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Overview

ID MAG03805
Name SYD3_bin.6
Sample SMP0096
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Terriglobia
Order Terriglobales
Family Korobacteraceae
Genus
Species
Assembly information
Completeness (%) 76.4
Contamination (%) 0.39
GC content (%) 57.0
N50 (bp) 9,555
Genome size (bp) 2,906,276

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2630

Gene name Description KEGG GOs EC E-value Score Sequence
SYD3_k127_10119140_0 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 1.093e-199 628.0
SYD3_k127_10119140_1 PFAM deoxyribose-phosphate aldolase phospho-2-dehydro-3-deoxyheptonate aldolase K01635 - 4.1.2.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006922 566.0
SYD3_k127_10119140_2 PFAM Uncharacterised conserved protein UCP033563 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005773 455.0
SYD3_k127_10119140_3 von Willebrand factor, type A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 449.0
SYD3_k127_10119140_4 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 381.0
SYD3_k127_10119140_5 CotH kinase protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 371.0
SYD3_k127_10119140_6 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000091 224.0
SYD3_k127_10119140_7 von Willebrand factor (vWF) type A domain - - - 0.00000000002778 76.0
SYD3_k127_10119140_8 von Willebrand factor, type A - - - 0.000000001663 70.0
SYD3_k127_10129725_0 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.0 1704.0
SYD3_k127_10129725_1 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 1.082e-302 934.0
SYD3_k127_10129725_2 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000000000000000000000454 181.0
SYD3_k127_10129725_3 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000001089 164.0
SYD3_k127_10129725_4 - - - - 0.00000000000000000000000000001734 118.0
SYD3_k127_10129725_6 - - - - 0.0004226 45.0
SYD3_k127_10177050_0 Glycosyl transferase, family 2 K01002,K20534 - 2.7.8.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 556.0
SYD3_k127_10177050_1 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.000000000000000000000000000000000000000000000000000000000000000001638 229.0
SYD3_k127_10191187_0 FAD linked oxidases, C-terminal domain K06911 - - 0.0 1218.0
SYD3_k127_10191187_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000439 470.0
SYD3_k127_10191187_2 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007162 366.0
SYD3_k127_10207609_0 Ribosomal protein S1 K02945 - - 8.722e-315 974.0
SYD3_k127_10207609_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 3.146e-196 625.0
SYD3_k127_10207609_10 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity K13991 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009579,GO:0016020,GO:0034357,GO:0042716,GO:0042717,GO:0044424,GO:0044436,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000001203 252.0
SYD3_k127_10207609_11 Transfers the fatty acyl group on membrane lipoproteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001491 257.0
SYD3_k127_10207609_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000008925 221.0
SYD3_k127_10207609_13 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000001062 208.0
SYD3_k127_10207609_14 Diacylglycerol kinase catalytic domain (presumed) - - - 0.00000000000000000000000000000000000000000000000000000001093 207.0
SYD3_k127_10207609_15 Protein of unknown function (DUF1349) K09702 - - 0.000000000000000000000000000000000000000000000004318 183.0
SYD3_k127_10207609_16 - - - - 0.0000000000000000000000000000000000000001469 156.0
SYD3_k127_10207609_17 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000007276 147.0
SYD3_k127_10207609_18 Protein of unknown function (DUF3788) - - - 0.0000000000000000000000000000000000002654 145.0
SYD3_k127_10207609_2 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 612.0
SYD3_k127_10207609_20 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000006831 96.0
SYD3_k127_10207609_21 - K05826 - - 0.0000000000005584 70.0
SYD3_k127_10207609_3 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005533 616.0
SYD3_k127_10207609_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007046 533.0
SYD3_k127_10207609_5 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000868 394.0
SYD3_k127_10207609_6 Involved in the tonB-independent uptake of proteins K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 398.0
SYD3_k127_10207609_7 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 370.0
SYD3_k127_10207609_8 (Rhomboid) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 306.0
SYD3_k127_10207609_9 PFAM Histidine triad (HIT) protein K19710 - 2.7.7.53 0.0000000000000000000000000000000000000000000000000000000000000000000000009089 250.0
SYD3_k127_10221328_0 Cysteine-rich domain K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008613 471.0
SYD3_k127_10221328_1 Domain of unknown function (DUF3473) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 302.0
SYD3_k127_10221328_2 PEP-CTERM motif - - - 0.0000000000004848 78.0
SYD3_k127_10221328_3 FAD linked oxidases, C-terminal domain K11472 - - 0.0004584 47.0
SYD3_k127_10248590_0 Voltage gated chloride channel - - - 2.851e-255 800.0
SYD3_k127_10248590_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 4.403e-228 712.0
SYD3_k127_10248590_2 Prolyl oligopeptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001083 257.0
SYD3_k127_10248590_3 AIR carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006197 248.0
SYD3_k127_10248590_4 MarR family - - - 0.000000000000000000000000000000000000000000000004328 176.0
SYD3_k127_10248590_5 methylamine metabolic process K15977 - - 0.00000000000000000000000000000000000000146 152.0
SYD3_k127_10248590_6 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000000002986 151.0
SYD3_k127_10248590_7 Glutaredoxin - - - 0.000000000000000000000000000000000000006356 149.0
SYD3_k127_10248590_8 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000001434 87.0
SYD3_k127_10325205_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 1.5e-199 627.0
SYD3_k127_10325205_1 Regulates arginine biosynthesis genes K03402 - - 0.000000000000000000000000000000000000000000000000000000000000008163 218.0
SYD3_k127_10325205_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000004466 153.0
SYD3_k127_10398007_0 diguanylate cyclase K02030,K06950,K16923 - - 0.0 1129.0
SYD3_k127_10398007_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 464.0
SYD3_k127_10398007_2 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000002461 224.0
SYD3_k127_10398007_3 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000004369 138.0
SYD3_k127_10419604_0 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000007811 173.0
SYD3_k127_10419604_1 Redoxin K03564 - 1.11.1.15 0.0000000000003798 70.0
SYD3_k127_10419604_2 PFAM Diacylglycerol kinase, catalytic - - - 0.000000000002353 69.0
SYD3_k127_10419604_3 - - - - 0.0001198 51.0
SYD3_k127_10495860_0 TonB-dependent receptor - - - 2.203e-232 742.0
SYD3_k127_10495860_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005496 376.0
SYD3_k127_10495860_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 327.0
SYD3_k127_10495860_3 HEAT repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000749 263.0
SYD3_k127_10495860_4 PDZ DHR GLGF domain protein - - - 0.0000000000000000000000000000000000000000000000000000000004465 219.0
SYD3_k127_10496468_0 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 421.0
SYD3_k127_10496468_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 310.0
SYD3_k127_10496468_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004269 279.0
SYD3_k127_10496468_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.0000000000000000000000000000000000009529 141.0
SYD3_k127_10539501_0 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.000000000000000000000000001083 114.0
SYD3_k127_10539501_1 - - - - 0.000000000000000000000001047 107.0
SYD3_k127_10539501_2 BrnA antitoxin of type II toxin-antitoxin system - - - 0.0000000000000000009924 91.0
SYD3_k127_10577741_0 Hexapeptide repeat of succinyl-transferase K13018 - 2.3.1.201 4.834e-205 650.0
SYD3_k127_10577741_1 Asparagine synthase K01953 - 6.3.5.4 8.974e-202 648.0
SYD3_k127_10577741_10 Protein of unknown function (DUF1565) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006939 277.0
SYD3_k127_10577741_11 Polysaccharide biosynthesis/export protein K01991 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000177 267.0
SYD3_k127_10577741_12 Protein involved in cellulose biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002819 264.0
SYD3_k127_10577741_13 Protein of unknown function (DUF1565) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001009 273.0
SYD3_k127_10577741_14 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000005953 241.0
SYD3_k127_10577741_15 Pirin C-terminal cupin domain K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000001357 224.0
SYD3_k127_10577741_16 - - - - 0.000000000000000000000000000000000000000000000000000000000002178 234.0
SYD3_k127_10577741_17 Sugar transferases involved in lipopolysaccharide synthesis - - - 0.00000000000000000000000000000000000000000000000000000000006306 211.0
SYD3_k127_10577741_18 AAA domain K02450 - - 0.0000000000000000000000000000000004918 148.0
SYD3_k127_10577741_19 cellulase activity - - - 0.00000000000000000000002369 116.0
SYD3_k127_10577741_2 Polysaccharide biosynthesis protein CapD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003351 541.0
SYD3_k127_10577741_20 Gaf domain K03832 - - 0.0000000000002586 83.0
SYD3_k127_10577741_21 O-antigen ligase like membrane protein - - - 0.00000009361 64.0
SYD3_k127_10577741_3 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 490.0
SYD3_k127_10577741_4 G-rich domain on putative tyrosine kinase K08252,K13661,K16554 - 2.7.10.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 488.0
SYD3_k127_10577741_5 Belongs to the DegT DnrJ EryC1 family K13017 - 2.6.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007493 423.0
SYD3_k127_10577741_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004727 334.0
SYD3_k127_10577741_7 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000285 304.0
SYD3_k127_10577741_8 polysaccharide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005054 290.0
SYD3_k127_10577741_9 YceI-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005301 273.0
SYD3_k127_10587646_0 transposase K07492 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001669 273.0
SYD3_k127_10636567_0 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000001059 230.0
SYD3_k127_10636567_1 Bacterial transcriptional activator domain - - - 0.000000000000000000000000002086 131.0
SYD3_k127_10652782_0 PFAM peptidase M13 K01415 - 3.4.24.71 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002234 277.0
SYD3_k127_10652782_1 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000002011 262.0
SYD3_k127_10652782_2 PFAM Adenosine AMP deaminase K01488 - 3.5.4.4 0.0000000000000000000000000000000002553 139.0
SYD3_k127_1069846_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00666 - - 5.155e-231 725.0
SYD3_k127_1069846_1 - - - - 0.0000002931 52.0
SYD3_k127_10751455_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 455.0
SYD3_k127_10751455_1 Protein of unknown function (DUF3011) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 298.0
SYD3_k127_10751455_2 Glyoxalase-like domain - - - 0.00000000000000000000000000000000000000000005135 163.0
SYD3_k127_10751455_3 Cold shock protein K03704 - - 0.00000000000000000000000000000000002538 136.0
SYD3_k127_10751455_4 transmembrane transporter activity K13021 - - 0.000000000000000000948 88.0
SYD3_k127_10872326_0 DegT/DnrJ/EryC1/StrS aminotransferase family K13010 - 2.6.1.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 390.0
SYD3_k127_10872326_1 FR47-like protein K16704 - 2.3.1.210 0.000000000001691 76.0
SYD3_k127_112671_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 3.905e-279 868.0
SYD3_k127_1142732_0 ASPIC and UnbV - - - 6.222e-290 900.0
SYD3_k127_1142732_1 Cytochrome c554 and c-prime - - - 2.23e-267 835.0
SYD3_k127_1142732_2 ASPIC and UnbV - - - 3.089e-264 823.0
SYD3_k127_1142732_3 Carboxypeptidase regulatory-like domain - - - 1.198e-215 692.0
SYD3_k127_1142732_4 Glycogen debranching enzyme - - - 9.389e-210 681.0
SYD3_k127_1142732_5 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 441.0
SYD3_k127_1144603_0 G-rich domain on putative tyrosine kinase K08252,K16554 - 2.7.10.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 573.0
SYD3_k127_1144603_1 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006491 375.0
SYD3_k127_1144603_10 lipopolysaccharide metabolic process K08309,K19804 - - 0.0000000000000000000000000000000000000000000000000008543 199.0
SYD3_k127_1144603_11 Sporulation and spore germination - - - 0.0000000000000000000000000000000000000000000000000482 191.0
SYD3_k127_1144603_12 NAD dependent epimerase/dehydratase family - - - 0.00000000000000000000000000000000000000000000002187 178.0
SYD3_k127_1144603_13 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000601 175.0
SYD3_k127_1144603_14 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000001781 173.0
SYD3_k127_1144603_15 Uncharacterised nucleotidyltransferase - - - 0.00000000000000000000000000000000000017 156.0
SYD3_k127_1144603_16 PFAM ABC transporter K01990 - - 0.000000000000000000000000000000000003906 152.0
SYD3_k127_1144603_17 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion - - - 0.000000000000000000000000003048 124.0
SYD3_k127_1144603_18 Acid phosphatase - GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000000000000000000000000008502 119.0
SYD3_k127_1144603_2 pfkB family carbohydrate kinase K00847 - 2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 307.0
SYD3_k127_1144603_20 PFAM Glycosyl transferases group 1 K19002 - 2.4.1.337 0.00000000000000002581 94.0
SYD3_k127_1144603_21 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.000000000001178 71.0
SYD3_k127_1144603_22 Transglutaminase-like superfamily - - - 0.000000004491 63.0
SYD3_k127_1144603_23 ABC-2 type transporter K01992 - - 0.0000001813 63.0
SYD3_k127_1144603_3 Protein of unknown function, DUF255 K06888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003924 295.0
SYD3_k127_1144603_4 -O-antigen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009536 254.0
SYD3_k127_1144603_5 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001621 250.0
SYD3_k127_1144603_6 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000004382 230.0
SYD3_k127_1144603_8 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000006537 215.0
SYD3_k127_1144603_9 PFAM polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000002988 216.0
SYD3_k127_1145643_0 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000001447 196.0
SYD3_k127_115278_0 signal transduction histidine kinase - - - 2.323e-266 841.0
SYD3_k127_115278_1 Two component, sigma54 specific, transcriptional regulator, Fis family K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 447.0
SYD3_k127_115918_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 3.559e-260 842.0
SYD3_k127_115918_1 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004425 353.0
SYD3_k127_115918_10 Sel1 domain protein repeat-containing protein K07126 - - 0.0000000000000000001515 98.0
SYD3_k127_115918_2 FRG - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 340.0
SYD3_k127_115918_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006929 284.0
SYD3_k127_115918_4 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002215 270.0
SYD3_k127_115918_5 binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000000000000000000000000000001178 215.0
SYD3_k127_115918_6 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000000000000000000000000000005974 185.0
SYD3_k127_115918_7 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.000000000000000000000000000000000000001005 151.0
SYD3_k127_115918_8 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000005056 130.0
SYD3_k127_115918_9 - - - - 0.000000000000000000001444 102.0
SYD3_k127_1165627_0 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004667 355.0
SYD3_k127_1165627_1 NADH ubiquinone oxidoreductase, 20 Kd subunit K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 336.0
SYD3_k127_1165627_2 CDP-alcohol phosphatidyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005567 251.0
SYD3_k127_1165627_3 PFAM Alpha beta hydrolase K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000001909 190.0
SYD3_k127_1165627_4 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000009431 189.0
SYD3_k127_1165627_5 Squalene--hopene cyclase - - - 0.00000000000000000000000000000000000000000000005791 176.0
SYD3_k127_1165627_6 GtrA-like protein - - - 0.00000000000000000000000000000003256 136.0
SYD3_k127_1165627_7 cytochrome - - - 0.00000000000000000002275 99.0
SYD3_k127_1173119_0 Transposase IS66 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 603.0
SYD3_k127_1173119_1 PFAM IS66 Orf2 family protein K07484 - - 0.00000000000000000000000000000000000000006118 154.0
SYD3_k127_1173119_2 Transposase DDE domain - - - 0.000000000006979 68.0
SYD3_k127_133332_0 TIGRFAM outer membrane protein assembly complex, YaeT protein K07277 - - 0.0 1244.0
SYD3_k127_133332_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 7.924e-308 949.0
SYD3_k127_133332_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 3.763e-294 917.0
SYD3_k127_133332_3 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001256 252.0
SYD3_k127_133332_4 Outer membrane protein (OmpH-like) K06142 - - 0.0000000000000000000000000000000000000000000000000000000005378 210.0
SYD3_k127_133332_5 TIGRFAM TonB K03832 - - 0.0000000000000000000000000000000000000000000000000812 188.0
SYD3_k127_1389192_0 - - - - 0.000000000000000000000001774 115.0
SYD3_k127_1389192_1 - - - - 0.0000000000002301 72.0
SYD3_k127_1389192_2 Belongs to the ompA family K03640 - - 0.0000000001177 62.0
SYD3_k127_1397847_0 Acyl-CoA dehydrogenase, C-terminal domain K00248,K09478 - 1.3.8.1,1.3.99.12 1.556e-208 653.0
SYD3_k127_1397847_1 FAD-NAD(P)-binding K01854 - 5.4.99.9 5.754e-194 612.0
SYD3_k127_1397847_10 Met-10+ like-protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004585 254.0
SYD3_k127_1397847_11 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004601 247.0
SYD3_k127_1397847_12 Tfp pilus assembly protein FimV - - - 0.000000000000000000000001537 114.0
SYD3_k127_1397847_13 - - - - 0.000000000000000000001237 102.0
SYD3_k127_1397847_14 Putative regulatory protein - - - 0.0000000000000006129 80.0
SYD3_k127_1397847_15 PEP-CTERM motif - - - 0.0006012 50.0
SYD3_k127_1397847_2 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003292 548.0
SYD3_k127_1397847_3 Serine aminopeptidase, S33 K07019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 429.0
SYD3_k127_1397847_4 Na+/H+ antiporter 1 K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007967 432.0
SYD3_k127_1397847_5 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004371 414.0
SYD3_k127_1397847_6 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006521 395.0
SYD3_k127_1397847_7 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 373.0
SYD3_k127_1397847_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 309.0
SYD3_k127_1397847_9 glycoside hydrolase family 2 sugar binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 310.0
SYD3_k127_1418096_0 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001656 269.0
SYD3_k127_1418096_1 domain protein - - - 0.000000000000000000000000000000000002618 151.0
SYD3_k127_1418096_2 PFAM Glycosyl transferase family 2 - - - 0.0000000007582 64.0
SYD3_k127_1419599_0 cell shape determining protein MreB K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 471.0
SYD3_k127_1419599_1 PFAM FecR protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009375 473.0
SYD3_k127_1419599_2 Aldehyde dehydrogenase family K00141,K22187 - 1.2.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004959 362.0
SYD3_k127_1419599_3 Putative esterase - - - 0.000000000000000000000000000000002236 141.0
SYD3_k127_142846_0 Zinc-binding dehydrogenase K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000809 571.0
SYD3_k127_142846_1 PFAM Alcohol dehydrogenase K00008 - 1.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004453 555.0
SYD3_k127_142846_2 Squalene/phytoene synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 463.0
SYD3_k127_142846_3 PFAM Squalene phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009411 369.0
SYD3_k127_142846_4 FAD dependent oxidoreductase K00514 - 1.3.5.6 0.000000000000000000000000000000000000000000000000000000000000000000000005723 249.0
SYD3_k127_142846_5 TIGRFAM hopanoid-associated sugar epimerase K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000002323 184.0
SYD3_k127_142846_6 Phosphorylase superfamily K01243 - 3.2.2.9 0.00000000000000000000000000000000000000000000002743 179.0
SYD3_k127_1429640_0 Sodium Bile acid symporter family K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 580.0
SYD3_k127_1429640_1 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005816 572.0
SYD3_k127_1429640_2 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009683 294.0
SYD3_k127_1429640_3 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000003327 179.0
SYD3_k127_1429640_4 - - - - 0.0000000000000000000000000000000000000465 151.0
SYD3_k127_143936_0 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 428.0
SYD3_k127_143936_1 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004051 394.0
SYD3_k127_143936_2 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008078 378.0
SYD3_k127_143936_3 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000714 317.0
SYD3_k127_143936_4 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006341 274.0
SYD3_k127_143936_5 Predicted membrane protein (DUF2339) - - - 0.00000000000000001749 83.0
SYD3_k127_143936_6 Ftsk_gamma K03466 - - 0.0000006047 52.0
SYD3_k127_1450149_0 Peptidase M56 - - - 5.943e-224 708.0
SYD3_k127_1450149_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 1.379e-195 614.0
SYD3_k127_1450149_2 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 556.0
SYD3_k127_1450149_3 Efflux transporter, RND family, MFP subunit K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006909 542.0
SYD3_k127_1450149_4 penicillin-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008217 519.0
SYD3_k127_1450149_5 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005272 422.0
SYD3_k127_1450149_6 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 385.0
SYD3_k127_1450149_7 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000000000000000005051 198.0
SYD3_k127_1459405_0 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 0.0 1252.0
SYD3_k127_1459405_1 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 6.191e-286 899.0
SYD3_k127_1459405_10 converts alpha-aldose to the beta-anomer - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007359 399.0
SYD3_k127_1459405_11 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 367.0
SYD3_k127_1459405_12 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000996 299.0
SYD3_k127_1459405_14 Domain of Unknown function (DUF542) K07322 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001124 270.0
SYD3_k127_1459405_15 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001638 262.0
SYD3_k127_1459405_16 PFAM Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001996 263.0
SYD3_k127_1459405_17 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000003677 248.0
SYD3_k127_1459405_18 cyclic nucleotide binding K01420,K21556,K21562 - - 0.00000000000000000000000000000000000000000000000000000000001342 210.0
SYD3_k127_1459405_19 Putative glycolipid-binding K09957 - - 0.000000000000000000000000000000000000000000000000494 181.0
SYD3_k127_1459405_2 Prokaryotic cytochrome b561 - - - 5.821e-257 808.0
SYD3_k127_1459405_20 protein-(glutamine-N5) methyltransferase activity K02493,K16868 - 2.1.1.265,2.1.1.297 0.000000000000000000000000000000000000000000005407 166.0
SYD3_k127_1459405_21 Ferredoxin - - - 0.00000000000000000000000000000000000000000003893 163.0
SYD3_k127_1459405_22 - - - - 0.0000000000000000000000000000000000000006041 157.0
SYD3_k127_1459405_23 Domain of unknown function (DUF4870) - - - 0.000000000000000000000000000005503 124.0
SYD3_k127_1459405_24 Domain of unknown function (DUF2383) - - - 0.00000000000000000000000000001154 123.0
SYD3_k127_1459405_25 Response regulator, receiver - - - 0.00000000000000000000000000009509 124.0
SYD3_k127_1459405_26 Dioxygenase - - - 0.00000000000000000000003688 107.0
SYD3_k127_1459405_27 Protein of unknown function (DUF2752) - - - 0.000000000000000000004306 102.0
SYD3_k127_1459405_28 Interferon-induced transmembrane protein - - - 0.00000000000000000002953 96.0
SYD3_k127_1459405_3 NapC/NirT cytochrome c family, N-terminal region - - - 1.657e-212 670.0
SYD3_k127_1459405_4 Iron-sulfur cluster-binding domain - - - 2.35e-199 627.0
SYD3_k127_1459405_5 hydrolase activity, acting on ester bonds - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007269 507.0
SYD3_k127_1459405_7 Glycosyl hydrolases family 43 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 447.0
SYD3_k127_1459405_8 cyclic nucleotide-binding K01420,K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 418.0
SYD3_k127_1459405_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003587 428.0
SYD3_k127_1461080_0 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009628 483.0
SYD3_k127_1461080_1 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004681 411.0
SYD3_k127_1461080_10 - - - - 0.0000000000000000000000142 116.0
SYD3_k127_1461080_11 helix_turn_helix, Lux Regulon - - - 0.00000000000000201 85.0
SYD3_k127_1461080_12 Glycosyltransferase like family 2 - - - 0.00000121 56.0
SYD3_k127_1461080_13 domain, Protein - - - 0.00003716 57.0
SYD3_k127_1461080_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 314.0
SYD3_k127_1461080_3 GtrA-like protein K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000001432 245.0
SYD3_k127_1461080_4 Putative Ig domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000233 259.0
SYD3_k127_1461080_5 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000009537 243.0
SYD3_k127_1461080_6 Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000000000448 217.0
SYD3_k127_1461080_7 transferase activity, transferring glycosyl groups K00754 - - 0.000000000000000000000000000000000000000000000009255 188.0
SYD3_k127_1461080_8 polysaccharide biosynthetic process - - - 0.000000000000000000000000000000006091 145.0
SYD3_k127_1461080_9 Dehydrogenase - - - 0.00000000000000000000001032 116.0
SYD3_k127_1463427_0 Peptidase C26 K07010 - - 0.000000000000000000000000000000000000000000000000000004394 194.0
SYD3_k127_1463427_1 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000007877 184.0
SYD3_k127_1470474_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1143.0
SYD3_k127_1481215_0 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 298.0
SYD3_k127_1481215_1 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.00000000000000000000000000000000004328 148.0
SYD3_k127_1481257_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2115.0
SYD3_k127_1481257_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 396.0
SYD3_k127_1481257_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000922 247.0
SYD3_k127_1481257_3 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000000000000000000000000000000002073 231.0
SYD3_k127_1481257_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000002308 179.0
SYD3_k127_1481257_5 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000003491 143.0
SYD3_k127_1523350_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 6.138e-232 726.0
SYD3_k127_1523350_1 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008146 564.0
SYD3_k127_1523350_10 - - - - 0.00000000000000000000000000008979 121.0
SYD3_k127_1523350_11 methyltransferase activity - - - 0.0000000000006599 77.0
SYD3_k127_1523350_12 with different specificities (related to short-chain alcohol K00059 - 1.1.1.100 0.0000000000008019 68.0
SYD3_k127_1523350_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 467.0
SYD3_k127_1523350_3 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000294 243.0
SYD3_k127_1523350_4 MerR HTH family regulatory protein K13640 - - 0.000000000000000000000000000000000000000000000000000001042 194.0
SYD3_k127_1523350_5 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000006058 198.0
SYD3_k127_1523350_6 cytochrome c nitrite reductase K15876 - - 0.0000000000000000000000000000000000000000000000000004562 190.0
SYD3_k127_1523350_7 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000005496 151.0
SYD3_k127_1523350_8 OsmC-like protein - - - 0.00000000000000000000000000001473 123.0
SYD3_k127_1526784_0 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006646 309.0
SYD3_k127_1526784_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000431 259.0
SYD3_k127_15269_0 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 446.0
SYD3_k127_15269_1 lipoprotein localization to outer membrane K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 302.0
SYD3_k127_15269_2 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III - - - 0.0000000000000000000000000000000000000000000000000000000000000000006594 230.0
SYD3_k127_15269_3 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000002549 179.0
SYD3_k127_15269_4 PFAM Septum formation initiator K05589 - - 0.00000000000000000000005398 102.0
SYD3_k127_15269_5 - - - - 0.0000000000000000000009378 100.0
SYD3_k127_1548672_0 transport - - - 0.0 1102.0
SYD3_k127_1548672_1 Glycosyl hydrolases family 2 K01192 - 3.2.1.25 2.811e-235 748.0
SYD3_k127_1548672_2 PFAM Sugar isomerase (SIS) K02082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 347.0
SYD3_k127_1548672_3 DeoR C terminal sensor domain K02081 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 297.0
SYD3_k127_1555053_0 Succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 1.067e-285 880.0
SYD3_k127_1555053_1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000164 287.0
SYD3_k127_156936_0 Phosphoesterase family K01114 - 3.1.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000054 597.0
SYD3_k127_156936_1 PFAM glycosyl transferase family 39 - - - 0.0000000000000000000000000000000002546 136.0
SYD3_k127_156936_2 Protein of unknown function (DUF664) - - - 0.00000000000000000000000000008933 122.0
SYD3_k127_156936_3 acid phosphatase activity K03651 - 3.1.4.53 0.0000000000000002236 94.0
SYD3_k127_1583915_0 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 1.828e-201 633.0
SYD3_k127_1583915_1 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 524.0
SYD3_k127_1583915_10 - - - - 0.0000000000000000000000000000000000000003652 155.0
SYD3_k127_1583915_11 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000132 128.0
SYD3_k127_1583915_12 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000006024 106.0
SYD3_k127_1583915_2 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004017 503.0
SYD3_k127_1583915_3 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 470.0
SYD3_k127_1583915_4 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) K02626 - 4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000343 345.0
SYD3_k127_1583915_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007669 332.0
SYD3_k127_1583915_6 4Fe-4S dicluster domain K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000002403 243.0
SYD3_k127_1583915_7 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000000000000000000000000000000000003617 212.0
SYD3_k127_1583915_8 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000004513 177.0
SYD3_k127_1583915_9 TonB-dependent Receptor Plug K16090 - - 0.000000000000000000000000000000000000000004889 158.0
SYD3_k127_1598820_0 Putative glucoamylase K01183 - 3.2.1.14 7.108e-288 902.0
SYD3_k127_1598820_1 PFAM peptidase M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008879 595.0
SYD3_k127_1598820_2 N-terminal domain of Peptidase_S41 in eukaryotic IRBP - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009604 312.0
SYD3_k127_1598820_3 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000001783 259.0
SYD3_k127_1598820_4 RES - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004787 252.0
SYD3_k127_1598820_5 Glycosyl hydrolase family 3 C-terminal domain K05349 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000001839 240.0
SYD3_k127_1598820_6 Redoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000003104 230.0
SYD3_k127_1598820_7 Belongs to the Fur family K09825 - - 0.0000000000000000000000000000000000000000000000000000002713 197.0
SYD3_k127_1598820_8 Protein of unknown function (DUF2384) - - - 0.00000000000000000000000000000000000000000001783 167.0
SYD3_k127_1598820_9 hydrolase of the alpha beta-hydrolase fold - - - 0.000000000000000000000000000000000000009436 159.0
SYD3_k127_1619447_0 PFAM Integrase catalytic region K07497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 300.0
SYD3_k127_1619447_1 Transposase K07497 - - 0.000000000000000000000000000005569 121.0
SYD3_k127_1622930_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 6.609e-234 728.0
SYD3_k127_1622930_1 Probable RNA and SrmB- binding site of polymerase A K00970 - 2.7.7.19 1.419e-197 625.0
SYD3_k127_1622930_10 Member of the two-component regulatory system AtoS AtoC. In the presence of acetoacetate, AtoS AtoC stimulates the expression of the atoDAEB operon, leading to short chain fatty acid catabolism and activation of the poly-(R)-3-hydroxybutyrate (cPHB) biosynthetic pathway. Also induces the operon in response to spermidine. Involved in the regulation of motility and chemotaxis, via transcriptional induction of the flagellar regulon. AtoS is a membrane-associated kinase that phosphorylates and activates AtoC in response to environmental signals K07710 GO:0000155,GO:0000160,GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0017076,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.13.3 0.00000000000000000000000000000000000000000005409 178.0
SYD3_k127_1622930_11 phosphorelay signal transduction system - - - 0.00000000000000000000000000000001196 130.0
SYD3_k127_1622930_13 - - - - 0.00000000002853 66.0
SYD3_k127_1622930_15 SnoaL-like domain - - - 0.000004342 55.0
SYD3_k127_1622930_2 heat shock protein 70 K04043,K04044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004773 607.0
SYD3_k127_1622930_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 541.0
SYD3_k127_1622930_4 PFAM heat shock protein DnaJ K04082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006256 331.0
SYD3_k127_1622930_5 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004778 289.0
SYD3_k127_1622930_6 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005579 255.0
SYD3_k127_1622930_7 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000004072 201.0
SYD3_k127_1622930_8 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000000000000000005455 189.0
SYD3_k127_1622930_9 CHASE3 domain - - - 0.000000000000000000000000000000000000000000000000004706 200.0
SYD3_k127_1639958_0 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001498 286.0
SYD3_k127_1639958_1 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000231 136.0
SYD3_k127_1649141_0 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 1.378e-250 784.0
SYD3_k127_1649141_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001023 287.0
SYD3_k127_166840_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 4.566e-277 862.0
SYD3_k127_166840_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000874 226.0
SYD3_k127_166840_2 NADH dehydrogenase K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000007066 204.0
SYD3_k127_166840_3 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000453 201.0
SYD3_k127_166840_4 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K00340 - 1.6.5.3 0.00000000000000000000000000000000000000000000000804 173.0
SYD3_k127_1674235_0 Bacterial protein of unknown function (DUF853) - - - 1.123e-204 653.0
SYD3_k127_1674235_1 Response regulator receiver K07714 - - 3.142e-202 643.0
SYD3_k127_1674235_10 Polysulphide reductase, NrfD - - - 0.00000001073 57.0
SYD3_k127_1674235_2 Aspartate-ammonia ligase K01914 GO:0003674,GO:0003824,GO:0004071,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006528,GO:0006529,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009987,GO:0016053,GO:0016211,GO:0016874,GO:0016879,GO:0016880,GO:0019752,GO:0032787,GO:0033554,GO:0034641,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050896,GO:0051716,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.1.1 1.803e-200 629.0
SYD3_k127_1674235_3 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004293 531.0
SYD3_k127_1674235_4 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005625 362.0
SYD3_k127_1674235_5 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 351.0
SYD3_k127_1674235_6 glycine decarboxylation via glycine cleavage system K02437 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002689 282.0
SYD3_k127_1674235_7 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001785 234.0
SYD3_k127_1674235_8 Carbohydrate family 9 binding domain-like - - - 0.00000000000000000000001074 109.0
SYD3_k127_1674235_9 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000001218 79.0
SYD3_k127_1695954_0 PFAM transposase IS4 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004704 446.0
SYD3_k127_1695954_1 Transposase K07491 - - 0.000000000000000000000000000000000000000000000000000000000000000406 226.0
SYD3_k127_1711009_0 peptidoglycan turnover K06958,K07102 GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006022,GO:0006040,GO:0006082,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 602.0
SYD3_k127_1711009_1 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009215 310.0
SYD3_k127_1711009_2 Ribosomal protein S1-like RNA-binding domain K02945 - - 0.00006045 46.0
SYD3_k127_171540_0 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 370.0
SYD3_k127_171540_1 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000000000000000000000000008523 229.0
SYD3_k127_171540_2 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.000000000000000000000000000000000000000000000582 167.0
SYD3_k127_171540_3 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000006366 86.0
SYD3_k127_1721301_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895,K01908 GO:0003674,GO:0003824,GO:0003987,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006091,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016405,GO:0016874,GO:0016877,GO:0016878,GO:0017144,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046950,GO:0046951,GO:0050218,GO:0070013,GO:0071704,GO:1901568,GO:1901570,GO:1901576,GO:1902224 6.2.1.1,6.2.1.17 1.096e-254 794.0
SYD3_k127_1721301_1 His Kinase A (phosphoacceptor) domain - - - 1.155e-204 651.0
SYD3_k127_1721301_2 Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 565.0
SYD3_k127_1721301_3 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 557.0
SYD3_k127_1721301_4 FAD dependent oxidoreductase K00514 - 1.3.5.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003304 443.0
SYD3_k127_1721301_5 cyclic nucleotide-binding K01420,K10914 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005838 412.0
SYD3_k127_1721301_6 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 373.0
SYD3_k127_1721301_7 Peptidase family M54 K06974 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007486 264.0
SYD3_k127_1729547_0 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 360.0
SYD3_k127_1729547_1 COG1131 ABC-type multidrug transport system ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009556 349.0
SYD3_k127_1729547_2 HlyD family secretion protein K01993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005414 291.0
SYD3_k127_1729547_3 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000002383 188.0
SYD3_k127_1729547_4 tetR family - - - 0.00000000000000000000000000000000007857 140.0
SYD3_k127_1729547_5 PFAM glycosyl hydrolase - - - 0.00000000000000000006684 90.0
SYD3_k127_1746167_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 572.0
SYD3_k127_1746167_1 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000005008 248.0
SYD3_k127_1746167_2 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000000000001519 193.0
SYD3_k127_1746167_3 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000000000000000000001522 103.0
SYD3_k127_1781824_0 TonB-dependent Receptor Plug Domain - - - 6.707e-303 969.0
SYD3_k127_1781824_1 cellulose binding - - - 6.843e-224 697.0
SYD3_k127_1781824_2 Glycosyl hydrolase family 30 beta sandwich domain K01201 - 3.2.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 487.0
SYD3_k127_1781824_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001208 274.0
SYD3_k127_1781824_4 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.0000000000000000000000000000000000000001003 153.0
SYD3_k127_1781824_5 RNA signal recognition particle 4.5S RNA - - - 0.000000000000000000000000000002189 121.0
SYD3_k127_1781824_6 Lysin motif - - - 0.000000000000000000000000001113 117.0
SYD3_k127_1849261_0 Pyruvate ferredoxin/flavodoxin oxidoreductase K00187 - 1.2.7.7 6.862e-242 754.0
SYD3_k127_1873415_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 544.0
SYD3_k127_1873415_1 Protein involved in outer membrane biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006906 404.0
SYD3_k127_1873415_2 PFAM tRNA rRNA methyltransferase, SpoU K02533 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002867 280.0
SYD3_k127_1873415_3 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001139 247.0
SYD3_k127_1873415_4 Histidine kinase K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000002805 216.0
SYD3_k127_1873415_5 Histidine kinase-like ATPase domain - - - 0.00000000000000000000000000000000000006317 161.0
SYD3_k127_1874726_0 Cys/Met metabolism PLP-dependent enzyme - - - 1.353e-204 640.0
SYD3_k127_1874726_1 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 537.0
SYD3_k127_1874726_2 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000001572 149.0
SYD3_k127_1874726_3 - - - - 0.000000000000000635 85.0
SYD3_k127_1907919_0 DNA-directed DNA polymerase K02337 - 2.7.7.7 0.0 1641.0
SYD3_k127_1907919_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003801 473.0
SYD3_k127_1907919_2 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 451.0
SYD3_k127_1907919_3 metallocarboxypeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 373.0
SYD3_k127_1907919_5 cytochrome - - - 0.0000000000000000000000000000000000000007367 154.0
SYD3_k127_1914584_0 glutamine synthetase K01915 - 6.3.1.2 3.713e-240 751.0
SYD3_k127_1914584_1 Cold shock protein K03704 - - 0.0000000000000000000000000000000005274 132.0
SYD3_k127_1914584_2 Transposase IS200 like K07491 - - 0.00000000000000000000000000000144 126.0
SYD3_k127_1914584_3 Major facilitator Superfamily - - - 0.00000000000000000000000006876 108.0
SYD3_k127_1914584_4 Bacterial transcription activator, effector binding domain K13652 - - 0.0000000000000000000006935 105.0
SYD3_k127_1927922_0 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.000000000000000000000000000000000000000000000000000000000000004991 229.0
SYD3_k127_1927922_1 FlaG protein K06603 - - 0.0001808 48.0
SYD3_k127_1933310_0 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000542 472.0
SYD3_k127_1933310_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 411.0
SYD3_k127_1933310_2 XdhC and CoxI family K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000608 353.0
SYD3_k127_1933310_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 329.0
SYD3_k127_1933310_6 PspC domain K03973 - - 0.00000000000000000000000000000004846 127.0
SYD3_k127_1933310_7 alpha/beta hydrolase fold - - - 0.000000000000000001058 87.0
SYD3_k127_1933310_8 - - - - 0.000000000002621 76.0
SYD3_k127_1937456_0 Protein of unknown function (DUF1343) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004866 583.0
SYD3_k127_1937456_1 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 542.0
SYD3_k127_1937456_2 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000001027 217.0
SYD3_k127_1937456_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.00000000000000000000000000000000000000000000000000000187 197.0
SYD3_k127_1937456_4 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000000000000000000000000000000001716 155.0
SYD3_k127_1937456_5 - - - - 0.00000000000000000000000000003885 119.0
SYD3_k127_1944314_0 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000007296 174.0
SYD3_k127_1944314_1 - - - - 0.0000000000000000000000000000000000000000009233 160.0
SYD3_k127_1944314_3 Protein of unknown function (DUF3995) - - - 0.00000000001763 71.0
SYD3_k127_1944314_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000216 69.0
SYD3_k127_1963048_0 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 5.077e-286 896.0
SYD3_k127_1963048_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 379.0
SYD3_k127_1963048_2 Glycosyl hydrolases family 2, TIM barrel domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 310.0
SYD3_k127_1963048_3 Putative glycosyl hydrolase domain - - - 0.0000000000000000000000000004886 120.0
SYD3_k127_1963048_4 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.00000000000000000004802 97.0
SYD3_k127_1987580_0 Belongs to the glycosyl hydrolase 43 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001341 258.0
SYD3_k127_1994136_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000002536 92.0
SYD3_k127_2050684_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 440.0
SYD3_k127_2050684_1 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 364.0
SYD3_k127_2050684_2 PFAM 6-pyruvoyl tetrahydropterin K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000000000008887 208.0
SYD3_k127_2050684_3 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000009177 201.0
SYD3_k127_2050684_4 - - - - 0.00000000000000000000000000000005158 136.0
SYD3_k127_2050852_0 homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 528.0
SYD3_k127_2050852_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005996 419.0
SYD3_k127_2050852_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 358.0
SYD3_k127_2054063_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 571.0
SYD3_k127_2054063_1 Uncharacterized protein conserved in bacteria (DUF2059) K09924 - - 0.000000000000001969 86.0
SYD3_k127_2101673_0 PFAM MotA TolQ ExbB proton channel K02556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 337.0
SYD3_k127_2101673_1 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.0000000000000000000000000000000000000000000000000000000000399 213.0
SYD3_k127_2101673_2 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.00000000000000000000001421 109.0
SYD3_k127_2101673_3 Flagellar protein, FlbD K02385 - - 0.00000000001885 74.0
SYD3_k127_2117459_0 Pfam:HxxPF_rpt - - - 0.0 2414.0
SYD3_k127_2117459_1 Taurine catabolism dioxygenase TauD, TfdA family K20157 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016705,GO:0016706,GO:0051213,GO:0055114 1.14.11.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007873 336.0
SYD3_k127_2117459_2 Aminotransferase class-V - - - 0.000000000008341 68.0
SYD3_k127_213050_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 2.5e-322 1004.0
SYD3_k127_213050_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 1.33e-230 721.0
SYD3_k127_213050_2 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 460.0
SYD3_k127_213050_3 Bacterial regulatory protein, Fis family K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 358.0
SYD3_k127_213050_4 HD domain K07023 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000024 260.0
SYD3_k127_213050_5 PhoQ Sensor - - - 0.0000000000000000000000000000000008421 142.0
SYD3_k127_213050_7 polysaccharide deacetylase - - - 0.000004433 51.0
SYD3_k127_2153524_0 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000004463 200.0
SYD3_k127_2153524_1 - - - - 0.00000000009771 70.0
SYD3_k127_2154389_0 oligopeptide transport K03305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 474.0
SYD3_k127_2154389_1 DNA alkylation repair enzyme - - - 0.0000000000002522 73.0
SYD3_k127_2165402_0 Metallopeptidase family M24 K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 569.0
SYD3_k127_2165402_1 DNA alkylation repair enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 316.0
SYD3_k127_2165402_2 - - - - 0.00000000000000000000000000000000000000000004778 170.0
SYD3_k127_2165402_3 Acetyltransferase (GNAT) domain - - - 0.00000000000000004315 81.0
SYD3_k127_2165402_4 - - - - 0.0000000000001942 78.0
SYD3_k127_2220110_0 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000002833 234.0
SYD3_k127_2220110_1 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000009405 183.0
SYD3_k127_2220110_2 ABC-2 family transporter protein - - - 0.0000000000000000000000000000001757 135.0
SYD3_k127_2220110_3 PFAM AMP-dependent synthetase and ligase - - - 0.0002073 53.0
SYD3_k127_2226367_0 PFAM glycosyl transferase, family 28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 445.0
SYD3_k127_2226367_1 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009417 307.0
SYD3_k127_2226367_2 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000003111 200.0
SYD3_k127_2226367_3 Uncharacterised protein family UPF0066 K01628 - 4.1.2.17 0.0000000000000000000000000000000000000000000000000004406 187.0
SYD3_k127_2249692_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 5.363e-277 857.0
SYD3_k127_2249692_1 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000000002667 227.0
SYD3_k127_2249692_2 - - - - 0.000000000000000000000000000001951 122.0
SYD3_k127_2249692_3 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.0000000000000000000000016 103.0
SYD3_k127_2249692_4 Regulatory protein, FmdB family - - - 0.0000000000704 65.0
SYD3_k127_2259143_0 Peptidase S46 - - - 7.001e-249 786.0
SYD3_k127_2259143_1 Amidohydrolase family - - - 1.233e-230 723.0
SYD3_k127_2259143_2 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 310.0
SYD3_k127_2259143_3 amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001671 286.0
SYD3_k127_2259143_4 Protein of unknown function (DUF421) - - - 0.000000000000000000000000000000000000000000000001494 179.0
SYD3_k127_2259143_5 - - - - 0.00000000000000000000000000000000000000009193 166.0
SYD3_k127_2259143_6 - - - - 0.00000000000000000002558 96.0
SYD3_k127_2373906_0 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 1.449e-205 655.0
SYD3_k127_2373906_1 MgtE intracellular N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007251 537.0
SYD3_k127_2373906_10 methyltransferase - - - 0.000000000000000000000000000000000000006176 152.0
SYD3_k127_2373906_11 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000002914 102.0
SYD3_k127_2373906_2 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000002116 249.0
SYD3_k127_2373906_3 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000002039 218.0
SYD3_k127_2373906_4 PFAM cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000428 218.0
SYD3_k127_2373906_5 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000007233 203.0
SYD3_k127_2373906_6 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000000000000000000000000000000000000000000000187 199.0
SYD3_k127_2373906_7 HAD-hyrolase-like K19270 - 3.1.3.23 0.00000000000000000000000000000000000000000000000000000003608 203.0
SYD3_k127_2373906_8 PFAM cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000004637 207.0
SYD3_k127_2373906_9 - - - - 0.000000000000000000000000000000000000000415 154.0
SYD3_k127_2415828_0 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008333 389.0
SYD3_k127_2415828_1 Belongs to the peptidase S8 family K08651 - 3.4.21.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004055 381.0
SYD3_k127_2468796_0 Participates in initiation and elongation during chromosome replication K02314,K02316 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003445 418.0
SYD3_k127_2468796_1 HNH nucleases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 355.0
SYD3_k127_2468796_2 Scavenger mRNA decapping enzyme C-term binding - - - 0.000000000000000000000000000000000000000000000003472 178.0
SYD3_k127_2468796_3 2-Nitropropane dioxygenase K00459 - 1.13.12.16 0.000000007407 57.0
SYD3_k127_2490180_0 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004257 308.0
SYD3_k127_2490180_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 286.0
SYD3_k127_2490180_2 Protein of unknown function (DUF541) K09797 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005216 283.0
SYD3_k127_2490180_3 Bifunctional nuclease K08999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003574 266.0
SYD3_k127_2490180_4 DnaJ molecular chaperone homology domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000005344 237.0
SYD3_k127_2512004_0 PFAM CobQ CobB MinD ParA nucleotide binding domain - - - 0.000000000000000000002235 106.0
SYD3_k127_251347_0 fatty acid beta-oxidation using acyl-CoA dehydrogenase K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 434.0
SYD3_k127_251347_1 electron transfer activity K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 394.0
SYD3_k127_251347_2 oxidoreductase K00311,K00313 - 1.5.5.1 0.0000000000000000000000000000002445 124.0
SYD3_k127_2579928_0 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 2.185e-268 837.0
SYD3_k127_2579928_1 Phosphofructokinase K21071 - 2.7.1.11,2.7.1.90 3.653e-219 683.0
SYD3_k127_2579928_2 Protein of unknown function (DUF763) K09003 - - 3.192e-198 623.0
SYD3_k127_2579928_3 FAD binding domain K00493 - 1.14.14.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 433.0
SYD3_k127_2579928_4 NeuB family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005602 355.0
SYD3_k127_2579928_5 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 299.0
SYD3_k127_2579928_6 oxidation-reduction process K18239,K18240 GO:0003674,GO:0003824,GO:0016787,GO:0016801,GO:0016803 3.3.2.13,4.1.3.40,4.1.3.45 0.000000000000000000000000000000000000000000000000000000000000000000003095 240.0
SYD3_k127_2579928_7 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000008581 158.0
SYD3_k127_2579928_8 PFAM RDD domain containing protein - - - 0.00000000007797 67.0
SYD3_k127_259238_0 Mu-like prophage FluMu protein gp28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007384 559.0
SYD3_k127_259238_1 peptidase S1 and S6 chymotrypsin Hap - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006926 483.0
SYD3_k127_259238_10 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000008801 60.0
SYD3_k127_259238_2 ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000176 272.0
SYD3_k127_259238_3 phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000003917 205.0
SYD3_k127_259238_4 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000006264 189.0
SYD3_k127_259238_5 YjbR - - - 0.00000000000000000000000000003653 122.0
SYD3_k127_259238_6 - - - - 0.000000000000000000005233 98.0
SYD3_k127_259238_8 - - - - 0.00000000000000000002626 92.0
SYD3_k127_259238_9 - - - - 0.0000000000000000427 85.0
SYD3_k127_261350_0 synthetase, class II (G H P K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006655 602.0
SYD3_k127_261350_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 519.0
SYD3_k127_261350_2 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000000000000001639 222.0
SYD3_k127_2616602_0 transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 411.0
SYD3_k127_2616602_1 COG0534 Na -driven multidrug efflux pump K03327 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002674 398.0
SYD3_k127_2616602_2 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000001325 168.0
SYD3_k127_2616602_3 Lipid A 3-O-deacylase (PagL) - - - 0.00000000000000000000000000002257 122.0
SYD3_k127_2735089_0 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000001438 243.0
SYD3_k127_2735089_1 PFAM Amidase - - - 0.000000000000000000000000000000000000000000000000000000000002343 215.0
SYD3_k127_2736233_0 N-terminal domain of (some) glycogen debranching enzymes - - - 0.0 1135.0
SYD3_k127_2736233_1 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 9.195e-241 752.0
SYD3_k127_2736233_10 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 521.0
SYD3_k127_2736233_11 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 472.0
SYD3_k127_2736233_12 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006479 458.0
SYD3_k127_2736233_13 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002943 411.0
SYD3_k127_2736233_14 Protein of unknown function (DUF1698) K15257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 403.0
SYD3_k127_2736233_15 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006846 251.0
SYD3_k127_2736233_16 PFAM Iron sulphur-containing domain, CDGSH-type - - - 0.0000000000000000000000000001294 119.0
SYD3_k127_2736233_17 chaperone-mediated protein folding - - - 0.000000000000000000000002182 105.0
SYD3_k127_2736233_18 - - - - 0.00000000000000000805 91.0
SYD3_k127_2736233_19 BON domain - - - 0.00000000000001192 83.0
SYD3_k127_2736233_2 Two component regulator propeller - - - 9.462e-226 720.0
SYD3_k127_2736233_20 - - - - 0.00000000001545 71.0
SYD3_k127_2736233_21 - - - - 0.00000000002151 64.0
SYD3_k127_2736233_22 Histidine kinase A domain protein - - - 0.0002458 47.0
SYD3_k127_2736233_3 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 5.105e-222 697.0
SYD3_k127_2736233_4 von Willebrand factor (vWF) type A domain K07114 - - 2.207e-217 681.0
SYD3_k127_2736233_5 Bacterial regulatory protein, Fis family K07713 - - 7.144e-217 683.0
SYD3_k127_2736233_6 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006031 567.0
SYD3_k127_2736233_7 Polysaccharide biosynthesis protein K17947 - 5.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004442 555.0
SYD3_k127_2736233_8 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007411 535.0
SYD3_k127_2736233_9 Glycosyl hydrolase catalytic core - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000361 529.0
SYD3_k127_2739501_0 ABC transporter K06158 - - 2.916e-251 781.0
SYD3_k127_2739501_1 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 3.585e-199 629.0
SYD3_k127_2747674_0 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000000000009873 216.0
SYD3_k127_2747674_1 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 0.00000000000000000000000000000000000000000000000000000008432 196.0
SYD3_k127_2747674_2 Domain of unknown function (DUF4349) - - - 0.000000000000000004508 96.0
SYD3_k127_2747674_3 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00000001042 58.0
SYD3_k127_2759700_0 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003555 323.0
SYD3_k127_2759700_1 class II (D K K01893 - 6.1.1.22 0.00000000000000000000000000000000000000000000000001895 181.0
SYD3_k127_2773807_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 5.183e-253 790.0
SYD3_k127_2773807_1 Zn-dependent dipeptidase, microsomal dipeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000328 417.0
SYD3_k127_2773807_2 TIGRFAM Outer membrane assembly lipoprotein YfiO K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 394.0
SYD3_k127_2773807_3 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 329.0
SYD3_k127_2773807_4 Protein of unknown function (DUF971) - - - 0.00000000000000000000000000000000000000000000000000000000000004668 215.0
SYD3_k127_2773807_5 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000001061 184.0
SYD3_k127_2773807_6 TIGRFAM drug resistance transporter, Bcr CflA subfamily K07552 - - 0.000173 47.0
SYD3_k127_2798556_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002634 604.0
SYD3_k127_2798556_1 Protein conserved in bacteria - - - 0.000000000000000000002179 95.0
SYD3_k127_2800080_0 TonB-dependent Receptor Plug K16090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 413.0
SYD3_k127_2800080_1 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000007204 130.0
SYD3_k127_2800080_2 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000000000007012 92.0
SYD3_k127_2800080_3 Recombinase zinc beta ribbon domain - - - 0.00007484 49.0
SYD3_k127_2813540_0 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 488.0
SYD3_k127_2813540_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005254 454.0
SYD3_k127_2813540_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004054 383.0
SYD3_k127_2813540_3 Xylose isomerase domain protein TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 295.0
SYD3_k127_2813540_4 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000134 277.0
SYD3_k127_2813540_5 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000000000000000000000000000000007272 229.0
SYD3_k127_2813540_6 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.000000000000000001797 94.0
SYD3_k127_2813540_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000002198 85.0
SYD3_k127_2838172_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1020.0
SYD3_k127_2838172_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 1.695e-194 610.0
SYD3_k127_2838172_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006052 313.0
SYD3_k127_2838172_3 - - - - 0.00000000000000000000000000000000009354 144.0
SYD3_k127_2838172_4 DNA ligase D, 3'-phosphoesterase domain K01971 - 6.5.1.1 0.000000000000000000000000000000001938 131.0
SYD3_k127_2838172_5 Predicted membrane protein (DUF2127) - - - 0.0000000000000000000000000006562 119.0
SYD3_k127_2841233_0 AMP-binding enzyme K01897 - 6.2.1.3 7.066e-227 719.0
SYD3_k127_2841233_1 Phosphofructokinase K00850 - 2.7.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008849 436.0
SYD3_k127_2841233_2 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006144 324.0
SYD3_k127_2841233_3 KR domain K07124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 287.0
SYD3_k127_2841233_4 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000000000000000000006796 263.0
SYD3_k127_2841233_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000002863 218.0
SYD3_k127_288553_0 Alpha/beta hydrolase family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003839 485.0
SYD3_k127_288553_1 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000000000000000000000000000000000000001944 219.0
SYD3_k127_288553_2 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000008728 192.0
SYD3_k127_288553_4 - - - - 0.00000000000000000000000000000000000000001719 154.0
SYD3_k127_288553_5 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000001001 168.0
SYD3_k127_288553_6 COG0670 Integral membrane protein, interacts with FtsH K06890 - - 0.0000000000000000000006057 106.0
SYD3_k127_288553_7 thiamine biosynthesis protein ThiS K03154 - - 0.00000000000000000000302 95.0
SYD3_k127_2899218_0 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 332.0
SYD3_k127_2899218_1 Pfam:Pyridox_oxidase K07006 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002893 272.0
SYD3_k127_2899218_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000009647 182.0
SYD3_k127_2899218_3 Cupin domain - - - 0.000000000000000000000000000000003393 137.0
SYD3_k127_2899218_4 Putative stress-induced transcription regulator - - - 0.000000000000000000000000000004286 127.0
SYD3_k127_2899218_5 Zinc carboxypeptidase - - - 0.000008726 53.0
SYD3_k127_2905592_0 Dehydrogenase E1 component K11381 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 525.0
SYD3_k127_2905592_1 Protein of unknown function, DUF255 - - - 0.00000000000000000000000000000000000000282 153.0
SYD3_k127_2905592_2 DoxX K15977 - - 0.0000000000000000000000000000000000004231 143.0
SYD3_k127_2911819_0 PFAM NADH Ubiquinone plastoquinone (complex I) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003699 594.0
SYD3_k127_2911819_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 404.0
SYD3_k127_2911819_2 PFAM oxidoreductase FAD NAD(P)-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 385.0
SYD3_k127_2911819_3 PFAM NADH-ubiquinone oxidoreductase, chain 49kDa K00333,K12142,K15830 GO:0003674,GO:0005488,GO:0016151,GO:0043167,GO:0043169,GO:0046872,GO:0046914 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000004542 261.0
SYD3_k127_2911819_4 spore germination K00442,K08315 - 3.4.23.51 0.0000000000000000000000000000000000001642 147.0
SYD3_k127_2936043_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 2.553e-223 697.0
SYD3_k127_2936043_1 Carbon starvation protein CstA K06200 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005094 511.0
SYD3_k127_2936043_2 Memo-like protein K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005238 374.0
SYD3_k127_2936043_3 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004906 342.0
SYD3_k127_2936043_4 FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004492 277.0
SYD3_k127_2936043_5 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000000000003639 243.0
SYD3_k127_2936043_6 - - - - 0.000000000000000000000000000000000000000008289 162.0
SYD3_k127_2936043_7 CAAX protease self-immunity - - - 0.0000003506 60.0
SYD3_k127_2951788_0 PFAM Na dependent nucleoside transporter K03317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 593.0
SYD3_k127_2951788_1 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 361.0
SYD3_k127_2951788_2 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00756,K00758 - 2.4.2.2,2.4.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 297.0
SYD3_k127_2951788_3 Belongs to the uridine kinase family K00876 - 2.7.1.48 0.000000000000000000000000000000000000000000000000005568 193.0
SYD3_k127_2970316_0 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004712 314.0
SYD3_k127_2970316_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000004183 228.0
SYD3_k127_2980835_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000004097 65.0
SYD3_k127_2987955_0 Ku70/Ku80 beta-barrel domain K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005697 392.0
SYD3_k127_2987955_1 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000001019 214.0
SYD3_k127_2987955_2 Integral membrane protein DUF92 - - - 0.000000000000000000000000000000000007227 146.0
SYD3_k127_3010081_0 PFAM Adenosine AMP deaminase K01488 - 3.5.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 498.0
SYD3_k127_3010081_1 HI0933 family K07007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006201 284.0
SYD3_k127_3010081_2 Carbonic anhydrase K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000001312 225.0
SYD3_k127_3011235_0 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006405 462.0
SYD3_k127_3011235_1 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003368 456.0
SYD3_k127_3011235_2 - - - - 0.0009065 44.0
SYD3_k127_3011235_3 Domain of unknown function (DUF4279) - - - 0.0009162 51.0
SYD3_k127_301673_0 Glycosyl Hydrolase Family 88 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 424.0
SYD3_k127_301673_1 OmpA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 356.0
SYD3_k127_301673_2 MerR, DNA binding - - - 0.000000000000000000000000000000000000000000000000000006699 195.0
SYD3_k127_301673_3 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.00000000006239 63.0
SYD3_k127_3058210_0 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008731 532.0
SYD3_k127_3058210_1 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 495.0
SYD3_k127_3058210_2 TIGRFAM MazG family protein K02428,K04765 - 3.6.1.66,3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 368.0
SYD3_k127_3058210_3 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004676 344.0
SYD3_k127_3058210_4 IgA Peptidase M64 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005217 269.0
SYD3_k127_3058210_5 Membrane domain of glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000005117 56.0
SYD3_k127_3070178_0 Angiotensin-converting enzyme K01283 - 3.4.15.1 2.562e-276 866.0
SYD3_k127_3070178_1 Tetratricopeptide repeat - - - 3.725e-253 815.0
SYD3_k127_3070178_10 O-methyltransferase, family 2 - - - 0.00000000000000000000000000000000000000000000004773 183.0
SYD3_k127_3070178_11 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000006372 134.0
SYD3_k127_3070178_12 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.00000000000000000000000000001255 121.0
SYD3_k127_3070178_13 - - - - 0.000000000000000000000006605 106.0
SYD3_k127_3070178_14 PFAM Respiratory-chain NADH dehydrogenase 24 Kd subunit - - - 0.00000000000000000001065 104.0
SYD3_k127_3070178_2 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 547.0
SYD3_k127_3070178_3 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006069 451.0
SYD3_k127_3070178_4 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 439.0
SYD3_k127_3070178_5 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 325.0
SYD3_k127_3070178_6 Phosphoesterase family K21302 - 3.1.3.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 316.0
SYD3_k127_3070178_7 PFAM thiamine monophosphate synthase K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000000000000000203 204.0
SYD3_k127_3070178_8 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) - - - 0.000000000000000000000000000000000000000000000000003333 190.0
SYD3_k127_3070178_9 - - - - 0.000000000000000000000000000000000000000000000004977 183.0
SYD3_k127_3081884_0 COG0457 FOG TPR repeat - - - 3.351e-289 899.0
SYD3_k127_309099_0 Alpha-L-arabinofuranosidase K01209 - 3.2.1.55 9.842e-225 707.0
SYD3_k127_309099_1 TIGRFAM cysteine desulfurase family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005094 582.0
SYD3_k127_309099_2 phosphoenolpyruvate carboxylase activity K01595 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0008964,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0055114,GO:0071704,GO:0072350 4.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 481.0
SYD3_k127_309099_3 PFAM CBS domain K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005187 452.0
SYD3_k127_309099_4 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006157 350.0
SYD3_k127_309099_5 Flavin-binding monooxygenase-like - - - 0.00000000000000000000000000000000000000003559 157.0
SYD3_k127_309099_6 YjbR - - - 0.000000000000000000000000000000000000527 143.0
SYD3_k127_3091185_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005188 544.0
SYD3_k127_3106278_0 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004886 255.0
SYD3_k127_3106278_1 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000004306 188.0
SYD3_k127_3106278_2 Domain of unknown function (DUF697) K08990 - - 0.00000000000000000000000000000000000000000003184 174.0
SYD3_k127_3106278_3 EVE domain - - - 0.000000000000004737 76.0
SYD3_k127_3110260_0 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000002808 188.0
SYD3_k127_3110260_1 Protein of unknown function (DUF420) K08976 - - 0.000000000000000000000000000000000000000000003704 175.0
SYD3_k127_3110260_2 Threonine dehydratase K01754 - 4.3.1.19 0.00000000000000000000000000000000000002057 147.0
SYD3_k127_3150098_0 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 1.167e-231 724.0
SYD3_k127_3150098_1 signal transduction histidine kinase - - - 4.354e-223 706.0
SYD3_k127_3150098_2 stress-induced mitochondrial fusion - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 577.0
SYD3_k127_3150098_3 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 394.0
SYD3_k127_3150098_4 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000008844 237.0
SYD3_k127_3150098_5 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000001045 212.0
SYD3_k127_3150098_6 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000003027 133.0
SYD3_k127_3150098_7 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000003042 115.0
SYD3_k127_3152389_0 PFAM TadE family protein K02282 - - 0.000000000000000000000006108 106.0
SYD3_k127_3152389_1 TadE-like protein - - - 0.0000000000000000002056 93.0
SYD3_k127_3156928_0 DNA ligase K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 8.569e-203 647.0
SYD3_k127_3156928_1 PFAM Aminotransferase, class I K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006646 520.0
SYD3_k127_3156928_2 Cation efflux family K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009835 409.0
SYD3_k127_3156928_3 Protein of unknown function (DUF1385) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000768 395.0
SYD3_k127_3156928_4 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000004478 243.0
SYD3_k127_3156928_6 hyperosmotic response K04065 - - 0.0000002042 64.0
SYD3_k127_3169658_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1698.0
SYD3_k127_3169658_1 SAICAR synthetase K01923,K13713 - 6.3.2.6,6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008043 479.0
SYD3_k127_3169658_10 DinB family - - - 0.00000000000000000000000002015 115.0
SYD3_k127_3169658_11 YtxH-like protein - - - 0.0000000000000000000001321 105.0
SYD3_k127_3169658_12 oxidoreductase activity - - - 0.0000002059 63.0
SYD3_k127_3169658_13 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.00005114 50.0
SYD3_k127_3169658_2 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 401.0
SYD3_k127_3169658_3 Transcriptional regulator K03717 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 315.0
SYD3_k127_3169658_4 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000835 273.0
SYD3_k127_3169658_5 PFAM Colicin V production K03558 - - 0.0000000000000000000000000000000000000000000001654 173.0
SYD3_k127_3169658_6 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000002643 154.0
SYD3_k127_3169658_7 - - - - 0.0000000000000000000000000000000000000001222 157.0
SYD3_k127_3169658_8 Rnk N-terminus K06140 - - 0.000000000000000000000000000003089 124.0
SYD3_k127_3169658_9 Winged helix DNA-binding domain - - - 0.00000000000000000000000000009724 121.0
SYD3_k127_3176616_0 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004872 363.0
SYD3_k127_3176616_1 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 347.0
SYD3_k127_3176616_2 DinB superfamily - - - 0.000000000000000000000000000001222 126.0
SYD3_k127_3177233_0 Belongs to the ABC transporter superfamily K02031 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006966 287.0
SYD3_k127_3177233_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001051 273.0
SYD3_k127_3194421_0 Peptidase family M1 domain - - - 1.621e-217 706.0
SYD3_k127_3194421_1 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 508.0
SYD3_k127_3194421_2 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008911 431.0
SYD3_k127_3194421_3 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 364.0
SYD3_k127_3194421_4 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001044 241.0
SYD3_k127_3194421_5 Sigma factor PP2C-like phosphatases - - - 0.0000000000009652 72.0
SYD3_k127_3210804_0 Phage derived protein Gp49-like (DUF891) - - - 0.0000000000000000000000000000000001373 135.0
SYD3_k127_3210804_1 Helix-turn-helix domain - - - 0.00000000000000000004326 93.0
SYD3_k127_3233669_0 Histidine kinase K02482 - 2.7.13.3 0.0 1074.0
SYD3_k127_3233669_1 Bacterial regulatory protein, Fis family - - - 1.822e-236 739.0
SYD3_k127_3233669_10 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001491 237.0
SYD3_k127_3233669_11 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000000000000000000000000000006114 231.0
SYD3_k127_3233669_12 cellular response to heat K09807 - - 0.0000000000000000000000000000000000000000000000000000000000000491 224.0
SYD3_k127_3233669_13 Chemotaxis phosphatase CheX K03409 - - 0.000000000000000000000000000000000000000000000000000000000002289 214.0
SYD3_k127_3233669_14 Response regulator, receiver - - - 0.0000000000000000000000000000000000000000002498 162.0
SYD3_k127_3233669_15 Transcriptional regulator - - - 0.000000000000000000000000001568 131.0
SYD3_k127_3233669_16 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000006156 107.0
SYD3_k127_3233669_17 Gram-negative bacterial TonB protein C-terminal - - - 0.0000000000000002557 84.0
SYD3_k127_3233669_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 2.377e-236 749.0
SYD3_k127_3233669_3 CheR methyltransferase, all-alpha domain K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005815 505.0
SYD3_k127_3233669_4 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 436.0
SYD3_k127_3233669_5 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 396.0
SYD3_k127_3233669_6 Histidine Phosphotransfer domain K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 409.0
SYD3_k127_3233669_7 AAA ATPase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005403 368.0
SYD3_k127_3233669_8 Phospholipid methyltransferase K21310 - 2.1.1.334 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 317.0
SYD3_k127_3233669_9 protein-glutamate methylesterase activity K03412,K03413 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000002315 256.0
SYD3_k127_3237272_0 PFAM Type II secretion system protein E K02454,K02504,K02652 - - 2.225e-265 823.0
SYD3_k127_3238718_0 Voltage gated chloride channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006629 355.0
SYD3_k127_3238718_1 Thioesterase - - - 0.000000000000000000002479 98.0
SYD3_k127_3238718_2 beta-lactamase activity K07126 - - 0.0000000000000001795 86.0
SYD3_k127_3238718_3 - - - - 0.000000000009593 68.0
SYD3_k127_3258219_0 Glycosyl hydrolase family 57 - - - 1.978e-305 953.0
SYD3_k127_3258219_1 Permease, YjgP YjgQ - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 382.0
SYD3_k127_3272623_0 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K04756 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001557 245.0
SYD3_k127_3272623_1 YCII-related domain - - - 0.0000000000000000004615 96.0
SYD3_k127_3272681_0 PFAM transposase, IS4 family protein K07481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005377 422.0
SYD3_k127_329164_0 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 568.0
SYD3_k127_329164_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 381.0
SYD3_k127_329164_2 HAD-superfamily hydrolase, subfamily IIB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 341.0
SYD3_k127_329164_3 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002854 267.0
SYD3_k127_329164_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003546 272.0
SYD3_k127_329164_5 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004397 268.0
SYD3_k127_329164_6 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001017 243.0
SYD3_k127_329164_7 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001112 236.0
SYD3_k127_329164_8 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000003513 220.0
SYD3_k127_3401106_0 4 iron, 4 sulfur cluster binding - - - 3.103e-261 817.0
SYD3_k127_3401106_1 HD domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003801 492.0
SYD3_k127_3401106_2 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 354.0
SYD3_k127_3401106_3 PFAM Sodium calcium exchanger protein K07300 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008088 340.0
SYD3_k127_3401106_4 CoA enzyme activase uncharacterised domain (DUF2229) - - - 0.00000000000000000000000000000000000000000009892 164.0
SYD3_k127_3401106_5 - - - - 0.0000000000000000000000000000000000000001247 156.0
SYD3_k127_3401106_6 - - - - 0.000000001124 63.0
SYD3_k127_341061_0 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001111 282.0
SYD3_k127_341061_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000002705 253.0
SYD3_k127_341061_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000003364 220.0
SYD3_k127_3417823_0 Beta-galactosidase - - - 0.0 1120.0
SYD3_k127_3417823_1 Polysaccharide biosynthesis protein - - - 0.000000000001128 70.0
SYD3_k127_3418465_0 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 538.0
SYD3_k127_3418465_1 Chemoreceptor zinc-binding domain - - - 0.000000000000000000000855 101.0
SYD3_k127_3433471_0 Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 505.0
SYD3_k127_3433471_1 Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000433 245.0
SYD3_k127_3433471_2 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily K03976 - - 0.000000000000000000000000000000000000000000000000000000000000000003677 231.0
SYD3_k127_3433471_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000002215 228.0
SYD3_k127_3433471_4 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000003454 188.0
SYD3_k127_3433471_5 phytanoyl-CoA dioxygenase - - - 0.000000000000000000000000000000000000000000000000209 185.0
SYD3_k127_3433471_6 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000001704 185.0
SYD3_k127_3433471_7 domain, Protein K02450,K07126,K15539 - - 0.00000000000000000000000000000000000000000002951 179.0
SYD3_k127_3433471_8 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000004036 162.0
SYD3_k127_3433471_9 DsrE/DsrF-like family K06039 - - 0.0000000000000000000000000000012 125.0
SYD3_k127_3473001_0 Tetratricopeptide repeat - - - 5.67e-205 652.0
SYD3_k127_3473001_1 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 456.0
SYD3_k127_3473001_2 glycolate biosynthetic process K01560,K07025 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 347.0
SYD3_k127_3481144_0 Transcription termination factor nusG - - - 0.00000000000000000000000000000000000000004564 158.0
SYD3_k127_3481144_1 Polysaccharide biosynthesis/export protein K01991 - - 0.000000000000000000000000000000003845 139.0
SYD3_k127_3481144_2 beta-galactosidase activity K12308 - 3.2.1.23 0.00002315 47.0
SYD3_k127_3583473_0 Carboxypeptidase regulatory-like domain - - - 0.0 1032.0
SYD3_k127_3583473_1 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 330.0
SYD3_k127_3583473_2 TIGRFAM hopanoid biosynthesis associated glycosyl transferase protein HpnI K00720 - 2.4.1.80 0.0000001712 53.0
SYD3_k127_360053_0 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 470.0
SYD3_k127_360053_1 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003022 285.0
SYD3_k127_360053_2 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000001652 257.0
SYD3_k127_360053_3 PFAM glycosyl transferase family 9 K02841 - - 0.00000000000000000000000000000000000000000000000000003631 194.0
SYD3_k127_360053_4 - - - - 0.0000000000000000000000000000000000000000000000000307 185.0
SYD3_k127_360053_5 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000000001244 182.0
SYD3_k127_372623_0 NeuB family K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008861 516.0
SYD3_k127_372623_1 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009266 370.0
SYD3_k127_372623_2 TOBE domain K02017 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 338.0
SYD3_k127_372623_3 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 336.0
SYD3_k127_372623_4 Molybdate ABC transporter K02018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 314.0
SYD3_k127_372623_5 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005,K13888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005363 300.0
SYD3_k127_372623_6 Protein involved in meta-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 287.0
SYD3_k127_372623_7 Rhomboid K19225 - 3.4.21.105 0.000000000000000000000000000000000000000000000000000000001414 220.0
SYD3_k127_378363_0 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 507.0
SYD3_k127_378363_1 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 454.0
SYD3_k127_378363_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 452.0
SYD3_k127_378363_3 Catalyzes the reversible oxidation of malate to oxaloacetate K00016 - 1.1.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007252 430.0
SYD3_k127_378363_4 Membrane - - - 0.000000000000000000000000000000000009156 139.0
SYD3_k127_378363_5 - - - - 0.0000000000000001726 82.0
SYD3_k127_378363_7 Purple acid Phosphatase, N-terminal domain - - - 0.0000105 55.0
SYD3_k127_3861245_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003117 346.0
SYD3_k127_386961_0 PFAM Glycosyl transferase family 2 - - - 7.482e-230 714.0
SYD3_k127_3921375_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 5.838e-210 659.0
SYD3_k127_3921375_1 Phosphoesterase family K01114 - 3.1.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004781 447.0
SYD3_k127_3921375_2 Uncharacterised conserved protein (DUF2156) K04567,K14205 - 2.3.2.3,6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004889 410.0
SYD3_k127_3921375_3 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 357.0
SYD3_k127_3921375_4 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001999 252.0
SYD3_k127_3921375_5 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 GO:0000287,GO:0003674,GO:0003824,GO:0004422,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006166,GO:0006177,GO:0006188,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032261,GO:0032263,GO:0032264,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0043094,GO:0043101,GO:0043167,GO:0043169,GO:0043173,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046040,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000005677 211.0
SYD3_k127_3921375_6 Lysylphosphatidylglycerol synthase TM region - - - 0.00000000000000000000000000000000000000000000001272 185.0
SYD3_k127_3921375_7 Uncharacterised conserved protein (DUF2156) - - - 0.000001401 59.0
SYD3_k127_39376_0 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 283.0
SYD3_k127_39376_1 Reverse transcriptase-like K03469 - 3.1.26.4 0.000000000000000000008116 97.0
SYD3_k127_39376_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000004601 81.0
SYD3_k127_3953416_0 PFAM glycosyl transferase family 39 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005104 550.0
SYD3_k127_39841_0 PFAM Type II secretion system protein E K02652 - - 1.793e-289 895.0
SYD3_k127_39841_1 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 580.0
SYD3_k127_39841_10 - - - - 0.00000000000000000000000000000000000000000000000001323 190.0
SYD3_k127_39841_11 Pilus assembly protein K02662 - - 0.000000000000000000000000000000000002416 146.0
SYD3_k127_39841_12 - K02664 - - 0.000000000000000000000000000000001019 136.0
SYD3_k127_39841_13 - - - - 0.0000000000000000000000000000004289 130.0
SYD3_k127_39841_14 Two component, sigma54 specific, transcriptional regulator, Fis family K13599 - - 0.0000000000000000000000000002149 114.0
SYD3_k127_39841_15 - - - - 0.00000000000000000000002374 101.0
SYD3_k127_39841_16 Prokaryotic N-terminal methylation motif K02650 - - 0.0000000002118 67.0
SYD3_k127_39841_2 PFAM Type II secretion system F domain K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 482.0
SYD3_k127_39841_3 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 399.0
SYD3_k127_39841_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004927 305.0
SYD3_k127_39841_5 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003637 303.0
SYD3_k127_39841_6 outer membrane lipoprotein carrier protein LolA K03634 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001043 280.0
SYD3_k127_39841_7 COG0349 Ribonuclease D K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008813 280.0
SYD3_k127_39841_8 Pilus assembly protein K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009593 261.0
SYD3_k127_39841_9 Belongs to the HesB IscA family - - - 0.0000000000000000000000000000000000000000000000000000003877 197.0
SYD3_k127_4007303_0 ABC transporter K02003,K09814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 318.0
SYD3_k127_4007303_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993,K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000001577 241.0
SYD3_k127_4007303_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000457 72.0
SYD3_k127_40144_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 7.128e-320 985.0
SYD3_k127_40144_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 1.855e-224 699.0
SYD3_k127_40144_2 Alpha-N-acetylglucosaminidase K01205 - 3.2.1.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003056 583.0
SYD3_k127_40144_3 PFAM DAHP synthetase I K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002785 389.0
SYD3_k127_40144_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007417 271.0
SYD3_k127_40144_5 Flavin reductase like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001169 248.0
SYD3_k127_40144_6 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.000000000000000000000000000000000000000000003583 168.0
SYD3_k127_40144_7 Thioredoxin-like - - - 0.00000000000000000000000000000000001929 141.0
SYD3_k127_40144_8 - - - - 0.0000000000000000000000000001714 123.0
SYD3_k127_40144_9 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.00000000000000000000000001069 109.0
SYD3_k127_406143_0 cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 408.0
SYD3_k127_406143_1 Oligopeptide transporter OPT - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006134 325.0
SYD3_k127_406143_2 Protein of unknown function (DUF1211) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 301.0
SYD3_k127_406143_3 - - - - 0.00000000000000000000000000000000000000000455 167.0
SYD3_k127_406143_4 Phosphoribosyl transferase domain - - - 0.00003749 51.0
SYD3_k127_4098640_0 ABC transporter K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005779 355.0
SYD3_k127_4098640_1 Yip1 domain - - - 0.000000000000000000000000000000000000000000000001436 185.0
SYD3_k127_4098640_2 Transcriptional regulator PadR-like family K10947 - - 0.0000000000000000000000000000000000000002542 154.0
SYD3_k127_4098640_3 Belongs to the aspartate glutamate racemases family K01779 - 5.1.1.13 0.0000000000000000000000000000000000000005243 150.0
SYD3_k127_4098640_4 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.0000000000000000000000001974 106.0
SYD3_k127_4104661_0 TIGRFAM Threonine synthase K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007234 404.0
SYD3_k127_4104661_1 Threonyl and Alanyl tRNA synthetase second additional domain K01872 - 6.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000488 305.0
SYD3_k127_411351_0 Oligopeptide transporter OPT - - - 1.496e-311 966.0
SYD3_k127_411351_1 NAD(P) transhydrogenase beta subunit K00325 - 1.6.1.2 4.889e-213 674.0
SYD3_k127_411351_10 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000002396 149.0
SYD3_k127_411351_11 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.0000000000000000000000000000001095 126.0
SYD3_k127_411351_12 PFAM NHL repeat containing protein - - - 0.0000000000000000000000006021 118.0
SYD3_k127_411351_2 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family - - - 2.365e-211 664.0
SYD3_k127_411351_3 - - - - 9.983e-206 647.0
SYD3_k127_411351_4 Alanine dehydrogenase/PNT, N-terminal domain K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005675 553.0
SYD3_k127_411351_5 Peptidase dimerisation domain K01270 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 488.0
SYD3_k127_411351_6 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000005334 247.0
SYD3_k127_411351_7 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000001169 214.0
SYD3_k127_411351_8 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 0.000000000000000000000000000000000000000000004674 163.0
SYD3_k127_411351_9 transferase activity, transferring acyl groups other than amino-acyl groups K03466 - - 0.00000000000000000000000000000000000000008328 165.0
SYD3_k127_4123360_0 MviN-like protein K03980 - - 4.368e-205 651.0
SYD3_k127_4123360_1 CoA binding domain K09181 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000568 544.0
SYD3_k127_4123360_2 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 415.0
SYD3_k127_4123360_3 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000153 269.0
SYD3_k127_4123360_4 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000000000000000000000000000000001265 230.0
SYD3_k127_4123360_5 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000001719 126.0
SYD3_k127_4123360_6 - - - - 0.0001228 47.0
SYD3_k127_4125205_0 Maltogenic Amylase, C-terminal domain K05343 - 3.2.1.1,5.4.99.16 0.0 1538.0
SYD3_k127_4125205_1 aldehyde oxidase and xanthine dehydrogenase a b hammerhead K11177 - 1.17.1.4 5.396e-278 869.0
SYD3_k127_4125205_10 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000002482 149.0
SYD3_k127_4125205_11 PFAM von Willebrand factor type A - - - 0.00000000000000000000000000000000002261 148.0
SYD3_k127_4125205_12 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000004295 137.0
SYD3_k127_4125205_2 PFAM Response regulator receiver domain K07713 - - 1.774e-246 767.0
SYD3_k127_4125205_3 Aldehyde dehydrogenase family - - - 1.948e-202 641.0
SYD3_k127_4125205_4 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 541.0
SYD3_k127_4125205_5 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 434.0
SYD3_k127_4125205_6 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009056 411.0
SYD3_k127_4125205_7 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 362.0
SYD3_k127_4125205_9 2Fe-2S -binding K13483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001996 261.0
SYD3_k127_412933_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 2.481e-265 827.0
SYD3_k127_412933_1 alpha-galactosidase activity K01189,K01204,K07407 - 3.2.1.22,3.2.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 564.0
SYD3_k127_412933_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 460.0
SYD3_k127_412933_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 377.0
SYD3_k127_412933_4 Sulfatase - - - 0.000000000000000000000000001054 128.0
SYD3_k127_412933_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000335 115.0
SYD3_k127_412933_6 Peptidase family M28 - - - 0.0000000000000000000000009509 109.0
SYD3_k127_412933_7 mttA/Hcf106 family K03117 - - 0.0000000000000000001878 93.0
SYD3_k127_4147886_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1509.0
SYD3_k127_4147886_1 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 6.003e-320 994.0
SYD3_k127_4147886_2 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 541.0
SYD3_k127_4147886_3 Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006885 373.0
SYD3_k127_4147886_4 cellular response to DNA damage stimulus - GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 - 0.0000000000000000000000000000000000000000000000000000000000000000000002137 244.0
SYD3_k127_4156524_0 Amino acid permease - - - 1.286e-302 945.0
SYD3_k127_4156524_1 AAA ATPase K07478 - - 1.923e-226 707.0
SYD3_k127_4156524_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002245 261.0
SYD3_k127_4156524_11 DUF218 domain - - - 0.0000000000000000000000000000000000000000000000000000000000006059 216.0
SYD3_k127_4156524_12 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000000000000000001187 188.0
SYD3_k127_4156524_2 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K03820 - - 2.838e-211 670.0
SYD3_k127_4156524_3 Dehydrogenase E1 component K11381 - 1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009187 509.0
SYD3_k127_4156524_4 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 492.0
SYD3_k127_4156524_5 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 357.0
SYD3_k127_4156524_6 HAD-hyrolase-like K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 315.0
SYD3_k127_4156524_7 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 308.0
SYD3_k127_4156524_8 Belongs to the SUA5 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 305.0
SYD3_k127_4156524_9 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004098 292.0
SYD3_k127_4161723_0 Sulfate permease family K03321 - - 2.962e-222 701.0
SYD3_k127_4161723_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005114 383.0
SYD3_k127_4161723_2 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.000000000000000000000000000000000000000000000000001393 183.0
SYD3_k127_4162344_0 Beta-galactosidase trimerisation domain K12308 - 3.2.1.23 1.789e-267 842.0
SYD3_k127_4162344_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 2.156e-230 721.0
SYD3_k127_4162344_10 Sel1-like repeats. K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009523 293.0
SYD3_k127_4162344_11 bacterial (prokaryotic) histone like domain K03530 - - 0.000000000000000000000000000000000000000000000002426 174.0
SYD3_k127_4162344_12 SMART Transcription regulator LuxR, C-terminal - - - 0.00000000000000000000000000000000000000000000155 179.0
SYD3_k127_4162344_13 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000001312 162.0
SYD3_k127_4162344_14 sigma factor antagonist activity K04757,K17752 - 2.7.11.1 0.000000000000000000000000000000000000003969 152.0
SYD3_k127_4162344_16 Transcriptional regulatory protein, C terminal - - - 0.00000000000000001503 83.0
SYD3_k127_4162344_17 Periplasmic component of the Tol biopolymer transport system K03641 - - 0.00000000001217 76.0
SYD3_k127_4162344_18 Cysteine-rich secretory protein family - - - 0.000000004029 64.0
SYD3_k127_4162344_2 aminopeptidase N - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 479.0
SYD3_k127_4162344_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006417 418.0
SYD3_k127_4162344_4 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 380.0
SYD3_k127_4162344_5 Periplasmic binding protein domain K10439 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 370.0
SYD3_k127_4162344_6 dUTPase K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 354.0
SYD3_k127_4162344_7 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004612 353.0
SYD3_k127_4162344_8 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002661 321.0
SYD3_k127_4162344_9 Peptidase M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000643 308.0
SYD3_k127_4165489_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1249.0
SYD3_k127_4165489_1 oligosaccharyl transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 306.0
SYD3_k127_4165489_2 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.00000000000000000766 84.0
SYD3_k127_4171228_0 Pfam:HxxPF_rpt - - - 0.0 1126.0
SYD3_k127_4189479_0 Belongs to the peptidase M16 family - - - 1.083e-199 629.0
SYD3_k127_4189479_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 445.0
SYD3_k127_4189479_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000001504 206.0
SYD3_k127_41979_0 Periplasmic or secreted lipoprotein - - - 0.00000000000000000000005003 111.0
SYD3_k127_4202056_0 Urocanase Rossmann-like domain K01712 - 4.2.1.49 0.0 1059.0
SYD3_k127_4202056_1 Belongs to the GSP D family K02453 - - 1.225e-288 906.0
SYD3_k127_4202056_2 PFAM Peptidase M1, membrane alanine aminopeptidase K01256,K08776 - 3.4.11.2 1.031e-266 846.0
SYD3_k127_4202056_3 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 3.42e-233 731.0
SYD3_k127_4202056_4 Amidohydrolase family K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004301 511.0
SYD3_k127_4202056_5 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002387 246.0
SYD3_k127_4202056_6 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000000000000000000000000000000000003327 214.0
SYD3_k127_4202056_7 Type II secretion system protein G K02456 - - 0.00000000000000000000000000000000000002223 148.0
SYD3_k127_4202056_8 PFAM Aminotransferase, class I - - - 0.000000000001005 72.0
SYD3_k127_4202056_9 Ami_3 K01448 - 3.5.1.28 0.0001354 53.0
SYD3_k127_4236054_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 6.583e-232 729.0
SYD3_k127_4236054_1 Sodium:solute symporter family - - - 6.293e-215 683.0
SYD3_k127_4236054_10 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007012 357.0
SYD3_k127_4236054_11 Integral membrane protein TerC family K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 361.0
SYD3_k127_4236054_12 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 314.0
SYD3_k127_4236054_13 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000000000000000000006218 212.0
SYD3_k127_4236054_14 DinB family - - - 0.0000000000000000000000000000000000000000000000000901 183.0
SYD3_k127_4236054_15 peptidyl-prolyl cis-trans isomerase activity K03771 - 5.2.1.8 0.0000000000000000000000000244 121.0
SYD3_k127_4236054_16 Domain of unknown function (DUF1844) - - - 0.00000000000000000001824 93.0
SYD3_k127_4236054_17 Glutaredoxin - - - 0.00000000000001608 74.0
SYD3_k127_4236054_18 Cytochrome c, class I K07245 - - 0.0000000001314 67.0
SYD3_k127_4236054_2 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 614.0
SYD3_k127_4236054_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008095 473.0
SYD3_k127_4236054_4 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 423.0
SYD3_k127_4236054_5 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005042 412.0
SYD3_k127_4236054_6 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009401 401.0
SYD3_k127_4236054_7 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 375.0
SYD3_k127_4236054_8 Aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 374.0
SYD3_k127_4236054_9 spore germination - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005511 362.0
SYD3_k127_4244772_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 1.253e-214 671.0
SYD3_k127_4244772_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 593.0
SYD3_k127_4244772_2 Peptidase family M50 K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000298 494.0
SYD3_k127_4244772_3 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007085 469.0
SYD3_k127_4244772_4 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008591 274.0
SYD3_k127_4244772_5 Belongs to the CDS family K00981 GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000004862 220.0
SYD3_k127_4244772_6 Psort location Extracellular, score - - - 0.00000000000000000000000000000000000000000002589 175.0
SYD3_k127_4244772_7 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000003205 160.0
SYD3_k127_4244772_8 Cysteine-rich secretory protein family - - - 0.00000000000000000000000000000001205 132.0
SYD3_k127_4244772_9 Cysteine-rich secretory protein family - - - 0.000000007106 60.0
SYD3_k127_4254527_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009102 529.0
SYD3_k127_4254527_1 Putative zincin peptidase - - - 0.000000000000000000000000000000000000001375 155.0
SYD3_k127_4254527_2 Acetyltransferase (GNAT) family - - - 0.00000000003825 64.0
SYD3_k127_4257957_0 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 8.217e-309 960.0
SYD3_k127_4257957_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 6.8e-255 792.0
SYD3_k127_4257957_10 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000001187 188.0
SYD3_k127_4257957_11 Periplasmic protein induced by stress response via Cpx and BaeSR system K06006 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0008150,GO:0009987,GO:0010033,GO:0014070,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0044464,GO:0050896,GO:0051082,GO:0061077,GO:1990507 - 0.0001282 51.0
SYD3_k127_4257957_2 Mycolic acid cyclopropane synthetase K00574,K20238 - 2.1.1.317,2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 432.0
SYD3_k127_4257957_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07640 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006475 317.0
SYD3_k127_4257957_4 Phenazine biosynthesis protein, PhzF family K06998 - 5.3.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 301.0
SYD3_k127_4257957_5 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006551 292.0
SYD3_k127_4257957_6 PFAM response regulator receiver K07662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008889 289.0
SYD3_k127_4257957_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001072 287.0
SYD3_k127_4257957_8 phosphorelay sensor kinase activity K03406,K07675,K17763 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001765 273.0
SYD3_k127_4257957_9 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000007811 211.0
SYD3_k127_4271722_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002955 565.0
SYD3_k127_4271722_1 aminopeptidase activity K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003887 518.0
SYD3_k127_4271722_10 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 349.0
SYD3_k127_4271722_11 Glycine cleavage H-protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 330.0
SYD3_k127_4271722_12 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007263 264.0
SYD3_k127_4271722_13 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001671 248.0
SYD3_k127_4271722_14 Pyridoxamine 5'-phosphate oxidase like - - - 0.00000000000000000000000000000000000000000000000000000000008839 212.0
SYD3_k127_4271722_15 NAD(P)H-binding - - - 0.00000000000000000000000000000000000000000000000000000000009513 213.0
SYD3_k127_4271722_16 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.0000000000000000000000000000000000000000000001318 170.0
SYD3_k127_4271722_17 Transposase IS200 like K07491 - - 0.0000000000000000000000000000000000000249 148.0
SYD3_k127_4271722_18 - - - - 0.00000000000000000000000000000000000003666 152.0
SYD3_k127_4271722_19 Protein of unknown function (DUF962) - - - 0.0000000000000000000000000000002636 128.0
SYD3_k127_4271722_2 PFAM peptidase S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 473.0
SYD3_k127_4271722_20 - - - - 0.000000000001691 73.0
SYD3_k127_4271722_21 May be involved in the transport of PQQ or its precursor to the periplasm K00784 - 3.1.26.11 0.000006373 49.0
SYD3_k127_4271722_3 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009535 458.0
SYD3_k127_4271722_4 Molybdopterin dehydrogenase K11178 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 455.0
SYD3_k127_4271722_5 Phospholipase D. Active site motifs. K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 449.0
SYD3_k127_4271722_6 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 409.0
SYD3_k127_4271722_7 aldehyde oxidase and xanthine dehydrogenase a b hammerhead K11177 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 394.0
SYD3_k127_4271722_8 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 382.0
SYD3_k127_4271722_9 Putative neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 363.0
SYD3_k127_4283630_0 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 380.0
SYD3_k127_4283630_1 ArgK protein K07588 - - 0.00000001245 58.0
SYD3_k127_4293739_0 Transposase DDE domain - - - 1.481e-194 625.0
SYD3_k127_4293739_1 domain, Protein - - - 0.0000000000001424 76.0
SYD3_k127_4298633_0 PFAM peptidase M13 K01415 - 3.4.24.71 4.697e-274 859.0
SYD3_k127_4298633_1 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 4.836e-237 743.0
SYD3_k127_4298633_10 Protein of unknown function (DUF3891) - - - 0.000000000007786 75.0
SYD3_k127_4298633_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009616 492.0
SYD3_k127_4298633_3 PFAM glycoside hydrolase family 39 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004293 331.0
SYD3_k127_4298633_4 polysaccharide deacetylase K22278 - 3.5.1.104 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004044 297.0
SYD3_k127_4298633_5 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000001839 202.0
SYD3_k127_4298633_6 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000000009769 171.0
SYD3_k127_4298633_7 PFAM peptidase M13 K01415,K07386 - 3.4.24.71 0.00000000000000000000000000000000000000000001695 163.0
SYD3_k127_4298633_8 response to heat K07090 - - 0.0000000000000000000000000000000001145 136.0
SYD3_k127_4298633_9 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000004898 111.0
SYD3_k127_4300582_0 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.0000004722 51.0
SYD3_k127_4310632_0 TIGRFAM Hopanoid biosynthesis associated radical SAM protein HpnJ - - - 1.222e-274 849.0
SYD3_k127_4310632_1 Pyridoxal-dependent decarboxylase conserved domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 553.0
SYD3_k127_4310632_2 Peptidase M64 N-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 417.0
SYD3_k127_4310632_3 membrane - - - 0.00000000000000000000000000000000000000000000003298 173.0
SYD3_k127_4310632_4 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000098 173.0
SYD3_k127_4310632_5 membrane - - - 0.0000000000000000000000000000000000000001007 153.0
SYD3_k127_4328814_0 anaerobic respiration - - - 2.822e-225 706.0
SYD3_k127_4328814_1 PFAM Cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 575.0
SYD3_k127_4328814_2 ResB-like family K07399 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008185 493.0
SYD3_k127_4328814_3 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 441.0
SYD3_k127_4328814_4 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 435.0
SYD3_k127_4328814_5 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009678 403.0
SYD3_k127_4328814_6 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003786 314.0
SYD3_k127_4328814_7 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000000001169 214.0
SYD3_k127_4328814_8 DoxX - - - 0.0000000000000000000000000000000000000001199 154.0
SYD3_k127_4329470_0 Elongation factor G, domain IV K02355 - - 0.0 1180.0
SYD3_k127_4329470_1 Ferrous iron transport protein B K04759 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004803 388.0
SYD3_k127_4329470_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002215 278.0
SYD3_k127_4329470_3 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002088 257.0
SYD3_k127_4329470_4 peroxiredoxin activity K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000002028 169.0
SYD3_k127_4329470_5 peroxiredoxin activity K03564 - 1.11.1.15 0.000000000003955 68.0
SYD3_k127_4341642_0 CoA enzyme activase uncharacterised domain (DUF2229) - - - 0.0 1561.0
SYD3_k127_4341642_1 Fibronectin type III-like domain K05349 - 3.2.1.21 9.548e-294 917.0
SYD3_k127_4341642_2 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 383.0
SYD3_k127_4341642_4 Hemerythrin HHE cation binding domain - - - 0.000000000002436 75.0
SYD3_k127_4366700_0 PAS domain - - - 8.777e-219 692.0
SYD3_k127_4366700_1 Signal transducing histidine kinase, homodimeric domain K02487,K03407,K06596 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 530.0
SYD3_k127_4366700_11 nuclear chromosome segregation K02666,K03497,K19622 - - 0.000000000000000000005197 103.0
SYD3_k127_4366700_12 RESPONSE REGULATOR receiver - - - 0.000000000000000000321 93.0
SYD3_k127_4366700_13 - - - - 0.000000000000000002992 93.0
SYD3_k127_4366700_14 - - - - 0.000000000000006422 85.0
SYD3_k127_4366700_15 chemotaxis signal transduction protein K03408 - - 0.00000000000003146 80.0
SYD3_k127_4366700_16 Pyridoxal-dependent decarboxylase conserved domain - - - 0.0000000001311 62.0
SYD3_k127_4366700_17 PFAM response regulator receiver K02483,K07658,K07668 - - 0.000008563 57.0
SYD3_k127_4366700_18 Chemotaxis signal transduction protein K03408 - - 0.0001331 52.0
SYD3_k127_4366700_2 Protein kinase domain K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 347.0
SYD3_k127_4366700_3 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K02660,K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008125 340.0
SYD3_k127_4366700_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006215 316.0
SYD3_k127_4366700_5 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 293.0
SYD3_k127_4366700_7 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000001073 189.0
SYD3_k127_4366700_8 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000009108 173.0
SYD3_k127_4366700_9 cheY-homologous receiver domain K02658 - - 0.0000000000000000000000000000000001175 137.0
SYD3_k127_4386514_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 8.432e-231 738.0
SYD3_k127_4386514_1 TonB-dependent Receptor Plug Domain K02014,K16092 - - 2.037e-215 694.0
SYD3_k127_4386514_2 PFAM DNA photolyase, FAD-binding K01669 - 4.1.99.3 8.98e-211 664.0
SYD3_k127_4386514_3 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 407.0
SYD3_k127_4386514_4 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 361.0
SYD3_k127_4386514_5 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006734 280.0
SYD3_k127_4386514_6 Domain of unknown function (DUF374) K09778 - - 0.0000000000000000000000000000000000000000000000000000000001277 211.0
SYD3_k127_4386514_7 GGDEF domain - - - 0.000002217 57.0
SYD3_k127_4395807_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 4.044e-195 622.0
SYD3_k127_4395807_1 Peptidase family M49 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 581.0
SYD3_k127_4395807_2 Nucleic acid binding K03698 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 524.0
SYD3_k127_4395807_3 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 420.0
SYD3_k127_4395807_4 Peptidylprolyl isomerase K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 385.0
SYD3_k127_4395807_5 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 354.0
SYD3_k127_4395807_6 Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001039 261.0
SYD3_k127_4395807_7 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000002098 251.0
SYD3_k127_4395807_8 Cytochrome c - - - 0.0000000000000001829 83.0
SYD3_k127_4395807_9 Cytochrome c - - - 0.00000002536 60.0
SYD3_k127_4425635_0 ABC-type multidrug transport system ATPase and permease K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003484 503.0
SYD3_k127_4425635_1 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000007904 122.0
SYD3_k127_4425635_2 Adenylate cyclase K01768 - 4.6.1.1 0.000000003096 69.0
SYD3_k127_4425635_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000924 61.0
SYD3_k127_4425635_4 Carboxypeptidase regulatory-like domain - - - 0.000000635 57.0
SYD3_k127_4439103_0 ASPIC and UnbV - - - 0.0 1159.0
SYD3_k127_4439103_1 Cytochrome c554 and c-prime - - - 4.489e-259 811.0
SYD3_k127_4439103_10 PilZ domain - - - 0.0000000000000000000002022 102.0
SYD3_k127_4439103_11 SnoaL-like domain - - - 0.0000008996 57.0
SYD3_k127_4439103_2 Putative modulator of DNA gyrase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 592.0
SYD3_k127_4439103_3 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 335.0
SYD3_k127_4439103_4 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 313.0
SYD3_k127_4439103_5 Putative modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 291.0
SYD3_k127_4439103_6 Ferritin-like domain K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000002448 250.0
SYD3_k127_4439103_8 S23 ribosomal protein - - - 0.00000000000000000000000000000002231 130.0
SYD3_k127_4439103_9 Protein of unknown function (DUF3303) - - - 0.00000000000000000000000000004275 121.0
SYD3_k127_4442029_0 Amidohydrolase family - - - 6.855e-200 631.0
SYD3_k127_4442029_1 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004551 405.0
SYD3_k127_4442029_2 - - - - 0.00000007374 62.0
SYD3_k127_4450892_0 - - - - 0.00000000000000000000000000002511 130.0
SYD3_k127_4450892_1 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000729 102.0
SYD3_k127_4453188_0 Belongs to the aldehyde dehydrogenase family K00130,K00135,K00146,K22187 - 1.2.1.16,1.2.1.20,1.2.1.39,1.2.1.79,1.2.1.8 8.35e-258 802.0
SYD3_k127_4453188_1 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 512.0
SYD3_k127_4453188_11 MlaD protein K02067 - - 0.000000000131 68.0
SYD3_k127_4453188_12 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000001737 61.0
SYD3_k127_4453188_13 Cytochrome c - - - 0.000009527 51.0
SYD3_k127_4453188_2 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 396.0
SYD3_k127_4453188_3 Outer membrane lipoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008833 307.0
SYD3_k127_4453188_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 305.0
SYD3_k127_4453188_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000009563 230.0
SYD3_k127_4453188_6 TIGRFAM Methylglyoxal synthase K01734 - 4.2.3.3 0.0000000000000000000000000000000000000000000000000000000000001855 215.0
SYD3_k127_4453188_7 Calcineurin-like phosphoesterase K07098 - - 0.000000000000000000000000000000000000000000000000000000001188 207.0
SYD3_k127_4453188_9 TIGRFAM TonB K03832 - - 0.000000000000000009686 92.0
SYD3_k127_4491167_0 Type II/IV secretion system protein K02669 - - 1.314e-195 614.0
SYD3_k127_4491167_1 PFAM Type II secretion system F domain K02653 - - 0.00000000000000000000000000000000004278 135.0
SYD3_k127_4544285_0 PFAM Radical SAM - - - 3.102e-320 983.0
SYD3_k127_4544285_1 Belongs to the type-B carboxylesterase lipase family K03929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004776 613.0
SYD3_k127_4544285_10 - - - - 0.0000000000000000000000002932 112.0
SYD3_k127_4544285_11 - - - - 0.000000000000000000000004107 104.0
SYD3_k127_4544285_12 - - - - 0.00000000000000000003361 100.0
SYD3_k127_4544285_2 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004697 517.0
SYD3_k127_4544285_3 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 517.0
SYD3_k127_4544285_5 of the alpha beta superfamily K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003058 258.0
SYD3_k127_4544285_6 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002961 256.0
SYD3_k127_4544285_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001849 237.0
SYD3_k127_4544285_8 PFAM Histidine triad (HIT) protein K02503 - - 0.000000000000000000000000000000000000000000000006489 174.0
SYD3_k127_4544285_9 SnoaL-like domain - - - 0.000000000000000000000000000000000000000002063 163.0
SYD3_k127_4545551_0 Protein of unknown function DUF262 - - - 1.638e-202 641.0
SYD3_k127_4545551_1 COG3335 Transposase and inactivated derivatives K07494 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003053 497.0
SYD3_k127_4545551_2 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 419.0
SYD3_k127_4545551_3 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 332.0
SYD3_k127_4545551_4 - - - - 0.0000002806 56.0
SYD3_k127_4548315_0 Radical SAM K06937 - - 7.612e-256 801.0
SYD3_k127_4550536_0 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009076 350.0
SYD3_k127_4550536_1 Lactoylglutathione lyase - - - 0.000002193 56.0
SYD3_k127_458778_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00520,K21739 - 1.16.1.1 5.228e-216 679.0
SYD3_k127_458778_1 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000497 320.0
SYD3_k127_458778_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000002116 276.0
SYD3_k127_458778_3 Periplasmic or secreted lipoprotein - - - 0.00000000000000000000000000000000000000000000000001328 189.0
SYD3_k127_458778_4 beta-galactosidase activity K12308 - 3.2.1.23 0.000000000000000000000000000000000001647 156.0
SYD3_k127_458778_5 methyltransferase - - - 0.00000000000000000001335 91.0
SYD3_k127_4612462_0 choline dehydrogenase activity - - - 2.387e-300 927.0
SYD3_k127_4612462_1 Multicopper oxidase K22348 - 1.16.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006567 526.0
SYD3_k127_4612462_10 Outer membrane efflux protein K15725 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003526 330.0
SYD3_k127_4612462_11 Cytochrome oxidase assembly protein K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001087 269.0
SYD3_k127_4612462_12 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000000000004084 229.0
SYD3_k127_4612462_13 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000000000000000004817 220.0
SYD3_k127_4612462_16 palmitoyl-(protein) hydrolase activity K06999 - - 0.00000000000000000000000000000000000000000000000000000008477 213.0
SYD3_k127_4612462_19 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0004737 49.0
SYD3_k127_4612462_2 lipoprotein localization to outer membrane K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 487.0
SYD3_k127_4612462_3 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 460.0
SYD3_k127_4612462_4 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 380.0
SYD3_k127_4612462_5 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005034 385.0
SYD3_k127_4612462_6 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007162 366.0
SYD3_k127_4612462_7 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005846 355.0
SYD3_k127_4612462_8 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003255 339.0
SYD3_k127_4612462_9 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 316.0
SYD3_k127_4613730_0 peptidyl-prolyl cis-trans isomerase activity K00645,K01802,K02597,K03769,K03770,K03771 - 2.3.1.39,5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 311.0
SYD3_k127_4617444_0 Protein of unknown function, DUF255 K06888 - - 5.053e-229 717.0
SYD3_k127_4617444_1 Transglycosylase SLT domain K08309 - - 1.168e-211 681.0
SYD3_k127_4617444_10 Predicted membrane protein (DUF2306) - - - 0.00000000000000000000000000000000000000000000000000000000001181 216.0
SYD3_k127_4617444_11 Belongs to the Dps family K04047 - - 0.00000000000000000000000000000000000000000000000000002611 193.0
SYD3_k127_4617444_13 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000005759 174.0
SYD3_k127_4617444_14 Putative zinc-finger - - - 0.000000000000000000000000000000002099 130.0
SYD3_k127_4617444_15 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.00000000000000000000000000000438 123.0
SYD3_k127_4617444_16 PFAM Cupin 2 conserved barrel domain protein - - - 0.00000000000000000000000000005071 119.0
SYD3_k127_4617444_17 GCN5-related N-acetyl-transferase K06975 - - 0.0000000000000000000001447 99.0
SYD3_k127_4617444_18 - - - - 0.000000000000004164 80.0
SYD3_k127_4617444_19 Protein of unknown function (DUF1059) - - - 0.00006065 51.0
SYD3_k127_4617444_2 Permease family K06901 - - 1.269e-202 638.0
SYD3_k127_4617444_20 Domain of unknown function (DUF4440) - - - 0.0003029 50.0
SYD3_k127_4617444_3 Elongator protein 3, MiaB family, Radical SAM K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 601.0
SYD3_k127_4617444_4 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 558.0
SYD3_k127_4617444_5 PFAM peptidase K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005407 496.0
SYD3_k127_4617444_6 Peptidase M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003991 428.0
SYD3_k127_4617444_7 RNA polymerase sigma factor K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000543 352.0
SYD3_k127_4617444_8 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000002276 237.0
SYD3_k127_4617444_9 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000000000000000001297 229.0
SYD3_k127_465178_0 C-terminal, D2-small domain, of ClpB protein - - - 2.076e-210 659.0
SYD3_k127_4664885_0 GGDEF domain - - - 5.383e-216 698.0
SYD3_k127_4664885_1 Belongs to the beta-ketoacyl-ACP synthases family K14660 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009527 507.0
SYD3_k127_4664885_2 Serine aminopeptidase, S33 K01055 - 3.1.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000612 424.0
SYD3_k127_4664885_3 Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily K01897,K01911 - 6.2.1.26,6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000006457 276.0
SYD3_k127_4664885_4 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004879 253.0
SYD3_k127_4664885_5 Belongs to the thiolase family K00626,K07508 - 2.3.1.16,2.3.1.9 0.00000000000000000002215 93.0
SYD3_k127_4664885_6 Phosphopantetheine attachment site - - - 0.00000000000000001128 86.0
SYD3_k127_4664885_7 - - - - 0.000000000000004307 77.0
SYD3_k127_4728531_0 PFAM helix-turn-helix- domain containing protein AraC type - - - 0.000000000000000000000000000000000000000000000000000001302 203.0
SYD3_k127_4728531_1 Ribosomal RNA adenine dimethylase K05929 - 2.1.1.103 0.00000000000000007956 91.0
SYD3_k127_4728531_2 Phosphoethanolamine methyltransferase K05929 - 2.1.1.103 0.0000000000009961 78.0
SYD3_k127_4728531_3 Thioesterase-like superfamily K15315 - - 0.00001221 48.0
SYD3_k127_4779331_0 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001031 242.0
SYD3_k127_4779331_1 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000667 168.0
SYD3_k127_4789486_0 Iron-containing redox enzyme K06137 - 1.3.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 288.0
SYD3_k127_4789486_1 Protein of unknown function (DUF1572) - - - 0.00000000000000000000000000000000000000000000000000000000000000000377 233.0
SYD3_k127_4789486_2 Regulatory protein - - - 0.0000000000000000000000000000000000000000000003448 169.0
SYD3_k127_4833809_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0 1185.0
SYD3_k127_4833809_1 epimerase K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001813 277.0
SYD3_k127_4833809_2 Lactonase, 7-bladed beta-propeller - - - 0.00000017 63.0
SYD3_k127_4833809_3 - - - - 0.0006907 48.0
SYD3_k127_4836371_0 Sigma-54 interaction domain - - - 7.464e-227 709.0
SYD3_k127_4836371_1 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 332.0
SYD3_k127_494327_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.0 1035.0
SYD3_k127_494327_1 Involved in the tonB-independent uptake of proteins K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005525 418.0
SYD3_k127_494327_3 B12 binding domain K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000000000009813 229.0
SYD3_k127_494327_4 DNA replication, synthesis of RNA primer K04066 - - 0.000000000000000000000000000000000000000000000000000000000005798 222.0
SYD3_k127_494327_5 - - - - 0.000000000000000000000000000000000000000005619 157.0
SYD3_k127_494327_6 Amidinotransferase K01482 - 3.5.3.18 0.000000000000000000000000000001449 125.0
SYD3_k127_4962670_0 TonB-dependent Receptor Plug Domain - - - 0.0 1441.0
SYD3_k127_4962670_1 COGs COG4299 conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008583 426.0
SYD3_k127_4962670_2 histidine kinase dimerisation and phosphoacceptor region K11617 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 430.0
SYD3_k127_4962670_3 PFAM regulatory protein LuxR K02479 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004677 243.0
SYD3_k127_4962670_4 Belongs to the glycosyl hydrolase 30 family - - - 0.000000000000000000000000000000000000000000000002248 181.0
SYD3_k127_4973290_0 Beta-Casp domain K07576 - - 3.3e-235 739.0
SYD3_k127_4973290_1 Lipocalin-like domain K03098 - - 0.00000000000000000000000000000000000000000000000000001136 197.0
SYD3_k127_4973290_2 Aminotransferase class-III K00823 - 2.6.1.19 0.00000000000000000000000000000000000000000000000001942 182.0
SYD3_k127_4973290_3 STAS domain K04749 - - 0.0000000000001447 75.0
SYD3_k127_5014211_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1031.0
SYD3_k127_5014211_1 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 481.0
SYD3_k127_5014211_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005326 392.0
SYD3_k127_5014211_3 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 336.0
SYD3_k127_5014211_4 Belongs to the UPF0234 family K09767 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001134 250.0
SYD3_k127_5014211_5 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.000000000000000000005086 93.0
SYD3_k127_5030277_0 Cytochrome c K08738 - - 0.000000000000000000000001469 108.0
SYD3_k127_5030277_1 Cytochrome c nitrite reductase pentaheme subunit K04013 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016491,GO:0016661,GO:0016662,GO:0019645,GO:0020037,GO:0022900,GO:0022904,GO:0030288,GO:0030313,GO:0031975,GO:0042279,GO:0042597,GO:0044237,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0097159,GO:0098809,GO:1901363 - 0.0001316 52.0
SYD3_k127_5035418_0 PFAM Cytochrome c assembly protein K02198 - - 9.325e-307 952.0
SYD3_k127_5035418_1 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002123 281.0
SYD3_k127_5035418_2 - - - - 0.00000000000000000000000000000000000000000000000000000000001642 215.0
SYD3_k127_5035418_3 subunit of a heme lyase K02200 - - 0.00000000000000000000000000000000000003271 148.0
SYD3_k127_5035418_4 PFAM response regulator receiver - - - 0.00000000000000000000000000000000002039 139.0
SYD3_k127_5035418_5 - - - - 0.000000000000000000000006164 104.0
SYD3_k127_5035418_6 Protein of unknown function (DUF2934) - - - 0.0002881 46.0
SYD3_k127_5083713_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004821 520.0
SYD3_k127_5083713_1 C4-type zinc ribbon domain K07164 - - 0.0000000000000000000000000000000000000000000000000000002026 200.0
SYD3_k127_510652_0 PEP-utilising enzyme, mobile domain K01006 - 2.7.9.1 8.715e-205 642.0
SYD3_k127_510652_1 diguanylate cyclase - - - 0.00000000000000000000000000000000002221 147.0
SYD3_k127_5121552_0 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000002275 160.0
SYD3_k127_5121552_1 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000764 107.0
SYD3_k127_5146115_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 332.0
SYD3_k127_5146115_1 Glycosyl transferase, family 2 - - - 0.000000000000000000000001901 106.0
SYD3_k127_5146115_2 Domain of unknown function (DUF4437) - - - 0.000004761 53.0
SYD3_k127_5158335_0 DUF1237 K09704 - - 7.002e-196 617.0
SYD3_k127_5158335_1 HI0933 family K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 325.0
SYD3_k127_5235774_0 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 373.0
SYD3_k127_5235774_1 Cellulose biosynthesis protein BcsQ K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 370.0
SYD3_k127_5235774_2 Metallo-beta-lactamase superfamily - - - 0.000000000000000000006643 98.0
SYD3_k127_526751_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 595.0
SYD3_k127_526751_1 GDP-mannose 4,6 dehydratase K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 388.0
SYD3_k127_5278281_0 MacB-like periplasmic core domain K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 565.0
SYD3_k127_5278281_1 Belongs to the ClpA ClpB family K03696 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 405.0
SYD3_k127_5278281_2 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003975 328.0
SYD3_k127_5315800_0 PFAM periplasmic binding protein LacI transcriptional regulator K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 425.0
SYD3_k127_5315800_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000001138 204.0
SYD3_k127_5315800_2 protein conserved in bacteria - - - 0.000000000000000000000000000000000000004298 147.0
SYD3_k127_5344752_0 PFAM TonB-dependent Receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004481 381.0
SYD3_k127_5344752_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004008 268.0
SYD3_k127_538583_0 AAA domain K16898 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003102 457.0
SYD3_k127_538583_1 Domain of unknown function (DUF4442) - - - 0.00000000000000000000104 94.0
SYD3_k127_5402155_0 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 486.0
SYD3_k127_5402155_1 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000001087 256.0
SYD3_k127_5402155_2 PFAM CheW domain protein K03408 - - 0.00000000000000000000000000000000000000000000000000001782 192.0
SYD3_k127_5402155_3 Metal-dependent phosphohydrolase - - - 0.000000000000000000000000000000000000000000001591 177.0
SYD3_k127_5402155_4 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.0000000000000000000000000000000000000000004993 162.0
SYD3_k127_5402155_5 cheY-homologous receiver domain K03412 - 3.1.1.61,3.5.1.44 0.0000000000000006654 79.0
SYD3_k127_5447930_0 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 - 1.1.1.42 5.382e-254 790.0
SYD3_k127_5447930_1 Mur ligase middle domain K02558 - 6.3.2.45 5.692e-217 683.0
SYD3_k127_5447930_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 535.0
SYD3_k127_5447930_3 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007326 405.0
SYD3_k127_5447930_4 LD-carboxypeptidase K01297 - 3.4.17.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 359.0
SYD3_k127_5447930_5 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009574 304.0
SYD3_k127_5447930_6 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 298.0
SYD3_k127_5447930_7 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000104 259.0
SYD3_k127_5447930_8 MgtC family K07507 - - 0.0000000000000000000000000000000000000000000000000000000000004823 220.0
SYD3_k127_5456413_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 7.286e-271 844.0
SYD3_k127_5456413_1 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004353 411.0
SYD3_k127_5456413_2 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 332.0
SYD3_k127_5456413_3 Gram-negative bacterial TonB protein C-terminal - - - 0.0000000000000000000008089 96.0
SYD3_k127_5467784_0 4Fe-4S dicluster domain K00184 - - 0.0 1061.0
SYD3_k127_5467784_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.008e-299 926.0
SYD3_k127_5467784_10 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.0000000000000000009049 89.0
SYD3_k127_5467784_11 response to antibiotic - - - 0.00001253 55.0
SYD3_k127_5467784_2 PFAM Polysulphide reductase, NrfD K00185 - - 1.884e-220 691.0
SYD3_k127_5467784_3 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 478.0
SYD3_k127_5467784_4 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 364.0
SYD3_k127_5467784_5 signal sequence binding K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 336.0
SYD3_k127_5467784_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005832 287.0
SYD3_k127_5467784_7 PFAM cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 286.0
SYD3_k127_5467784_8 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004282 256.0
SYD3_k127_5467784_9 Transcriptional regulatory protein, C terminal K02483,K07657 - - 0.00000000000000000000000000000000000000000000000000002145 191.0
SYD3_k127_5467914_0 Domain of unknown function (DUF3488) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 433.0
SYD3_k127_5467914_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000005437 238.0
SYD3_k127_5480090_0 ABC transporter, transmembrane K18890 - - 2.102e-296 921.0
SYD3_k127_5480090_1 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 1.654e-200 631.0
SYD3_k127_5480090_2 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 497.0
SYD3_k127_5480090_3 PFAM response regulator receiver K07665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001213 276.0
SYD3_k127_5480090_4 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000004333 252.0
SYD3_k127_5480090_5 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000001826 235.0
SYD3_k127_5480090_6 endonuclease III - - - 0.00000000000000000000000000000000000000000000000000000001426 207.0
SYD3_k127_5480090_7 GCN5-related N-acetyl-transferase K06975 - - 0.0000000000000000001287 91.0
SYD3_k127_5480553_0 Large family of predicted nucleotide-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 552.0
SYD3_k127_5480553_1 DEAD DEAH box helicase K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004358 497.0
SYD3_k127_5480553_2 PFAM Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009978 475.0
SYD3_k127_5480553_3 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005081 396.0
SYD3_k127_5480553_4 Putative zinc- or iron-chelating domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001166 236.0
SYD3_k127_5480553_5 - - - - 0.000000000000000000000000000000000000000000000000002747 190.0
SYD3_k127_5482286_0 ATP-dependent DNA helicase RecG K03655 - 3.6.4.12 3.995e-262 820.0
SYD3_k127_5482286_1 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 501.0
SYD3_k127_5482286_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009898 350.0
SYD3_k127_5482286_3 WD-40 repeat-containing protein - - - 0.0000000000000000000000000000000000007138 152.0
SYD3_k127_5482286_4 HEAT repeats - - - 0.000000000000000000000000000000000004329 144.0
SYD3_k127_5489033_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000004989 219.0
SYD3_k127_5489033_1 multi-organism process - - - 0.0000001827 59.0
SYD3_k127_5489033_2 peroxiredoxin activity K03564 - 1.11.1.15 0.000131 49.0
SYD3_k127_5503136_0 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007416 526.0
SYD3_k127_5503136_1 Kelch repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008157 402.0
SYD3_k127_5503136_2 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000002186 158.0
SYD3_k127_5534251_0 TIGRFAM Malto-oligosyltrehalose synthase K06044 - 5.4.99.15 0.0 1148.0
SYD3_k127_5534251_1 Peptidase family M1 domain - - - 1.488e-261 826.0
SYD3_k127_5534251_2 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 465.0
SYD3_k127_5534251_3 PFAM 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002148 355.0
SYD3_k127_5534251_4 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008158 308.0
SYD3_k127_5534251_5 - - - - 0.000000000000000000000000000000000000000001789 156.0
SYD3_k127_5534251_6 - - - - 0.00000000000006769 73.0
SYD3_k127_5534251_7 Hemerythrin HHE cation binding domain - - - 0.00000007287 60.0
SYD3_k127_5558262_0 TIGRFAM malto-oligosyltrehalose trehalohydrolase K01236 - 3.2.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 293.0
SYD3_k127_5558262_1 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000008688 220.0
SYD3_k127_5558262_2 protein secretion K03116 - - 0.000000008287 57.0
SYD3_k127_55711_0 Periplasmic or secreted lipoprotein - - - 0.0000000000000000000000000000000427 135.0
SYD3_k127_5575881_0 Belongs to the 'phage' integrase family. XerC subfamily K04763 - - 0.0000000000000000000000000000000000000000000000000000000000003266 216.0
SYD3_k127_5575881_1 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000003391 160.0
SYD3_k127_5577580_0 Tetratricopeptide repeat - - - 5.341e-271 852.0
SYD3_k127_5577580_1 Psort location CytoplasmicMembrane, score - - - 1.386e-261 819.0
SYD3_k127_5577580_2 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 503.0
SYD3_k127_5577580_3 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005339 359.0
SYD3_k127_5577580_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 359.0
SYD3_k127_5577580_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006055 321.0
SYD3_k127_5577580_6 - - - - 0.000000000000000000000000000004377 125.0
SYD3_k127_5585374_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 4.018e-261 811.0
SYD3_k127_5588794_0 Tetratricopeptide repeat - - - 0.0 1465.0
SYD3_k127_5588794_1 Glycosyl transferases group 1 - - - 2.322e-208 655.0
SYD3_k127_5588794_10 antisigma factor binding K04749 - - 0.0000000000000000000000000000000000000000000002588 175.0
SYD3_k127_5588794_12 - - - - 0.0000000000000000000000001553 114.0
SYD3_k127_5588794_13 - - - - 0.000000000000000000001692 99.0
SYD3_k127_5588794_14 Protein of unknown function (DUF2905) - - - 0.00000000000000001126 84.0
SYD3_k127_5588794_15 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B gamma epsilon subunits K16881 - 2.7.7.13,5.4.2.8 0.00000009073 64.0
SYD3_k127_5588794_2 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 599.0
SYD3_k127_5588794_3 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009477 580.0
SYD3_k127_5588794_4 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 539.0
SYD3_k127_5588794_5 polysaccharide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005626 454.0
SYD3_k127_5588794_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 339.0
SYD3_k127_5588794_7 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 298.0
SYD3_k127_5588794_8 DisA bacterial checkpoint controller nucleotide-binding K18672 GO:0003674,GO:0003824,GO:0004016,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0009975,GO:0016020,GO:0016021,GO:0016829,GO:0016849,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 2.7.7.85 0.00000000000000000000000000000000000000000000000000000000000000000006934 240.0
SYD3_k127_5588794_9 YbbR-like protein - - - 0.00000000000000000000000000000000000000000000000000000000001151 213.0
SYD3_k127_5600211_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 2.362e-299 924.0
SYD3_k127_5600211_1 PFAM peptidase U62 modulator of DNA gyrase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008428 593.0
SYD3_k127_5600211_2 TrkA-N domain K03455,K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 589.0
SYD3_k127_5600211_3 PFAM peptidase M48 Ste24p - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000551 372.0
SYD3_k127_5600211_4 PFAM peptidase U62 modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001494 280.0
SYD3_k127_5600211_5 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000000000000005018 165.0
SYD3_k127_5600211_6 - - - - 0.0000000000000000000000000000008722 124.0
SYD3_k127_5600211_7 - - - - 0.00000000000000000000000000001899 126.0
SYD3_k127_5623187_0 Glycosyl hydrolases family 15 - - - 1.092e-203 652.0
SYD3_k127_5623187_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009471 425.0
SYD3_k127_5623187_2 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005949 256.0
SYD3_k127_5623187_3 - - - - 0.0000000000000000000000000000000000000000000000000000000007728 205.0
SYD3_k127_5623187_4 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000657 63.0
SYD3_k127_5641750_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 2.304e-290 902.0
SYD3_k127_5641750_1 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001658 274.0
SYD3_k127_5641750_2 Type IV pilus biogenesis stability protein PilW - - - 0.000000000000000000000000000000006712 134.0
SYD3_k127_5641750_3 CotH kinase protein - - - 0.0000000000000000000000000839 109.0
SYD3_k127_5641750_4 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00666 - - 0.000000009491 58.0
SYD3_k127_5661070_0 Chitobiase/beta-hexosaminidase C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000335 251.0
SYD3_k127_5661070_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000001234 188.0
SYD3_k127_5661070_2 CHASE3 domain - - - 0.0000000000001948 81.0
SYD3_k127_5670067_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 385.0
SYD3_k127_5670067_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K16079 - - 0.00000000000000000000000000000000002938 143.0
SYD3_k127_5680529_0 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004696 601.0
SYD3_k127_5680529_1 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006694 539.0
SYD3_k127_5680529_2 Semialdehyde dehydrogenase K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 402.0
SYD3_k127_5680529_3 SAD/SRA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007447 244.0
SYD3_k127_5680529_4 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000000000000000000000000000003368 181.0
SYD3_k127_5680529_5 Lipopolysaccharide-assembly - - - 0.000000000000000000000000000000000000000000812 162.0
SYD3_k127_5680529_6 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000000000000000000001723 162.0
SYD3_k127_5680529_7 Transporter associated domain - - - 0.00000000000000000000000000000000358 134.0
SYD3_k127_5680529_8 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000000000001516 108.0
SYD3_k127_5680529_9 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000003215 68.0
SYD3_k127_571290_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 542.0
SYD3_k127_571290_1 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000001712 161.0
SYD3_k127_571290_2 - - - - 0.000000000000000000000005787 106.0
SYD3_k127_5734972_0 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000686 595.0
SYD3_k127_5734972_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 430.0
SYD3_k127_5734972_2 PA14 domain K05349 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003397 359.0
SYD3_k127_576349_0 Helix-turn-helix domain K21498 - - 0.000000000000000000000000000000000000000002275 156.0
SYD3_k127_576349_1 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.000000000000000000000000000000000000000003071 157.0
SYD3_k127_576349_2 - - - - 0.00000000000000000000000000005019 118.0
SYD3_k127_576349_3 - - - - 0.0000000000000006538 79.0
SYD3_k127_5776947_0 PFAM IstB domain protein ATP-binding protein - - - 0.00000000000000000000000000000000000000000000000007832 181.0
SYD3_k127_5786710_0 excinuclease ABC activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003623 496.0
SYD3_k127_5786710_1 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 280.0
SYD3_k127_5786710_2 DinB family - - - 0.0000000000000000000000000000000000000000000000000000000000002477 218.0
SYD3_k127_5786710_4 - - - - 0.000000000000001015 78.0
SYD3_k127_578711_0 Glycosyl-hydrolase 97 N-terminal K01187 - 3.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 599.0
SYD3_k127_578711_1 MobA-Related Protein K07141,K19190 - 1.1.1.328,2.7.7.76 0.00000000000000000000000000000000000000000000000000000000000000000000008678 245.0
SYD3_k127_578711_2 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000003376 238.0
SYD3_k127_5788900_0 Domain of unknown function (DUF2703) - - - 0.0000000000000000000000000000000000000000001516 164.0
SYD3_k127_5803290_0 Putative adhesin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 355.0
SYD3_k127_5820983_0 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000000000000000000000000000001746 197.0
SYD3_k127_5820983_1 amine dehydrogenase activity - - - 0.00000000000000000000000000000000002582 152.0
SYD3_k127_5820983_2 Chemotaxis phosphatase CheX K03409 - - 0.0000000000000000000002319 97.0
SYD3_k127_5866337_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 5.56e-200 629.0
SYD3_k127_5877585_0 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 4.241e-240 751.0
SYD3_k127_5877585_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 1.832e-232 730.0
SYD3_k127_5877585_10 TIGRFAM TonB K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 362.0
SYD3_k127_5877585_11 Thioredoxin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 308.0
SYD3_k127_5877585_12 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000966 272.0
SYD3_k127_5877585_13 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.000000000000000000000000000000000000000000000000000000000006233 211.0
SYD3_k127_5877585_14 Biotin-requiring enzyme - - - 0.00000000000000000000000000000000000000000000000000002076 195.0
SYD3_k127_5877585_15 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.00000000000000000000000000000000000000000000000000009271 192.0
SYD3_k127_5877585_16 Predicted membrane protein (DUF2207) - - - 0.000000000000000000000000000001856 134.0
SYD3_k127_5877585_17 Preprotein translocase, YajC K03210 - - 0.000000000000000000000000000002059 123.0
SYD3_k127_5877585_18 ATPases associated with a variety of cellular activities K06147 - - 0.000000000000000000000000004414 114.0
SYD3_k127_5877585_19 Hemerythrin hhe - - - 0.0000000000000000000000009709 110.0
SYD3_k127_5877585_2 PFAM Organic solvent tolerance protein K04744 - - 2.546e-221 704.0
SYD3_k127_5877585_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 1.551e-199 629.0
SYD3_k127_5877585_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006729 539.0
SYD3_k127_5877585_5 Peptidylprolyl isomerase K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 466.0
SYD3_k127_5877585_6 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 447.0
SYD3_k127_5877585_7 tRNA processing K06864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 419.0
SYD3_k127_5877585_8 MotA TolQ ExbB proton channel K03561,K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000306 404.0
SYD3_k127_5877585_9 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 372.0
SYD3_k127_5884260_0 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.0000000000000000000000000000000000000002963 150.0
SYD3_k127_5884260_1 - - - - 0.00000000000000000000002959 106.0
SYD3_k127_5884260_2 SPTR CopG domain protein DNA-binding domain protein - - - 0.0000000000002277 73.0
SYD3_k127_5884260_3 Glutathione-dependent formaldehyde-activating - - - 0.000000000001617 70.0
SYD3_k127_590896_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 2.893e-302 936.0
SYD3_k127_590896_1 Belongs to the tRNA nucleotidyltransferase poly(A) polymerase family - - - 2.547e-202 645.0
SYD3_k127_590896_2 Pyruvate ferredoxin oxidoreductase beta subunit C terminal K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004298 588.0
SYD3_k127_590896_3 DNA-directed DNA polymerase K02337 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 550.0
SYD3_k127_590896_4 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000902 455.0
SYD3_k127_590896_5 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 346.0
SYD3_k127_590896_6 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001679 259.0
SYD3_k127_590896_7 - - - - 0.00000000000000000000000000000000000000000000000000000000002202 209.0
SYD3_k127_590896_8 Haloacid dehalogenase-like hydrolase K07025 - - 0.0000000000000000000000000000000002899 140.0
SYD3_k127_5913366_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 5.825e-254 792.0
SYD3_k127_5913366_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002628 269.0
SYD3_k127_5913366_2 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000007095 125.0
SYD3_k127_5913366_3 Domain of unknown function (DUF4440) - - - 0.0000000000000000002913 93.0
SYD3_k127_5919569_0 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002585 476.0
SYD3_k127_5919569_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 382.0
SYD3_k127_5919569_2 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006925 365.0
SYD3_k127_5919569_3 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 315.0
SYD3_k127_5919569_4 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 302.0
SYD3_k127_5919569_5 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000000000000000006126 204.0
SYD3_k127_5919569_6 Domain of unknown function (DUF1330) - - - 0.000001824 53.0
SYD3_k127_5919569_7 TonB dependent receptor - - - 0.0001904 52.0
SYD3_k127_5967197_0 asparaginyl-tRNA synthetase K01893 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.22 0.0000000000000000000000000000000000000000481 153.0
SYD3_k127_5967197_1 Transposase - - - 0.000002466 57.0
SYD3_k127_6008039_0 Aspartate ammonia-lyase K01679,K01744 - 4.2.1.2,4.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 452.0
SYD3_k127_6008039_1 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007053 396.0
SYD3_k127_6008039_2 - - - - 0.0000000000000000000000000000000000000000000000000000001306 205.0
SYD3_k127_6057686_0 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005772 456.0
SYD3_k127_6057686_1 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000339 254.0
SYD3_k127_6058292_0 PFAM Major facilitator superfamily K08178 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003204 601.0
SYD3_k127_6058292_1 Glycosyl hydrolases family 32 K03332 - 3.2.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000582 498.0
SYD3_k127_6058292_2 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 367.0
SYD3_k127_6058292_3 Peptidase M48 K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000001532 236.0
SYD3_k127_6058292_4 Alginate export - - - 0.000000000000000000000000000000000000000000004313 181.0
SYD3_k127_6058292_5 Pfam:DUF162 K00782 - - 0.00000000000000000000000000000000000000000002133 170.0
SYD3_k127_6058292_7 Iron-sulfur cluster binding protein K18929 - - 0.0000009344 54.0
SYD3_k127_6103302_0 Oxidoreductase molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 397.0
SYD3_k127_6103302_1 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 316.0
SYD3_k127_6103302_2 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000245 263.0
SYD3_k127_6103302_3 nitric oxide dioxygenase activity K05916 - 1.14.12.17 0.000000000000000000000000000000000000000000000000000000000000000000005851 236.0
SYD3_k127_6104375_0 TIGRFAM Hopanoid biosynthesis associated radical SAM protein HpnH - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003609 283.0
SYD3_k127_6104375_1 Squalene-hopene cyclase C-terminal domain K06045 - 4.2.1.129,5.4.99.17 0.0000000000000000000000000000000000000000000000004066 177.0
SYD3_k127_6110000_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 522.0
SYD3_k127_6110000_1 Domain of unknown function (DUF4149) - - - 0.0000000000000000000000000000000000000000000000003791 179.0
SYD3_k127_6110000_2 - - - - 0.000000000000000000000000000000000000000000000003078 184.0
SYD3_k127_6110000_3 Peptidase family M48 K03799 - - 0.000000000000000000000000000000001043 131.0
SYD3_k127_6138728_0 PFAM glycosyl hydrolase - - - 1.485e-246 771.0
SYD3_k127_6138728_1 Pyridoxal-dependent decarboxylase conserved domain K01593,K01634 - 4.1.1.105,4.1.1.28,4.1.2.27 6.526e-224 702.0
SYD3_k127_6138728_2 Diguanylate cyclase - - - 0.000000000000000000009117 106.0
SYD3_k127_6138728_3 Sel1-like repeats. K07126 - - 0.00000000000004679 85.0
SYD3_k127_6138728_4 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.000000000003174 66.0
SYD3_k127_6148165_0 His Kinase A (phosphoacceptor) domain - - - 2.292e-244 798.0
SYD3_k127_6148165_1 Trypsin K04771 - 3.4.21.107 1.788e-217 686.0
SYD3_k127_6148165_2 Amidohydrolase family - - - 1.041e-214 683.0
SYD3_k127_6148165_3 Peptidase, M20 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 468.0
SYD3_k127_6148165_4 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 338.0
SYD3_k127_6148165_5 Mitochondrial small ribosomal subunit Rsm22 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008367 311.0
SYD3_k127_6148165_6 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000002108 186.0
SYD3_k127_6148165_7 AAA domain K00860 - 2.7.1.25 0.000000000000000000000000000000000000001545 153.0
SYD3_k127_6148165_8 Putative peptidoglycan binding domain - - - 0.000000000000000000000000000001638 126.0
SYD3_k127_6150826_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007564 425.0
SYD3_k127_6150826_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003194 265.0
SYD3_k127_6150826_2 Phage integrase family - - - 0.0000000000000000000000000000000001061 140.0
SYD3_k127_6150826_3 - - - - 0.0002572 51.0
SYD3_k127_6152963_0 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 586.0
SYD3_k127_6152963_1 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004544 367.0
SYD3_k127_6205587_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 589.0
SYD3_k127_6205587_1 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004396 371.0
SYD3_k127_6205587_2 - - - - 0.00000000000000000002215 93.0
SYD3_k127_6205587_3 - - - - 0.0000001406 57.0
SYD3_k127_6228852_0 acetyltransferase - - - 0.00000000000000000000000000000000000000000003407 165.0
SYD3_k127_6228852_1 Cytotoxic translational repressor of toxin-antitoxin stability system - - - 0.000000000000000000000000000000197 126.0
SYD3_k127_6228852_2 PFAM Phage derived protein Gp49-like (DUF891) - - - 0.0000000000000000000000000003745 115.0
SYD3_k127_6228852_3 Helix-turn-helix domain - - - 0.000000000000000000000000005969 114.0
SYD3_k127_6228852_4 Helix-turn-helix XRE-family like proteins K07726 - - 0.0000000000000000000000000756 108.0
SYD3_k127_6228852_5 - - - - 0.000000000000000000001669 100.0
SYD3_k127_6228852_6 Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000002173 61.0
SYD3_k127_6228852_7 HicA toxin of bacterial toxin-antitoxin, - - - 0.00000006228 54.0
SYD3_k127_6228852_8 Ntpase (Nacht family) - - - 0.0006156 49.0
SYD3_k127_6233599_0 Domain of unknown function (DUF4968) K01811 - 3.2.1.177 0.0 1127.0
SYD3_k127_6233599_1 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 535.0
SYD3_k127_6233599_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000003163 192.0
SYD3_k127_6238243_0 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000667 489.0
SYD3_k127_6238243_1 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002869 479.0
SYD3_k127_6238243_2 Bacterial Peptidase A24 N-terminal domain K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000002423 266.0
SYD3_k127_6238243_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000003922 209.0
SYD3_k127_6238243_4 BON domain - - - 0.0000000000000000000000000000000000000000000000000000000275 210.0
SYD3_k127_6238243_5 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000005349 173.0
SYD3_k127_6260020_0 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 2.818e-244 763.0
SYD3_k127_6287107_0 PFAM Uncharacterised BCR, COG1649 - - - 2.409e-239 742.0
SYD3_k127_6287107_1 Beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 421.0
SYD3_k127_6287107_2 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 300.0
SYD3_k127_6287107_4 PFAM Uncharacterised BCR, COG1649 - - - 0.000000000000000000000000001247 114.0
SYD3_k127_6287107_5 Cold shock K03704 - - 0.00000000000000000000000002725 108.0
SYD3_k127_6287107_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000005827 63.0
SYD3_k127_629555_0 PFAM natural resistance-associated macrophage protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 608.0
SYD3_k127_629555_1 Glycosyl transferase family group 2 K00720 - 2.4.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005203 363.0
SYD3_k127_629555_2 Belongs to the PdxS SNZ family K06215 - 4.3.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005263 337.0
SYD3_k127_629555_3 TIGRFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 295.0
SYD3_k127_629555_4 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004295 280.0
SYD3_k127_629555_5 PFAM 6-pyruvoyl tetrahydropterin K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000008179 241.0
SYD3_k127_629555_6 PFAM 6-pyruvoyl tetrahydropterin K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000002459 185.0
SYD3_k127_629555_7 Vitamin K epoxide reductase - - - 0.00000000000000000000000000000004617 130.0
SYD3_k127_629555_8 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000001825 102.0
SYD3_k127_6296482_0 Proton-conducting membrane transporter K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 390.0
SYD3_k127_6296482_1 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.000000000000001155 79.0
SYD3_k127_630817_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 515.0
SYD3_k127_630817_1 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009033 374.0
SYD3_k127_630817_10 Peptidoglycan-binding domain 1 protein - - - 0.00000002022 66.0
SYD3_k127_630817_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 344.0
SYD3_k127_630817_3 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000002447 222.0
SYD3_k127_630817_4 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000006718 204.0
SYD3_k127_630817_5 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.00000000000000000000000000000000000000000000000000001639 192.0
SYD3_k127_630817_6 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000003847 192.0
SYD3_k127_630817_7 antisigma factor binding K04749 - - 0.00000000000000000000000000000000004731 143.0
SYD3_k127_630817_8 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000001035 135.0
SYD3_k127_630817_9 - - - - 0.000000003148 62.0
SYD3_k127_6309706_0 glycosyl transferase family K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003787 589.0
SYD3_k127_6309716_0 glycosyl transferase family K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 589.0
SYD3_k127_6406518_0 PFAM Radical SAM - - - 4.289e-233 732.0
SYD3_k127_6406518_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000004741 59.0
SYD3_k127_6406518_2 phosphorelay signal transduction system - - - 0.00000005261 62.0
SYD3_k127_6451335_0 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 6.381e-203 634.0
SYD3_k127_6451335_1 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000000000009516 214.0
SYD3_k127_6505097_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004815 424.0
SYD3_k127_6505097_1 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000000000000000000000000000000043 206.0
SYD3_k127_6505220_0 3-isopropylmalate dehydratase activity K01681,K01703,K01704,K17749 - 4.2.1.3,4.2.1.33,4.2.1.35 2.588e-229 728.0
SYD3_k127_6505220_1 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 516.0
SYD3_k127_6505220_2 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006844 338.0
SYD3_k127_6505220_3 4Fe-4S dicluster domain K05524 - - 0.00000000000000000000000000000000000000000000003001 174.0
SYD3_k127_6506421_0 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 6.308e-247 773.0
SYD3_k127_6506421_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 1.24e-213 673.0
SYD3_k127_6506421_2 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 357.0
SYD3_k127_6506421_3 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004655 336.0
SYD3_k127_6506421_4 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005134 282.0
SYD3_k127_6506421_6 Proton-conducting membrane transporter K00343 - 1.6.5.3 0.00000000000000000000007678 100.0
SYD3_k127_6506421_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000003832 87.0
SYD3_k127_6506421_9 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.0000000001062 64.0
SYD3_k127_6509401_0 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 304.0
SYD3_k127_6509401_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000002895 257.0
SYD3_k127_6509401_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007113 238.0
SYD3_k127_6569847_0 Histidine kinase - - - 0.0 1414.0
SYD3_k127_6569847_1 response regulator, receiver - - - 2.411e-218 685.0
SYD3_k127_6569847_10 Protein of unknown function (DUF3494) - - - 0.000000000000000000000856 105.0
SYD3_k127_6569847_11 DinB superfamily - - - 0.000000000000000000001133 101.0
SYD3_k127_6569847_12 - - - - 0.0000000000001051 76.0
SYD3_k127_6569847_13 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059,K07124 - 1.1.1.100 0.000005754 49.0
SYD3_k127_6569847_14 - - - - 0.000009643 60.0
SYD3_k127_6569847_2 Cys/Met metabolism PLP-dependent enzyme K01739,K01758,K01760,K17217 - 2.5.1.48,4.4.1.1,4.4.1.2,4.4.1.8 1.122e-197 622.0
SYD3_k127_6569847_3 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 512.0
SYD3_k127_6569847_4 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007137 457.0
SYD3_k127_6569847_5 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 325.0
SYD3_k127_6569847_6 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000001921 216.0
SYD3_k127_6569847_7 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000005106 161.0
SYD3_k127_6569847_8 Polysaccharide biosynthesis/export protein K01991 - - 0.000000000000000000000000000000000000002813 150.0
SYD3_k127_6569847_9 - K21449 - - 0.0000000000000000000001336 115.0
SYD3_k127_657491_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 2.054e-286 897.0
SYD3_k127_657491_1 flagellar basal-body rod protein FlgG K02392 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 396.0
SYD3_k127_657491_10 Chemotaxis phosphatase CheX - - - 0.000000000000000000000000000001458 126.0
SYD3_k127_657491_11 Type III flagellar switch regulator (C-ring) FliN C-term K02417 - - 0.00000000000000000004075 100.0
SYD3_k127_657491_12 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016020,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901576,GO:1901661,GO:1901663 - 0.0000000000008722 78.0
SYD3_k127_657491_13 Role in flagellar biosynthesis K02420 - - 0.000001727 54.0
SYD3_k127_657491_2 flagellar motor switch protein FliM K02416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 329.0
SYD3_k127_657491_3 FlhB HrpN YscU SpaS Family K02401 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 304.0
SYD3_k127_657491_4 Plays a role in the flagellum-specific transport system K02419 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 297.0
SYD3_k127_657491_5 Sigma-70 region 3 K02405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004382 269.0
SYD3_k127_657491_6 Flagella basal body rod protein K02391,K02392 - - 0.00000000000000000000000000000000000000000000000000000000000000000009425 238.0
SYD3_k127_657491_7 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000000000000000004526 189.0
SYD3_k127_657491_8 flagellar biosynthetic protein FliR K02421 - - 0.0000000000000000000000000000000000000000001598 172.0
SYD3_k127_657491_9 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.00000000000000000000000000000000000000003009 160.0
SYD3_k127_659502_0 Belongs to the CinA family K03742 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 555.0
SYD3_k127_659502_1 2'-5' RNA ligase superfamily K01975 - 3.1.4.58 0.0000000000000000000000000000000000000000000000003029 183.0
SYD3_k127_659502_2 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000006092 152.0
SYD3_k127_659502_3 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000227 104.0
SYD3_k127_6686784_0 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006428 300.0
SYD3_k127_6686784_1 Uracil DNA glycosylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002252 253.0
SYD3_k127_6686784_2 Putative abortive phage resistance protein AbiGi, antitoxin - - - 0.000005153 56.0
SYD3_k127_6686784_3 - - - - 0.0005772 48.0
SYD3_k127_6690442_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 8.602e-225 709.0
SYD3_k127_6726005_0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 606.0
SYD3_k127_6726005_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000012 275.0
SYD3_k127_6726005_2 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000002028 237.0
SYD3_k127_6726005_3 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000916 193.0
SYD3_k127_6726005_4 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000006669 130.0
SYD3_k127_6738567_0 oxidoreductase activity - - - 0.00000000000000000000000000000000000000002283 171.0
SYD3_k127_6829299_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1424.0
SYD3_k127_6829299_1 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000008957 221.0
SYD3_k127_6829299_2 DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000001234 134.0
SYD3_k127_6829299_3 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000000000499 129.0
SYD3_k127_6829842_0 surface antigen variable number - - - 2.96e-322 1013.0
SYD3_k127_6829842_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 5.027e-287 920.0
SYD3_k127_6829842_2 Flagellar basal body protein FlaE K02390 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005202 347.0
SYD3_k127_6829842_3 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000001387 184.0
SYD3_k127_6867912_0 amino acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 396.0
SYD3_k127_6867912_1 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000178 223.0
SYD3_k127_6872148_0 argininosuccinate lyase K01755 - 4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009323 534.0
SYD3_k127_6872148_1 Acetyltransferase (GNAT) family K00619 - 2.3.1.1 0.00000000000000000000000000000000000000000000000001081 188.0
SYD3_k127_6904445_0 MAPEG family - - - 0.00000000000000000000000000000000000000000001595 165.0
SYD3_k127_6904445_1 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.00000000000000000000000000000000000002159 150.0
SYD3_k127_6904445_2 protein conserved in bacteria - - - 0.00000000000000000000000000000001785 133.0
SYD3_k127_6904445_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000001685 120.0
SYD3_k127_6904445_5 Glycerophosphoryl diester phosphodiesterase family K06653 - - 0.000000002 63.0
SYD3_k127_6904445_6 Glutathione-dependent formaldehyde-activating - - - 0.00000004758 60.0
SYD3_k127_6915672_0 ATPase BadF BadG BcrA BcrD type - - - 9.824e-304 962.0
SYD3_k127_6915672_1 YidE YbjL duplication domain protein K07085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005639 443.0
SYD3_k127_6915672_2 PFAM Integral membrane protein TerC K05794 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 382.0
SYD3_k127_6915672_3 4 iron, 4 sulfur cluster binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 376.0
SYD3_k127_6915672_4 Transcriptional regulator K03717 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 365.0
SYD3_k127_6915672_5 Glutaredoxin - - - 0.00003329 51.0
SYD3_k127_6915672_6 helix_turn_helix, mercury resistance K08365,K13638,K19591 - - 0.0002794 47.0
SYD3_k127_6919938_0 Belongs to the glycosyl hydrolase 57 family - - - 0.0 1064.0
SYD3_k127_6919938_1 Malate synthase K01638 - 2.3.3.9 3.336e-253 790.0
SYD3_k127_6919938_2 Isocitrate lyase family K01637 - 4.1.3.1 8.74e-206 647.0
SYD3_k127_6919938_3 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000000000000007501 256.0
SYD3_k127_6919938_4 IstB-like ATP binding protein K02315 - - 0.000000000000000000000000000000000000000000000000000000000796 208.0
SYD3_k127_6919938_5 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000000000000000000000000004145 184.0
SYD3_k127_6919938_6 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000000000000000000005414 166.0
SYD3_k127_6929815_0 Phosphate acyltransferases K00655,K01897 - 2.3.1.51,6.2.1.3 0.0 1083.0
SYD3_k127_6929815_1 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002378 449.0
SYD3_k127_6929815_2 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000006974 149.0
SYD3_k127_6929815_3 Belongs to the 'phage' integrase family. XerC subfamily K04763 - - 0.0000000000000000000000000002464 114.0
SYD3_k127_6946458_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006915 251.0
SYD3_k127_6946458_1 - - - - 0.0000000003739 70.0
SYD3_k127_6962458_0 Serine aminopeptidase, S33 K00433 - 1.11.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 479.0
SYD3_k127_6962458_1 Uncharacterized conserved protein (DUF2277) - - - 0.0000000004846 59.0
SYD3_k127_6963451_0 COG0582 Integrase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 387.0
SYD3_k127_6963451_1 nucleotidyltransferase activity - - - 0.00000000000000000000000000004946 120.0
SYD3_k127_6963451_2 Belongs to the 'phage' integrase family - - - 0.00000000000000001655 86.0
SYD3_k127_7010426_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 620.0
SYD3_k127_7010426_1 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 519.0
SYD3_k127_7010426_10 - - - - 0.0000000000003898 74.0
SYD3_k127_7010426_11 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.0000000000009285 72.0
SYD3_k127_7010426_2 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004382 486.0
SYD3_k127_7010426_3 Cytochrome C assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003839 370.0
SYD3_k127_7010426_4 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007663 317.0
SYD3_k127_7010426_5 synthase K01719 - 4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003602 310.0
SYD3_k127_7010426_6 transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000206 279.0
SYD3_k127_7010426_7 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000005883 246.0
SYD3_k127_7010426_8 Cytochrome P460 - - - 0.000000000000000000000000000000000000000000000000005218 183.0
SYD3_k127_7010426_9 - - - - 0.0000000000000000000001517 99.0
SYD3_k127_7013083_0 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 0.0 1077.0
SYD3_k127_7013083_1 Domain of unknown function (DUF4112) - - - 0.0000000000000000000000000000000000000000000000000000004836 197.0
SYD3_k127_7013083_2 PFAM Redoxin - - - 0.00000000000000000000000000000000000000000000000000002005 194.0
SYD3_k127_7013083_3 oxidation-reduction process - - - 0.00000000000000000000000000000000000000000000007078 173.0
SYD3_k127_7013083_4 - - - - 0.0000000000000000000001855 101.0
SYD3_k127_7013083_5 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000007151 59.0
SYD3_k127_7017240_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.645e-229 718.0
SYD3_k127_7017240_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006359 559.0
SYD3_k127_7017240_10 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006634 264.0
SYD3_k127_7017240_11 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000004273 253.0
SYD3_k127_7017240_12 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000000000000000000000004168 236.0
SYD3_k127_7017240_13 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000000000000000002007 222.0
SYD3_k127_7017240_14 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000000000000000000000000000000004615 222.0
SYD3_k127_7017240_15 binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000000000000000000000001172 220.0
SYD3_k127_7017240_16 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000000000000000000000001499 216.0
SYD3_k127_7017240_17 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.00000000000000000000000000000000000000000000000000000001056 201.0
SYD3_k127_7017240_18 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.000000000000000000000000000000000000000000000000001042 183.0
SYD3_k127_7017240_19 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000000000000000006773 173.0
SYD3_k127_7017240_2 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004574 514.0
SYD3_k127_7017240_20 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000000000000000000000000000000000000000003727 162.0
SYD3_k127_7017240_21 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000000000000000000006003 162.0
SYD3_k127_7017240_22 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000000000007559 147.0
SYD3_k127_7017240_23 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000000000000000005611 130.0
SYD3_k127_7017240_24 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000000000000000001645 132.0
SYD3_k127_7017240_25 Ribosomal protein L30 K02907 - - 0.00000000000000000000008499 100.0
SYD3_k127_7017240_26 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000000000004201 83.0
SYD3_k127_7017240_27 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000000000005891 77.0
SYD3_k127_7017240_3 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006232 408.0
SYD3_k127_7017240_4 Methionine aminopeptidase K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005237 402.0
SYD3_k127_7017240_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006331 337.0
SYD3_k127_7017240_6 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 307.0
SYD3_k127_7017240_7 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 293.0
SYD3_k127_7017240_8 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 288.0
SYD3_k127_7017240_9 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009751 268.0
SYD3_k127_7044472_0 DHH family K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 466.0
SYD3_k127_7044472_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000005338 145.0
SYD3_k127_7044472_2 Protein of unknown function (DUF503) K09764 - - 0.0000000000000000000000000000000000002105 142.0
SYD3_k127_7044472_3 TIGRFAM TonB K03832 - - 0.0000000000000000000004509 102.0
SYD3_k127_7044472_4 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00000000000000000002618 91.0
SYD3_k127_7045168_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07788 - - 0.0 1342.0
SYD3_k127_7045168_1 Anion-transporting ATPase K01551 - 3.6.3.16 5.353e-196 630.0
SYD3_k127_7045168_10 phosphorelay signal transduction system - - - 0.00000000000000000000000000008655 119.0
SYD3_k127_7045168_13 Sporulation related domain - - - 0.000000007852 57.0
SYD3_k127_7045168_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003528 557.0
SYD3_k127_7045168_3 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004961 503.0
SYD3_k127_7045168_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005284 480.0
SYD3_k127_7045168_5 SMART band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007441 363.0
SYD3_k127_7045168_6 Biotin-lipoyl like K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000359 339.0
SYD3_k127_7045168_8 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000003276 148.0
SYD3_k127_7045168_9 HAD superfamily, subfamily IIIB (Acid phosphatase) - - - 0.0000000000000000000000000000001239 128.0
SYD3_k127_7058692_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 538.0
SYD3_k127_7059209_0 CarboxypepD_reg-like domain - - - 0.0 1342.0
SYD3_k127_7059209_1 Delta-1-pyrroline-5-carboxylate dehydrogenase K00294 - 1.2.1.88 1.424e-250 785.0
SYD3_k127_7059209_10 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000006185 262.0
SYD3_k127_7059209_11 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000000000000000000000000000000000000000000000002974 237.0
SYD3_k127_7059209_12 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000000105 206.0
SYD3_k127_7059209_13 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000001846 206.0
SYD3_k127_7059209_14 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000001082 186.0
SYD3_k127_7059209_15 Putative prokaryotic signal transducing protein - - - 0.00000000000000000000000000000000000000000001503 170.0
SYD3_k127_7059209_16 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000004778 158.0
SYD3_k127_7059209_17 - - - - 0.00000000000000000000000000000000001147 139.0
SYD3_k127_7059209_18 PilZ domain - - - 0.000000000000000000000000000001886 123.0
SYD3_k127_7059209_19 Bacterial flagellin N-terminal helical region K02397 - - 0.00000000000000000000000001921 120.0
SYD3_k127_7059209_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 1.164e-230 720.0
SYD3_k127_7059209_22 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000255 57.0
SYD3_k127_7059209_23 Flagellar rod assembly protein muramidase FlgJ K02395,K08309 - - 0.0000139 52.0
SYD3_k127_7059209_3 aminopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005917 506.0
SYD3_k127_7059209_4 membrane protein (DUF2207) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 406.0
SYD3_k127_7059209_5 Periplasmic binding protein LacI transcriptional regulator K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002787 390.0
SYD3_k127_7059209_6 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 368.0
SYD3_k127_7059209_7 flagellar hook-associated protein K02396 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 340.0
SYD3_k127_7059209_8 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 322.0
SYD3_k127_7059209_9 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 293.0
SYD3_k127_707429_0 NUDIX domain - - - 0.00000000000000000000000000000000000000000000000008879 179.0
SYD3_k127_707429_2 aminopeptidase activity - - - 0.000000000003146 74.0
SYD3_k127_707429_3 Antibiotic biosynthesis monooxygenase - - - 0.0009013 48.0
SYD3_k127_7086966_0 Aminotransferase class-III K00823 - 2.6.1.19 4.878e-235 735.0
SYD3_k127_7086966_1 Domain of unknown function (DUF4921) K00965 - 2.7.7.12 1.859e-195 612.0
SYD3_k127_7086966_2 Pirin C-terminal cupin domain K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005535 419.0
SYD3_k127_7086966_3 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000000000000000000001056 154.0
SYD3_k127_7088312_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009422 374.0
SYD3_k127_7088312_1 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000002179 158.0
SYD3_k127_7123078_0 Aminotransferase class I and II - - - 3.339e-203 638.0
SYD3_k127_7123078_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007366 586.0
SYD3_k127_7123078_2 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 508.0
SYD3_k127_7123078_3 Histidine-specific methyltransferase, SAM-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005272 326.0
SYD3_k127_7123078_4 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000001146 150.0
SYD3_k127_7123078_5 Protein of unknown function (DUF1440) - - - 0.000000000000000000000000000000000002262 145.0
SYD3_k127_7123078_6 Helix-turn-helix domain - - - 0.000000000000000000000000000000009879 129.0
SYD3_k127_7125891_0 class II (D K K01893 - 6.1.1.22 6.562e-201 628.0
SYD3_k127_7125891_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007424 590.0
SYD3_k127_7125891_2 Arginase family K01476 - 3.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 499.0
SYD3_k127_7125891_3 Gaf domain K03832 - - 0.000000000000000000000045 113.0
SYD3_k127_7125891_4 Hemerythrin HHE cation binding domain - - - 0.0000000000000002073 80.0
SYD3_k127_7139210_0 TIGRFAM ornithine aminotransferase K00819 - 2.6.1.13 2.07e-226 705.0
SYD3_k127_7139210_1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000001327 175.0
SYD3_k127_7155507_0 CHASE3 domain - - - 2.055e-314 975.0
SYD3_k127_7155507_1 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 503.0
SYD3_k127_7155507_2 amidase activity K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 447.0
SYD3_k127_7155507_4 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007985 266.0
SYD3_k127_7155507_5 Response regulator, receiver K10819,K20975 - 2.7.13.3 0.0000000000000000000000000000000000000000000000001763 179.0
SYD3_k127_7155507_6 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000003694 169.0
SYD3_k127_7155507_7 Gas vesicle protein K - - - 0.000000000000000000000000000000000000000001211 160.0
SYD3_k127_7155507_8 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure - - - 0.00000000000000000000000000000000000005538 145.0
SYD3_k127_7155507_9 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth - - - 0.000000000000000000000000000000000002587 140.0
SYD3_k127_7173262_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000416 376.0
SYD3_k127_7173262_1 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007748 376.0
SYD3_k127_7173262_2 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 351.0
SYD3_k127_7173262_3 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001687 259.0
SYD3_k127_7173262_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000001516 237.0
SYD3_k127_7173262_5 NUDIX domain K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000004925 163.0
SYD3_k127_7173262_6 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.000000000000002285 85.0
SYD3_k127_7188809_0 Type II/IV secretion system protein K02669 - - 1.921e-212 664.0
SYD3_k127_7188809_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 481.0
SYD3_k127_7188809_2 RecX family K03565 - - 0.00000000000000000000000000000000000000000000000000000000009661 208.0
SYD3_k127_7188809_3 endonuclease III K01247 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000004622 208.0
SYD3_k127_7188809_4 DinB family - - - 0.00000000000000000000000000000000001031 142.0
SYD3_k127_7191586_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 4.791e-200 626.0
SYD3_k127_7191586_1 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006385 312.0
SYD3_k127_7191586_2 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000004453 198.0
SYD3_k127_7191586_3 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000001321 67.0
SYD3_k127_7216087_0 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 9.391e-230 733.0
SYD3_k127_7216087_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004679 357.0
SYD3_k127_7216087_2 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 333.0
SYD3_k127_7216087_3 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007038 276.0
SYD3_k127_7216087_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003578 256.0
SYD3_k127_7216087_5 Sucrose-6F-phosphate phosphohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000122 254.0
SYD3_k127_7216087_6 BON domain - - - 0.00000000000000000000000000000000000000000000000000000000000415 216.0
SYD3_k127_7216087_7 TIGRFAM Carbohydrate kinase, thermoresistant glucokinase K00851 - 2.7.1.12 0.00000000000000000000000000000000000000000000001451 175.0
SYD3_k127_7216997_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 361.0
SYD3_k127_7216997_1 Belongs to the HisA HisF family K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000004264 254.0
SYD3_k127_7216997_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000003683 70.0
SYD3_k127_7342010_0 Carboxypeptidase regulatory-like domain - - - 0.0 1272.0
SYD3_k127_7342010_1 FtsZ-dependent cytokinesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001878 525.0
SYD3_k127_7342010_10 isomerase activity K01821 - 5.3.2.6 0.00000000000000000000000002671 109.0
SYD3_k127_7342010_11 Sigma-70, region 4 K03088 - - 0.000000000000000000000004998 109.0
SYD3_k127_7342010_2 major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002612 477.0
SYD3_k127_7342010_3 helix_turn _helix lactose operon repressor K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 412.0
SYD3_k127_7342010_4 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 363.0
SYD3_k127_7342010_5 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 321.0
SYD3_k127_7342010_6 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 316.0
SYD3_k127_7342010_7 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004863 268.0
SYD3_k127_7342010_8 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006625 256.0
SYD3_k127_7342010_9 Belongs to the UPF0271 (lamB) family K07160 - - 0.000000000000000000000000000000000000000000000000000001423 209.0
SYD3_k127_7355772_0 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005457 361.0
SYD3_k127_7355772_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000537 358.0
SYD3_k127_7355772_10 PFAM sigma-70 region 2 domain protein K03088 - - 0.0000000000000000000000002213 117.0
SYD3_k127_7355772_11 Amidohydrolase family - - - 0.0000000000000000001292 91.0
SYD3_k127_7355772_12 Dehydrogenase E1 component - - - 0.0001328 54.0
SYD3_k127_7355772_2 Gram-negative bacterial TonB protein C-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 332.0
SYD3_k127_7355772_3 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007259 319.0
SYD3_k127_7355772_4 Ferritin-like domain K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005927 298.0
SYD3_k127_7355772_5 PFAM Short-chain dehydrogenase reductase SDR K00059,K03793 - 1.1.1.100,1.5.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003353 283.0
SYD3_k127_7355772_6 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000000000000000000001631 208.0
SYD3_k127_7355772_7 - - - - 0.000000000000000000000000000000000000000000000000000000005601 206.0
SYD3_k127_7355772_8 - - - - 0.00000000000000000000000000000000000000000000001462 175.0
SYD3_k127_7355772_9 RNA-binding S4 domain protein K04762 - - 0.0000000000000000000000000000000000000003019 154.0
SYD3_k127_7364617_0 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 502.0
SYD3_k127_7364617_1 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 451.0
SYD3_k127_7364617_2 Cytochrome c K08685 - 1.4.9.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 419.0
SYD3_k127_7364617_3 Tetratricopeptide repeat - - - 0.000001106 60.0
SYD3_k127_7374480_0 GXGXG motif K00265 - 1.4.1.13,1.4.1.14 0.0 2466.0
SYD3_k127_7374480_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1029.0
SYD3_k127_7374480_2 transcription factor binding K02584,K12146,K12266,K15836,K21009 GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0001150,GO:0001158,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035326,GO:0042802,GO:0043170,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2000142,GO:2000144,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003887 627.0
SYD3_k127_7374480_3 Phospholipase D. Active site motifs. K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 548.0
SYD3_k127_7374480_4 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006317 306.0
SYD3_k127_7374480_5 HlyD family secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001679 250.0
SYD3_k127_7374480_6 Domain of unknown function (DUF4136) - - - 0.00000000000000000000003934 107.0
SYD3_k127_7374480_7 - - - - 0.00000419 49.0
SYD3_k127_7378082_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 2.154e-229 738.0
SYD3_k127_7378082_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 469.0
SYD3_k127_7378082_10 PFAM glycosyl transferase family 9 K02841 - - 0.0000000000000000000000000000001704 125.0
SYD3_k127_7378082_12 - - - - 0.000000000000000000000000006666 112.0
SYD3_k127_7378082_2 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007934 428.0
SYD3_k127_7378082_3 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005004 421.0
SYD3_k127_7378082_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004197 309.0
SYD3_k127_7378082_5 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 297.0
SYD3_k127_7378082_6 outer membrane autotransporter barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006186 272.0
SYD3_k127_7378082_7 Phospholipid methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000003705 230.0
SYD3_k127_7378082_8 Deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000000005207 189.0
SYD3_k127_7378082_9 YCII-related domain K09780 - - 0.00000000000000000000000000000003739 130.0
SYD3_k127_7464031_0 Winged helix-turn helix - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 473.0
SYD3_k127_748710_0 Protein of unknown function (DUF520) K09767 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001915 263.0
SYD3_k127_748710_1 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.000000000000000000000000000000000000000000000002212 176.0
SYD3_k127_748710_2 Appr-1-p processing - - - 0.0000000000000000000000000000000000000001773 150.0
SYD3_k127_748718_0 Protein of unknown function (DUF520) K09767 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001332 263.0
SYD3_k127_748718_1 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.0000000000000000000000000000000000000000000000003062 177.0
SYD3_k127_748718_2 Appr-1-p processing - - - 0.0000000000000000000000000000000000000001773 150.0
SYD3_k127_7502647_0 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 5.45e-275 857.0
SYD3_k127_7502647_1 Rod shape-determining protein MreC K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003788 362.0
SYD3_k127_7502647_2 shape-determining protein MreD K03571 - - 0.000000000000000000000000000000000000000000000000000000000001347 213.0
SYD3_k127_7502647_3 cell shape determining protein MreB K03569 - - 0.0000000000000000000000000000000000002258 140.0
SYD3_k127_7502647_4 Domain of unknown function (DUF378) K09779 - - 0.000000000000003141 78.0
SYD3_k127_750970_0 Penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 4.4e-322 1000.0
SYD3_k127_750970_1 PhoD-like phosphatase, N-terminal domain K01113 - 3.1.3.1 2.257e-318 987.0
SYD3_k127_750970_2 tail specific protease K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000681 530.0
SYD3_k127_750970_3 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004304 372.0
SYD3_k127_750970_4 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 356.0
SYD3_k127_750970_5 PASTA domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000001424 208.0
SYD3_k127_750970_6 Methionine synthase B12-binding module cap domain protein K00548,K14084 - 2.1.1.13 0.00000000000000000000000000000000000000000000000000000003463 203.0
SYD3_k127_750970_7 COG0666 FOG Ankyrin repeat K06867 - - 0.0000000000000000000000000000000000000007141 168.0
SYD3_k127_750970_8 O-methyltransferase, family 2 - - - 0.0000000000000000000000001005 109.0
SYD3_k127_750970_9 Integrase core domain - - - 0.00005441 46.0
SYD3_k127_7598250_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 6.439e-201 631.0
SYD3_k127_7598250_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005701 486.0
SYD3_k127_7598250_2 TIGRFAM zinc-binding alcohol dehydrogenase family protein K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004896 287.0
SYD3_k127_7598250_3 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004437 284.0
SYD3_k127_7598250_4 Methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001645 285.0
SYD3_k127_7598250_5 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000002665 210.0
SYD3_k127_7598250_6 4Fe-4S binding domain K00176 - 1.2.7.3 0.00000000000000000000000000000000000000009487 153.0
SYD3_k127_7618801_0 Belongs to the UbiD family K03182 - 4.1.1.98 1.661e-235 733.0
SYD3_k127_7618801_1 alpha-L-arabinofuranosidase - - - 0.00004235 55.0
SYD3_k127_7623866_0 glycosyl transferase group 1 K00754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 585.0
SYD3_k127_7623866_1 Histidine kinase K02478 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004777 558.0
SYD3_k127_7623866_2 Threonyl and Alanyl tRNA synthetase second additional domain K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 426.0
SYD3_k127_7623866_3 - - - - 0.00000000000000000000000001879 113.0
SYD3_k127_7623866_4 DEAD DEAH box K03724 - - 0.0000000000000000000000004825 106.0
SYD3_k127_7632880_1 WLM domain K07043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002935 282.0
SYD3_k127_7632880_2 Protein of unknown function (DUF3616) - - - 0.00000000000009586 71.0
SYD3_k127_7696142_0 aminoacyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006994 573.0
SYD3_k127_7696142_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 374.0
SYD3_k127_7696142_2 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000004299 214.0
SYD3_k127_7754011_0 PFAM Ig domain protein group 2 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 364.0
SYD3_k127_7754011_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000003328 117.0
SYD3_k127_7772162_0 PFAM Glycoside hydrolase, family 20, catalytic core K12373 - 3.2.1.52 5.985e-210 665.0
SYD3_k127_7772162_1 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 2.662e-208 654.0
SYD3_k127_7781051_0 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 385.0
SYD3_k127_7781051_1 NADPH-dependent FMN reductase K19784 - - 0.000000000000000000000000002431 113.0
SYD3_k127_7792457_0 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 439.0
SYD3_k127_7792457_1 Tetratricopeptide repeat - - - 0.00008419 48.0
SYD3_k127_7792457_2 Toxic component of a toxin-antitoxin (TA) module. An RNase - GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006417,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016787,GO:0016788,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0034641,GO:0040008,GO:0043170,GO:0043207,GO:0044237,GO:0044238,GO:0044403,GO:0044419,GO:0045926,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051701,GO:0051704,GO:0051707,GO:0060255,GO:0065007,GO:0071704,GO:0075136,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:2000112,GO:2000113 - 0.0001609 47.0
SYD3_k127_7836402_0 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 1.992e-243 764.0
SYD3_k127_7836402_1 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006136 516.0
SYD3_k127_7836402_2 Protein kinase domain K08884 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 422.0
SYD3_k127_7836402_3 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000024 260.0
SYD3_k127_7836402_4 sodium:proton antiporter activity K03316 - - 0.000000000000000000000000000000000000000000002969 164.0
SYD3_k127_7848828_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000029 117.0
SYD3_k127_7848828_1 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000569 92.0
SYD3_k127_790659_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 593.0
SYD3_k127_790659_1 secretion system protein K02283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 561.0
SYD3_k127_790659_2 Belongs to the GSP D family K02280 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006872 334.0
SYD3_k127_790659_3 Type II secretion system K12510 - - 0.00000000000000000000000000000000000000000000000000000000003022 217.0
SYD3_k127_790659_4 Type II secretion system K12511 - - 0.000000000000000000000000000000000000000000000000000000001293 211.0
SYD3_k127_790659_5 flp pilus assembly protein CpaB K02279 - - 0.00000000000000000000000000000000000000000000000003653 188.0
SYD3_k127_790659_6 AAA domain K02282 - - 0.0000000000000000000000000001828 128.0
SYD3_k127_790659_7 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000001286 103.0
SYD3_k127_790659_8 tetR family - - - 0.00000000000000004234 82.0
SYD3_k127_790659_9 Putative Flp pilus-assembly TadE/G-like - - - 0.00001003 57.0
SYD3_k127_790882_0 PFAM Aminotransferase, class I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004639 444.0
SYD3_k127_790882_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007483 308.0
SYD3_k127_790882_2 - - - - 0.000000000000000000000000000005871 126.0
SYD3_k127_790882_3 Preprotein translocase SecG subunit K03075 - - 0.0000000000000000000000000109 113.0
SYD3_k127_7912713_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 589.0
SYD3_k127_7912713_1 UvrD/REP helicase N-terminal domain K03657,K07465 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000005318 234.0
SYD3_k127_7912713_2 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000000000000000000001029 188.0
SYD3_k127_7932025_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 495.0
SYD3_k127_7932025_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003483 265.0
SYD3_k127_7932025_2 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007626 273.0
SYD3_k127_7932025_3 Low affinity iron permease - - - 0.0000000000000000000000000000000000000000006064 162.0
SYD3_k127_7967207_0 Belongs to the glycosyl hydrolase 18 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 312.0
SYD3_k127_7979790_0 Histidine kinase K07636 - 2.7.13.3 8.031e-202 644.0
SYD3_k127_7979790_1 Belongs to the PstS family K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 509.0
SYD3_k127_7979790_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 471.0
SYD3_k127_7979790_3 Phosphate transport system permease protein PstA K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 398.0
SYD3_k127_7979790_4 negative regulation of phosphate transmembrane transport K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003458 268.0
SYD3_k127_7979790_5 Transcriptional regulatory protein, C terminal K02483,K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004 247.0
SYD3_k127_7979790_6 - - - - 0.0000000000000000000000000000000000000000000001901 186.0
SYD3_k127_8015887_0 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007553 522.0
SYD3_k127_8015887_1 Transporter, CPA2 family - - - 0.0000000000000000000000000000000000000000000000000000000001343 220.0
SYD3_k127_8015887_2 converts alpha-aldose to the beta-anomer - - - 0.000000000000000000000000000000000000000000000000000001648 204.0
SYD3_k127_8015887_3 short-chain dehydrogenase reductase K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009058,GO:0009403,GO:0009404,GO:0009987,GO:0016491,GO:0016614,GO:0018130,GO:0019438,GO:0019748,GO:0042469,GO:0043385,GO:0043386,GO:0044237,GO:0044249,GO:0044550,GO:0045460,GO:0045461,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901376,GO:1901378,GO:1901576 1.1.1.100 0.0000000001515 61.0
SYD3_k127_8015887_4 Trypsin K04771 - 3.4.21.107 0.000007085 58.0
SYD3_k127_8054506_0 Belongs to the GARS family K01945 - 6.3.4.13 7.794e-203 638.0
SYD3_k127_8054506_1 PFAM natural resistance-associated macrophage protein K03322 - - 3.385e-201 634.0
SYD3_k127_8054506_2 aconitate hydratase K01681 - 4.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 387.0
SYD3_k127_8054506_3 FeoA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004488 282.0
SYD3_k127_8054506_4 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000001386 231.0
SYD3_k127_8054506_5 DinB family - - - 0.000000000004183 77.0
SYD3_k127_8055325_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 2.369e-302 928.0
SYD3_k127_8055325_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 1.109e-217 679.0
SYD3_k127_8127583_0 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 535.0
SYD3_k127_8127583_1 Putative methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 497.0
SYD3_k127_8127583_2 Aspartyl asparaginyl beta-hydroxylase K12979 - - 0.0000000000000000000000000000000000006182 144.0
SYD3_k127_8127583_3 PFAM Rieske 2Fe-2S K00363 - 1.7.1.15 0.0000000000000000000000000000002993 127.0
SYD3_k127_8127583_4 - - - - 0.000000000000000000001113 100.0
SYD3_k127_8127583_5 - - - - 0.0000000000001605 80.0
SYD3_k127_8170928_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 482.0
SYD3_k127_8170928_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000004481 217.0
SYD3_k127_8170928_2 CYTH K05873 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000007604 193.0
SYD3_k127_8170928_3 protein-(glutamine-N5) methyltransferase activity K02493,K16868 - 2.1.1.265,2.1.1.297 0.0000000000000000000000000000000000001256 150.0
SYD3_k127_8171698_0 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 359.0
SYD3_k127_8171698_1 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 317.0
SYD3_k127_8171698_2 amino acid - - - 0.0000000000000000000000000000000000000000000000000000000000000009005 227.0
SYD3_k127_8171698_3 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000003073 189.0
SYD3_k127_8171698_4 DinB superfamily - - - 0.0000000000000000000000000000000000000000000001043 175.0
SYD3_k127_8171698_5 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000001421 160.0
SYD3_k127_8173565_0 Aldehyde dehydrogenase family K22445 - 1.2.99.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000099 614.0
SYD3_k127_8173565_1 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006327 585.0
SYD3_k127_8173565_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 395.0
SYD3_k127_8173565_3 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 365.0
SYD3_k127_8173565_4 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 333.0
SYD3_k127_8173565_5 - - - - 0.000000000000000002939 88.0
SYD3_k127_8184507_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008041 600.0
SYD3_k127_8184507_1 Thiopurine S-methyltransferase (TPMT) K00569 - 2.1.1.67 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 292.0
SYD3_k127_8184507_3 KTSC domain - - - 0.0000000000000000000000000000000000000000000362 162.0
SYD3_k127_8190948_0 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 1.781e-247 776.0
SYD3_k127_8190948_1 Protein of unknown function (DUF1343) - - - 1.146e-212 671.0
SYD3_k127_8190948_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005974 550.0
SYD3_k127_8190948_3 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 311.0
SYD3_k127_8190948_4 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007752 282.0
SYD3_k127_8190948_5 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001128 289.0
SYD3_k127_8190948_6 multi-organism process K03195 - - 0.0000000000000000000000000000000000000000000000000000000000000006851 226.0
SYD3_k127_8190948_7 membrane - - - 0.00000000000000001258 86.0
SYD3_k127_8196038_0 May be involved in recombinational repair of damaged DNA K03631 - - 3.64e-249 781.0
SYD3_k127_8196038_1 WD40-like Beta Propeller K03641 - - 2.824e-197 623.0
SYD3_k127_8196038_2 Squalene-hopene cyclase C-terminal domain K06045 - 4.2.1.129,5.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 516.0
SYD3_k127_8196038_3 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004863 506.0
SYD3_k127_8196038_4 MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 310.0
SYD3_k127_8196038_5 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 293.0
SYD3_k127_8196038_6 TonB C terminal K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008896 253.0
SYD3_k127_8196038_7 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.000000000000000000000000000000000000000000000001835 177.0
SYD3_k127_8196038_8 Domain of unknown function (DUF4139) - - - 0.00000000000000000000000000000000009152 136.0
SYD3_k127_8216973_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 2.04e-213 668.0
SYD3_k127_8216973_1 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 482.0
SYD3_k127_8216973_2 C4-type zinc ribbon domain K07164 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009449 256.0
SYD3_k127_8216973_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000000000000007745 205.0
SYD3_k127_8216973_4 Fibronectin type 3 domain - - - 0.0000000000000000005188 92.0
SYD3_k127_822381_0 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 479.0
SYD3_k127_822381_1 Electron transfer flavoprotein domain K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 427.0
SYD3_k127_822381_2 - - - - 0.0000000000000000000000000000000000000000000005937 167.0
SYD3_k127_822381_3 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000001043 113.0
SYD3_k127_8239073_0 DNA polymerase X family K02347 - - 5.687e-284 881.0
SYD3_k127_8239073_1 efflux transmembrane transporter activity - - - 2.89e-248 790.0
SYD3_k127_8239073_10 Domain of unknown function (DUF2520) - - - 0.00000000000000000000000000000000000000000000000000000000000000697 230.0
SYD3_k127_8239073_11 NmrA-like family K19267 - 1.6.5.2 0.000000000000000000000000000000000000000000000000003943 191.0
SYD3_k127_8239073_12 - - - - 0.0000000000000000000000000000000000003238 147.0
SYD3_k127_8239073_13 Cold shock protein K03704 - - 0.00000000000000000000000000000008925 124.0
SYD3_k127_8239073_14 Sortase family K07284 - 3.4.22.70 0.0000000000000000000000000000001125 132.0
SYD3_k127_8239073_2 PFAM peptidase - - - 1.543e-246 766.0
SYD3_k127_8239073_3 Peptidase family M1 domain - - - 1.365e-243 777.0
SYD3_k127_8239073_4 Glutamate-ammonia ligase adenylyltransferase K00982 - 2.7.7.42,2.7.7.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 454.0
SYD3_k127_8239073_5 4Fe-4S single cluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 349.0
SYD3_k127_8239073_6 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 321.0
SYD3_k127_8239073_7 PFAM FAD dependent oxidoreductase K03153 - 1.4.3.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004129 312.0
SYD3_k127_8239073_8 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008597 265.0
SYD3_k127_8239073_9 NUDIX domain K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000001337 237.0
SYD3_k127_8242667_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009468 522.0
SYD3_k127_8242667_1 Phage portal protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 522.0
SYD3_k127_8242667_2 - - - - 0.00000000000000000000000000000000000000000000000000000114 196.0
SYD3_k127_8242667_3 Protein of unknown function (DUF3037) - - - 0.00000000000000000000000000000000000000002342 163.0
SYD3_k127_8242667_4 - - - - 0.00000000000000000000009683 98.0
SYD3_k127_8242667_6 - - - - 0.000000000000003649 79.0
SYD3_k127_8258035_0 dead deah K03724 - - 0.0 1474.0
SYD3_k127_8258060_0 - - - - 0.0000000000000000000000000000000000001505 144.0
SYD3_k127_830647_0 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 393.0
SYD3_k127_830647_1 PFAM Glycoside hydrolase family 2 K01192 - 3.2.1.25 0.00000000000001334 76.0
SYD3_k127_8309837_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008611 434.0
SYD3_k127_8309837_1 PFAM von Willebrand factor type A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 433.0
SYD3_k127_8309837_2 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000869 373.0
SYD3_k127_8309837_3 von Willebrand factor (vWF) type A domain - - - 0.000000000000008146 81.0
SYD3_k127_8309837_4 Superinfection immunity protein - - - 0.00000000001327 70.0
SYD3_k127_8310992_0 domain protein - - - 0.0 1140.0
SYD3_k127_8310992_1 Putative zinc-binding metallo-peptidase - - - 9.606e-214 664.0
SYD3_k127_8310992_2 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 2.243e-194 612.0
SYD3_k127_8323897_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 4.306e-305 947.0
SYD3_k127_8323897_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 1.584e-215 674.0
SYD3_k127_8323897_2 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 419.0
SYD3_k127_8323897_3 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000352 413.0
SYD3_k127_8323897_4 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 373.0
SYD3_k127_8323897_5 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005911 304.0
SYD3_k127_8324540_0 Condensation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003865 407.0
SYD3_k127_8331029_0 PFAM Glycoside hydrolase 97 K01187,K21574 - 3.2.1.20,3.2.1.3 0.0 1163.0
SYD3_k127_8331029_1 PFAM transferase hexapeptide repeat containing protein K00661 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008374,GO:0008925,GO:0009987,GO:0016043,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0022607,GO:0042802,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071840 2.3.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 330.0
SYD3_k127_8333707_0 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 335.0
SYD3_k127_8333707_1 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000638 155.0
SYD3_k127_8333707_2 OsmC-like protein K04063 - - 0.0000000000000000000007014 101.0
SYD3_k127_8337009_0 Bacterial regulatory protein, Fis family - - - 6.09e-226 708.0
SYD3_k127_8337009_1 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 - 1.1.1.25,4.2.1.10 4.956e-209 662.0
SYD3_k127_8337009_10 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000000000000000000000000000000000000000000000000000009296 238.0
SYD3_k127_8337009_11 aminopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000001237 217.0
SYD3_k127_8337009_13 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000000001838 182.0
SYD3_k127_8337009_14 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000000000000000000000000000000000000000001657 161.0
SYD3_k127_8337009_15 Ribosomal L32p protein family K02911 - - 0.0000000000000000000000000009839 112.0
SYD3_k127_8337009_2 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 2.015e-202 636.0
SYD3_k127_8337009_3 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 514.0
SYD3_k127_8337009_4 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 499.0
SYD3_k127_8337009_5 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005872 475.0
SYD3_k127_8337009_6 Protein involved in outer membrane biogenesis K07289,K07290 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0032386,GO:0032879,GO:0032880,GO:0033157,GO:0044464,GO:0050789,GO:0051049,GO:0051223,GO:0060341,GO:0065007,GO:0070201,GO:0071944,GO:0090087,GO:0090313,GO:1903533,GO:1903827,GO:1905475 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003968 494.0
SYD3_k127_8337009_7 Helix-hairpin-helix class 2 (Pol1 family) motifs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 413.0
SYD3_k127_8337009_8 Gas vesicle - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 349.0
SYD3_k127_8337009_9 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 322.0
SYD3_k127_8347783_0 Sigma-54 interaction domain K15836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005652 507.0
SYD3_k127_8347783_1 Glycosyltransferase family 20 K00697 - 2.4.1.15,2.4.1.347 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 441.0
SYD3_k127_8347783_10 - - - - 0.000004496 55.0
SYD3_k127_8347783_11 peptidyl-tyrosine sulfation - - - 0.00001138 54.0
SYD3_k127_8347783_2 Cation efflux family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008554 325.0
SYD3_k127_8347783_3 PFAM ATP-binding region, ATPase domain protein domain protein K07683 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006699 321.0
SYD3_k127_8347783_4 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003991 272.0
SYD3_k127_8347783_5 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003724 253.0
SYD3_k127_8347783_6 Pfam:UPF0118 - - - 0.0000000000000000000000000000000000000000000000000000000000000001414 235.0
SYD3_k127_8347783_7 trehalose biosynthetic process K01087 - 3.1.3.12 0.000000000000000000000000000000000000000000000000000002031 202.0
SYD3_k127_8347783_8 Fe2+ transport protein - - - 0.00000000000000000000000000000000000000000000002298 175.0
SYD3_k127_8383897_0 Non-ribosomal peptide synthetase modules and related - - - 0.0 1129.0
SYD3_k127_8383897_1 non-ribosomal peptide synthetase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003087 372.0
SYD3_k127_8387557_0 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003182 475.0
SYD3_k127_8440278_0 TonB-dependent receptor K13735,K20276 - - 2.402e-247 793.0
SYD3_k127_8440278_1 Transport of potassium into the cell K03549 - - 2.992e-244 769.0
SYD3_k127_8440278_2 Putative glucoamylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003134 617.0
SYD3_k127_8440278_3 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 308.0
SYD3_k127_8440278_4 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003297 260.0
SYD3_k127_8440278_5 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000002974 226.0
SYD3_k127_8454221_0 Putative transposase of IS4/5 family (DUF4096) K07492 - - 0.00000000000000000000000000000000000000000000000000000000000000000004466 234.0
SYD3_k127_8454221_1 Transposase DDE domain - - - 0.000000000000000000000000000000000000000009832 158.0
SYD3_k127_8476943_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000004986 115.0
SYD3_k127_8476943_1 transporter activity - GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.00001543 53.0
SYD3_k127_8477394_0 COG3385 FOG Transposase and inactivated derivatives - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003292 505.0
SYD3_k127_8498608_0 Reverse transcriptase (RNA-dependent DNA polymerase) K00986 - 2.7.7.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 610.0
SYD3_k127_8498608_1 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000000000000000008271 174.0
SYD3_k127_8498608_2 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000003914 144.0
SYD3_k127_8498608_3 reverse transcriptase - - - 0.0000000000000007507 81.0
SYD3_k127_8499175_0 AsmA family K07289 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 631.0
SYD3_k127_8499175_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004473 412.0
SYD3_k127_8499175_10 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000526 181.0
SYD3_k127_8499175_11 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000001105 173.0
SYD3_k127_8499175_12 Acetyltransferase (GNAT) domain - GO:0003674,GO:0003824,GO:0008080,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747 - 0.0000000000000000000000000000000000000000000424 165.0
SYD3_k127_8499175_13 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000257 168.0
SYD3_k127_8499175_15 TIGRFAM TonB K03832 - - 0.00000000000000000005593 102.0
SYD3_k127_8499175_16 COG0810 Periplasmic protein TonB, links inner and outer membranes K03832 - - 0.00007521 51.0
SYD3_k127_8499175_2 PFAM CheR methyltransferase, SAM binding domain K00575,K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 377.0
SYD3_k127_8499175_3 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 347.0
SYD3_k127_8499175_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 324.0
SYD3_k127_8499175_5 CHASE3 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000034 310.0
SYD3_k127_8499175_6 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002529 278.0
SYD3_k127_8499175_7 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005084 278.0
SYD3_k127_8499175_8 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000000000005817 259.0
SYD3_k127_8499175_9 AntiSigma factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000001589 240.0
SYD3_k127_8504335_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 560.0
SYD3_k127_8504335_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K15372 - 2.6.1.55 0.00000000000000000000000000000000000000007099 156.0
SYD3_k127_8504335_2 Protein of unknown function (DUF3467) - - - 0.0000000000000000000000000000000000000007976 150.0
SYD3_k127_8504524_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 1.611e-292 904.0
SYD3_k127_8513543_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007658 421.0
SYD3_k127_8513543_1 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 374.0
SYD3_k127_8513543_2 Formate/nitrite transporter K21990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 321.0
SYD3_k127_8513543_3 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000005946 183.0
SYD3_k127_8513543_4 - - - - 0.000000000000000000000000000000000005253 148.0
SYD3_k127_8516016_0 Type IV pilus assembly protein PilM; K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004637 560.0
SYD3_k127_8516016_1 Secretin and TonB N terminus short domain K02666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 554.0
SYD3_k127_8516016_2 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 455.0
SYD3_k127_8516016_3 CHASE3 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000702 381.0
SYD3_k127_8516016_4 Ribonuclease E/G family K08301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 340.0
SYD3_k127_8516016_5 PFAM Fimbrial assembly family protein K02663 - - 0.0000000000000000000000000000000000000000000000000000000000005098 216.0
SYD3_k127_8516016_6 carbon utilization K02664,K02665,K12280 - - 0.000000000000000000000000000000000000000000000000000000000003139 215.0
SYD3_k127_8516016_8 Helix-turn-helix domain - - - 0.000000000000000000000000000000001266 130.0
SYD3_k127_8516016_9 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 0.00006582 50.0
SYD3_k127_8537830_0 Glycosyl hydrolase family 3 C-terminal domain K05349 - 3.2.1.21 4.14e-249 784.0
SYD3_k127_8537830_1 Putative glucoamylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 607.0
SYD3_k127_8537830_2 Tetratricopeptide repeat - - - 0.00000000657 64.0
SYD3_k127_8539635_0 PFAM glycoside hydrolase family 77 K00705 - 2.4.1.25 1.106e-226 713.0
SYD3_k127_8539635_1 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007518 532.0
SYD3_k127_8539635_2 Peptidylprolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006441 472.0
SYD3_k127_8539635_3 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000006711 132.0
SYD3_k127_8554265_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 343.0
SYD3_k127_8554265_1 tetratricopeptide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 295.0
SYD3_k127_8558068_0 Melibiase K07407 - 3.2.1.22 1.456e-279 874.0
SYD3_k127_8558068_1 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 433.0
SYD3_k127_8564071_0 Protein kinase domain K08884 - 2.7.11.1 2.506e-284 898.0
SYD3_k127_8564071_1 radical SAM domain protein K22318 - - 3.678e-267 831.0
SYD3_k127_8564071_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 297.0
SYD3_k127_8564071_3 Diacylglycerol kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000005482 241.0
SYD3_k127_8564071_4 - - - - 0.000000000000000000000000000000000000000000000000000000005234 213.0
SYD3_k127_8564071_5 PFAM TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000000000000000001694 165.0
SYD3_k127_8564071_6 Transglutaminase-like superfamily - - - 0.0000000001311 62.0
SYD3_k127_8564071_7 PFAM PA14 domain - - - 0.0000283 51.0
SYD3_k127_8599010_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 423.0
SYD3_k127_8599010_1 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006686 304.0
SYD3_k127_8599010_2 cheY-homologous receiver domain - - - 0.000000000000000000002688 100.0
SYD3_k127_8599010_3 - - - - 0.000002375 54.0
SYD3_k127_8603424_0 ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007285 394.0
SYD3_k127_8603424_1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000002057 100.0
SYD3_k127_8603424_2 carbohydrate kinase activity - - - 0.00002496 49.0
SYD3_k127_8606109_1 Aminopeptidase N K01256 - 3.4.11.2 0.00000003329 63.0
SYD3_k127_8636441_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1455.0
SYD3_k127_8636441_1 TonB dependent receptor - - - 3.374e-303 971.0
SYD3_k127_8636441_10 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 367.0
SYD3_k127_8636441_11 PFAM Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 360.0
SYD3_k127_8636441_12 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 338.0
SYD3_k127_8636441_13 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 320.0
SYD3_k127_8636441_14 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003687 246.0
SYD3_k127_8636441_15 PFAM Cytochrome c, class I - - - 0.0000000000000000000000000000000000000000000000000000000000006808 214.0
SYD3_k127_8636441_16 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion - - - 0.00000000000000000000000000000000000000000000000000002383 199.0
SYD3_k127_8636441_17 Lactonase, 7-bladed beta-propeller - - - 0.00000000000000000000000000000000000000000000000000003524 201.0
SYD3_k127_8636441_18 -acetyltransferase K03830,K18816 - 2.3.1.82 0.0000000000000000000000000000000000000000000000001526 181.0
SYD3_k127_8636441_19 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000008646 130.0
SYD3_k127_8636441_2 B12 binding domain - - - 1.187e-270 838.0
SYD3_k127_8636441_20 PFAM cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.00000000000000000000000000009699 119.0
SYD3_k127_8636441_21 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000001353 113.0
SYD3_k127_8636441_22 Uncharacterised nucleotidyltransferase - - - 0.000000000000000000005814 106.0
SYD3_k127_8636441_23 - - - - 0.0000000000000001511 83.0
SYD3_k127_8636441_24 - - - - 0.00000001747 56.0
SYD3_k127_8636441_3 Penicillin amidase K01434 - 3.5.1.11 1.371e-264 844.0
SYD3_k127_8636441_4 B12 binding domain - - - 8.411e-249 775.0
SYD3_k127_8636441_5 B12 binding domain - - - 2.905e-217 684.0
SYD3_k127_8636441_6 B12 binding domain - - - 2.041e-195 619.0
SYD3_k127_8636441_7 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 588.0
SYD3_k127_8636441_8 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006366 522.0
SYD3_k127_8636441_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004422 387.0
SYD3_k127_8655084_0 Methyltransferase - - - 0.0000000000000007239 86.0
SYD3_k127_8655084_1 Integrase core domain - - - 0.0001541 48.0
SYD3_k127_8655210_0 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 2.131e-252 783.0
SYD3_k127_8655210_1 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006231 456.0
SYD3_k127_8655210_2 Secretin and TonB N terminus short domain K02666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008555 332.0
SYD3_k127_8655210_3 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000000000000000000000000000000001285 213.0
SYD3_k127_8655210_4 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000001177 121.0
SYD3_k127_8707814_0 ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001715 278.0
SYD3_k127_8707814_1 DUF1237 K09704 - - 0.0000000000000000000000000000000000000000008003 158.0
SYD3_k127_8707814_2 Protein tyrosine kinase - - - 0.0002329 50.0
SYD3_k127_87225_0 Prephenate dehydratase K04518 - 4.2.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 324.0
SYD3_k127_87225_1 alpha/beta hydrolase fold K00641 - 2.3.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003745 278.0
SYD3_k127_87225_2 FR47-like protein K03789 - 2.3.1.128 0.0000000000000000000000000001626 120.0
SYD3_k127_87225_4 - - - - 0.000000000000009192 83.0
SYD3_k127_87225_5 CsbD-like - - - 0.0000000000009551 72.0
SYD3_k127_8723166_0 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007528 552.0
SYD3_k127_8723166_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 377.0
SYD3_k127_8723166_2 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 302.0
SYD3_k127_8755934_0 Carboxypeptidase regulatory-like domain - - - 0.0 1568.0
SYD3_k127_8755934_1 PFAM Uncharacterised BCR, COG1649 - - - 3.503e-266 832.0
SYD3_k127_8755934_2 Belongs to the glycosyl hydrolase 31 family K07407 - 3.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 602.0
SYD3_k127_8755934_3 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000053 570.0
SYD3_k127_8755934_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 529.0
SYD3_k127_8755934_5 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 351.0
SYD3_k127_8755934_6 Transcriptional regulator, DeoR K02081 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008897 323.0
SYD3_k127_8755934_7 SIS domain K00820 - 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 327.0
SYD3_k127_8755934_8 Hypothetical glycosyl hydrolase 6 - - - 0.0003248 54.0
SYD3_k127_8763450_0 Amino acid adenylation domain - - - 1.079e-286 904.0
SYD3_k127_878016_0 ABC transporter K11085 - - 1.049e-268 839.0
SYD3_k127_878016_1 single-stranded-DNA-specific exonuclease RecJ K07462 - - 2.367e-218 687.0
SYD3_k127_878016_10 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000001037 219.0
SYD3_k127_878016_11 methyltransferase activity - - - 0.0000000000000000000000000000000000000000002898 166.0
SYD3_k127_878016_12 RDD family - - - 0.0000000000000000000000000000896 123.0
SYD3_k127_878016_13 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000008478 102.0
SYD3_k127_878016_2 lipopolysaccharide transport K09774 - - 8.603e-198 642.0
SYD3_k127_878016_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 585.0
SYD3_k127_878016_4 RNA polymerase sigma-54 factor K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 585.0
SYD3_k127_878016_5 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002726 430.0
SYD3_k127_878016_6 ABC transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003697 415.0
SYD3_k127_878016_7 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 399.0
SYD3_k127_878016_8 Ribosomal subunit interface protein K05808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001145 262.0
SYD3_k127_878016_9 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000003983 259.0
SYD3_k127_8806135_0 polysaccharide biosynthetic process - - - 0.000000000000000000000000000000000000000008982 164.0
SYD3_k127_8806135_1 - - - - 0.00000000000000006754 91.0
SYD3_k127_8820829_0 Involved in the tonB-independent uptake of proteins K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 537.0
SYD3_k127_8820829_1 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 505.0
SYD3_k127_8820829_2 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 400.0
SYD3_k127_8820829_3 Flavin reductase like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000305 250.0
SYD3_k127_8820829_4 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000000008788 199.0
SYD3_k127_8820829_5 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000003816 168.0
SYD3_k127_8820829_6 PFAM Methylated-DNA- protein -cysteine S-methyltransferase DNA binding K07443 - - 0.000000000000000000000000000000000000001837 151.0
SYD3_k127_8820829_8 - - - - 0.000000000000000002188 96.0
SYD3_k127_8820829_9 phosphorelay signal transduction system - - - 0.000154 50.0
SYD3_k127_8834050_0 S1/P1 Nuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002886 287.0
SYD3_k127_8834050_1 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006181 259.0
SYD3_k127_8834050_2 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000009448 205.0
SYD3_k127_8834050_3 Cytidine and deoxycytidylate deaminase zinc-binding region K01489 - 3.5.4.5 0.000000000000000000000000000000000000004344 153.0
SYD3_k127_8834050_4 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.00000000000000000000000000001192 121.0
SYD3_k127_8902381_0 Proton-conducting membrane transporter K00342 - 1.6.5.3 1.891e-200 629.0
SYD3_k127_8926925_0 Belongs to the glycosyl hydrolase 2 family K15855 - 3.2.1.165 4.836e-298 933.0
SYD3_k127_8926925_1 PFAM Magnesium chelatase, ChlI subunit K07391 - - 1.253e-266 827.0
SYD3_k127_8926925_2 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000007677 141.0
SYD3_k127_8948748_0 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000001094 233.0
SYD3_k127_8952932_0 SEC-C Motif Domain Protein - - - 4.935e-221 701.0
SYD3_k127_8952932_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.000000003696 70.0
SYD3_k127_8974964_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1111.0
SYD3_k127_8974964_1 Fibronectin type III-like domain K05349 - 3.2.1.21 6.919e-200 646.0
SYD3_k127_8974964_10 Protein of unknown function (DUF1573) - - - 0.00003471 55.0
SYD3_k127_8974964_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 1.165e-196 622.0
SYD3_k127_8974964_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000273 343.0
SYD3_k127_8974964_4 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000002496 259.0
SYD3_k127_8974964_5 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000009228 259.0
SYD3_k127_8974964_6 - K07071 - - 0.0000000000000000000000000000000000000000000001888 172.0
SYD3_k127_8974964_7 Domain of unknown function (DUF4347) K20276 - - 0.00000000000000000000000000000000000002601 163.0
SYD3_k127_8974964_8 EamA-like transporter family - - - 0.0000000000000004877 81.0
SYD3_k127_8974964_9 - - - - 0.000000005926 66.0
SYD3_k127_8989371_0 - - - - 0.00000000000000000000000000000000000000000002399 162.0
SYD3_k127_8989371_1 PFAM Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000001502 102.0
SYD3_k127_8989371_2 Rhodanese Homology Domain - - - 0.0000000000000000000002511 99.0
SYD3_k127_8989695_0 Alpha amylase - - - 0.0 1586.0
SYD3_k127_8989695_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 5.759e-317 983.0
SYD3_k127_8989695_10 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 424.0
SYD3_k127_8989695_11 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004971 355.0
SYD3_k127_8989695_12 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003126 353.0
SYD3_k127_8989695_13 gluconolactonase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 310.0
SYD3_k127_8989695_14 MoaE protein K21142 - 2.8.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004212 289.0
SYD3_k127_8989695_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000002919 241.0
SYD3_k127_8989695_16 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000008468 233.0
SYD3_k127_8989695_17 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002372 233.0
SYD3_k127_8989695_18 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000161 215.0
SYD3_k127_8989695_19 BON domain - - - 0.000000000000000000000000000000000000000000000000000000005758 203.0
SYD3_k127_8989695_2 - - - - 8.189e-309 949.0
SYD3_k127_8989695_20 Hydrogenase maturation protease K03605 - - 0.0000000000000000000000000000000000000000000004655 173.0
SYD3_k127_8989695_22 Hfq protein K03666 - - 0.0000000000000000000000000000000001096 136.0
SYD3_k127_8989695_23 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759 - 4.4.1.5 0.000000000000000000000000000000001468 140.0
SYD3_k127_8989695_24 AraC-like ligand binding domain - - - 0.000000000000000000000007139 106.0
SYD3_k127_8989695_25 - - - - 0.00000000000000000000009232 101.0
SYD3_k127_8989695_26 heat shock protein binding - - - 0.000000000000002031 81.0
SYD3_k127_8989695_3 Nickel-dependent hydrogenase K06281 - 1.12.99.6 4.27e-295 912.0
SYD3_k127_8989695_5 TROVE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000451 565.0
SYD3_k127_8989695_6 NiFe/NiFeSe hydrogenase small subunit C-terminal K06282 - 1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008859 525.0
SYD3_k127_8989695_7 ATP dependent DNA ligase C terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 516.0
SYD3_k127_8989695_8 Pfam Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 449.0
SYD3_k127_8989695_9 Sel1-like repeats. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 436.0
SYD3_k127_900275_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 4.134e-292 904.0
SYD3_k127_900275_1 4 iron, 4 sulfur cluster binding - - - 0.00000000000000000000000000165 115.0
SYD3_k127_9010069_0 oxidoreductase activity - - - 0.00000000000000000000000000001483 121.0
SYD3_k127_9010069_1 PFAM NHL repeat containing protein K13735 - - 0.0005343 53.0
SYD3_k127_9018460_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000005087 222.0
SYD3_k127_9018460_1 Protein of unknown function (DUF507) K09804 - - 0.0000000000000000000000000000000000001642 143.0
SYD3_k127_9018460_2 Protein of unknown function (DUF507) - - - 0.00000000000000000000000000000003142 127.0
SYD3_k127_9018460_3 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.000000000005531 71.0
SYD3_k127_9018460_4 flagellar protein FliS K02422 - - 0.00000000003209 68.0
SYD3_k127_9049006_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 3.294e-221 692.0
SYD3_k127_9049006_1 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 595.0
SYD3_k127_9049006_2 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 365.0
SYD3_k127_9049006_3 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005735 309.0
SYD3_k127_9049006_4 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000007786 261.0
SYD3_k127_9049924_0 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004567 499.0
SYD3_k127_9049924_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009618 437.0
SYD3_k127_9049924_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002368 357.0
SYD3_k127_9049924_3 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008148 320.0
SYD3_k127_9049924_4 Arginosuccinate synthase K01940 - 6.3.4.5 0.0000000000000000000000000000000000000000000000002607 178.0
SYD3_k127_9098412_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1000.0
SYD3_k127_9098412_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 1.457e-217 683.0
SYD3_k127_9098412_10 Protein of unknown function (DUF1761) - - - 0.000000000000000000000000007299 116.0
SYD3_k127_9098412_11 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000000000000005633 107.0
SYD3_k127_9098412_12 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000001589 99.0
SYD3_k127_9098412_13 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000000000007393 86.0
SYD3_k127_9098412_15 energy transducer activity K03832,K07126 - - 0.00000114 59.0
SYD3_k127_9098412_16 - - - - 0.00003299 53.0
SYD3_k127_9098412_2 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 7.099e-201 641.0
SYD3_k127_9098412_3 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 602.0
SYD3_k127_9098412_4 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005681 557.0
SYD3_k127_9098412_5 R3H domain K06346 - - 0.000000000000000000000000000000000000000000000000000000000000002236 222.0
SYD3_k127_9098412_6 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.0000000000000000000000000000000000000000000000001102 182.0
SYD3_k127_9098412_7 Cupin domain - - - 0.0000000000000000000000000000000000000000007314 161.0
SYD3_k127_9098412_8 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000006486 156.0
SYD3_k127_9098412_9 YceI-like domain - - - 0.00000000000000000000000000000001547 131.0
SYD3_k127_9107264_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1159.0
SYD3_k127_9107264_1 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 374.0
SYD3_k127_9107264_2 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 344.0
SYD3_k127_911806_0 Malate/L-lactate dehydrogenase - - - 0.00000000000000000000000000000000008771 146.0
SYD3_k127_911806_1 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.00000001049 63.0
SYD3_k127_9188886_0 Peptidase family M50 K06212,K06402 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 429.0
SYD3_k127_9188886_1 membrane protein, TerC K05794 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005286 357.0
SYD3_k127_9188886_2 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006242 246.0
SYD3_k127_9188886_3 BON domain - - - 0.0000000000000000000000000000000000000000000000000000000106 210.0
SYD3_k127_9188886_4 Lipocalin-like domain K03098 - - 0.00000000000000000000000000000000000000000000000000017 191.0
SYD3_k127_9188886_5 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.000000000000000000000000000000000000000000000003191 186.0
SYD3_k127_9188886_6 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00000000000000000000000001671 119.0
SYD3_k127_9200122_0 response regulator, receiver K02667 - - 7.685e-216 680.0
SYD3_k127_9200122_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 589.0
SYD3_k127_9200122_2 phosphorelay sensor kinase activity K02668 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009089 587.0
SYD3_k127_9200122_3 PFAM Type II secretion system F domain K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 550.0
SYD3_k127_9200122_4 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 523.0
SYD3_k127_9200122_5 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 483.0
SYD3_k127_9200122_6 Transporter associated domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004581 464.0
SYD3_k127_9200122_7 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 324.0
SYD3_k127_9200122_8 Putative adhesin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003373 259.0
SYD3_k127_9200122_9 - - - - 0.00000000000000000000000000000029 123.0
SYD3_k127_9225417_0 PFAM Formiminotransferase domain K00603,K13990 - 2.1.2.5,4.3.1.4 5.084e-239 746.0
SYD3_k127_9225417_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 353.0
SYD3_k127_9225417_2 Oxidoreductase molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002659 279.0
SYD3_k127_9225417_3 Sporulation related domain - - - 0.000000000000000000000000000000000000000000000001097 180.0
SYD3_k127_9225417_4 Lipid A 3-O-deacylase (PagL) - - - 0.0000000000000116 76.0
SYD3_k127_9281658_0 PFAM glycoside hydrolase family 3 K05349 - 3.2.1.21 0.0 1059.0
SYD3_k127_9281658_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 6.045e-199 625.0
SYD3_k127_9281658_2 Oxidoreductase FAD-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005295 319.0
SYD3_k127_9281658_3 TonB-dependent receptor K13735,K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 306.0
SYD3_k127_9281658_4 Participates in transcription elongation, termination and antitermination - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004772 299.0
SYD3_k127_9281658_5 cyclic nucleotide-binding K01420,K10914 - - 0.00000000000000000000000000000000000000001226 163.0
SYD3_k127_9281658_6 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000001027 111.0
SYD3_k127_9299724_0 Peptidase dimerisation domain K01295 - 3.4.17.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003045 391.0
SYD3_k127_9299724_1 FabA-like domain K02372 - 4.2.1.59 0.0000000000000000000000000000006155 123.0
SYD3_k127_9299724_2 protein secretion K03116 - - 0.00000000000003423 73.0
SYD3_k127_9299724_3 - - - - 0.0007466 49.0
SYD3_k127_9326828_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 543.0
SYD3_k127_9326828_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 364.0
SYD3_k127_9326828_3 HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 294.0
SYD3_k127_9326828_4 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000000002158 169.0
SYD3_k127_9326828_5 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000004654 155.0
SYD3_k127_9326828_6 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000004604 115.0
SYD3_k127_9343831_0 allophanate hydrolase subunit 1 K06351 - - 0.000000000000000000000000000000000000000000000000000008794 194.0
SYD3_k127_9343831_1 Allophanate hydrolase subunit 2 K01457,K01941 - 3.5.1.54,6.3.4.6 0.0000000000000000000000000000000000000000000006522 179.0
SYD3_k127_9454477_0 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000000000000000000000000000000005831 143.0
SYD3_k127_9454477_1 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K05825 - - 0.00000000000000000000002622 102.0
SYD3_k127_9454477_2 sequence-specific DNA binding K03719 - - 0.0000000000000004877 81.0
SYD3_k127_94702_0 peptidase K01415,K07386 - 3.4.24.71 6.957e-257 807.0
SYD3_k127_94702_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000619 557.0
SYD3_k127_94702_2 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 456.0
SYD3_k127_94702_3 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000000000000000000000000000002963 240.0
SYD3_k127_94702_4 Selenocysteine synthase N terminal K01042 - 2.9.1.1 0.0000000000000000000000000000000000000000000000000000002811 198.0
SYD3_k127_94702_5 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000000000000000000000000005628 180.0
SYD3_k127_94702_6 - - - - 0.00000000000000000000000000000000000000003297 161.0
SYD3_k127_947769_0 Trypsin-like peptidase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007672 539.0
SYD3_k127_947769_1 peptidyl-tyrosine sulfation - - - 0.0009052 49.0
SYD3_k127_9524839_0 TonB dependent receptor K02014 - - 8.085e-214 683.0
SYD3_k127_9524839_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007152 442.0
SYD3_k127_9524839_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000000000000000000000000000000000000002183 211.0
SYD3_k127_9524839_3 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000000000000000000000003805 164.0
SYD3_k127_9524839_5 His Kinase A (phosphoacceptor) domain - - - 0.00004824 51.0
SYD3_k127_9561632_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1169.0
SYD3_k127_9561632_1 Elongation factor SelB, winged helix K03833 - - 5.595e-226 717.0
SYD3_k127_9561632_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000002786 91.0
SYD3_k127_9571347_0 AMP-binding enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007579 312.0
SYD3_k127_9602183_0 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002569 453.0
SYD3_k127_9602183_1 N-acetyltransferase K00675 - 2.3.1.118 0.0000000000000000000000000000000000000000000000000000000000000000001702 239.0
SYD3_k127_9602183_2 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000001568 109.0
SYD3_k127_9616465_0 Heat shock 70 kDa protein K04043 - - 0.0 1077.0
SYD3_k127_9616465_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 490.0
SYD3_k127_9616465_2 -O-antigen K02847,K13009,K16705 GO:0003674,GO:0003824,GO:0006464,GO:0006486,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0016740,GO:0016757,GO:0019538,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0070085,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000001737 233.0
SYD3_k127_9616465_3 - - - - 0.000000000000000000000000000000000000000000000000000000001119 208.0
SYD3_k127_9617850_0 Zn peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 414.0
SYD3_k127_9617850_1 Dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005659 394.0
SYD3_k127_9617850_2 The glycine cleavage system catalyzes the degradation of glycine K00605,K06980,K22086 - 1.5.99.5,2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005791 349.0
SYD3_k127_9617850_3 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000001235 185.0
SYD3_k127_9617850_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000006232 179.0
SYD3_k127_9617850_5 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.000000000000000000000000000000007673 128.0
SYD3_k127_9617850_6 Domain of unknown function (DUF1844) - - - 0.00000000000000000000000000000003069 132.0
SYD3_k127_9620990_0 PFAM peptidase M13 K01415 - 3.4.24.71 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007343 486.0
SYD3_k127_9620990_1 ATP phosphoribosyltransferase K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 452.0
SYD3_k127_9620990_2 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 304.0
SYD3_k127_9620990_3 PFAM Thymidine kinase K00857 - 2.7.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 287.0
SYD3_k127_9620990_4 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007693 288.0
SYD3_k127_9620990_5 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000000304 183.0
SYD3_k127_9622804_0 Belongs to the MlaE permease family K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 359.0
SYD3_k127_9622804_1 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006577 337.0
SYD3_k127_9622804_2 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000002465 207.0
SYD3_k127_9643147_0 COG3385 FOG Transposase and inactivated derivatives - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 522.0
SYD3_k127_9657375_0 cluster binding protein K18929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 548.0
SYD3_k127_9657375_1 Cysteine-rich domain K18928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 314.0
SYD3_k127_9657375_2 Pyrrolo-quinoline quinone - - - 0.00000000000000000001939 97.0
SYD3_k127_9657375_3 Pfam:DUF162 K00782 - - 0.0000000006086 64.0
SYD3_k127_9659848_0 PEP-utilising enzyme, mobile domain K01006 - 2.7.9.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003989 519.0
SYD3_k127_9659848_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009819 307.0
SYD3_k127_966540_0 alpha-l-fucosidase K01206 - 3.2.1.51 1.715e-196 627.0
SYD3_k127_9668298_0 Non-ribosomal peptide synthetase modules and related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002459 513.0
SYD3_k127_9670954_0 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000000000000000001461 166.0
SYD3_k127_9670954_1 Carbohydrate family 9 binding domain-like - - - 0.00000000000000000000134 96.0
SYD3_k127_9676539_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.347e-195 623.0
SYD3_k127_9676539_1 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006261 419.0
SYD3_k127_9676539_2 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007662 322.0
SYD3_k127_9676539_3 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001353 277.0
SYD3_k127_9676539_4 cytokinin biosynthetic process K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000006143 248.0
SYD3_k127_9676539_5 COG0330 Membrane protease subunits stomatin prohibitin homologs - - - 0.0000000000000000000000000000000009389 138.0
SYD3_k127_9676539_6 - - - - 0.00000000000000000008626 93.0
SYD3_k127_9680516_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 6.214e-274 848.0
SYD3_k127_9680516_1 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 433.0
SYD3_k127_9680516_10 - - - - 0.0000000000000000000000000000000000000002019 157.0
SYD3_k127_9680516_11 - - - - 0.0000000000000002 88.0
SYD3_k127_9680516_12 Pfam:DUF2029 - - - 0.000000000000001002 90.0
SYD3_k127_9680516_13 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000001493 58.0
SYD3_k127_9680516_14 Psort location Extracellular, score K07126 - - 0.0008302 46.0
SYD3_k127_9680516_2 PFAM Cytochrome c-type biogenesis protein CcmB K02194 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004456 319.0
SYD3_k127_9680516_3 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 323.0
SYD3_k127_9680516_4 PFAM Cytochrome c assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005813 298.0
SYD3_k127_9680516_5 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001023 276.0
SYD3_k127_9680516_6 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004222 262.0
SYD3_k127_9680516_7 sequence-specific DNA binding - - - 0.0000000000000000000000000000000000000000000000000000002147 204.0
SYD3_k127_9680516_8 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000000000000000000000000003868 171.0
SYD3_k127_9680516_9 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000000000000000000000000000000000000000007257 170.0
SYD3_k127_9717685_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1381.0
SYD3_k127_9717685_1 Sigma-54 interaction domain K15836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 622.0
SYD3_k127_9717685_10 - - - - 0.000000000000000000000000003116 115.0
SYD3_k127_9717685_11 DNA-templated transcription, initiation - - - 0.00000000000000000000002165 107.0
SYD3_k127_9717685_12 Protein of unknown function (DUF1440) - - - 0.00000000000000000001278 98.0
SYD3_k127_9717685_14 - - - - 0.0003843 49.0
SYD3_k127_9717685_2 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT K18139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002612 443.0
SYD3_k127_9717685_3 HlyD family secretion protein K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 337.0
SYD3_k127_9717685_4 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000792 327.0
SYD3_k127_9717685_5 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 305.0
SYD3_k127_9717685_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004951 258.0
SYD3_k127_9717685_7 Alpha-L-arabinofuranosidase K01209 - 3.2.1.55 0.000000000000000000000000000000000000000000000000000000000000000000009167 256.0
SYD3_k127_9717685_8 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 - 2.7.8.41 0.00000000000000000000000000000000000000000000000000000001593 203.0
SYD3_k127_9717685_9 Domain of unknown function (DUF305) K08995 - - 0.000000000000000000000000000000000000002203 159.0
SYD3_k127_9719192_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 586.0
SYD3_k127_9719192_1 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 415.0
SYD3_k127_9755819_0 Acetolactate synthase, large subunit K01652 - 2.2.1.6 1.5e-323 994.0
SYD3_k127_9755819_1 Belongs to the IlvD Edd family K01687 - 4.2.1.9 5.968e-265 827.0
SYD3_k127_9755819_10 Aminotransferase class-III - - - 0.000000000000005781 74.0
SYD3_k127_9755819_2 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 3.49e-258 821.0
SYD3_k127_9755819_3 Ammonium Transporter K03320 - - 4.282e-221 696.0
SYD3_k127_9755819_4 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 495.0
SYD3_k127_9755819_5 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 393.0
SYD3_k127_9755819_6 CBD_II K01181,K03933,K06113,K22033 - 1.14.99.56,3.2.1.8,3.2.1.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 307.0
SYD3_k127_9755819_7 Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000001293 243.0
SYD3_k127_9755819_8 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000001036 184.0
SYD3_k127_9755819_9 PspA/IM30 family K03969 - - 0.000000000000000000000000001461 116.0
SYD3_k127_9777408_0 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 484.0
SYD3_k127_9777408_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 339.0
SYD3_k127_9777408_10 - - - - 0.00000000000001046 77.0
SYD3_k127_9777408_11 chaperone-mediated protein folding - - - 0.00000000007646 70.0
SYD3_k127_9777408_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009258 335.0
SYD3_k127_9777408_3 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 288.0
SYD3_k127_9777408_4 GlcNAc-PI de-N-acetylase K22135 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001215 276.0
SYD3_k127_9777408_5 Hfq protein - - - 0.0000000000000000000000000000000000000000000002372 171.0
SYD3_k127_9777408_6 Belongs to the glycosyl hydrolase 31 family K07407 - 3.2.1.22 0.00000000000000000000000000000000000000006878 162.0
SYD3_k127_9777408_7 YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the K09780 - - 0.0000000000000000000000000000000000001312 144.0
SYD3_k127_9777524_0 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 5.193e-222 695.0
SYD3_k127_9777524_1 MacB-like periplasmic core domain K02004 - - 9.662e-197 620.0
SYD3_k127_9777524_2 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000614 580.0
SYD3_k127_9777524_3 Protein of unknown function (DUF1009) K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001936 244.0
SYD3_k127_9777524_4 - - - - 0.00000000000000000000000000000000000000000000001031 185.0
SYD3_k127_9780685_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1601.0
SYD3_k127_9780685_1 AcrB/AcrD/AcrF family - - - 0.0 1349.0
SYD3_k127_9780685_10 nitrite transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002847 366.0
SYD3_k127_9780685_11 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 356.0
SYD3_k127_9780685_12 nitrite transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003577 350.0
SYD3_k127_9780685_13 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004617 328.0
SYD3_k127_9780685_14 Protein of unknown function (DUF3373) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 315.0
SYD3_k127_9780685_15 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007235 262.0
SYD3_k127_9780685_16 4 iron, 4 sulfur cluster binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000002416 239.0
SYD3_k127_9780685_17 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000001088 234.0
SYD3_k127_9780685_18 Belongs to the precorrin methyltransferase family K02303 - 2.1.1.107 0.000000000000000000000000000000000000000000000000000003096 197.0
SYD3_k127_9780685_19 4Fe-4S dicluster domain K00184,K08358 - - 0.00000000000000000000000000000000000000000000000000004845 195.0
SYD3_k127_9780685_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 6.641e-310 967.0
SYD3_k127_9780685_20 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000006708 176.0
SYD3_k127_9780685_21 Sirohaem biosynthesis protein central K02304 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000000000001597 174.0
SYD3_k127_9780685_22 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000004263 177.0
SYD3_k127_9780685_23 oxidoreductase activity, acting on diphenols and related substances as donors - - - 0.00000000000000000000000000000000000000298 152.0
SYD3_k127_9780685_24 Prokaryotic cytochrome b561 K00127 - - 0.00000000000000000000000000000000000004985 153.0
SYD3_k127_9780685_25 DNA-binding transcription factor activity K03892 - - 0.000000000000000000000000000002059 123.0
SYD3_k127_9780685_26 OsmC-like protein K07397 - - 0.00000000000000000000000001042 114.0
SYD3_k127_9780685_27 Protein of unknown function (DUF2892) - - - 0.000000000000000000003564 94.0
SYD3_k127_9780685_28 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000001281 93.0
SYD3_k127_9780685_3 PFAM nitrite and sulphite reductase 4Fe-4S K00392 - 1.8.7.1 1.834e-251 787.0
SYD3_k127_9780685_30 - - - - 0.0000001919 57.0
SYD3_k127_9780685_31 Uncharacterized small protein (DUF2292) - - - 0.0000003307 54.0
SYD3_k127_9780685_32 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K16079 - - 0.000004514 51.0
SYD3_k127_9780685_33 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.00006446 52.0
SYD3_k127_9780685_4 Molybdopterin oxidoreductase Fe4S4 domain K08352 - 1.8.5.5 1.378e-233 743.0
SYD3_k127_9780685_5 TIGRFAM sulfate ABC transporter, periplasmic sulfate-binding protein K02048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 514.0
SYD3_k127_9780685_6 Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system K02045 - 3.6.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005707 441.0
SYD3_k127_9780685_7 Binding-protein-dependent transport system inner membrane component K02047 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 400.0
SYD3_k127_9780685_8 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 406.0
SYD3_k127_9780685_9 Sulfate ABC transporter inner membrane subunit CysT K02046 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008331 381.0
SYD3_k127_9786763_0 Gaf domain K03832 - - 0.00000000000000000000000000000000000000000000000001064 203.0
SYD3_k127_9786763_1 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000000000002849 181.0
SYD3_k127_9786763_2 - - - - 0.0000000000000000000000000000000000000000001884 166.0
SYD3_k127_979678_0 FMN binding - - - 5.85e-243 760.0
SYD3_k127_979678_1 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 7.248e-238 741.0
SYD3_k127_979678_10 negative regulation of growth - - - 0.0000000000002182 73.0
SYD3_k127_979678_2 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding K00335,K18331 - 1.12.1.3,1.6.5.3 3.245e-224 713.0
SYD3_k127_979678_3 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K19270 - 3.1.3.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000408 281.0
SYD3_k127_979678_4 membrane protein (DUF2254) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001709 289.0
SYD3_k127_979678_5 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 - 3.6.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000008989 244.0
SYD3_k127_979678_6 Iron hydrogenase small subunit K00123,K00336,K18332 - 1.12.1.3,1.17.1.9,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000001867 245.0
SYD3_k127_979678_7 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000004765 164.0
SYD3_k127_979678_8 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.00000000000000000000000000000000000000005144 158.0
SYD3_k127_979678_9 Protein of unknown function (DUF3079) - - - 0.0000000000000000000000008939 105.0
SYD3_k127_9800827_0 PFAM ATPase associated with various cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009411 369.0
SYD3_k127_9800827_1 PIN domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001227 263.0
SYD3_k127_9800827_2 oligosaccharyl transferase activity - - - 0.00000000000000000000000000000000000000000000000000000000001614 222.0
SYD3_k127_9800827_3 DNA excision - - - 0.000000000000000000000000000000000000000000000000000001834 197.0
SYD3_k127_9801095_0 PFAM YdjC family protein K03478 - 3.5.1.105 0.000000000000000000000000000000000000000000000000000000000000000000000000008555 262.0
SYD3_k127_9801095_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000000001088 164.0
SYD3_k127_9813656_0 Amidinotransferase K01482 - 3.5.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004331 280.0
SYD3_k127_9813656_1 - - - - 0.000000000000000000000000000000000000000000000000000000000006245 213.0
SYD3_k127_9813656_2 Threonyl and Alanyl tRNA synthetase second additional domain K01872 - 6.1.1.7 0.000000000000000000000000000000000000000000000000000000009559 208.0
SYD3_k127_9813656_3 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000005553 134.0
SYD3_k127_9813656_4 Outer membrane efflux protein - - - 0.0000000000005561 73.0
SYD3_k127_9815532_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 438.0
SYD3_k127_9815532_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 379.0
SYD3_k127_9815532_2 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 292.0
SYD3_k127_9815532_3 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000003 249.0
SYD3_k127_9815532_4 Deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000007863 221.0
SYD3_k127_9815532_5 Probable molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000003656 195.0
SYD3_k127_9815532_6 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000009989 167.0
SYD3_k127_9820901_0 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 554.0
SYD3_k127_9820901_1 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000001667 130.0
SYD3_k127_9820901_2 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 GO:0005575,GO:0005623,GO:0005886,GO:0009288,GO:0009425,GO:0016020,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0071944 - 0.000000000000000009096 85.0
SYD3_k127_9820901_3 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000002623 55.0
SYD3_k127_9820901_4 COG3190 Flagellar biogenesis protein K02418 - - 0.0006253 47.0
SYD3_k127_984708_0 Di-glucose binding within endoplasmic reticulum - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 394.0
SYD3_k127_984708_1 metal ion transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 355.0
SYD3_k127_984708_2 MerR, DNA binding K13639 - - 0.000000000000000000000000000000000000000000000000000000000085 207.0
SYD3_k127_984708_3 Protein of unknown function (DUF2938) - - - 0.000000000000000000000000000000000000000000000000000000137 199.0
SYD3_k127_984708_4 - - - - 0.00000000000000000000000000000000000000000000001037 179.0
SYD3_k127_984708_5 Tetratricopeptide repeat - - - 0.0000000000006423 74.0
SYD3_k127_984708_8 TIGRFAM type IV pilus biogenesis stability protein PilW K02656 - - 0.000002885 58.0
SYD3_k127_9868011_0 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000007531 183.0
SYD3_k127_9868011_1 GGDEF domain K13590 - 2.7.7.65 0.000000000000000000000000000000001513 139.0
SYD3_k127_9894480_0 amino acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004288 499.0
SYD3_k127_9894480_1 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 292.0
SYD3_k127_9894480_2 - - - - 0.00000001028 58.0
SYD3_k127_9929434_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031 445.0
SYD3_k127_9929434_2 DHH family K06881 - 3.1.13.3,3.1.3.7 0.00000006238 55.0
SYD3_k127_9969836_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005269 460.0
SYD3_k127_9969836_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 404.0
SYD3_k127_9969836_2 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 387.0
SYD3_k127_9969836_3 Integral membrane protein CcmA involved in cell shape determination - - - 0.000005264 58.0
SYD3_k127_9979502_0 Amino acid kinase family K00926 - 2.7.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 492.0
SYD3_k127_9979502_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000009838 87.0