
SYD3_k127_875943_35 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.00001548 57.0
SYD3_k127_875943_36 PFAM Pyridoxamine 5'-phosphate - - - 0.00008558 47.0
SYD3_k127_875943_37 Acetyltransferase (GNAT) domain - - - 0.0001092 55.0
SYD3_k127_875943_4 Belongs to the sigma-70 factor family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 451.0
SYD3_k127_875943_5 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005229 411.0
SYD3_k127_875943_6 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 402.0
SYD3_k127_875943_7 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 345.0
SYD3_k127_875943_8 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008533 331.0
SYD3_k127_875943_9 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 311.0
SYD3_k127_8780046_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004653 589.0
SYD3_k127_8780046_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001838 456.0
SYD3_k127_8780046_10 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000293 209.0
SYD3_k127_8780046_11 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000001617 205.0
SYD3_k127_8780046_12 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000001543 188.0
SYD3_k127_8780046_13 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000002395 164.0
SYD3_k127_8780046_14 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000007781 147.0
SYD3_k127_8780046_15 nUDIX hydrolase K01515,K03574,K19710 - 2.7.7.53,3.6.1.13,3.6.1.55 0.00000000000000000000000000000003981 130.0
SYD3_k127_8780046_16 YGGT family K02221 - - 0.0000000000005427 75.0
SYD3_k127_8780046_17 DUF167 K09131 - - 0.0000002337 63.0
SYD3_k127_8780046_2 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007203 448.0
SYD3_k127_8780046_3 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007779 426.0
SYD3_k127_8780046_4 Belongs to the ABC transporter superfamily K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004659 416.0
SYD3_k127_8780046_5 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 394.0
SYD3_k127_8780046_6 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005535 349.0
SYD3_k127_8780046_7 Binding-protein-dependent transport system inner membrane component K15581 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005662 314.0
SYD3_k127_8780046_8 N-terminal TM domain of oligopeptide transport permease C K15582 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 297.0
SYD3_k127_8780046_9 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000001591 263.0
SYD3_k127_883114_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 569.0
SYD3_k127_883114_1 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000000000000000000009712 234.0
SYD3_k127_883114_2 Putative cell wall binding repeat 2 - - - 0.00000000000000000000000000000000000000000000000005547 203.0
SYD3_k127_883114_3 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.0000000000000000000000000000000000003844 144.0
SYD3_k127_883114_4 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0045333,GO:0046459,GO:0047456,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:1901363 4.2.1.3 0.00000000000000000000000000000000009748 134.0
SYD3_k127_883114_5 Glycosyltransferase family 28 C-terminal domain - - - 0.00000000000000000001196 108.0
SYD3_k127_883114_6 FR47-like protein - - - 0.0000002274 63.0
SYD3_k127_8842974_0 FtsX-like permease family K02004 - - 7.649e-201 662.0
SYD3_k127_8842974_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004206 287.0
SYD3_k127_8842974_2 heme binding - - - 0.0000000000000000000000000000000000000426 146.0
SYD3_k127_8851311_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.66e-292 922.0
SYD3_k127_8851311_1 Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004801 469.0
SYD3_k127_8851311_10 Peptidase s1 and s6 chymotrypsin hap K18544,K18545 - 3.4.21.80,3.4.21.81 0.00000000001849 72.0
SYD3_k127_8851311_11 PFAM blue (type 1) copper domain protein K00368,K02638 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.2.1 0.0000002583 58.0
SYD3_k127_8851311_2 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000009249 171.0
SYD3_k127_8851311_3 ABC-type transport system involved in cytochrome c biogenesis permease component K02194 - - 0.00000000000000000000000000000000000000009944 169.0
SYD3_k127_8851311_4 Domain present in phytochromes and cGMP-specific phosphodiesterases. K08968 - 1.8.4.14 0.00000000000000000000000000000000000001139 156.0
SYD3_k127_8851311_5 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000002822 144.0
SYD3_k127_8851311_6 cytochrome C assembly protein K02195 - - 0.0000000000000000000000000000000006068 134.0
SYD3_k127_8851311_7 Belongs to the HesB IscA family K13628,K15724 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009061,GO:0009987,GO:0010467,GO:0015980,GO:0016020,GO:0016043,GO:0016226,GO:0019538,GO:0022607,GO:0031163,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0055114,GO:0071704,GO:0071840,GO:0071944,GO:1901564 - 0.0000000000000000000000000000008402 130.0
SYD3_k127_8851311_8 PFAM helix-turn-helix HxlR type - - - 0.0000000000000000000001072 102.0
SYD3_k127_8851311_9 Rieske [2Fe-2S] domain - - - 0.00000000000000000009448 100.0
SYD3_k127_8880004_0 Beta-eliminating lyase K01667 - 4.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004213 505.0
SYD3_k127_8880004_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 424.0
SYD3_k127_8880004_10 Peptidase family M23 - - - 0.0000000000000002797 90.0
SYD3_k127_8880004_11 ATPase activity - - - 0.00009794 52.0
SYD3_k127_8880004_2 ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000101 219.0
SYD3_k127_8880004_3 ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000005591 219.0
SYD3_k127_8880004_4 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000003377 192.0
SYD3_k127_8880004_5 endonuclease exonuclease phosphatase K07004 - - 0.000000000000000000000000000000000000000000000001768 190.0
SYD3_k127_8880004_6 UbiA prenyltransferase family K02548 GO:0000287,GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006766,GO:0006775,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009233,GO:0009234,GO:0009987,GO:0016020,GO:0016740,GO:0016765,GO:0032194,GO:0042180,GO:0042181,GO:0042362,GO:0042371,GO:0042373,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046428,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901576,GO:1901661,GO:1901663 2.5.1.74 0.0000000000000000000000000000000000000000000001123 191.0
SYD3_k127_8880004_7 Repeat of unknown function (DUF346) - - - 0.000000000000000000000000000000000000000003959 163.0
SYD3_k127_8880004_8 PFAM luciferase-like K00320 - 1.5.98.2 0.00000000000000000000000005442 125.0
SYD3_k127_8880004_9 CAAX protease self-immunity K07052 - - 0.000000000000000000000002264 114.0
SYD3_k127_8952401_0 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004665 392.0
SYD3_k127_8952401_1 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000003987 88.0
SYD3_k127_8996638_0 C4-dicarboxylate transmembrane transporter activity K03326 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004756 385.0
SYD3_k127_8996638_1 Glutaryl-7-ACA acylase K06978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002845 319.0
SYD3_k127_8996638_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000001353 248.0
SYD3_k127_8996638_3 - - - - 0.0000000000000000000003889 99.0
SYD3_k127_9010878_0 ERAP1-like C-terminal domain K01256,K01263 - 3.4.11.14,3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 556.0
SYD3_k127_903780_0 M61 glycyl aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000002691 209.0
SYD3_k127_9151160_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006598 297.0
SYD3_k127_9151160_1 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000005395 167.0
SYD3_k127_9183479_0 ATPase associated with various cellular K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 430.0
SYD3_k127_9183479_1 Cell cycle protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000688 333.0
SYD3_k127_9183479_2 Aminotransferase class-V K00436 - 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004676 309.0
SYD3_k127_9183479_3 PFAM penicillin-binding protein transpeptidase K05364 - - 0.0000000000000000000000000000000000000000000000000000000000000008465 240.0
SYD3_k127_9183479_4 PFAM transglutaminase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000009365 239.0
SYD3_k127_9183479_5 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000004845 223.0
SYD3_k127_9183479_6 phosphoglycerate mutase family K22305 - 3.1.3.3 0.000000000000000000000000000001952 137.0
SYD3_k127_9183479_7 PFAM Forkhead-associated protein - - - 0.000000000000000001655 91.0
SYD3_k127_9279922_0 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008792 482.0
SYD3_k127_9279922_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 403.0
SYD3_k127_9279922_2 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009064 316.0
SYD3_k127_9279922_3 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004452 319.0
SYD3_k127_9279922_4 exodeoxyribonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005432 281.0
SYD3_k127_9279922_5 Methylates ribosomal protein L11 K02687 - - 0.00000000000000000000000000000000000000000000000002977 199.0
SYD3_k127_9279922_6 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0017076,GO:0030234,GO:0030312,GO:0030554,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0036094,GO:0040007,GO:0042594,GO:0044464,GO:0050790,GO:0050896,GO:0051082,GO:0051716,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0071496,GO:0071944,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000006686 152.0
SYD3_k127_9279922_7 - - - - 0.00000000000000000000000000000000000008732 153.0
SYD3_k127_9279922_8 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.000000000000000000000000000000000003977 143.0
SYD3_k127_9279922_9 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000003075 87.0
SYD3_k127_928183_0 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 355.0
SYD3_k127_9286677_0 Fe-S oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 522.0
SYD3_k127_9286677_1 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 436.0
SYD3_k127_9286677_2 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007812 404.0
SYD3_k127_9286677_3 Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000000023 200.0
SYD3_k127_9286677_4 AsnC family K03718 - - 0.00000000000000000000000000000000000000000000000287 177.0
SYD3_k127_9286677_5 Electron transfer flavoprotein K03522 - - 0.0000000000000000000000000000000000000000000000301 182.0
SYD3_k127_9286677_6 nitrite reductase [NAD(P)H] activity - - - 0.00000000000000000000000000000000000000000001191 173.0
SYD3_k127_9288497_0 PFAM Glycosyl transferase, family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 610.0
SYD3_k127_9288497_1 Two component, sigma54 specific, transcriptional regulator, Fis family K07712,K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007395 363.0
SYD3_k127_9288497_2 beta-lactamase domain protein K13075 - 3.1.1.81 0.000000000000000000000000000000000000000000000000000000000001562 218.0
SYD3_k127_9288497_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000002488 196.0
SYD3_k127_9288497_4 YGGT family - - - 0.000001647 56.0
SYD3_k127_9392311_0 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001098 251.0
SYD3_k127_9392311_1 succinate dehydrogenase or fumarate reductase, flavoprotein K00239 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000009738 124.0
SYD3_k127_9399046_0 activity, protein serine threonine kinase activity, protein-tyrosine kinase activity, ATP binding, regulation of transcription, DNA-dependent, protein amino acid phosphorylation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 334.0
SYD3_k127_9399046_1 PIN domain - - - 0.00000001178 65.0
SYD3_k127_9399046_2 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000001064 52.0
SYD3_k127_9524131_0 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 288.0
SYD3_k127_9524131_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000009377 224.0
SYD3_k127_9548185_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 329.0
SYD3_k127_9548185_1 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000000000000000000000000000000000000003144 194.0
SYD3_k127_9548185_2 RNA-binding protein K07574 - - 0.0000000000000000000000000000000000000000007893 158.0
SYD3_k127_9548185_3 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000001584 87.0
SYD3_k127_9553006_0 PFAM homogentisate 12-dioxygenase K00451 - 1.13.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 432.0
SYD3_k127_9553006_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000004345 85.0
SYD3_k127_9553006_2 Transcriptional regulatory protein, C terminal K07669,K07672 - - 0.00000000000006713 79.0
SYD3_k127_9568649_0 Cytochrome b K03891 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 375.0
SYD3_k127_9629114_0 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 1.465e-245 764.0
SYD3_k127_9629114_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 GO:0003674,GO:0003824,GO:0004333,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0030312,GO:0040007,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0055114,GO:0071704,GO:0071944,GO:0072350 4.2.1.2 9.457e-234 731.0
SYD3_k127_9629114_10 L-threonine 3-dehydrogenase K00060 - 1.1.1.103 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003771 359.0
SYD3_k127_9629114_11 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 293.0
SYD3_k127_9629114_12 NADH ubiquinone oxidoreductase, 20 Kd subunit K14128 - 1.8.98.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001129 283.0
SYD3_k127_9629114_13 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K16164 - 3.7.1.5 0.00000000000000000000000000000000000000000000000000000000000000000003155 242.0
SYD3_k127_9629114_14 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000001537 244.0
SYD3_k127_9629114_15 Two component transcriptional regulator, LuxR family - - - 0.000000000000000000000000000000000000000000000000000000000000001088 225.0
SYD3_k127_9629114_16 Integral membrane sensor signal transduction histidine kinase K07680,K07778,K11617,K14988 - 2.7.13.3 0.000000000000000000000000000000000000000000000000009213 200.0
SYD3_k127_9629114_17 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.00000000000000000000000000000000000000000002835 165.0
SYD3_k127_9629114_18 Peptidase S16, lon domain protein K01338,K07157 - 3.4.21.53 0.0000000000000000000000000000007912 131.0
SYD3_k127_9629114_19 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000008863 110.0
SYD3_k127_9629114_2 Belongs to the aldehyde dehydrogenase family K22187 - - 4.227e-204 649.0
SYD3_k127_9629114_20 Domain of unknown function DUF11 K20276 - - 0.000000000000000001371 99.0
SYD3_k127_9629114_21 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000003076 92.0
SYD3_k127_9629114_22 Domain of unknown function (DUF309) K09763 - - 0.000000000000006395 86.0
SYD3_k127_9629114_23 ubiE/COQ5 methyltransferase family - - - 0.00000000000001563 86.0
SYD3_k127_9629114_24 DnaJ molecular chaperone homology domain K05516 - - 0.0000009415 57.0
SYD3_k127_9629114_25 Tfp pilus assembly protein FimV - - - 0.00004089 55.0
SYD3_k127_9629114_26 Hydrogenase maturation protease - - - 0.00007141 55.0
SYD3_k127_9629114_27 n-acetylmuramoyl-L-alanine amidase K01447 - 3.5.1.28 0.0004873 52.0
SYD3_k127_9629114_3 Aldehyde dehydrogenase family K00294 - 1.2.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009545 557.0
SYD3_k127_9629114_4 Cys/Met metabolism PLP-dependent enzyme K00639 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0008890,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000807 527.0
SYD3_k127_9629114_5 CobW/HypB/UreG, nucleotide-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006125 532.0
SYD3_k127_9629114_6 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000672 499.0
SYD3_k127_9629114_7 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00596,K00823 - 2.6.1.19,4.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005777 470.0
SYD3_k127_9629114_8 Nickel-dependent hydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006105 448.0
SYD3_k127_9629114_9 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008679 434.0
SYD3_k127_9635016_0 PFAM Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 4.579e-212 672.0
SYD3_k127_9635016_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003955 602.0
SYD3_k127_9635016_10 Belongs to the SOS response-associated peptidase family - - - 0.00000000000000000000000000000000000000000000000000294 192.0
SYD3_k127_9635016_11 Thioesterase superfamily - - - 0.00000000000000000000000000000000000003383 156.0
SYD3_k127_9635016_12 AAA domain K01090 - 3.1.3.16 0.00000000000000000000000000000002932 139.0
SYD3_k127_9635016_13 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.000000000000000000000000000003351 134.0
SYD3_k127_9635016_14 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000005052 117.0
SYD3_k127_9635016_15 Rieske 2Fe-2S - - - 0.000000000000000000000002793 113.0
SYD3_k127_9635016_16 coenzyme F420-1:gamma-L-glutamate ligase activity - - - 0.000000000000000000001798 100.0
SYD3_k127_9635016_17 DinB superfamily - - - 0.00000000000000004007 88.0
SYD3_k127_9635016_18 TfoX N-terminal domain - - - 0.000000000000003192 88.0
SYD3_k127_9635016_19 CBS domain - - - 0.00000000000004383 79.0
SYD3_k127_9635016_2 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004409 458.0
SYD3_k127_9635016_20 DoxX K16937 - 1.8.5.2 0.00000000000009936 78.0
SYD3_k127_9635016_21 GyrI-like small molecule binding domain - - - 0.0000000000531 75.0
SYD3_k127_9635016_3 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 454.0
SYD3_k127_9635016_4 CorA-like Mg2+ transporter protein K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005199 392.0
SYD3_k127_9635016_5 Multicopper oxidase K22348 - 1.16.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007476 391.0
SYD3_k127_9635016_6 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002719 319.0
SYD3_k127_9635016_7 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 323.0
SYD3_k127_9635016_8 SMART ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005817 306.0
SYD3_k127_9635016_9 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001812 271.0
SYD3_k127_9643471_0 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 399.0
SYD3_k127_9643471_1 PspA/IM30 family K03969 - - 0.0000000000000000000000000000000000000000000000000000000000000000001374 236.0
SYD3_k127_9643471_2 permease - - - 0.000000000000000000000000000000000000000000000000000000005401 213.0
SYD3_k127_9643471_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K19340 - - 0.00000000000000000000000005001 119.0
SYD3_k127_9643471_4 DALR_2 K01883 - 6.1.1.16 0.000000000000000034 82.0
SYD3_k127_9649350_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 3.395e-253 788.0
SYD3_k127_9649350_1 Phosphate starvation-inducible protein PhoH K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005604 482.0
SYD3_k127_9649350_2 transglycosylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003664 342.0
SYD3_k127_9649350_3 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000001966 140.0
SYD3_k127_9651364_0 Alcohol dehydrogenase zinc-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 396.0
SYD3_k127_9651364_1 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 396.0
SYD3_k127_9651364_2 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000633 249.0
SYD3_k127_9663632_0 Pyruvate:ferredoxin oxidoreductase core domain II K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000001142 268.0
SYD3_k127_9663632_1 menaquinone-dependent protoporphyrinogen oxidase activity K00230 - 1.3.5.3 0.0000000000000000000000000000000002908 144.0
SYD3_k127_9663632_2 RDD family - - - 0.0000000000000000000003141 105.0
SYD3_k127_9664089_0 PFAM Pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007421 411.0
SYD3_k127_9664089_1 PFAM glycoside hydrolase, family 3 domain protein K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 333.0
SYD3_k127_9664089_10 Domain of unknown function (DUF4342) - - - 0.0000000000000000000001394 100.0
SYD3_k127_9664089_11 - - - - 0.0000000000000000000001651 110.0
SYD3_k127_9664089_12 4Fe-4S binding domain K00176 - 1.2.7.3 0.000000000000000001156 90.0
SYD3_k127_9664089_13 Permeases of the drug metabolite transporter DMT superfamily K15269 - - 0.00000007761 64.0
SYD3_k127_9664089_14 VIT family - - - 0.000001364 57.0
SYD3_k127_9664089_2 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 321.0
SYD3_k127_9664089_3 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008264 306.0
SYD3_k127_9664089_4 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002225 282.0
SYD3_k127_9664089_5 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000002131 242.0
SYD3_k127_9664089_6 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000001614 214.0
SYD3_k127_9664089_7 PFAM Pyruvate ketoisovalerate oxidoreductase K00177 - 1.2.7.3 0.000000000000000000000000000000000005345 149.0
SYD3_k127_9664089_8 Methyltransferase - - - 0.000000000000000000000000000000005901 143.0
SYD3_k127_9664089_9 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000008568 137.0
SYD3_k127_9676368_0 RNA polymerase sigma factor K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000546 467.0
SYD3_k127_9676368_1 VIT family - - - 0.00000000000000000000000000000000004004 138.0
SYD3_k127_9676368_2 AP2 domain - - - 0.0002916 46.0
SYD3_k127_9740854_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003408 401.0
SYD3_k127_9740854_1 Acetyltransferase (GNAT) family - - - 0.000000000002034 71.0
SYD3_k127_9760331_0 Cytochrome c K07243 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007887 309.0
SYD3_k127_9760331_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000001002 236.0
SYD3_k127_9760331_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000001692 159.0
SYD3_k127_9760331_3 phosphorelay signal transduction system K12132 - 2.7.11.1 0.0003341 44.0
SYD3_k127_9762422_0 Fumarase C C-terminus K01744 - 4.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 516.0
SYD3_k127_9762422_1 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000001944 62.0
SYD3_k127_9768123_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 349.0
SYD3_k127_9768123_1 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000003528 126.0
SYD3_k127_9794210_0 Domain of unknown function (DUF4162) K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008355 251.0
SYD3_k127_9794210_1 Phospholipase_D-nuclease N-terminal - - - 0.000000001918 64.0
SYD3_k127_9796831_0 Cbs domain - - - 0.000000000001954 72.0
SYD3_k127_9796831_1 Uncharacterized conserved protein (DUF2267) - - - 0.00000002188 61.0
SYD3_k127_9796831_2 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.00000002593 66.0
SYD3_k127_9796831_3 Belongs to the RtcB family K14415 - 6.5.1.3 0.00000003669 55.0
SYD3_k127_9808287_0 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0000000000000000000000000000003397 131.0
SYD3_k127_9808287_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.00000000001629 64.0
SYD3_k127_9808287_2 Domain of unknown function (DUF3459) K01236 - 3.2.1.141 0.00000009682 56.0
SYD3_k127_9810032_0 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000107 191.0
SYD3_k127_9810032_1 belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000001049 130.0
SYD3_k127_9810032_2 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.000000000000000000000000002759 112.0
SYD3_k127_9810032_3 Transcriptional regulator, arsR family - - - 0.0000000003024 72.0
SYD3_k127_9812450_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 596.0
SYD3_k127_9812450_1 Na+/H+ antiporter 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008418 602.0
SYD3_k127_9812450_10 methyltransferase K00573 - 2.1.1.77 0.000000000000000004156 96.0
SYD3_k127_9812450_11 Transcriptional regulator - - - 0.00000000000001077 80.0
SYD3_k127_9812450_12 DnaJ domain - - - 0.00000000216 68.0
SYD3_k127_9812450_13 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000008413 57.0
SYD3_k127_9812450_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 493.0
SYD3_k127_9812450_3 Aminotransferase K00812,K10907 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 455.0
SYD3_k127_9812450_4 TIGRFAM Na H antiporter, bacterial form K03316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009978 426.0
SYD3_k127_9812450_5 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000000000000000000000000000000000000004427 237.0
SYD3_k127_9812450_6 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000006663 193.0
SYD3_k127_9812450_7 response regulator K07684 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0090352,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903314,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000001097 152.0
SYD3_k127_9812450_8 lactoylglutathione lyase activity - - - 0.0000000000000000000000000454 121.0
SYD3_k127_9812450_9 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000005385 104.0
SYD3_k127_9819377_0 metal-dependent phosphohydrolase, HD sub domain K03698 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003199 256.0
SYD3_k127_9819377_1 Transport of potassium into the cell K03549 - - 0.0000000000000000000000000000001085 132.0
SYD3_k127_9819377_2 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.000000004585 63.0
SYD3_k127_9834720_0 Sugar (and other) transporter K07058 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 322.0
SYD3_k127_9834720_1 Domain of unknown function (DUF4142) K08995 - - 0.000000000000000000000000000001373 124.0
SYD3_k127_9838347_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006872 334.0
SYD3_k127_9851374_0 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004869 555.0
SYD3_k127_9851374_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005811 328.0
SYD3_k127_9851374_2 Amidohydrolase family K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004785 278.0
SYD3_k127_9851374_3 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000002896 272.0
SYD3_k127_9851374_4 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000001213 220.0
SYD3_k127_9851374_5 Domain of unknown function (DUF4395) - - - 0.00000000001181 74.0
SYD3_k127_9851374_6 Transcriptional regulator - - - 0.00000000004563 73.0
SYD3_k127_9875462_0 DNA primase, small subunit K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 595.0
SYD3_k127_9875462_1 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 334.0
SYD3_k127_9875462_2 protein homotetramerization - - - 0.000000000000000000000000000000000000000000000000000000000000000000006488 238.0
SYD3_k127_9875462_3 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.0000000000000000000000000000000000000000000000005306 188.0
SYD3_k127_9875462_4 SMART Peptidoglycan-binding LysM - - - 0.0000000000000000000000000007343 129.0
SYD3_k127_9875462_5 Belongs to the UPF0761 family K07058 - - 0.00000000000000001802 98.0
SYD3_k127_9945886_0 Non-ribosomal peptide synthetase modules and related proteins K04780 - - 3.024e-305 966.0
SYD3_k127_997419_0 elongation factor G K02355 - - 1.093e-195 632.0
SYD3_k127_997419_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004686 583.0
SYD3_k127_997419_10 Ribosomal protein L35 K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000004622 75.0
SYD3_k127_997419_11 PFAM Colicin V production protein K03558 - - 0.0000003481 59.0
SYD3_k127_997419_12 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K06996 - - 0.0001043 51.0
SYD3_k127_997419_2 tRNA synthetases class I (W and Y) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0030312,GO:0034641,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 555.0
SYD3_k127_997419_3 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 520.0
SYD3_k127_997419_4 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 483.0
SYD3_k127_997419_5 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007238 346.0
SYD3_k127_997419_6 PFAM glycosyl transferase, family 51 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 355.0
SYD3_k127_997419_7 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000007617 197.0
SYD3_k127_997419_8 Belongs to the DNA glycosylase MPG family K03652 GO:0003674,GO:0003824,GO:0003905,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.2.2.21 0.0000000000000000000000000000000000000000001689 175.0
SYD3_k127_997419_9 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000004151 144.0
SYD3_k127_99943_0 belongs to the sigma-70 factor family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001595 259.0