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Overview

ID MAG03807
Name SYD3_bin.9
Sample SMP0096
Taxonomy
Kingdom Bacteria
Phylum Chloroflexota
Class Dehalococcoidia
Order DSTF01
Family WHTK01
Genus WHTK01
Species
Assembly information
Completeness (%) 92.62
Contamination (%) 3.08
GC content (%) 68.0
N50 (bp) 23,038
Genome size (bp) 3,530,552

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3061

Gene name Description KEGG GOs EC E-value Score Sequence
SYD3_k127_10053467_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 8.157e-301 936.0
SYD3_k127_10053467_1 Protein of unknown function, DUF255 K06888 - - 2.692e-247 782.0
SYD3_k127_10053467_10 Rieske [2Fe-2S] domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 333.0
SYD3_k127_10053467_11 Deoxyhypusine synthase K00809 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008612,GO:0009058,GO:0009987,GO:0010467,GO:0016740,GO:0016765,GO:0018193,GO:0018205,GO:0019538,GO:0034038,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004006 323.0
SYD3_k127_10053467_12 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 319.0
SYD3_k127_10053467_13 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002957 313.0
SYD3_k127_10053467_14 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000941 308.0
SYD3_k127_10053467_15 Methionine aminopeptidase K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 291.0
SYD3_k127_10053467_16 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001325 278.0
SYD3_k127_10053467_17 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001368 272.0
SYD3_k127_10053467_18 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001504 259.0
SYD3_k127_10053467_19 PFAM transferase hexapeptide repeat containing protein K00966 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000003046 259.0
SYD3_k127_10053467_2 Fe-S oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005739 543.0
SYD3_k127_10053467_20 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000001878 244.0
SYD3_k127_10053467_21 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004885 243.0
SYD3_k127_10053467_22 protocatechuate 3,4-dioxygenase activity K03381 - 1.13.11.1 0.00000000000000000000000000000000000000000000000000000000000000000008315 237.0
SYD3_k127_10053467_23 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000000000000000000000000000000000000000000000000000000005831 229.0
SYD3_k127_10053467_24 Arginase family K01480 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000000009617 235.0
SYD3_k127_10053467_25 diacylglycerol kinase, catalytic region - - - 0.00000000000000000000000000000000000000000000000000000000000008181 224.0
SYD3_k127_10053467_26 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000005975 213.0
SYD3_k127_10053467_27 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000002987 211.0
SYD3_k127_10053467_28 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0000027,GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000225 202.0
SYD3_k127_10053467_29 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000000000002911 201.0
SYD3_k127_10053467_3 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 426.0
SYD3_k127_10053467_30 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000000008342 192.0
SYD3_k127_10053467_31 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000002034 192.0
SYD3_k127_10053467_32 50S ribosomal protein L4 K02926 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000006323 196.0
SYD3_k127_10053467_33 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0030312,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363 5.4.99.12 0.000000000000000000000000000000000000000000000000001212 193.0
SYD3_k127_10053467_34 Belongs to the UPF0761 family K07058 - - 0.0000000000000000000000000000000000000000000000002302 190.0
SYD3_k127_10053467_35 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000000000000000005458 178.0
SYD3_k127_10053467_36 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000009667 176.0
SYD3_k127_10053467_37 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000006823 172.0
SYD3_k127_10053467_38 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000001011 162.0
SYD3_k127_10053467_39 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000008306 153.0
SYD3_k127_10053467_4 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914 374.0
SYD3_k127_10053467_40 ribosomal protein l17 K02879 - - 0.000000000000000000000000000000000000007633 147.0
SYD3_k127_10053467_41 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000002051 141.0
SYD3_k127_10053467_42 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000002065 141.0
SYD3_k127_10053467_43 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.00000000000000000000000000000000001774 148.0
SYD3_k127_10053467_44 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K00797,K01611 - 2.5.1.16,4.1.1.50 0.0000000000000000000000000000000002208 136.0
SYD3_k127_10053467_45 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458,K14660 - 2.3.1.179 0.000000000000000000000000000000001705 134.0
SYD3_k127_10053467_46 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000001717 121.0
SYD3_k127_10053467_47 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000001097 121.0
SYD3_k127_10053467_48 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000000007666 115.0
SYD3_k127_10053467_49 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042788,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000001154 112.0
SYD3_k127_10053467_5 PFAM glycosyl transferase family 20 K00697 - 2.4.1.15,2.4.1.347 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007166 383.0
SYD3_k127_10053467_50 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000003974 106.0
SYD3_k127_10053467_51 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.00000000000000000000002645 100.0
SYD3_k127_10053467_52 Antibiotic biosynthesis monooxygenase K11530 - 5.3.1.32 0.00000000000000000000003254 103.0
SYD3_k127_10053467_53 acetyltransferase - - - 0.000000000000000002192 96.0
SYD3_k127_10053467_54 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000002453 68.0
SYD3_k127_10053467_55 ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000007634 64.0
SYD3_k127_10053467_56 Putative adhesin - - - 0.00000002701 64.0
SYD3_k127_10053467_57 Fatty acid desaturase K03921 - 1.14.19.11,1.14.19.2,1.14.19.26 0.00002295 57.0
SYD3_k127_10053467_58 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0002089 49.0
SYD3_k127_10053467_6 Acyl-CoA dehydrogenase, middle domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005359 367.0
SYD3_k127_10053467_7 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 352.0
SYD3_k127_10053467_8 Putative neutral zinc metallopeptidase K07054 GO:0005575,GO:0005576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007324 342.0
SYD3_k127_10053467_9 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 342.0
SYD3_k127_10067327_0 PFAM Uncharacterised protein family UPF0182 K09118 - - 1.106e-232 751.0
SYD3_k127_10067327_1 Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 439.0
SYD3_k127_10067327_2 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009686 381.0
SYD3_k127_10067327_3 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000003439 209.0
SYD3_k127_10067327_4 - - - - 0.00000000000000000000002872 102.0
SYD3_k127_10067327_5 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000003955 98.0
SYD3_k127_10088731_0 Rieske 2Fe-2S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 498.0
SYD3_k127_10088731_1 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006118 407.0
SYD3_k127_10088731_2 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K11177 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004141 289.0
SYD3_k127_10088731_3 CO dehydrogenase flavoprotein C-terminal domain K11178 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000306 254.0
SYD3_k127_10088731_4 4Fe-4S dicluster domain K05796,K12136 - - 0.000000000000000000004531 104.0
SYD3_k127_10088731_5 formate dehydrogenase K00127 - - 0.000000000000003761 87.0
SYD3_k127_10088731_6 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00001904 58.0
SYD3_k127_10135365_0 FAD linked oxidases, C-terminal domain - - - 1.328e-296 938.0
SYD3_k127_10135365_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005777 360.0
SYD3_k127_10135365_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002475 277.0
SYD3_k127_10135365_3 PFAM ABC-3 protein K09819 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000211 248.0
SYD3_k127_10135365_4 NMT1-like family - - - 0.000000000000000000000000000000000000000005707 179.0
SYD3_k127_10135365_5 Restriction modification system DNA specificity domain protein K01154 - 3.1.21.3 0.0000000000000000000000000001474 119.0
SYD3_k127_10135365_6 SnoaL-like domain K06893 - - 0.0000000000000000000000005858 108.0
SYD3_k127_10135365_7 pyridoxamine 5-phosphate - - - 0.000000000001204 75.0
SYD3_k127_10186653_0 Belongs to the ClpA ClpB family K03696 - - 5e-324 1010.0
SYD3_k127_10186653_1 Penicillin amidase K01434 - 3.5.1.11 9.069e-249 797.0
SYD3_k127_10186653_10 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004015 385.0
SYD3_k127_10186653_11 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 384.0
SYD3_k127_10186653_12 Alanine dehydrogenase/PNT, N-terminal domain K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007313 372.0
SYD3_k127_10186653_13 MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 369.0
SYD3_k127_10186653_14 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004542 365.0
SYD3_k127_10186653_15 aromatic amino acid beta-eliminating lyase threonine aldolase K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 362.0
SYD3_k127_10186653_16 PFAM RNA binding S1 domain protein K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007106 335.0
SYD3_k127_10186653_17 Integral membrane protein TerC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 321.0
SYD3_k127_10186653_18 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 321.0
SYD3_k127_10186653_19 3-phytase (Myo-inositol-hexaphosphate 3-phosphohydrolase) K01083 - 3.1.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005717 298.0
SYD3_k127_10186653_2 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 1.386e-232 754.0
SYD3_k127_10186653_20 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003709 270.0
SYD3_k127_10186653_21 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002734 266.0
SYD3_k127_10186653_22 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005202 258.0
SYD3_k127_10186653_23 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001727 248.0
SYD3_k127_10186653_24 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000002242 218.0
SYD3_k127_10186653_25 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00042 - 1.1.1.60 0.000000000000000000000000000000000000000000000000001148 194.0
SYD3_k127_10186653_26 transcriptional regulator, Rrf2 family - - - 0.000000000000000000000000000000000000000001483 162.0
SYD3_k127_10186653_27 ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component - - - 0.0000000000000000000000000000000000003578 163.0
SYD3_k127_10186653_28 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000001106 153.0
SYD3_k127_10186653_29 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000004648 150.0
SYD3_k127_10186653_3 Belongs to the peptidase S16 family - - - 2.461e-224 721.0
SYD3_k127_10186653_30 PFAM Common central domain of tyrosinase K00505,K02674 - 1.14.18.1 0.00000000000000000000000000006873 131.0
SYD3_k127_10186653_31 PFAM thiamineS protein K03636 GO:0000096,GO:0000097,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0019344,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.0000000000000000000000001493 108.0
SYD3_k127_10186653_32 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.0000000000000000001053 93.0
SYD3_k127_10186653_34 PFAM nuclease (SNase domain protein) K01174 - 3.1.31.1 0.0000000000000007831 90.0
SYD3_k127_10186653_35 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.000000000000003431 82.0
SYD3_k127_10186653_36 - - - - 0.00000000000001651 81.0
SYD3_k127_10186653_37 Bacterial transcription activator, effector binding domain - - - 0.000008304 54.0
SYD3_k127_10186653_4 PFAM glycosyl transferase, family 51 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 481.0
SYD3_k127_10186653_5 ThiF family K03148,K03636,K21029,K21147 - 2.7.7.73,2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 456.0
SYD3_k127_10186653_6 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000549 438.0
SYD3_k127_10186653_7 Rieske 2Fe-2S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 439.0
SYD3_k127_10186653_8 Pyridoxal-phosphate dependent enzyme K01883,K12339,K21148 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0032991,GO:0033847,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.113,2.5.1.47,6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004664 409.0
SYD3_k127_10186653_9 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009462 415.0
SYD3_k127_10200460_0 Rieske 2Fe-2S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 520.0
SYD3_k127_10200460_1 Rieske [2Fe-2S] domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 456.0
SYD3_k127_10200460_10 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.000000000000000000000000000000000000000000007552 177.0
SYD3_k127_10200460_11 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000005621 153.0
SYD3_k127_10200460_12 Flavin reductase like domain - - - 0.0000000000000000000000000000000003324 142.0
SYD3_k127_10200460_13 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000002759 139.0
SYD3_k127_10200460_14 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000001183 131.0
SYD3_k127_10200460_15 Toxic component of a toxin-antitoxin (TA) module. An RNase K07065 - - 0.000000000000000000000000008027 114.0
SYD3_k127_10200460_16 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide - - - 0.0000000000000000000000003393 116.0
SYD3_k127_10200460_17 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000005282 115.0
SYD3_k127_10200460_18 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating K05710,K14578,K18248 GO:0003674,GO:0005488,GO:0006725,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0019439,GO:0044237,GO:0044248,GO:0048037,GO:0051536,GO:0051537,GO:0051540 - 0.00000000007276 64.0
SYD3_k127_10200460_19 secreted Zn-dependent protease - - - 0.0000000006211 71.0
SYD3_k127_10200460_2 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0030145,GO:0030388,GO:0042132,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046872,GO:0046914,GO:0050308,GO:0071704,GO:1901135,GO:1901576 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008026 406.0
SYD3_k127_10200460_20 - - - - 0.0000000009287 70.0
SYD3_k127_10200460_22 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.0001147 45.0
SYD3_k127_10200460_3 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004291 349.0
SYD3_k127_10200460_4 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 314.0
SYD3_k127_10200460_5 PFAM peptidase S58 DmpA K01266 - 3.4.11.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 293.0
SYD3_k127_10200460_6 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000294 258.0
SYD3_k127_10200460_8 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000001186 243.0
SYD3_k127_10200460_9 4,5-dihydroxyphthalate decarboxylase K04102 - 4.1.1.55 0.0000000000000000000000000000000000000000000000000002629 198.0
SYD3_k127_10305649_0 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 536.0
SYD3_k127_10305649_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005835 465.0
SYD3_k127_10305649_10 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000009438 88.0
SYD3_k127_10305649_11 YGGT family K02221 - - 0.00000000001455 70.0
SYD3_k127_10305649_12 Domain of unknown function (DUF4352) - - - 0.0000000000245 72.0
SYD3_k127_10305649_3 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009939 340.0
SYD3_k127_10305649_4 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000005668 239.0
SYD3_k127_10305649_5 redox-sensitive transcriptional activator SoxR K13639 - - 0.00000000000000000000000000000000000000000000000000008691 189.0
SYD3_k127_10305649_6 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000003627 168.0
SYD3_k127_10305649_7 Modulates RecA activity K03565 - - 0.000000000000000000000000000000001371 139.0
SYD3_k127_10305649_8 PFAM regulatory protein, ArsR - - - 0.0000000000000000000000000729 115.0
SYD3_k127_10305649_9 Belongs to the UPF0235 family K09131 - - 0.0000000000000007041 80.0
SYD3_k127_10306793_0 PFAM alpha-2-macroglobulin domain protein K06894 - - 1.106e-291 970.0
SYD3_k127_10306793_1 Penicillin-Binding Protein C-terminus Family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007111 502.0
SYD3_k127_10306793_10 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000003143 161.0
SYD3_k127_10306793_11 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000005111 157.0
SYD3_k127_10306793_12 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000007386 137.0
SYD3_k127_10306793_13 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.00000000000000000000000000006984 134.0
SYD3_k127_10306793_14 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.0000000000000000000000000003143 125.0
SYD3_k127_10306793_15 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000005975 117.0
SYD3_k127_10306793_16 Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K15580 - - 0.00000000000000000000000006972 123.0
SYD3_k127_10306793_17 cellulase activity K01195 - 3.2.1.31 0.0000000000000000000005414 103.0
SYD3_k127_10306793_18 DNA-binding transcription factor activity - - - 0.0000000008487 66.0
SYD3_k127_10306793_2 Belongs to the sulfur carrier protein TusA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000785 467.0
SYD3_k127_10306793_3 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 418.0
SYD3_k127_10306793_4 Methionine synthase K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006364 344.0
SYD3_k127_10306793_5 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 329.0
SYD3_k127_10306793_6 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 341.0
SYD3_k127_10306793_7 Cysteine-rich domain K00241 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 299.0
SYD3_k127_10306793_8 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001012 279.0
SYD3_k127_10306793_9 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000004419 205.0
SYD3_k127_10326740_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 6.738e-227 717.0
SYD3_k127_10326740_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 GO:0003674,GO:0003824,GO:0003861,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009316,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 4.2.1.33,4.2.1.35 1.217e-221 694.0
SYD3_k127_10326740_10 Fibronectin type 3 domain - - - 0.00000000313 69.0
SYD3_k127_10326740_11 EamA-like transporter family - - - 0.0000001133 63.0
SYD3_k127_10326740_12 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0001691 49.0
SYD3_k127_10326740_13 PFAM Uncharacterised protein family UPF0150 - - - 0.0002397 52.0
SYD3_k127_10326740_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 1.549e-204 651.0
SYD3_k127_10326740_3 PFAM Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000793 329.0
SYD3_k127_10326740_4 Transketolase, central region K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 301.0
SYD3_k127_10326740_5 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000008315 250.0
SYD3_k127_10326740_6 ACT domain K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000001372 205.0
SYD3_k127_10326740_7 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000002812 184.0
SYD3_k127_10326740_8 Large family of predicted nucleotide-binding domains - - - 0.000000000000000000000000007347 115.0
SYD3_k127_10326740_9 toxin-antitoxin pair type II binding - - - 0.000000000001081 73.0
SYD3_k127_10375383_0 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003627 575.0
SYD3_k127_10375383_1 Rieske 2Fe-2S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009793 490.0
SYD3_k127_10375383_10 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K19647 - 1.1.1.291,1.1.1.31 0.00000000000000000000000000000000000000000000000000000004883 209.0
SYD3_k127_10375383_11 acetyltransferase involved in intracellular survival and related acetyltransferases - - - 0.0000000000000000000000000000000000000008712 164.0
SYD3_k127_10375383_12 ECF sigma factor K03088 - - 0.000000000000000000000000000001554 128.0
SYD3_k127_10375383_13 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000007454 125.0
SYD3_k127_10375383_14 CoA-transferase family III K07749 - 2.8.3.16 0.0000000000000000001623 98.0
SYD3_k127_10375383_15 Stage II sporulation protein K06381 - - 0.0000000000000002633 92.0
SYD3_k127_10375383_16 protein with SCP PR1 domains - - - 0.0000000000000003054 89.0
SYD3_k127_10375383_17 Helix-turn-helix domain - - - 0.0000000000000004429 87.0
SYD3_k127_10375383_19 protein possibly involved in utilization of glycolate and propanediol - - - 0.00000000002012 69.0
SYD3_k127_10375383_2 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) K01661 - 4.1.3.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 473.0
SYD3_k127_10375383_20 triphosphatase activity K18446 - 3.6.1.25 0.000000000821 62.0
SYD3_k127_10375383_21 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.0000001417 61.0
SYD3_k127_10375383_22 Cell wall-associated hydrolase (invasion-associated protein) - - - 0.0000003757 63.0
SYD3_k127_10375383_24 CoA-transferase family III - - - 0.00003924 55.0
SYD3_k127_10375383_25 sporulation protein K06381 - - 0.00023 53.0
SYD3_k127_10375383_3 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004522 455.0
SYD3_k127_10375383_5 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 316.0
SYD3_k127_10375383_6 TIGRFAM isochorismate synthase K02361,K02552 - 5.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 312.0
SYD3_k127_10375383_7 Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) K08680 - 4.2.99.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005381 287.0
SYD3_k127_10375383_8 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001464 272.0
SYD3_k127_10375383_9 enzyme of poly-gamma-glutamate biosynthesis (Capsule formation) K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007489 261.0
SYD3_k127_10443360_0 DEAD DEAH box helicase K03724 - - 0.0 1371.0
SYD3_k127_10443360_1 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 501.0
SYD3_k127_10443360_10 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.0000000000000000000000000000000000000000001906 164.0
SYD3_k127_10443360_12 PFAM alpha beta hydrolase fold - - - 0.000000000000000000000005379 113.0
SYD3_k127_10443360_13 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.000000000000000000031 98.0
SYD3_k127_10443360_14 hydrolase (HAD superfamily) - - - 0.00000000002586 66.0
SYD3_k127_10443360_15 - - - - 0.00000000006371 72.0
SYD3_k127_10443360_16 - - - - 0.000000001183 64.0
SYD3_k127_10443360_17 The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF- YajC-YidC subcomplex facilitates these functions K03210 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031522,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000002291 60.0
SYD3_k127_10443360_2 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006559 460.0
SYD3_k127_10443360_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004111 388.0
SYD3_k127_10443360_4 PFAM Polynucleotide adenylyltransferase region K00970,K00974 - 2.7.7.19,2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006341 312.0
SYD3_k127_10443360_5 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005024 312.0
SYD3_k127_10443360_6 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K03074,K12257 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000008021 255.0
SYD3_k127_10443360_7 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000003331 237.0
SYD3_k127_10443360_8 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000000000000000000000009186 198.0
SYD3_k127_10443360_9 N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity - - - 0.0000000000000000000000000000000000000000000000000007147 190.0
SYD3_k127_10473147_0 Elongation factor G, domain IV K02355 - - 1.247e-234 745.0
SYD3_k127_10473147_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 432.0
SYD3_k127_10473147_10 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000001569 176.0
SYD3_k127_10473147_11 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000001259 162.0
SYD3_k127_10473147_12 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000004707 162.0
SYD3_k127_10473147_13 Single-strand binding protein family K03111 - - 0.00000000000000000000000000000000000008556 146.0
SYD3_k127_10473147_14 PFAM conserved - - - 0.00000000000000000000000000000000001415 144.0
SYD3_k127_10473147_15 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.00000000000000000000000000000000003316 153.0
SYD3_k127_10473147_16 PFAM Histidine triad (HIT) protein K02503 - - 0.000000000000000000000000000000005567 130.0
SYD3_k127_10473147_17 Hydrolase, HD family K00969 - 2.7.7.18 0.000000000000000000000000000008756 130.0
SYD3_k127_10473147_18 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000001049 121.0
SYD3_k127_10473147_19 - - - - 0.0000000000000000000000000003006 119.0
SYD3_k127_10473147_2 Homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005204 434.0
SYD3_k127_10473147_20 sh3 domain protein - - - 0.0000000000000000000000338 116.0
SYD3_k127_10473147_21 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) - - - 0.000000000000000000008488 98.0
SYD3_k127_10473147_22 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749,K18313 - 2.8.3.16,2.8.3.20 0.00000000000000000006485 93.0
SYD3_k127_10473147_23 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000001539 92.0
SYD3_k127_10473147_24 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000001496 98.0
SYD3_k127_10473147_26 Peptidylprolyl isomerase K07533 - 5.2.1.8 0.00005042 55.0
SYD3_k127_10473147_3 Phenazine biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006886 329.0
SYD3_k127_10473147_4 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 298.0
SYD3_k127_10473147_5 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006462 275.0
SYD3_k127_10473147_6 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001377 254.0
SYD3_k127_10473147_7 Phosphoenolpyruvate phosphomutase - - - 0.00000000000000000000000000000000000000000000000000000000000000001533 232.0
SYD3_k127_10473147_8 PFAM peptidase S1 and S6, chymotrypsin Hap K08070 - 1.3.1.74 0.00000000000000000000000000000000000000000000000000000000000000003921 235.0
SYD3_k127_10473147_9 Globin - - - 0.0000000000000000000000000000000000000000000001207 173.0
SYD3_k127_10523817_0 Protein of unknown function (DUF3500) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 394.0
SYD3_k127_10523817_1 KR domain K00065 - 1.1.1.127 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007492 348.0
SYD3_k127_10523817_2 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000000000000000000000000000000005758 220.0
SYD3_k127_10523817_3 Conserved hypothetical protein (Lin0512_fam) - - - 0.0000000000000000000006807 98.0
SYD3_k127_10618006_0 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000009553 240.0
SYD3_k127_10618006_1 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000005114 199.0
SYD3_k127_10618006_2 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000003344 123.0
SYD3_k127_10618006_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000003662 87.0
SYD3_k127_1064177_0 PFAM ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 591.0
SYD3_k127_1064177_1 AlkA N-terminal domain K13529 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 423.0
SYD3_k127_1064177_10 Thioredoxin - - - 0.0000000000000000000000000000000000000003533 164.0
SYD3_k127_1064177_11 Belongs to the universal stress protein A family - - - 0.00000000000000000000000000000000001422 148.0
SYD3_k127_1064177_12 VKc - - - 0.00000000000008845 77.0
SYD3_k127_1064177_13 PFAM Universal stress protein family - - - 0.000000000005822 76.0
SYD3_k127_1064177_14 Glycosyltransferase family 87 - - - 0.00001132 58.0
SYD3_k127_1064177_15 DNA-binding transcription factor activity K06075 - - 0.00001619 56.0
SYD3_k127_1064177_2 Acetyl-CoA acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004405 351.0
SYD3_k127_1064177_3 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 358.0
SYD3_k127_1064177_4 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 337.0
SYD3_k127_1064177_5 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001406 274.0
SYD3_k127_1064177_6 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001788 261.0
SYD3_k127_1064177_7 methyltransferase - - - 0.00000000000000000000000000000000000000000000007804 177.0
SYD3_k127_1064177_9 FAD linked oxidase domain protein K00803,K11472 - 2.5.1.26 0.000000000000000000000000000000000000000002708 176.0
SYD3_k127_10648855_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 467.0
SYD3_k127_10648855_1 PFAM AAA ATPase central domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 413.0
SYD3_k127_10648855_10 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.000000000000000002525 96.0
SYD3_k127_10648855_11 Flp Fap pilin component K02651 - - 0.0001491 49.0
SYD3_k127_10648855_2 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003404 295.0
SYD3_k127_10648855_3 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000001492 231.0
SYD3_k127_10648855_4 Belongs to the peptidase S8 family K08651 - 3.4.21.66 0.0000000000000000000000000000000000000000000000000001527 211.0
SYD3_k127_10648855_5 Protein of unknown function (DUF429) - - - 0.000000000000000000000000000000000000001928 162.0
SYD3_k127_10648855_6 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000154 112.0
SYD3_k127_10648855_7 PFAM sigma-70 region 2 domain protein K03088 - - 0.000000000000000000000000004686 123.0
SYD3_k127_10648855_8 oxidoreductase activity K07114,K12511 - - 0.00000000000000000000008313 114.0
SYD3_k127_10648855_9 PFAM Cysteine-rich secretory protein family - - - 0.0000000000000000005689 100.0
SYD3_k127_10649989_0 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0001666,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0034355,GO:0034641,GO:0034654,GO:0036293,GO:0043094,GO:0043173,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044403,GO:0044419,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0075136,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 409.0
SYD3_k127_10649989_1 PFAM isochorismatase hydrolase K08281 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006766,GO:0006767,GO:0006769,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008936,GO:0009820,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0017144,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0071704,GO:0072524,GO:1901360,GO:1901564 3.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000896 228.0
SYD3_k127_10697367_0 SMART alpha amylase, catalytic sub domain K01187,K05343 - 3.2.1.1,3.2.1.20,5.4.99.16 0.0 1409.0
SYD3_k127_10697367_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 6.945e-300 932.0
SYD3_k127_10697367_10 PFAM aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004936 400.0
SYD3_k127_10697367_11 Methionine synthase II (cobalamin-independent) K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 348.0
SYD3_k127_10697367_12 AraC-like ligand binding domain K00450 - 1.13.11.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 346.0
SYD3_k127_10697367_13 Methionine synthase K00549,K22363 - 2.1.1.14,4.4.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000983 336.0
SYD3_k127_10697367_14 F5 8 type C domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 341.0
SYD3_k127_10697367_15 Methionine synthase K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005595 328.0
SYD3_k127_10697367_16 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 326.0
SYD3_k127_10697367_17 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007377 312.0
SYD3_k127_10697367_18 Acyl CoA acetate 3-ketoacid CoA transferase beta subunit K01027,K01029 - 2.8.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 310.0
SYD3_k127_10697367_19 TIM-barrel fold metal-dependent hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 299.0
SYD3_k127_10697367_2 Belongs to the glycosyl hydrolase 57 family - - - 5.673e-259 822.0
SYD3_k127_10697367_20 PFAM ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002786 285.0
SYD3_k127_10697367_21 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000004451 220.0
SYD3_k127_10697367_22 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000007987 207.0
SYD3_k127_10697367_23 PFAM peptidase S11, D-alanyl-D-alanine carboxypeptidase K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000000000006364 192.0
SYD3_k127_10697367_24 phosphoprotein phosphatase activity - - - 0.00000000000000000000000000000000000000000000004304 175.0
SYD3_k127_10697367_25 PFAM transferase hexapeptide repeat containing protein K00661 - 2.3.1.79 0.000000000000000000000000000000000000000003052 162.0
SYD3_k127_10697367_26 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.000000000000000000000000000000000000000007061 159.0
SYD3_k127_10697367_27 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000002034 166.0
SYD3_k127_10697367_28 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000246 169.0
SYD3_k127_10697367_29 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000009869 150.0
SYD3_k127_10697367_3 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 1.519e-244 771.0
SYD3_k127_10697367_30 Peptidase family S51 - - - 0.00000000000000000000000000000000001141 145.0
SYD3_k127_10697367_31 SnoaL-like domain - - - 0.0000000000000000000000000000000006595 137.0
SYD3_k127_10697367_32 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000009837 141.0
SYD3_k127_10697367_33 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000007789 140.0
SYD3_k127_10697367_34 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000002369 130.0
SYD3_k127_10697367_35 Predicted membrane protein (DUF2142) - - - 0.00000000000000000000000000000174 137.0
SYD3_k127_10697367_36 Protein involved in magnesium ion binding, hydrolase activity and metabolism - - - 0.000000000000000000001474 108.0
SYD3_k127_10697367_37 - - - - 0.000000000000000000001561 99.0
SYD3_k127_10697367_38 ornithine cyclodeaminase mu-crystallin K19244 - 1.4.1.1 0.000000000000000000008574 104.0
SYD3_k127_10697367_39 Putative peptidoglycan binding domain - - - 0.00000000000462 78.0
SYD3_k127_10697367_4 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 6.522e-202 648.0
SYD3_k127_10697367_40 - - - - 0.000000000007805 76.0
SYD3_k127_10697367_41 Belongs to the UPF0337 (CsbD) family - - - 0.0000000004549 63.0
SYD3_k127_10697367_42 - - - - 0.000001355 54.0
SYD3_k127_10697367_43 PFAM Glyoxalase bleomycin resistance protein dioxygenase K08234 - - 0.0003772 48.0
SYD3_k127_10697367_5 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 569.0
SYD3_k127_10697367_6 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 460.0
SYD3_k127_10697367_7 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 458.0
SYD3_k127_10697367_8 Rieske 2Fe-2S - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 442.0
SYD3_k127_10697367_9 PFAM glycosyl transferase, family 51 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005651 439.0
SYD3_k127_10719206_0 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000001535 249.0
SYD3_k127_10719206_1 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000001135 244.0
SYD3_k127_10719206_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000005354 229.0
SYD3_k127_10719206_3 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000004127 205.0
SYD3_k127_10719206_4 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.000000000000000000000000000000000000000000005419 173.0
SYD3_k127_10719206_5 Redoxin K03386 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0020012,GO:0030682,GO:0042221,GO:0043207,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0051920,GO:0052060,GO:0052173,GO:0052200,GO:0052376,GO:0052551,GO:0052564,GO:0052565,GO:0052572,GO:0055114,GO:0070887,GO:0075136,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.0000000000000000000000000000000000000002771 154.0
SYD3_k127_10719206_6 Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c - GO:0008150,GO:0009987,GO:0016043,GO:0017004,GO:0022607,GO:0034622,GO:0043933,GO:0044085,GO:0065003,GO:0071840 - 0.0000000000000000000000001 114.0
SYD3_k127_10719206_7 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED - - - 0.0000000000001284 80.0
SYD3_k127_10719206_8 heparan sulfate proteoglycan K06255 GO:0000323,GO:0000902,GO:0000904,GO:0001523,GO:0002119,GO:0002164,GO:0003674,GO:0005102,GO:0005178,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005604,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005773,GO:0005775,GO:0005794,GO:0005796,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006026,GO:0006027,GO:0006629,GO:0006720,GO:0006721,GO:0006807,GO:0006810,GO:0006897,GO:0006898,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006954,GO:0006996,GO:0007010,GO:0007044,GO:0007154,GO:0007163,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007414,GO:0007415,GO:0007417,GO:0007420,GO:0007517,GO:0008022,GO:0008037,GO:0008038,GO:0008045,GO:0008150,GO:0008152,GO:0008543,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009605,GO:0009653,GO:0009719,GO:0009790,GO:0009791,GO:0009792,GO:0009887,GO:0009892,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010605,GO:0010646,GO:0010647,GO:0010927,GO:0010941,GO:0012505,GO:0016020,GO:0016043,GO:0016101,GO:0016192,GO:0016477,GO:0016525,GO:0019222,GO:0019538,GO:0022008,GO:0022603,GO:0022607,GO:0022612,GO:0023051,GO:0023052,GO:0023056,GO:0030011,GO:0030029,GO:0030030,GO:0030036,GO:0030154,GO:0030182,GO:0030198,GO:0030203,GO:0030239,GO:0031012,GO:0031032,GO:0031175,GO:0031581,GO:0031974,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0032991,GO:0034329,GO:0034330,GO:0035088,GO:0035090,GO:0035295,GO:0040011,GO:0040012,GO:0040017,GO:0042221,GO:0042330,GO:0042493,GO:0042692,GO:0043062,GO:0043170,GO:0043202,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043292,GO:0043900,GO:0043902,GO:0044085,GO:0044237,GO:0044238,GO:0044255,GO:0044260,GO:0044267,GO:0044344,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044437,GO:0044444,GO:0044446,GO:0044449,GO:0044459,GO:0044464,GO:0044877,GO:0045197,GO:0045199,GO:0045765,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048565,GO:0048583,GO:0048584,GO:0048644,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048732,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050750,GO:0050789,GO:0050793,GO:0050794,GO:0050839,GO:0050896,GO:0051093,GO:0051128,GO:0051129,GO:0051146,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051248,GO:0051674,GO:0051716,GO:0055001,GO:0055002,GO:0055120,GO:0055123,GO:0060255,GO:0060278,GO:0060279,GO:0060322,GO:0060465,GO:0060548,GO:0061061,GO:0061245,GO:0061564,GO:0062023,GO:0065007,GO:0070013,GO:0070325,GO:0070848,GO:0070887,GO:0070925,GO:0071310,GO:0071363,GO:0071495,GO:0071704,GO:0071774,GO:0071840,GO:0071944,GO:0072347,GO:0072358,GO:0072359,GO:0080090,GO:0097435,GO:0097485,GO:0098657,GO:0098796,GO:0098797,GO:0099080,GO:0099081,GO:0099512,GO:0120036,GO:0120039,GO:1901135,GO:1901136,GO:1901137,GO:1901342,GO:1901343,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1902903,GO:1902904,GO:1905905,GO:1905906,GO:1905907,GO:2000026,GO:2000181,GO:2000241,GO:2000243,GO:2001260,GO:2001262 - 0.0006373 44.0
SYD3_k127_10756225_0 Rieske 2Fe-2S - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 486.0
SYD3_k127_10756225_1 Cell division protein FtsA K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000053 418.0
SYD3_k127_10756225_10 Abc transporter K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000004488 224.0
SYD3_k127_10756225_11 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000001464 204.0
SYD3_k127_10756225_12 UbiA prenyltransferase family K02548 GO:0000287,GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006766,GO:0006775,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009233,GO:0009234,GO:0009987,GO:0016020,GO:0016740,GO:0016765,GO:0032194,GO:0042180,GO:0042181,GO:0042362,GO:0042371,GO:0042373,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046428,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901576,GO:1901661,GO:1901663 2.5.1.74 0.00000000000000000000000000000000000000000000000000000005326 215.0
SYD3_k127_10756225_13 Rieske [2Fe-2S] domain K15060 - - 0.000000000000000000000000000000000000000000000000000001217 193.0
SYD3_k127_10756225_14 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000003362 205.0
SYD3_k127_10756225_15 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000005381 211.0
SYD3_k127_10756225_16 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.000000000000000000000000000000000000000000000001292 185.0
SYD3_k127_10756225_17 membrane - - - 0.000000000000000000000000000000000000000000002044 179.0
SYD3_k127_10756225_18 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.000000000000000000000000000000000000000001703 173.0
SYD3_k127_10756225_19 dephospho-CoA kinase activity K00859,K02318 GO:0000003,GO:0001667,GO:0002009,GO:0002064,GO:0002065,GO:0002066,GO:0002165,GO:0003006,GO:0003674,GO:0003824,GO:0004140,GO:0004595,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005759,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006928,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007300,GO:0007303,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0010631,GO:0015936,GO:0015937,GO:0016020,GO:0016301,GO:0016310,GO:0016477,GO:0016482,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019867,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0030707,GO:0030855,GO:0031090,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0040011,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046390,GO:0046483,GO:0046907,GO:0048468,GO:0048477,GO:0048513,GO:0048563,GO:0048569,GO:0048609,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0055086,GO:0055088,GO:0055090,GO:0060429,GO:0060562,GO:0065007,GO:0065008,GO:0070013,GO:0070328,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090130,GO:0090132,GO:0090407,GO:0098588,GO:0098805,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24,2.7.7.3 0.000000000000000000000000000000000000003054 154.0
SYD3_k127_10756225_2 ATPase associated with various cellular activities AAA_5 K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 360.0
SYD3_k127_10756225_20 Hydrolase of the alpha beta-hydrolase K07020 - - 0.000000000000000000000000000000001465 139.0
SYD3_k127_10756225_21 protein serine/threonine phosphatase activity - - - 0.0000000000443 76.0
SYD3_k127_10756225_22 Binds directly to 16S ribosomal RNA K02968 - - 0.000000007425 61.0
SYD3_k127_10756225_3 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 352.0
SYD3_k127_10756225_4 Quinone oxidoreductase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004849 310.0
SYD3_k127_10756225_5 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 292.0
SYD3_k127_10756225_6 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007621 272.0
SYD3_k127_10756225_7 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000003797 230.0
SYD3_k127_10756225_8 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000003665 220.0
SYD3_k127_10756225_9 Major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000006743 231.0
SYD3_k127_1128959_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 7.896e-314 986.0
SYD3_k127_1128959_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 3.965e-309 972.0
SYD3_k127_1128959_10 Arylsulfotransferase (ASST) - - - 0.00000000000000000000000000000000000000000000000000000000000000000004933 246.0
SYD3_k127_1128959_11 Enoyl-CoA hydratase isomerase K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000003134 206.0
SYD3_k127_1128959_12 3'-5' exonuclease activity K03547 - - 0.0000000000000000000000000000000000000000000000000000002223 205.0
SYD3_k127_1128959_13 - - - - 0.00000000000000000000000000000000000000000000001273 182.0
SYD3_k127_1128959_14 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.0000000000000000000000000000000000000000000002827 177.0
SYD3_k127_1128959_15 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000004986 170.0
SYD3_k127_1128959_16 peptidase C60 sortase A and B - - - 0.00000000000000000000000000000000000000000007058 170.0
SYD3_k127_1128959_17 lyase activity - - - 0.0000000000000000000000000000000000000000002333 171.0
SYD3_k127_1128959_18 Pfam:DUF385 - - - 0.00000000000000000000000000000000147 134.0
SYD3_k127_1128959_19 GIY-YIG catalytic domain K07461 - - 0.0000000000000000000000000000002538 124.0
SYD3_k127_1128959_2 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 7.273e-231 723.0
SYD3_k127_1128959_20 SnoaL-like domain - - - 0.000000000000000000000000000002932 125.0
SYD3_k127_1128959_21 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000007149 127.0
SYD3_k127_1128959_22 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000009966 136.0
SYD3_k127_1128959_23 Translation initiation factor SUI1 K03113 GO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0002190,GO:0002192,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0110017,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000004871 116.0
SYD3_k127_1128959_24 MFS_1 like family - - - 0.000000000000000000000000003173 126.0
SYD3_k127_1128959_25 enoyl-CoA hydratase K01692 - 4.2.1.17 0.0000000000000000000001081 101.0
SYD3_k127_1128959_26 Glyoxalase-like domain - - - 0.000005226 55.0
SYD3_k127_1128959_27 Protein of unknown function (DUF559) K03427 - 2.1.1.72 0.00004456 48.0
SYD3_k127_1128959_3 Rieske 2Fe-2S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007393 481.0
SYD3_k127_1128959_4 Alanine dehydrogenase/PNT, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003954 461.0
SYD3_k127_1128959_5 TIGRFAM luciferase family oxidoreductase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 354.0
SYD3_k127_1128959_6 7TM-HD extracellular K07037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 366.0
SYD3_k127_1128959_7 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006802 314.0
SYD3_k127_1128959_8 Amidohydrolase K03392,K22213 - 4.1.1.45,4.1.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003679 304.0
SYD3_k127_1128959_9 Pfam Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001111 268.0
SYD3_k127_1140798_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 2.472e-252 790.0
SYD3_k127_1140798_1 Zn-dependent dipeptidase, microsomal dipeptidase K01273 - 3.4.13.19 7.83e-236 749.0
SYD3_k127_1140798_10 feruloyl esterase activity K09252 GO:0000272,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010383,GO:0010393,GO:0010410,GO:0016052,GO:0016787,GO:0016788,GO:0016998,GO:0017144,GO:0030600,GO:0042737,GO:0042802,GO:0042803,GO:0043170,GO:0044036,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0045488,GO:0045490,GO:0045491,GO:0045493,GO:0046983,GO:0052689,GO:0071554,GO:0071704,GO:1901575 3.1.1.73 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000033 308.0
SYD3_k127_1140798_11 Major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001492 290.0
SYD3_k127_1140798_12 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346,K14161 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000001019 233.0
SYD3_k127_1140798_13 KR domain K10780 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004318,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.3.1.104 0.000000000000000000000000000000000000000000000000000000000000541 219.0
SYD3_k127_1140798_14 PFAM regulatory protein TetR - - - 0.0000000000000000000000000000000000000000000000000000001136 202.0
SYD3_k127_1140798_15 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000005453 173.0
SYD3_k127_1140798_16 Domain of unknown function (DUF4332) - - - 0.0000000000000000000000000000000000000002267 153.0
SYD3_k127_1140798_17 Nitroreductase family - - - 0.00000000000000000000000000000006981 136.0
SYD3_k127_1140798_19 - - - - 0.000000000006371 69.0
SYD3_k127_1140798_2 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 GO:0000731,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0018130,GO:0019438,GO:0019985,GO:0030312,GO:0031668,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0042276,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044464,GO:0046483,GO:0046677,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:1901360,GO:1901362,GO:1901576 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 595.0
SYD3_k127_1140798_20 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.00000003774 64.0
SYD3_k127_1140798_21 Sortase family - - - 0.0004094 51.0
SYD3_k127_1140798_3 acyl-CoA dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 502.0
SYD3_k127_1140798_4 nuclear chromosome segregation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 514.0
SYD3_k127_1140798_5 Rieske 2Fe-2S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 490.0
SYD3_k127_1140798_6 MATE efflux family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 480.0
SYD3_k127_1140798_7 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 416.0
SYD3_k127_1140798_8 NAD(P)H binding domain of trans-2-enoyl-CoA reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005723 330.0
SYD3_k127_1140798_9 Utp--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 315.0
SYD3_k127_1211612_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 2.379e-225 721.0
SYD3_k127_1211612_1 Amidohydrolase K03392,K10220 - 4.1.1.45,4.2.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 494.0
SYD3_k127_1211612_2 PFAM magnesium chelatase ChlI subunit K07391 - - 0.00000000000000000000000000000000000000000000000001608 184.0
SYD3_k127_1211612_3 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000002376 152.0
SYD3_k127_1211612_4 Protein of unknown function (DUF2851) - - - 0.0000000000000000006516 93.0
SYD3_k127_1211612_5 Transcriptional regulator - - - 0.000000000000002597 83.0
SYD3_k127_1211612_6 Helix-turn-helix - - - 0.000000000000005147 77.0
SYD3_k127_123592_0 shikimate 3-dehydrogenase (NADP+) activity K00800,K10669 GO:0003674,GO:0003824,GO:0003866,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19,2.7.1.160 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 400.0
SYD3_k127_123592_1 Polysaccharide biosynthesis protein K01784,K08679 - 5.1.3.2,5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 353.0
SYD3_k127_123592_10 transcriptional regulator - - - 0.000000000000000000000000000000000001192 141.0
SYD3_k127_123592_11 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000003124 134.0
SYD3_k127_123592_12 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000009874 79.0
SYD3_k127_123592_13 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000162 75.0
SYD3_k127_123592_14 Phosphotransferase enzyme family - - - 0.0000000000003971 81.0
SYD3_k127_123592_16 Carboxypeptidase regulatory-like domain - - - 0.000003676 59.0
SYD3_k127_123592_17 Phosphotransferase enzyme family - - - 0.0007271 52.0
SYD3_k127_123592_2 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 323.0
SYD3_k127_123592_3 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008622 316.0
SYD3_k127_123592_4 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 308.0
SYD3_k127_123592_5 ATPases associated with a variety of cellular activities K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000767 253.0
SYD3_k127_123592_6 ABC transporter (permease) K15599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004878 254.0
SYD3_k127_123592_7 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000002676 247.0
SYD3_k127_123592_8 Subtilase family K13277 - - 0.00000000000000000000000000000000000000000000000000000000000000002649 247.0
SYD3_k127_123592_9 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000001641 218.0
SYD3_k127_1258998_0 Baseplate J-like protein - - - 6.15e-236 771.0
SYD3_k127_1258998_1 Baseplate J-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000442 453.0
SYD3_k127_1258998_10 GPW gp25 family protein K06903 - - 0.0000000000000000000000000000000000000000006734 160.0
SYD3_k127_1258998_11 PAAR motif - - - 0.000000000000000000000000000000001682 131.0
SYD3_k127_1258998_12 Calcium/calmodulin dependent protein kinase II association domain - - - 0.0000000000000000000000000000000963 128.0
SYD3_k127_1258998_13 extracellular solute-binding protein, family 5 K02035 - - 0.00000000000000000000000000006469 134.0
SYD3_k127_1258998_14 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000002446 132.0
SYD3_k127_1258998_15 Domain of unknown function (DUF4157) - - - 0.00000000000000000000000007453 123.0
SYD3_k127_1258998_16 Rhs element vgr protein - - - 0.0000000000000000000000001669 123.0
SYD3_k127_1258998_17 cheY-homologous receiver domain - - - 0.0000000000000000001424 94.0
SYD3_k127_1258998_19 IclR helix-turn-helix domain - - - 0.000000000001342 78.0
SYD3_k127_1258998_2 Rieske (2fe-2S) K15060 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 396.0
SYD3_k127_1258998_20 Haem-degrading - - - 0.00000000002381 70.0
SYD3_k127_1258998_21 COG3637 Opacity protein and related surface antigens - - - 0.00000000007467 75.0
SYD3_k127_1258998_22 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000002673 68.0
SYD3_k127_1258998_23 Haem-degrading - - - 0.000000001393 69.0
SYD3_k127_1258998_24 NIPSNAP - - - 0.00007975 52.0
SYD3_k127_1258998_25 NIPSNAP family containing protein - - - 0.00009794 52.0
SYD3_k127_1258998_3 Phage tail protein (Tail_P2_I) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000441 334.0
SYD3_k127_1258998_4 LysM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001187 279.0
SYD3_k127_1258998_5 Late control gene D protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008053 280.0
SYD3_k127_1258998_6 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000414 247.0
SYD3_k127_1258998_7 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000453 216.0
SYD3_k127_1258998_8 - - - - 0.00000000000000000000000000000000000000000000000000001492 208.0
SYD3_k127_1258998_9 - - - - 0.000000000000000000000000000000000000000000000000001296 201.0
SYD3_k127_1373482_0 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 1.437e-222 717.0
SYD3_k127_1373482_1 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003907 448.0
SYD3_k127_1373482_10 TrkA-C domain K03499 - - 0.00000000000000000000000000000000000000000000000000000000000001496 222.0
SYD3_k127_1373482_11 retrograde transport, endosome to Golgi K07095 - - 0.00000000000000000000000000000000000000000000000000000000000004397 226.0
SYD3_k127_1373482_12 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000001935 215.0
SYD3_k127_1373482_13 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000006122 203.0
SYD3_k127_1373482_14 Peptidase family M50 K06212,K06402 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000001236 208.0
SYD3_k127_1373482_15 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000009107 199.0
SYD3_k127_1373482_16 TrkA-N domain K03499 - - 0.0000000000000000000000000000000000000007964 152.0
SYD3_k127_1373482_17 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000001284 154.0
SYD3_k127_1373482_18 Peptidase, M23 - - - 0.00000000000000000000000000000000003577 147.0
SYD3_k127_1373482_19 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000001048 142.0
SYD3_k127_1373482_2 Domain of unknown function (DUF1727) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006144 370.0
SYD3_k127_1373482_20 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000002057 135.0
SYD3_k127_1373482_21 cytochrome c biogenesis protein K07399 - - 0.00000000000000000000000000000003684 144.0
SYD3_k127_1373482_22 HpcH/HpaI aldolase/citrate lyase family - - - 0.0000000000000000000000000000006166 132.0
SYD3_k127_1373482_23 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000008158 139.0
SYD3_k127_1373482_24 AMP binding - - - 0.000000000000000005816 90.0
SYD3_k127_1373482_25 Metal-sensitive transcriptional repressor K21600 - - 0.000000000001977 67.0
SYD3_k127_1373482_26 Domain of unknown function (DUF3794) - - - 0.000000034 65.0
SYD3_k127_1373482_3 PFAM amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002331 276.0
SYD3_k127_1373482_4 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003296 272.0
SYD3_k127_1373482_5 Prephenate dehydratase K04518 - 4.2.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000004194 261.0
SYD3_k127_1373482_6 Alpha beta hydrolase K00433 - 1.11.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000001162 250.0
SYD3_k127_1373482_7 glutamine amidotransferase K07009 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001342 253.0
SYD3_k127_1373482_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000003625 238.0
SYD3_k127_1373482_9 Pfam Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000126 233.0
SYD3_k127_1397124_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 5.679e-309 961.0
SYD3_k127_1397124_1 MOSC domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 301.0
SYD3_k127_1397124_10 pyridoxamine 5-phosphate - - - 0.00001443 53.0
SYD3_k127_1397124_11 - - - - 0.00007137 51.0
SYD3_k127_1397124_2 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 314.0
SYD3_k127_1397124_3 Acyl-CoA dehydrogenase, C-terminal domain K22027 - 1.14.13.235 0.000000000000000000000000000000000000000000000000003854 198.0
SYD3_k127_1397124_4 4Fe-4S binding domain - - - 0.000000000000000000000000000000000004018 143.0
SYD3_k127_1397124_5 YCII-related domain K09780 - - 0.00000000000000000004326 93.0
SYD3_k127_1397124_6 PFAM Uncharacterised protein family UPF0150 - - - 0.000000000000004443 81.0
SYD3_k127_1397124_7 Aspartyl protease - - - 0.0000000000000211 77.0
SYD3_k127_1397124_8 HicA toxin of bacterial toxin-antitoxin, - - - 0.0000000003412 61.0
SYD3_k127_1397124_9 Pfam:Pyridox_oxidase - - - 0.0000004957 57.0
SYD3_k127_1400594_0 PFAM NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 455.0
SYD3_k127_1400594_1 acetyl-coa acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 347.0
SYD3_k127_1400594_10 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.000000000000000000000000000000000000000001451 159.0
SYD3_k127_1400594_11 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.0000000000000000000000000000000000000002478 153.0
SYD3_k127_1400594_12 CoA-transferase family III - - - 0.0000000000000000000000000000000000000002677 169.0
SYD3_k127_1400594_13 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000001024 134.0
SYD3_k127_1400594_14 Bacterial transcriptional regulator - - - 0.00000000000003082 82.0
SYD3_k127_1400594_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003327 278.0
SYD3_k127_1400594_3 acetyl-coa acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004601 282.0
SYD3_k127_1400594_4 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003813 268.0
SYD3_k127_1400594_5 PFAM SMP-30 Gluconolaconase LRE domain protein K01053 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000005656 246.0
SYD3_k127_1400594_6 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000002126 239.0
SYD3_k127_1400594_7 CoA-transferase family III K18702 - 2.8.3.19 0.00000000000000000000000000000000000000000000000000000000000003768 241.0
SYD3_k127_1400594_8 PFAM L-carnitine dehydratase bile acid-inducible protein F K18702 - 2.8.3.19 0.000000000000000000000000000000000000000000000000000000000004682 236.0
SYD3_k127_1400594_9 L-carnitine dehydratase bile acid-inducible protein F - - - 0.000000000000000000000000000000000000000000004243 188.0
SYD3_k127_1419971_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 1.071e-263 824.0
SYD3_k127_1419971_1 HELICc2 K03722 - 3.6.4.12 4.484e-222 723.0
SYD3_k127_1419971_10 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000000412 181.0
SYD3_k127_1419971_11 G5 domain protein - - - 0.00000000000000000000000000000000000006707 160.0
SYD3_k127_1419971_12 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000000000001041 146.0
SYD3_k127_1419971_14 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.000000000000000000000001973 104.0
SYD3_k127_1419971_15 alpha-ribazole phosphatase activity K01834,K15634 - 5.4.2.11,5.4.2.12 0.00000000000000000000001007 108.0
SYD3_k127_1419971_16 Serine aminopeptidase, S33 - - - 0.00000000000000000009342 98.0
SYD3_k127_1419971_17 AAA domain - - - 0.000000000000000004328 91.0
SYD3_k127_1419971_18 - - - - 0.0000000000000002364 81.0
SYD3_k127_1419971_19 Putative regulatory protein - - - 0.00000000000004825 76.0
SYD3_k127_1419971_2 Belongs to the ABC transporter superfamily K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 475.0
SYD3_k127_1419971_20 homoserine kinase activity K02204 - 2.7.1.39 0.0000000001179 73.0
SYD3_k127_1419971_22 Methyltransferase - - - 0.0000009744 61.0
SYD3_k127_1419971_24 - - - - 0.0004719 48.0
SYD3_k127_1419971_25 peptidase M20 - - - 0.0007563 44.0
SYD3_k127_1419971_3 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K02031,K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 443.0
SYD3_k127_1419971_4 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 377.0
SYD3_k127_1419971_5 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015,K15893 - 1.1.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007117 363.0
SYD3_k127_1419971_6 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005788 328.0
SYD3_k127_1419971_7 Belongs to the NadC ModD family K00767 GO:0003674,GO:0003824,GO:0004514,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016054,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034213,GO:0034641,GO:0034654,GO:0042737,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0046483,GO:0046496,GO:0046700,GO:0046874,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0072526,GO:0090407,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004512 289.0
SYD3_k127_1419971_8 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000001808 228.0
SYD3_k127_1419971_9 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000000000000000004015 188.0
SYD3_k127_1444021_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 555.0
SYD3_k127_1444021_1 Glucose / Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 523.0
SYD3_k127_1444021_2 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004196 509.0
SYD3_k127_1444021_3 Rieske 2Fe-2S - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 433.0
SYD3_k127_1444021_4 riboflavin synthase, alpha K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000006091 193.0
SYD3_k127_1444021_5 Major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000003904 201.0
SYD3_k127_1444021_6 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.00000000000000000000000000000000000000000000427 180.0
SYD3_k127_1444021_7 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000000000000000000004583 157.0
SYD3_k127_1444021_8 Protein of unknown function (DUF1679) - - - 0.00000000000000000000000000007066 130.0
SYD3_k127_1444021_9 Rieske [2Fe-2S] domain - - - 0.00000000000000001377 83.0
SYD3_k127_1447620_0 Methionine synthase K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000963 443.0
SYD3_k127_1447620_1 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 439.0
SYD3_k127_1447620_10 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000211 247.0
SYD3_k127_1447620_11 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000001545 215.0
SYD3_k127_1447620_12 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000003429 206.0
SYD3_k127_1447620_13 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00004,K00008,K05351,K08322 - 1.1.1.14,1.1.1.303,1.1.1.380,1.1.1.4,1.1.1.9 0.00000000000000000000000000000000000000000000000000000002509 209.0
SYD3_k127_1447620_14 ABC transporter substrate-binding protein K02035 - - 0.00000000000000000000000000000000001831 154.0
SYD3_k127_1447620_17 GYD domain - - - 0.000000000000000000000000000000197 126.0
SYD3_k127_1447620_18 extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000001603 140.0
SYD3_k127_1447620_19 Uncharacterized conserved protein (DUF2203) - - - 0.000000000000000000000000000005322 124.0
SYD3_k127_1447620_2 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead domain K03520 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 438.0
SYD3_k127_1447620_20 Endonuclease Exonuclease Phosphatase - - - 0.000000000000000002176 100.0
SYD3_k127_1447620_3 Rieske (2Fe-2S) domain-containing protein K15060 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 396.0
SYD3_k127_1447620_4 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008092 375.0
SYD3_k127_1447620_5 phosphogluconate dehydrogenase (decarboxylating) activity K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002672 344.0
SYD3_k127_1447620_6 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000605 343.0
SYD3_k127_1447620_7 PFAM isocitrate isopropylmalate dehydrogenase K05824 - 1.1.1.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003436 343.0
SYD3_k127_1447620_8 Putative modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007229 287.0
SYD3_k127_1447620_9 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000004786 263.0
SYD3_k127_1473935_0 PFAM Peptidase M16 inactive domain K07263 - - 2.518e-240 771.0
SYD3_k127_1473935_1 Rhodanese Homology Domain K01011,K21028 - 2.8.1.1,2.8.1.11,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 404.0
SYD3_k127_1473935_10 F420H(2)-dependent quinone reductase - - - 0.00000000000000000000000000000000000001741 149.0
SYD3_k127_1473935_11 membrane K08978,K12962 - - 0.0000000000000000000000000000000004188 143.0
SYD3_k127_1473935_12 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000003034 147.0
SYD3_k127_1473935_13 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000007636 130.0
SYD3_k127_1473935_14 phospholipase Carboxylesterase K06999 - - 0.0000000000000000000000000001213 125.0
SYD3_k127_1473935_15 Mov34 MPN PAD-1 family K21140 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006508,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008270,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016787,GO:0019344,GO:0019538,GO:0019752,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.13.1.6 0.00000000000000000000000009944 115.0
SYD3_k127_1473935_16 FtsZ-dependent cytokinesis - - - 0.0000000000000000000002066 108.0
SYD3_k127_1473935_17 - - - - 0.0000000000000000000009754 100.0
SYD3_k127_1473935_18 PFAM class II aldolase adducin family protein - - - 0.000000000000000003639 95.0
SYD3_k127_1473935_2 Methionine synthase K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004623 392.0
SYD3_k127_1473935_3 Rieske [2Fe-2S] domain K15060 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005809 359.0
SYD3_k127_1473935_4 FMN-dependent dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008198 336.0
SYD3_k127_1473935_5 Pfam Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005496 260.0
SYD3_k127_1473935_6 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.000000000000000000000000000000000000000000000000002077 191.0
SYD3_k127_1473935_7 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000002924 185.0
SYD3_k127_1473935_8 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000001669 180.0
SYD3_k127_1473935_9 methyltransferase - - - 0.00000000000000000000000000000000000000000000003542 181.0
SYD3_k127_1484402_0 GTP-binding protein TypA K06207 - - 5.489e-250 786.0
SYD3_k127_1484402_1 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K12952 - - 5.674e-218 702.0
SYD3_k127_1484402_10 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 285.0
SYD3_k127_1484402_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001012 274.0
SYD3_k127_1484402_12 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007766 241.0
SYD3_k127_1484402_13 acetyltransferase K03823 - 2.3.1.183 0.0000000000000000000000000000000000000000000000000000000000001916 216.0
SYD3_k127_1484402_14 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000005182 216.0
SYD3_k127_1484402_15 Pfam:Pyridox_oxidase - - - 0.000000000000000000000000000000000000000000000000000000002725 202.0
SYD3_k127_1484402_16 COG1921 Selenocysteine synthase seryl-tRNASer selenium transferase K01042 - 2.9.1.1 0.0000000000000000000000000000000000000000001029 177.0
SYD3_k127_1484402_17 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000001926 104.0
SYD3_k127_1484402_18 - - - - 0.00001778 53.0
SYD3_k127_1484402_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 460.0
SYD3_k127_1484402_3 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005511 393.0
SYD3_k127_1484402_4 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 395.0
SYD3_k127_1484402_5 SAICAR synthetase K01923 - 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 364.0
SYD3_k127_1484402_6 PFAM Cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 367.0
SYD3_k127_1484402_7 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 355.0
SYD3_k127_1484402_9 DinB family K18843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 292.0
SYD3_k127_1487815_0 ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003301 558.0
SYD3_k127_1487815_1 ABC transporter transmembrane region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 496.0
SYD3_k127_1487815_2 epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000542 123.0
SYD3_k127_1487815_3 asparagine synthase K01953 - 6.3.5.4 0.00000000003085 75.0
SYD3_k127_171386_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005006 580.0
SYD3_k127_171386_1 Rieske 2Fe-2S - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006761 511.0
SYD3_k127_171386_10 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009751 287.0
SYD3_k127_171386_11 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002124 259.0
SYD3_k127_171386_12 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006257 267.0
SYD3_k127_171386_13 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000009777 242.0
SYD3_k127_171386_14 Protein of unknown function (DUF1211) - - - 0.0000000000000000000000000000000000000000824 158.0
SYD3_k127_171386_15 acyl-CoA dehydrogenase activity - - - 0.0000000000000000000000000000000000000001093 167.0
SYD3_k127_171386_16 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000005109 149.0
SYD3_k127_171386_17 Thioredoxin-like [2Fe-2S] ferredoxin K00334,K18330,K22340 - 1.12.1.3,1.17.1.11,1.6.5.3 0.000000000000000000000001674 111.0
SYD3_k127_171386_18 PFAM Haloacid dehalogenase domain protein hydrolase K07025 - - 0.0000000000000000006275 95.0
SYD3_k127_171386_19 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000001987 87.0
SYD3_k127_171386_2 Belongs to the TPP enzyme family K01576 - 4.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004272 468.0
SYD3_k127_171386_20 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000002817 79.0
SYD3_k127_171386_21 Histidine kinase - - - 0.00000004114 58.0
SYD3_k127_171386_3 NADH dehydrogenase K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 448.0
SYD3_k127_171386_4 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005299 438.0
SYD3_k127_171386_5 Methionine synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000604 374.0
SYD3_k127_171386_6 Formate/nitrite transporter K06212 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004177 299.0
SYD3_k127_171386_7 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 299.0
SYD3_k127_171386_8 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008438 296.0
SYD3_k127_171386_9 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003069 283.0
SYD3_k127_1719171_0 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000000000000000000000000498 163.0
SYD3_k127_1719171_1 Selenoprotein B, glycine betaine sarcosine D-proline reductase family K10672 - 1.21.4.2 0.0000000000000006415 79.0
SYD3_k127_1719171_2 - - - - 0.0000000000001221 78.0
SYD3_k127_1719171_3 - - - - 0.0000000004586 69.0
SYD3_k127_1719171_4 Selenoprotein B, glycine betaine sarcosine D-proline reductase family K10672 - 1.21.4.2 0.000000007859 57.0
SYD3_k127_1788036_0 Belongs to the ClpA ClpB family K03694 - - 1.768e-281 885.0
SYD3_k127_1788036_1 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 392.0
SYD3_k127_1788036_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000002592 234.0
SYD3_k127_1788036_3 Pfam Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000001089 232.0
SYD3_k127_1788036_4 gluconolactonase activity K01053 - 3.1.1.17 0.000000000000000001067 93.0
SYD3_k127_1790987_0 Rieske 2Fe-2S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 522.0
SYD3_k127_1790987_1 ATPase associated with various cellular K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006069 434.0
SYD3_k127_1790987_10 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K06996 - - 0.000000000000000000000000000000000000001181 158.0
SYD3_k127_1790987_11 polyketide cyclase - - - 0.00000000000000000000000000000000000006727 153.0
SYD3_k127_1790987_12 Peptidase family M50 - - - 0.0000000000000000000000000000000001074 143.0
SYD3_k127_1790987_13 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000008678 93.0
SYD3_k127_1790987_14 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000001096 81.0
SYD3_k127_1790987_15 CAAX protease self-immunity K07052,K09696 - - 0.00000000000007663 82.0
SYD3_k127_1790987_16 mRNA catabolic process - - - 0.0000000002422 68.0
SYD3_k127_1790987_17 Ribosomal protein L34 K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000007297 64.0
SYD3_k127_1790987_18 Hsp70 protein K04046 - - 0.000001963 51.0
SYD3_k127_1790987_19 COG1520 FOG WD40-like repeat - - - 0.0003573 48.0
SYD3_k127_1790987_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 375.0
SYD3_k127_1790987_3 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000886 317.0
SYD3_k127_1790987_4 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000007655 240.0
SYD3_k127_1790987_5 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000003691 234.0
SYD3_k127_1790987_6 PFAM transglutaminase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000006026 250.0
SYD3_k127_1790987_7 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.000000000000000000000000000000000000000000000000000000003177 209.0
SYD3_k127_1790987_8 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000008763 192.0
SYD3_k127_1790987_9 PFAM Peptidase family M23 - - - 0.000000000000000000000000000000000000000006676 167.0
SYD3_k127_1816391_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 1.182e-257 803.0
SYD3_k127_1816391_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00122,K00335 - 1.17.1.9,1.6.5.3 5.502e-235 746.0
SYD3_k127_1816391_2 2Fe-2S iron-sulfur cluster binding domain K00336 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 425.0
SYD3_k127_1816391_3 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 308.0
SYD3_k127_1816391_4 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000001024 224.0
SYD3_k127_1816391_5 myo-inosose-2 dehydratase activity K01805 - 5.3.1.5 0.00000000000000000000000000000000001709 148.0
SYD3_k127_1816391_6 Molybdopterin oxidoreductase K00123 - 1.17.1.9 0.0000000000000000000000000000001029 126.0
SYD3_k127_1816391_7 Cd(II) Pb(II)-responsive transcriptional regulator K19591 - - 0.000000000000000000106 94.0
SYD3_k127_1825154_0 Heavy metal translocating P-type atpase K01533 - 3.6.3.4 1.193e-223 720.0
SYD3_k127_1825154_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 406.0
SYD3_k127_1825154_2 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 291.0
SYD3_k127_1825154_3 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000000006317 166.0
SYD3_k127_1825154_4 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000007257 120.0
SYD3_k127_1825154_5 stress protein (general stress protein 26) - - - 0.00000000000000000000001631 110.0
SYD3_k127_1825154_6 Cytidylate kinase-like family - - - 0.00000000000003544 81.0
SYD3_k127_1857322_0 NAD synthase K01916 - 6.3.1.5 3.427e-220 696.0
SYD3_k127_1857322_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 426.0
SYD3_k127_1857322_10 Glycosyltransferase family 87 K13671 GO:0000026,GO:0000030,GO:0003674,GO:0003824,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0070085,GO:0071704,GO:0097502,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.00002045 57.0
SYD3_k127_1857322_2 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000001797 190.0
SYD3_k127_1857322_3 Glycosyl transferase, family 2 K07011 - - 0.000000000000000000000000000000000000000000000003566 179.0
SYD3_k127_1857322_4 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.000000000000000000000000000000000000000002318 169.0
SYD3_k127_1857322_5 - - - - 0.0000000000000000000000000000002141 128.0
SYD3_k127_1857322_6 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0030312,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.000000000000000004303 92.0
SYD3_k127_1857322_7 Putative adhesin - - - 0.000000000007939 78.0
SYD3_k127_1857322_8 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 GO:0003674,GO:0003824,GO:0004596,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031365,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.128 0.00000001639 63.0
SYD3_k127_1857322_9 protein encoded in hypervariable junctions of pilus gene clusters - - - 0.0000003862 59.0
SYD3_k127_1963337_0 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001822 284.0
SYD3_k127_1963337_1 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K03929 - - 0.00000000000000000000000000000000000000000000000000000000000000003213 233.0
SYD3_k127_1963337_2 PFAM NIPSNAP family containing protein - - - 0.00000000000000000000000000000000453 134.0
SYD3_k127_1963337_3 FR47-like protein - - - 0.00000000000000000000000000001422 123.0
SYD3_k127_1963337_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K06996 - - 0.00000000000000000000000004797 113.0
SYD3_k127_1963337_5 Adenylate cyclase regulatory domain - - - 0.000000000000000000000000811 118.0
SYD3_k127_1985691_0 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000001426 224.0
SYD3_k127_1985691_1 PFAM glycosyl transferase, family 28 - - - 0.0000000000000000000000000000000000000000004845 174.0
SYD3_k127_1985691_2 PFAM glycosyl transferase, family 28 - - - 0.000000000000000000000000000000000000000001536 174.0
SYD3_k127_1985691_3 Rieske [2Fe-2S] domain - - - 0.000000000005829 68.0
SYD3_k127_2013592_0 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007529 413.0
SYD3_k127_2013592_1 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000000000000000000000000002627 226.0
SYD3_k127_2013592_2 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000003894 200.0
SYD3_k127_2013592_3 acyl-CoA dehydrogenase - - - 0.00000000000000000000000004045 115.0
SYD3_k127_2013592_4 PFAM Rieske 2Fe-2S domain protein - - - 0.00000000004024 64.0
SYD3_k127_2070484_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0 1340.0
SYD3_k127_2070484_1 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 450.0
SYD3_k127_2070484_10 Rieske-like [2Fe-2S] domain K05710 - - 0.0000000000000001181 85.0
SYD3_k127_2070484_11 Anti-sigma-K factor rskA - - - 0.0000000000004848 78.0
SYD3_k127_2070484_12 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.00000008347 64.0
SYD3_k127_2070484_13 TIGRFAM diguanylate cyclase (GGDEF) domain - - - 0.0000001432 59.0
SYD3_k127_2070484_2 Binding-protein-dependent transport system inner membrane component K15581 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 353.0
SYD3_k127_2070484_3 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 332.0
SYD3_k127_2070484_4 N-terminal TM domain of oligopeptide transport permease C K15582 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008693 320.0
SYD3_k127_2070484_5 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000006339 244.0
SYD3_k127_2070484_6 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000001765 220.0
SYD3_k127_2070484_7 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000244 162.0
SYD3_k127_2070484_9 ECF sigma factor K03088 - - 0.0000000000000000000000000000038 131.0
SYD3_k127_2079949_0 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001611 284.0
SYD3_k127_2079949_1 PFAM short-chain dehydrogenase reductase SDR K00023,K00059 - 1.1.1.100,1.1.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000001833 254.0
SYD3_k127_2079949_2 Protein of unknown function (DUF2889) K07053 - 3.1.3.97 0.000000000000000000000000000000000000007945 153.0
SYD3_k127_2079949_3 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000815 132.0
SYD3_k127_2079949_4 MaoC like domain - - - 0.00000000000000000000000000000144 126.0
SYD3_k127_2079949_5 N-terminal half of MaoC dehydratase - - - 0.000000000000000000000008652 106.0
SYD3_k127_2098303_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 1.194e-206 655.0
SYD3_k127_2098303_1 Domain in cystathionine beta-synthase and other proteins. K14446 - 1.3.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007696 541.0
SYD3_k127_2098303_10 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002403 258.0
SYD3_k127_2098303_11 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000001517 239.0
SYD3_k127_2098303_12 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000003033 218.0
SYD3_k127_2098303_13 TIGRFAM pyruvate ferredoxin flavodoxin oxidoreductase, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000071 212.0
SYD3_k127_2098303_14 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000007027 197.0
SYD3_k127_2098303_15 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000005918 183.0
SYD3_k127_2098303_16 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000005273 148.0
SYD3_k127_2098303_17 Ferric uptake regulator family K03711 - - 0.00000000000000000000000000000000001602 139.0
SYD3_k127_2098303_18 haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.00000000000000000000000000000000009679 141.0
SYD3_k127_2098303_19 OsmC-like protein K06889,K07397 - - 0.000000000000000000000000000009659 125.0
SYD3_k127_2098303_2 L-lysine 6-monooxygenase (NADPH-requiring) K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 421.0
SYD3_k127_2098303_20 adenylate kinase activity - - - 0.00000000000000000000000000003917 125.0
SYD3_k127_2098303_21 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000000175 123.0
SYD3_k127_2098303_22 PFAM metal-dependent phosphohydrolase, HD sub domain K02103,K02529 - - 0.00000000000000000000000001832 123.0
SYD3_k127_2098303_23 - - - - 0.00000000000000000000002414 110.0
SYD3_k127_2098303_24 PFAM O-antigen polymerase - - - 0.00000000001398 78.0
SYD3_k127_2098303_26 Cytidylate kinase-like family - - - 0.000001143 59.0
SYD3_k127_2098303_3 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 403.0
SYD3_k127_2098303_4 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 369.0
SYD3_k127_2098303_5 ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 373.0
SYD3_k127_2098303_6 Amidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 304.0
SYD3_k127_2098303_7 Ketopantoate reductase PanE/ApbA C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007892 286.0
SYD3_k127_2098303_8 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001957 284.0
SYD3_k127_2098303_9 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002753 256.0
SYD3_k127_2157849_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1241.0
SYD3_k127_2157849_1 Protein of unknown function (DUF2889) K07053 - 3.1.3.97 0.000000000000000000000000000000000000006851 154.0
SYD3_k127_2157849_2 Phage integrase family - - - 0.000000000000008495 84.0
SYD3_k127_2157849_3 MarR family - - - 0.00000005348 64.0
SYD3_k127_2178620_0 ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 413.0
SYD3_k127_2178620_1 Taurine catabolism dioxygenase TauD, TfdA family K06912 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 342.0
SYD3_k127_2178620_2 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000004163 256.0
SYD3_k127_2178620_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000014 261.0
SYD3_k127_2178620_4 ethanolamine kinase activity K07251 - 2.7.1.89 0.00000000000000000007743 106.0
SYD3_k127_2178620_5 Sulfotransferase family - - - 0.000000000000000002185 96.0
SYD3_k127_217912_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.799e-227 717.0
SYD3_k127_217912_1 peptidase, M20 - - - 1.32e-202 641.0
SYD3_k127_217912_10 histidine kinase A domain protein K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009661 326.0
SYD3_k127_217912_11 signal peptide processing K13280 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000001566 261.0
SYD3_k127_217912_12 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000009336 229.0
SYD3_k127_217912_13 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000001102 208.0
SYD3_k127_217912_14 LysR substrate binding domain - - - 0.00000000000000000000000000000000265 141.0
SYD3_k127_217912_15 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.000000000000000000000000000001605 137.0
SYD3_k127_217912_16 Transcriptional regulator - - - 0.000000000000000000000005506 111.0
SYD3_k127_217912_17 - - - - 0.0000000000000000000008126 105.0
SYD3_k127_217912_18 ABC-type dipeptide transport system periplasmic component K02035 - - 0.00000000000000000003404 106.0
SYD3_k127_217912_19 guanyl-nucleotide exchange factor activity K05349,K13735,K18491,K20276 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 3.2.1.21 0.000000000000000006462 99.0
SYD3_k127_217912_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K07306,K08352 - 1.8.5.3,1.8.5.5 4.974e-199 647.0
SYD3_k127_217912_20 - - - - 0.000000000000003668 80.0
SYD3_k127_217912_21 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.00000000008335 66.0
SYD3_k127_217912_23 CopG antitoxin of type II toxin-antitoxin system - - - 0.0000003609 56.0
SYD3_k127_217912_24 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.000001221 62.0
SYD3_k127_217912_25 Domain of unknown function (DUF4157) - - - 0.0001577 49.0
SYD3_k127_217912_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 584.0
SYD3_k127_217912_4 PFAM Hydantoinase B oxoprolinase K01474 - 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008268 576.0
SYD3_k127_217912_5 Hydantoinaseoxoprolinase domain protein K01473 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004155 555.0
SYD3_k127_217912_6 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 417.0
SYD3_k127_217912_7 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 377.0
SYD3_k127_217912_8 Amino-transferase class IV K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 362.0
SYD3_k127_217912_9 FMN-dependent dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 337.0
SYD3_k127_2243701_0 Methionine synthase K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 434.0
SYD3_k127_2243701_1 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 310.0
SYD3_k127_2243701_10 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.00000000000000000000001521 117.0
SYD3_k127_2243701_11 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000006374 100.0
SYD3_k127_2243701_12 Amidohydrolase - - - 0.000000000000000001324 93.0
SYD3_k127_2243701_13 Ferrodoxin reductase-like protein - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005758,GO:0005829,GO:0006323,GO:0006915,GO:0006919,GO:0006950,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008219,GO:0009893,GO:0009987,GO:0010257,GO:0010604,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012501,GO:0016020,GO:0016043,GO:0016174,GO:0016491,GO:0016651,GO:0019222,GO:0019866,GO:0022008,GO:0022607,GO:0023052,GO:0030154,GO:0030162,GO:0030182,GO:0030261,GO:0031090,GO:0031323,GO:0031325,GO:0031966,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032981,GO:0033108,GO:0033554,GO:0034622,GO:0034976,GO:0035556,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043280,GO:0043281,GO:0043933,GO:0044085,GO:0044093,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045862,GO:0048471,GO:0048518,GO:0048522,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050664,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051276,GO:0051336,GO:0051345,GO:0051716,GO:0052547,GO:0052548,GO:0055114,GO:0060255,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070059,GO:0071103,GO:0071840,GO:0080090,GO:0097190,GO:0097193,GO:2000116,GO:2001056 - 0.00000000000002608 79.0
SYD3_k127_2243701_14 PFAM Pentapeptide repeats (8 copies) - - - 0.00000000009434 71.0
SYD3_k127_2243701_15 N-terminal half of MaoC dehydratase - - - 0.0000000001971 70.0
SYD3_k127_2243701_16 acyl-CoA transferases carnitine dehydratase - - - 0.00001857 47.0
SYD3_k127_2243701_2 CoA-transferase family III K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000006188 273.0
SYD3_k127_2243701_3 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002367 256.0
SYD3_k127_2243701_4 cell redox homeostasis - - - 0.0000000000000000000000000000000000000000000000000000000000003767 224.0
SYD3_k127_2243701_5 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000007174 202.0
SYD3_k127_2243701_6 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000008095 193.0
SYD3_k127_2243701_7 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000008523 186.0
SYD3_k127_2243701_8 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity - - - 0.00000000000000000000000000000000000000009771 159.0
SYD3_k127_2243701_9 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000001781 123.0
SYD3_k127_2266781_0 Uncharacterized membrane protein (DUF2298) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 356.0
SYD3_k127_2266781_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 333.0
SYD3_k127_2266781_2 PFAM 3-demethylubiquinone-9 K04750 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002654 242.0
SYD3_k127_2266781_3 PFAM NHL repeat containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000006386 235.0
SYD3_k127_2266781_4 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.00000000000000000000000000000000000000000000008077 173.0
SYD3_k127_2266781_5 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.000000000000000000000000000000000000000000004484 164.0
SYD3_k127_2266781_6 bifunctional deaminase-reductase domain protein - - - 0.0000000000000000000000000000004057 125.0
SYD3_k127_23061_0 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 1.019e-208 657.0
SYD3_k127_23061_1 von Willebrand factor (vWF) type A domain - - - 5.035e-200 646.0
SYD3_k127_23061_10 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000209 185.0
SYD3_k127_23061_11 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000007972 185.0
SYD3_k127_23061_12 NUDIX domain - - - 0.0000000000000000000000000000000000000000002896 163.0
SYD3_k127_23061_13 COG0346 Lactoylglutathione lyase and related lyases K07032 - - 0.00000000000000000000000000001997 122.0
SYD3_k127_23061_14 ABC transporter substrate-binding protein K02035 - - 0.00000000000000000000000000419 128.0
SYD3_k127_23061_15 Regulatory protein, FmdB family - - - 0.0000000000007804 73.0
SYD3_k127_23061_16 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.000000000001528 78.0
SYD3_k127_23061_17 COG2931, RTX toxins and related Ca2 -binding proteins K12549,K20276 - - 0.000000009773 62.0
SYD3_k127_23061_18 Diguanylate cyclase with PAS PAC sensor - - - 0.0003061 52.0
SYD3_k127_23061_2 succinate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002627 606.0
SYD3_k127_23061_3 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000871 372.0
SYD3_k127_23061_4 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000889 364.0
SYD3_k127_23061_5 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008092 268.0
SYD3_k127_23061_6 Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000003835 237.0
SYD3_k127_23061_7 TIM-barrel fold metal-dependent hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000007823 234.0
SYD3_k127_23061_8 Domain of unknown function (DUF1932) - - - 0.00000000000000000000000000000000000000000000000000000000000003723 227.0
SYD3_k127_23061_9 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000000004176 218.0
SYD3_k127_2357393_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1135.0
SYD3_k127_2357393_1 Periplasmic component of the Tol biopolymer transport system - - - 0.0000000000000002551 91.0
SYD3_k127_2357393_3 Hydrolase, alpha beta domain protein K06889 - - 0.0001124 53.0
SYD3_k127_2372456_0 Acyl-CoA dehydrogenase, C-terminal domain K22027 - 1.14.13.235 0.000000000000000000000000000000000000000000000000000000000000000000000003944 258.0
SYD3_k127_2372456_1 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.00000000000000000000000000000000000000000000006708 174.0
SYD3_k127_2372456_2 TonB-dependent Receptor Plug Domain K02014 - - 0.000000000000000000000000000000000007616 145.0
SYD3_k127_2372456_3 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.0000000000000000000000000000003428 124.0
SYD3_k127_2372456_4 Binds the 23S rRNA K02909 - - 0.000000000000000000000000003845 112.0
SYD3_k127_2372456_5 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.0000000000000000000000003598 110.0
SYD3_k127_2372456_6 XdhC and CoxI family - - - 0.000000000000000000001028 98.0
SYD3_k127_2372456_7 F420-dependent oxidoreductase - - - 0.00000002885 56.0
SYD3_k127_2372456_8 - - - - 0.0000008391 57.0
SYD3_k127_2372456_9 Transposase and inactivated derivatives - - - 0.0005787 45.0
SYD3_k127_2438314_0 ACT domain K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 512.0
SYD3_k127_2438314_1 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003071 451.0
SYD3_k127_2438314_10 Phosphoglycerate mutase - - - 0.000000000000002056 86.0
SYD3_k127_2438314_11 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00003284 57.0
SYD3_k127_2438314_2 Belongs to the peptidase M16 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007216 370.0
SYD3_k127_2438314_3 PFAM IstB domain protein ATP-binding protein K02315 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 337.0
SYD3_k127_2438314_4 PFAM ATP corrinoid adenosyltransferase BtuR CobO CobP K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000002429 222.0
SYD3_k127_2438314_5 proteolysis K07059 - - 0.00000000000000000000000000000000000000000000000000001887 197.0
SYD3_k127_2438314_6 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000001497 154.0
SYD3_k127_2438314_7 Replication initiation and membrane attachment - - - 0.00000000000000000000000000000000007802 153.0
SYD3_k127_2438314_8 Binds to the 23S rRNA K02939 - - 0.00000000000000000000000000004803 122.0
SYD3_k127_2438314_9 ATP hydrolysis coupled proton transport - - - 0.000000000000000000003953 108.0
SYD3_k127_2459569_0 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000007961 246.0
SYD3_k127_2459569_1 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000004195 234.0
SYD3_k127_2459569_2 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00042 - 1.1.1.60 0.000000000000000000000000000000000000000000000000000000001831 210.0
SYD3_k127_2459569_3 aerobic-type carbon monoxide dehydrogenase, small subunit CoxS K03518,K20446 - 1.17.1.5,1.2.5.3 0.000000000000000000000000000000000000000000003464 174.0
SYD3_k127_2459569_4 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.0000000000000000000000000000000009962 142.0
SYD3_k127_2459569_5 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0030490,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 - 0.00000000000000000000000000000001307 136.0
SYD3_k127_2459569_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000009679 115.0
SYD3_k127_2459569_7 Protein of unknown function (DUF983) - - - 0.00000000000000000001143 101.0
SYD3_k127_2459569_8 KH domain K06960 - - 0.000000000000000004345 85.0
SYD3_k127_2557772_0 Belongs to the AAA ATPase family K13525 - - 2.503e-267 841.0
SYD3_k127_2557772_1 Chromate transporter K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 464.0
SYD3_k127_2557772_10 PFAM sigma-70 region 2 domain protein K03088 - - 0.00000000000000000000000000000000000000000000000006319 184.0
SYD3_k127_2557772_11 Bacterial regulatory protein, arsR family - - - 0.0000000000000000000000000000000000000000001273 166.0
SYD3_k127_2557772_12 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000001411 165.0
SYD3_k127_2557772_13 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000002286 158.0
SYD3_k127_2557772_14 Protein of unknown function (DUF3037) - - - 0.0000000000000000000000000000000000000002905 154.0
SYD3_k127_2557772_15 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000001565 144.0
SYD3_k127_2557772_16 Protein of unknown function (DUF541) K09807 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.00000000000000000000000001004 123.0
SYD3_k127_2557772_17 sptr c4rri0 - - - 0.000000000000000000001921 107.0
SYD3_k127_2557772_18 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000002422 96.0
SYD3_k127_2557772_19 Antibiotic biosynthesis monooxygenase - - - 0.000000000005401 76.0
SYD3_k127_2557772_2 DmpG-like communication domain K01666 - 4.1.3.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 417.0
SYD3_k127_2557772_20 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000004586 69.0
SYD3_k127_2557772_21 Copper binding proteins, plastocyanin/azurin family - - - 0.0000000008855 67.0
SYD3_k127_2557772_22 S23 ribosomal protein - - - 0.00000001672 60.0
SYD3_k127_2557772_23 AntiSigma factor - - - 0.000001669 58.0
SYD3_k127_2557772_24 Lipid A biosynthesis K02517 - 2.3.1.241 0.000004374 58.0
SYD3_k127_2557772_3 beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 374.0
SYD3_k127_2557772_4 Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD( ) and coenzyme A. Is the final enzyme in the meta- cleavage pathway for the degradation of aromatic compounds K04073 - 1.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000949 351.0
SYD3_k127_2557772_5 Rieske 2Fe-2S - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 350.0
SYD3_k127_2557772_6 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003104 336.0
SYD3_k127_2557772_7 Methionine synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003956 316.0
SYD3_k127_2557772_8 Serine threonine protein kinase involved in cell cycle control - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000039 276.0
SYD3_k127_2557772_9 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000003451 257.0
SYD3_k127_2635237_0 PFAM tRNA rRNA methyltransferase (SpoU) K03437 - - 0.000000000000000000000000000000000000000000000000000000000000001775 227.0
SYD3_k127_2635237_1 phosphatidylinositol kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000001856 223.0
SYD3_k127_2635237_2 glyoxalase III activity - - - 0.00000000000000000000000000000000000000000000000000000000000002088 222.0
SYD3_k127_2635237_3 pfam abc K02074,K09820,K11710 - - 0.0000000000000000000000000000000000000000000000000000000001289 213.0
SYD3_k127_2635237_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000009547 198.0
SYD3_k127_2635237_5 Flavin reductase like domain - - - 0.000000000000000000000000000000000000000000000009194 176.0
SYD3_k127_2635237_6 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000004345 141.0
SYD3_k127_2635237_7 ABC-type Mn2 Zn2 transport systems permease components K09819 - - 0.000000000000000007272 87.0
SYD3_k127_2671479_0 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000009138 218.0
SYD3_k127_2671479_1 HD domain - - - 0.00000000000000000000000000000000000000000000000003482 187.0
SYD3_k127_2671479_10 Family of unknown function (DUF5317) - - - 0.00002837 57.0
SYD3_k127_2671479_11 Glycosyltransferase family 87 - - - 0.0008722 51.0
SYD3_k127_2671479_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000007827 182.0
SYD3_k127_2671479_3 Glycosyl transferases group 1 K19424 - - 0.00000000000000000000000000000000000000000000005259 186.0
SYD3_k127_2671479_4 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000002125 166.0
SYD3_k127_2671479_5 oligosaccharyl transferase activity - - - 0.0000000000000000000000000008717 129.0
SYD3_k127_2671479_6 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000003617 111.0
SYD3_k127_2671479_7 - - - - 0.00000000000000000000251 106.0
SYD3_k127_2671479_8 GlcNAc-PI de-N-acetylase - - - 0.000000000000006027 86.0
SYD3_k127_2671479_9 - - - - 0.0000003848 59.0
SYD3_k127_2807751_0 Acetohydroxy acid isomeroreductase, catalytic domain K00053 - 1.1.1.86 5.72e-213 671.0
SYD3_k127_2807751_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009467 481.0
SYD3_k127_2807751_10 LPPG Fo 2-phospho-L-lactate transferase K11212 - 2.7.8.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 300.0
SYD3_k127_2807751_11 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001464 284.0
SYD3_k127_2807751_12 Aspartyl Asparaginyl beta-hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003384 278.0
SYD3_k127_2807751_13 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002096 284.0
SYD3_k127_2807751_14 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005587 249.0
SYD3_k127_2807751_15 Polysaccharide deacetylase K01448,K22278 - 3.5.1.104,3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000001879 238.0
SYD3_k127_2807751_16 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000000000001487 192.0
SYD3_k127_2807751_17 Asymmetrically hydrolyzes Ap4p to yield AMP and ATP K01090,K01525 GO:0003674,GO:0003824,GO:0004721,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008138,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564 3.1.3.16,3.6.1.41 0.000000000000000000000000000000000000000000002426 170.0
SYD3_k127_2807751_18 stress protein (general stress protein 26) - - - 0.000000000000000000000000000000000000000001923 167.0
SYD3_k127_2807751_19 TIGRFAM PAS domain S-box - - - 0.00000000000000000000000000000000000000007408 156.0
SYD3_k127_2807751_2 COG0277 FAD FMN-containing dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004326 446.0
SYD3_k127_2807751_20 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000001369 162.0
SYD3_k127_2807751_21 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015,K00090 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0016618,GO:0030267,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.1.1.215,1.1.1.26,1.1.1.79,1.1.1.81 0.0000000000000000000000000000000000000004653 161.0
SYD3_k127_2807751_22 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000003331 151.0
SYD3_k127_2807751_23 nitric oxide dioxygenase activity K17247 - - 0.0000000000000000000000000000001964 133.0
SYD3_k127_2807751_24 AI-2E family transporter - - - 0.000000000000000000000000000001206 135.0
SYD3_k127_2807751_25 nitric oxide dioxygenase activity K17247 - - 0.0000000000000000000000002253 116.0
SYD3_k127_2807751_27 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0000000000000000002772 98.0
SYD3_k127_2807751_28 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.0000000000000000008434 100.0
SYD3_k127_2807751_29 - K09932 - - 0.00000000000000003043 85.0
SYD3_k127_2807751_3 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005589 438.0
SYD3_k127_2807751_30 Guanylyltransferase that catalyzes the activation of 2- phospho-L-lactate (LP) as (2S)-lactyl-2-diphospho-5'-guanosine (LPPG), via the condensation of LP with GTP. Is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor K14941 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0043814,GO:0044237,GO:0044249,GO:0051186,GO:0051188,GO:0070568 2.7.7.68 0.000000000000007177 83.0
SYD3_k127_2807751_31 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000002804 81.0
SYD3_k127_2807751_4 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000439 396.0
SYD3_k127_2807751_5 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 380.0
SYD3_k127_2807751_6 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009803 370.0
SYD3_k127_2807751_7 Belongs to the HpcH HpaI aldolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005557 358.0
SYD3_k127_2807751_8 PFAM NMT1 THI5 like domain protein K02051,K15598 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 356.0
SYD3_k127_2807751_9 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 306.0
SYD3_k127_2845874_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 4.17e-210 661.0
SYD3_k127_2845874_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 571.0
SYD3_k127_2845874_10 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001548 265.0
SYD3_k127_2845874_11 Glycosyl transferase 4-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000001833 248.0
SYD3_k127_2845874_12 GtrA-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000003664 240.0
SYD3_k127_2845874_13 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000008103 229.0
SYD3_k127_2845874_14 Sugar transferase - - - 0.0000000000000000000000000000000000000000000001485 178.0
SYD3_k127_2845874_15 Cytochrome b(C-terminal)/b6/petD - - - 0.0000000000000000000000000000000000000007767 161.0
SYD3_k127_2845874_16 methyltransferase K15471 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0009273,GO:0009987,GO:0016020,GO:0016043,GO:0016740,GO:0016741,GO:0022607,GO:0032259,GO:0042546,GO:0044085,GO:0044464,GO:0071554,GO:0071766,GO:0071770,GO:0071840,GO:0071944 - 0.000000000000000000000000000000000004016 157.0
SYD3_k127_2845874_17 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000001818 129.0
SYD3_k127_2845874_18 Methylmuconolactone methyl-isomerase - - - 0.0000000000000000000000000000006819 130.0
SYD3_k127_2845874_19 PKD domain containing protein - - - 0.0000000000000000000000000003695 126.0
SYD3_k127_2845874_2 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 504.0
SYD3_k127_2845874_20 PFAM Rieske 2Fe-2S domain K02636 - 1.10.9.1 0.0000000000000000000000000307 121.0
SYD3_k127_2845874_21 COG2133 Glucose sorbosone dehydrogenases - - - 0.0000000000000005699 91.0
SYD3_k127_2845874_22 - - - - 0.000000000000001317 90.0
SYD3_k127_2845874_23 23S rRNA-intervening sequence protein - - - 0.00000000000004728 78.0
SYD3_k127_2845874_24 Acetyltransferase (GNAT) domain - - - 0.00003188 55.0
SYD3_k127_2845874_3 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 439.0
SYD3_k127_2845874_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 424.0
SYD3_k127_2845874_5 CoA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003294 403.0
SYD3_k127_2845874_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005099 321.0
SYD3_k127_2845874_7 Cytochrome b(N-terminal)/b6/petB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 317.0
SYD3_k127_2845874_8 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 321.0
SYD3_k127_2845874_9 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 310.0
SYD3_k127_288357_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372,K02567 - - 1.353e-222 730.0
SYD3_k127_288357_1 Nitrite and sulphite reductase 4Fe-4S domain K00366 - 1.7.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 521.0
SYD3_k127_288357_10 YjbR - - - 0.00000000000000000000000000000000000000000000000001007 182.0
SYD3_k127_288357_11 COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family - - - 0.00000000000000000000000000003952 122.0
SYD3_k127_288357_12 Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 0.0000000000000000000000000001119 133.0
SYD3_k127_288357_13 PFAM GGDEF domain - - - 0.00003972 53.0
SYD3_k127_288357_2 COG2223 Nitrate nitrite transporter K02575 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004967 418.0
SYD3_k127_288357_3 4-hydroxyphenylacetate 3-hydroxylase C terminal K00483 - 1.14.14.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 389.0
SYD3_k127_288357_4 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 374.0
SYD3_k127_288357_5 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003694 362.0
SYD3_k127_288357_6 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 340.0
SYD3_k127_288357_7 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity K06188 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 315.0
SYD3_k127_288357_8 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002673 272.0
SYD3_k127_288357_9 - - - - 0.000000000000000000000000000000000000000000000000000000001569 213.0
SYD3_k127_29027_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 333.0
SYD3_k127_29027_1 Aldolase/RraA - - - 0.000000000000000000000000000000000000000000000000000000000000000001193 234.0
SYD3_k127_29027_2 Aldolase/RraA - - - 0.00000000000000000000000000000000000000000000000000000000000000004982 229.0
SYD3_k127_29027_3 Glycosyltransferase family 87 - - - 0.000000000000000000000000000000000000000000000000000000002499 216.0
SYD3_k127_29027_4 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000002247 159.0
SYD3_k127_2950819_0 COG0433 Predicted ATPase K06915 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002935 526.0
SYD3_k127_2950819_1 Protein of unknown function (DUF3500) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 410.0
SYD3_k127_2950819_2 DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation K05592 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000308 343.0
SYD3_k127_2950819_3 ATPase involved in DNA repair K03546 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002778 289.0
SYD3_k127_2950819_4 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03547 - - 0.000000000000000000000000000000000000000000000000000000000001008 237.0
SYD3_k127_2950819_5 COGs COG2380 conserved - - - 0.000000000000000000000000000000000000000006188 168.0
SYD3_k127_2950819_6 von Willebrand factor, type A K07114 - - 0.00000000000000000000000001185 116.0
SYD3_k127_2959252_0 acetyl-coa acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006809 416.0
SYD3_k127_2959252_1 Amidohydrolase K07045,K14333,K15063,K20941 - 4.1.1.103,4.1.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004617 362.0
SYD3_k127_2959252_2 pyrroloquinoline quinone binding - - - 0.00000000000000000000000001621 115.0
SYD3_k127_2971148_0 unusual protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001717 286.0
SYD3_k127_2971148_1 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008208 271.0
SYD3_k127_2971148_2 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000002175 203.0
SYD3_k127_2971148_3 catechol 2,3-dioxygenase activity - - - 0.0000000000000000000000000000000000000000000000001526 181.0
SYD3_k127_2971148_4 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000008604 165.0
SYD3_k127_2971148_5 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000008493 133.0
SYD3_k127_2971148_6 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000005608 104.0
SYD3_k127_2971148_7 Rieske-like [2Fe-2S] domain - - - 0.000000000000169 74.0
SYD3_k127_2971148_8 Copper binding proteins, plastocyanin/azurin family - - - 0.000008339 49.0
SYD3_k127_2971148_9 Multicopper oxidase K00368 - 1.7.2.1 0.0008007 44.0
SYD3_k127_2971938_0 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 397.0
SYD3_k127_2971938_1 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003549 321.0
SYD3_k127_2971938_2 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003203 286.0
SYD3_k127_2971938_3 Biotin protein ligase C terminal domain K03524 - 6.3.4.15 0.000000000000000000000000000000000000000009088 165.0
SYD3_k127_2971938_4 Metal-sensitive transcriptional repressor K21600 - - 0.0000000000000000000000000000002704 126.0
SYD3_k127_2971938_5 P-type ATPase K17686 - 3.6.3.54 0.00000000000000002034 85.0
SYD3_k127_2971938_6 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K07025 - - 0.0000000000000003017 88.0
SYD3_k127_2971938_7 PFAM Polyketide cyclase dehydrase and lipid transport - - - 0.0000000000000005189 86.0
SYD3_k127_2971938_8 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 GO:0003674,GO:0005215 - 0.00004166 50.0
SYD3_k127_2977788_0 Aminotransferase class I and II K10206 GO:0003674,GO:0003824,GO:0008483,GO:0016740,GO:0016769 2.6.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 557.0
SYD3_k127_2977788_1 FAD dependent oxidoreductase K00109,K15736 - 1.1.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 477.0
SYD3_k127_2977788_10 Protein of unknown function (DUF1003) - - - 0.0000000000000000000000000000009727 130.0
SYD3_k127_2977788_2 Putative nucleotide-binding of sugar-metabolising enzyme K22129 - 2.7.1.219,2.7.1.220 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006008 366.0
SYD3_k127_2977788_3 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 364.0
SYD3_k127_2977788_4 Rieske 2Fe-2S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008969 347.0
SYD3_k127_2977788_5 PFAM Alpha beta hydrolase fold-3 domain protein K01066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 316.0
SYD3_k127_2977788_6 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000003877 222.0
SYD3_k127_2977788_7 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000001039 164.0
SYD3_k127_2977788_8 - - - - 0.0000000000000000000000000000000000000003242 160.0
SYD3_k127_2977788_9 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000000003418 160.0
SYD3_k127_3011962_0 PFAM ketose-bisphosphate aldolase, class-II K01624 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000002244 250.0
SYD3_k127_3011962_1 haloacid dehalogenase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000001918 236.0
SYD3_k127_3011962_2 signal peptide processing K13280 - 3.4.21.89 0.000000000000000000000000000000000000000000000000002827 196.0
SYD3_k127_3011962_3 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.000000000000000000000000000000000001886 148.0
SYD3_k127_3011962_4 Nitroreductase family - - - 0.000000000000000000000000006232 121.0
SYD3_k127_3011962_5 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000001015 117.0
SYD3_k127_3011962_6 Cupin 2, conserved barrel domain protein - - - 0.000000000000003831 81.0
SYD3_k127_3011962_7 - - - - 0.0000000000004611 78.0
SYD3_k127_3011962_8 FecR protein - - - 0.000005255 59.0
SYD3_k127_3048606_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.0 1479.0
SYD3_k127_3048606_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 467.0
SYD3_k127_3048606_10 DNA alkylation repair enzyme - - - 0.00000001926 67.0
SYD3_k127_3048606_11 Nucleotidyltransferase domain - - - 0.00000002558 61.0
SYD3_k127_3048606_12 HEPN domain - - - 0.000001046 53.0
SYD3_k127_3048606_13 Acetyltransferase (GNAT) family - - - 0.00001034 56.0
SYD3_k127_3048606_14 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K02405 - - 0.0000139 52.0
SYD3_k127_3048606_2 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 408.0
SYD3_k127_3048606_3 amino acid binding K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 398.0
SYD3_k127_3048606_4 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.000000000000000000000000000000000000000000000000000000000000000000003096 243.0
SYD3_k127_3048606_5 Regulates the transcription of the pyrimidine nucleotide (pyr) operon in response to exogenous pyrimidines K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000001249 227.0
SYD3_k127_3048606_6 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B K02823 - - 0.0000000000000000000000000000000000000000000000001997 187.0
SYD3_k127_3048606_7 - - - - 0.000000000000000000000000000000000000000002401 166.0
SYD3_k127_3048606_8 nuclease activity - - - 0.000000000000001141 82.0
SYD3_k127_3048606_9 toxin-antitoxin pair type II binding - - - 0.000000001584 62.0
SYD3_k127_30550_0 FAD binding domain K20218 - - 1.314e-194 632.0
SYD3_k127_30550_1 Rieske 2Fe-2S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000409 366.0
SYD3_k127_30550_10 helix_turn_helix, Lux Regulon - - - 0.00001057 58.0
SYD3_k127_30550_2 MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007134 255.0
SYD3_k127_30550_3 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000002248 184.0
SYD3_k127_30550_4 Luciferase-like monooxygenase K17228 - 1.14.14.35 0.00000000000000000000000000000000000007379 154.0
SYD3_k127_30550_5 Methyltransferase domain K07003 - - 0.00000000000000000000000000005552 127.0
SYD3_k127_30550_6 Transglycosylase associated protein - - - 0.000000000000000000000003385 104.0
SYD3_k127_30550_7 AraC-like ligand binding domain - - - 0.00000000000000005939 89.0
SYD3_k127_30550_8 Protein of unknown function (DUF1232) - - - 0.000000000004869 70.0
SYD3_k127_30550_9 Periplasmic component of the Tol biopolymer transport system - - - 0.0000000003593 73.0
SYD3_k127_3055561_0 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003923 347.0
SYD3_k127_3055561_1 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001634 283.0
SYD3_k127_3055561_10 DEAD DEAH box helicase K03654 - 3.6.4.12 0.0000000000000000000000001899 108.0
SYD3_k127_3055561_11 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000001191 105.0
SYD3_k127_3055561_12 YjbR - - - 0.000000000000000000003681 98.0
SYD3_k127_3055561_13 Zn-ribbon protein possibly nucleic acid-binding K07164 - - 0.000000000000000000004425 102.0
SYD3_k127_3055561_14 Resolvase, N terminal domain K06400 - - 0.0000000000000000003348 103.0
SYD3_k127_3055561_15 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.00000000000001689 74.0
SYD3_k127_3055561_16 lactoylglutathione lyase activity - - - 0.0000003822 57.0
SYD3_k127_3055561_17 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 GO:0008150,GO:0040007 - 0.00002192 53.0
SYD3_k127_3055561_2 Acyl transferase domain K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003325 276.0
SYD3_k127_3055561_3 Glycosyl transferase family group 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000004579 252.0
SYD3_k127_3055561_4 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000002812 224.0
SYD3_k127_3055561_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.00000000000000000000000000000000000166 150.0
SYD3_k127_3055561_6 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000000000000000000001804 138.0
SYD3_k127_3055561_7 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000002845 132.0
SYD3_k127_3055561_8 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000004648 132.0
SYD3_k127_3055561_9 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.000000000000000000000000000054 126.0
SYD3_k127_3148738_0 FAD dependent oxidoreductase K13796 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008001 581.0
SYD3_k127_3148738_1 PFAM molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 413.0
SYD3_k127_3148738_10 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000001799 229.0
SYD3_k127_3148738_11 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000002696 215.0
SYD3_k127_3148738_12 metal-dependent enzyme of the double-stranded beta helix superfamily - - - 0.0000000000000000000000000000000000000000000000000000006423 199.0
SYD3_k127_3148738_13 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000001215 203.0
SYD3_k127_3148738_14 Major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000003717 209.0
SYD3_k127_3148738_15 Major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000007783 188.0
SYD3_k127_3148738_16 XanTHIne and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.000000000000000000000000000000000000000000002212 175.0
SYD3_k127_3148738_17 PFAM GCN5-related N-acetyltransferase K00619 - 2.3.1.1 0.0000000000000000000000000000000000000000001273 176.0
SYD3_k127_3148738_18 cellulose binding - - - 0.0000000000000000000000000000000000000000002614 173.0
SYD3_k127_3148738_19 Sugar-specific transcriptional regulator TrmB - - - 0.0000000000000000000000000000000000000000002729 163.0
SYD3_k127_3148738_2 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007166 408.0
SYD3_k127_3148738_20 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.00000000000000000000000000000000000000001161 164.0
SYD3_k127_3148738_21 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000000000006955 146.0
SYD3_k127_3148738_22 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.0000000000000000000000000000000000001831 156.0
SYD3_k127_3148738_23 Nitroreductase family - - - 0.0000000000000000000000000000000000174 145.0
SYD3_k127_3148738_24 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K13039 - 4.1.1.79 0.000000000000000000000000000000001052 137.0
SYD3_k127_3148738_25 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K06034 - 4.1.1.79 0.000000000000000000000000000000001341 136.0
SYD3_k127_3148738_26 lactoylglutathione lyase activity - - - 0.00000000000000000000000000003952 122.0
SYD3_k127_3148738_27 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.000000000000000000000000005095 128.0
SYD3_k127_3148738_28 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000009858 120.0
SYD3_k127_3148738_29 Luciferase-like monooxygenase - - - 0.00000000000000000003959 101.0
SYD3_k127_3148738_3 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007213 357.0
SYD3_k127_3148738_30 helix_turn_helix, Lux Regulon - - - 0.000000000003149 80.0
SYD3_k127_3148738_4 FMN-dependent dehydrogenase K00104 - 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 328.0
SYD3_k127_3148738_5 TIGRFAM CitB domain protein K13795 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007694 314.0
SYD3_k127_3148738_6 Protein of unknown function (DUF933) K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 304.0
SYD3_k127_3148738_7 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 295.0
SYD3_k127_3148738_8 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002118 273.0
SYD3_k127_3148738_9 PFAM ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000001248 252.0
SYD3_k127_3152438_0 Glycosyl transferases group 1 - - - 3.072e-278 892.0
SYD3_k127_3152438_1 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 644.0
SYD3_k127_3152438_10 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003867 277.0
SYD3_k127_3152438_11 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008249 286.0
SYD3_k127_3152438_12 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001866 254.0
SYD3_k127_3152438_13 polysaccharide catabolic process K03478 - 3.5.1.105 0.0000000000000000000000000000000000000000000000000000000004465 219.0
SYD3_k127_3152438_14 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000003036 211.0
SYD3_k127_3152438_15 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000007613 191.0
SYD3_k127_3152438_16 Enoyl-CoA hydratase carnithine racemase - - - 0.00000000000000000000000000000000000000000000000001276 190.0
SYD3_k127_3152438_17 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.00000000000000000000000000000000000000000001382 172.0
SYD3_k127_3152438_18 homoserine kinase activity - - - 0.00000000000000000000000000000000000000005337 165.0
SYD3_k127_3152438_19 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000001406 165.0
SYD3_k127_3152438_2 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007128 392.0
SYD3_k127_3152438_20 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000004442 146.0
SYD3_k127_3152438_21 extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000001244 149.0
SYD3_k127_3152438_22 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000006494 134.0
SYD3_k127_3152438_23 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000002725 130.0
SYD3_k127_3152438_24 Methyltransferase domain - - - 0.0000000000000000000004338 109.0
SYD3_k127_3152438_25 PFAM Glycosyl transferases group 1 K20444 - - 0.000000000000000000006969 108.0
SYD3_k127_3152438_26 Glycosyltransferase like family 2 - - - 0.000000000000000000113 104.0
SYD3_k127_3152438_27 helix_turn_helix isocitrate lyase regulation - - - 0.00000000000000004718 91.0
SYD3_k127_3152438_28 TIGRFAM amino acid adenylation domain - - - 0.0000000000000004889 91.0
SYD3_k127_3152438_29 Transcriptional regulator - - - 0.000000000004849 70.0
SYD3_k127_3152438_3 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007565 387.0
SYD3_k127_3152438_30 ubiE/COQ5 methyltransferase family - - - 0.0000001499 63.0
SYD3_k127_3152438_31 O-methyltransferase activity - - - 0.000001427 60.0
SYD3_k127_3152438_32 membrane protein (DUF2078) K08982 - - 0.00001217 53.0
SYD3_k127_3152438_4 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008622 316.0
SYD3_k127_3152438_5 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008107 314.0
SYD3_k127_3152438_6 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 299.0
SYD3_k127_3152438_7 CoA-transferase family III K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005463 298.0
SYD3_k127_3152438_8 short-chain dehydrogenase reductase SDR K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003885 277.0
SYD3_k127_3152438_9 Glucose inhibited division protein A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003785 281.0
SYD3_k127_3176664_0 Animal haem peroxidase - - - 1.813e-282 900.0
SYD3_k127_3176664_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 520.0
SYD3_k127_3176664_10 transcriptional regulator K02624 - - 0.000000000000001257 86.0
SYD3_k127_3176664_11 PFAM Xylose isomerase domain-containing protein TIM barrel - - - 0.00000000000002303 83.0
SYD3_k127_3176664_12 Allergen V5 Tpx-1 family protein K06182,K08372,K12065,K12685,K16785,K16786,K16787 - 5.4.99.21 0.00000125 59.0
SYD3_k127_3176664_13 domain, Protein - - - 0.000004082 56.0
SYD3_k127_3176664_14 Cysteine-rich motif following a subset of SET domains K07117 - - 0.000004944 54.0
SYD3_k127_3176664_2 Aldo/keto reductase family K06221 - 1.1.1.346 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 347.0
SYD3_k127_3176664_3 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004632 303.0
SYD3_k127_3176664_4 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000002228 225.0
SYD3_k127_3176664_5 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781 - 5.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000005613 233.0
SYD3_k127_3176664_6 Rieske [2Fe-2S] domain K19982 - - 0.0000000000000000000000000000000000000000000000000007741 200.0
SYD3_k127_3176664_7 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.000000000000000000000000000000000000000008411 157.0
SYD3_k127_3176664_8 Luciferase-like monooxygenase K17228 - 1.14.14.35 0.000000000000000000000000000000000000101 154.0
SYD3_k127_3176664_9 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000001857 116.0
SYD3_k127_3194347_0 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 518.0
SYD3_k127_3194347_1 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004555 297.0
SYD3_k127_3194347_2 glyoxalase III activity - - - 0.00000000000000000000000000000000000000008509 160.0
SYD3_k127_3204398_0 Heat shock 70 kDa protein K04043 - - 2.841e-293 910.0
SYD3_k127_3204398_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 1.287e-248 788.0
SYD3_k127_3204398_10 High-affinity nickel-transport protein K08970 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001249 282.0
SYD3_k127_3204398_11 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000827 252.0
SYD3_k127_3204398_12 2-keto-4-pentenoate hydratase K01617 - 4.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000008269 234.0
SYD3_k127_3204398_13 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000001443 230.0
SYD3_k127_3204398_14 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000009297 224.0
SYD3_k127_3204398_15 Formyl transferase - - - 0.000000000000000000000000000000000000000000000000000000003997 211.0
SYD3_k127_3204398_16 PHP-associated - - - 0.0000000000000000000000000000000000000000000000002389 184.0
SYD3_k127_3204398_17 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000007299 172.0
SYD3_k127_3204398_18 - - - - 0.000000000000000000000000000000000000000000301 165.0
SYD3_k127_3204398_19 PFAM Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000000000000000000000000000000000000000009993 168.0
SYD3_k127_3204398_2 UvrD/REP helicase N-terminal domain K03657 - 3.6.4.12 1.035e-220 707.0
SYD3_k127_3204398_20 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000005935 152.0
SYD3_k127_3204398_21 Double zinc ribbon - - - 0.00000000000000000000000000000002999 142.0
SYD3_k127_3204398_22 Tetratricopeptide repeat - - - 0.0000000000000000000000000000001614 130.0
SYD3_k127_3204398_23 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000525 124.0
SYD3_k127_3204398_24 carboxymuconolactone decarboxylase - - - 0.000000000000000000000000003025 124.0
SYD3_k127_3204398_25 PFAM zinc finger, SWIM domain protein - - - 0.00000000000000000000000003246 110.0
SYD3_k127_3204398_26 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000001792 114.0
SYD3_k127_3204398_27 carboxymuconolactone decarboxylase K01607 - 4.1.1.44 0.0000000000000000001249 101.0
SYD3_k127_3204398_28 PFAM Transglycosylase-associated protein - - - 0.000000000000000003782 87.0
SYD3_k127_3204398_29 COG0857 BioD-like N-terminal domain of phosphotransacetylase K06873 - - 0.000000000004129 77.0
SYD3_k127_3204398_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00647,K09458 - 2.3.1.179,2.3.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309 472.0
SYD3_k127_3204398_30 pfam yhs - - - 0.00000000106 62.0
SYD3_k127_3204398_31 - - - - 0.0000001918 55.0
SYD3_k127_3204398_32 SnoaL-like domain - - - 0.000002015 55.0
SYD3_k127_3204398_33 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0005687 47.0
SYD3_k127_3204398_4 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007174 404.0
SYD3_k127_3204398_5 FAD binding domain K00480 - 1.14.13.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 364.0
SYD3_k127_3204398_6 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007134 344.0
SYD3_k127_3204398_7 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 341.0
SYD3_k127_3204398_8 Mur ligase family, glutamate ligase domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004288 307.0
SYD3_k127_3204398_9 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002168 276.0
SYD3_k127_3222685_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 6.734e-204 662.0
SYD3_k127_3222685_1 arginine biosynthetic process via ornithine K01755 - 4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000638 539.0
SYD3_k127_3222685_2 Belongs to the ribulose-phosphate 3-epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000001 245.0
SYD3_k127_3222685_3 - - - - 0.000000000000000000000000000000000001559 156.0
SYD3_k127_3222685_4 Protein of unknown function (DUF952) - - - 0.0000000000000000000125 96.0
SYD3_k127_3222685_5 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000005264 89.0
SYD3_k127_3255334_0 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004214 357.0
SYD3_k127_3255334_1 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006413 337.0
SYD3_k127_3255334_2 Group 1 family - - - 0.000000000000000000000000000000000000000000000000005322 200.0
SYD3_k127_3255334_3 PFAM TPR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000001169 191.0
SYD3_k127_3255334_4 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000005123 177.0
SYD3_k127_3255334_5 Peptidase C26 K07010 - - 0.000000000000000000000000000000000000000009757 162.0
SYD3_k127_3255334_6 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.000000000000000000001861 109.0
SYD3_k127_3255334_7 DNA methylase K00571 - 2.1.1.72 0.00000005841 56.0
SYD3_k127_3255334_8 Protein involved in DNA binding and DNA methylation - - - 0.00002329 52.0
SYD3_k127_3341250_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 6.981e-207 666.0
SYD3_k127_3341250_1 Pyridoxal-phosphate dependent enzyme K01883,K12339,K21148 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0032991,GO:0033847,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.113,2.5.1.47,6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 310.0
SYD3_k127_3341250_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004828,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006434,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0010467,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000001301 272.0
SYD3_k127_3341250_3 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000001635 195.0
SYD3_k127_3341250_4 thiolester hydrolase activity K06889 - - 0.00000000000000000000000000000000000003533 159.0
SYD3_k127_3341250_5 PFAM GCN5-related N-acetyltransferase K03824 - - 0.000000000000000000000000000000002727 142.0
SYD3_k127_3341250_6 NUDIX domain - - - 0.000000000000000000004608 98.0
SYD3_k127_3341250_7 Cupin 2, conserved barrel domain protein - - - 0.000000000000000004745 89.0
SYD3_k127_3341250_8 Protein of unknown function (DUF3105) - - - 0.0000000003126 70.0
SYD3_k127_3341250_9 - - - - 0.00000002256 63.0
SYD3_k127_3365208_0 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000006669 177.0
SYD3_k127_3365208_1 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.0000000001032 70.0
SYD3_k127_3365208_3 RDD family - - - 0.00007398 52.0
SYD3_k127_3383154_0 L-carnitine dehydratase bile acid-inducible protein F - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 339.0
SYD3_k127_3383154_1 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002093 281.0
SYD3_k127_3383154_2 L-carnitine dehydratase bile acid-inducible protein F - - - 0.000000000000000000000000000000000000000000000000000000000000000000001788 250.0
SYD3_k127_3383154_3 CoA-transferase family III - - - 0.000000000000000000000000000000000000000006547 168.0
SYD3_k127_3383154_4 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00009613 48.0
SYD3_k127_3422795_0 AMP-binding enzyme C-terminal domain K18661 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 593.0
SYD3_k127_3422795_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 392.0
SYD3_k127_3422795_10 cephalosporin hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000000002556 233.0
SYD3_k127_3422795_11 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000001042 178.0
SYD3_k127_3422795_12 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K13775 - - 0.0000000000000000000000000000000005042 143.0
SYD3_k127_3422795_13 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000008648 131.0
SYD3_k127_3422795_14 ABC transporter substrate-binding protein K02035 - - 0.00000000000000000000000000002176 136.0
SYD3_k127_3422795_15 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.00000000000000000000000000002962 124.0
SYD3_k127_3422795_16 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000001623 132.0
SYD3_k127_3422795_17 Peptidase M23 K21471 - - 0.00000000000000000004868 104.0
SYD3_k127_3422795_18 - - - - 0.00000000001245 66.0
SYD3_k127_3422795_2 acetyl-coa acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 394.0
SYD3_k127_3422795_3 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 340.0
SYD3_k127_3422795_4 MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000401 346.0
SYD3_k127_3422795_5 Daunorubicin resistance ABC transporter ATP-binding subunit K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009317 332.0
SYD3_k127_3422795_6 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000644 262.0
SYD3_k127_3422795_7 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005137 258.0
SYD3_k127_3422795_8 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000002001 235.0
SYD3_k127_3422795_9 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000004383 237.0
SYD3_k127_3587409_0 N-terminal domain of (some) glycogen debranching enzymes - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 565.0
SYD3_k127_3587409_1 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006007 519.0
SYD3_k127_3587409_10 UPF0056 membrane protein K05595 - - 0.0000000000000000001938 95.0
SYD3_k127_3587409_11 Immunoglobulin-like domain of bacterial spore germination - - - 0.000000000000001946 83.0
SYD3_k127_3587409_12 - - - - 0.0000004049 60.0
SYD3_k127_3587409_13 PFAM Rare lipoprotein A K20628 - - 0.0002462 50.0
SYD3_k127_3587409_2 bifunctional deaminase-reductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009141 337.0
SYD3_k127_3587409_3 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009453 340.0
SYD3_k127_3587409_4 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000929 297.0
SYD3_k127_3587409_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 295.0
SYD3_k127_3587409_6 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001449 275.0
SYD3_k127_3587409_7 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000002928 166.0
SYD3_k127_3587409_8 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000002298 141.0
SYD3_k127_3587409_9 Ami_3 K01448 - 3.5.1.28 0.000000000000000000008523 102.0
SYD3_k127_3622491_0 Catalyzes the synthesis of activated sulfate K00958 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 536.0
SYD3_k127_3622491_1 Belongs to the PAPS reductase family. CysH subfamily K00390,K00860 GO:0003674,GO:0003824,GO:0004604,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016667,GO:0016671,GO:0044424,GO:0044464,GO:0055114 1.8.4.10,1.8.4.8,2.7.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008115 296.0
SYD3_k127_3622491_2 Catalyzes the synthesis of activated sulfate K00390,K00860,K00958,K13811 GO:0000096,GO:0000103,GO:0003674,GO:0003824,GO:0004020,GO:0004779,GO:0004781,GO:0006082,GO:0006520,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010134,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0019379,GO:0019419,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0055114,GO:0070566,GO:0071704,GO:1901564 1.8.4.10,1.8.4.8,2.7.1.25,2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003468 288.0
SYD3_k127_3622491_3 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009054 282.0
SYD3_k127_3622491_4 Na+/Pi-cotransporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001227 256.0
SYD3_k127_3622491_5 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000007249 77.0
SYD3_k127_3622491_6 Thermolysin metallopeptidase, alpha-helical domain - - - 0.000000005333 68.0
SYD3_k127_3652447_0 Two component transcriptional regulator, LuxR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006507 293.0
SYD3_k127_3652447_1 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000004615 175.0
SYD3_k127_3652447_2 3-mercaptopyruvate sulfurtransferase K01011,K21028 - 2.8.1.1,2.8.1.11,2.8.1.2 0.000000000000000000000000000000000000001783 156.0
SYD3_k127_3652447_3 Histidine kinase K01768,K03406,K11617 - 2.7.13.3,4.6.1.1 0.00000000000000000000000000000000463 138.0
SYD3_k127_3652447_4 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000009287 113.0
SYD3_k127_3652447_5 Rhodanese Homology Domain - - - 0.000000003929 57.0
SYD3_k127_3652447_6 PFAM CHRD domain containing protein - - - 0.00000001674 64.0
SYD3_k127_3673549_0 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 559.0
SYD3_k127_3673549_1 Acetyl-CoA acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005702 443.0
SYD3_k127_3673549_10 with the TIM-barrel fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009441 275.0
SYD3_k127_3673549_11 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007366 270.0
SYD3_k127_3673549_12 4,5-dihydroxyphthalate decarboxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000004058 236.0
SYD3_k127_3673549_13 von Willebrand factor type A domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000004493 237.0
SYD3_k127_3673549_14 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04099,K04101 - 1.13.11.57,1.13.11.8 0.00000000000000000000000000000000000000000000000000000000000002217 228.0
SYD3_k127_3673549_15 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000005335 196.0
SYD3_k127_3673549_16 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000005449 213.0
SYD3_k127_3673549_17 von Willebrand factor (vWF) type A domain K07114 - - 0.00000000000000000000000000000000000000000000000000001367 214.0
SYD3_k127_3673549_18 Haem-degrading - - - 0.0000000000000000000000000000000000000000000000002473 182.0
SYD3_k127_3673549_19 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000003128 190.0
SYD3_k127_3673549_2 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 415.0
SYD3_k127_3673549_20 PA domain K19701 - 3.4.11.10,3.4.11.6 0.0000000000000000000000000000000000000000000003695 185.0
SYD3_k127_3673549_21 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000002115 136.0
SYD3_k127_3673549_22 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.000000000000000000000000000004095 134.0
SYD3_k127_3673549_23 stress protein (general stress protein 26) - - - 0.00000000000000000000000000005206 128.0
SYD3_k127_3673549_24 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000005725 131.0
SYD3_k127_3673549_25 - - - - 0.000000000000007354 83.0
SYD3_k127_3673549_26 - - - - 0.000000000329 73.0
SYD3_k127_3673549_27 PFAM Glyoxalase bleomycin resistance protein dioxygenase K08234 - - 0.000000001271 66.0
SYD3_k127_3673549_29 Bacterial regulatory proteins, tetR family - - - 0.0004352 49.0
SYD3_k127_3673549_3 Methionine synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000626 410.0
SYD3_k127_3673549_30 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K01185,K02395,K19223 - 3.2.1.17 0.0007342 50.0
SYD3_k127_3673549_4 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006641 390.0
SYD3_k127_3673549_5 Alcohol dehydrogenase GroES-like domain K00121 - 1.1.1.1,1.1.1.284 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 381.0
SYD3_k127_3673549_6 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 299.0
SYD3_k127_3673549_7 Alanine-glyoxylate amino-transferase K00375,K05825 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006084 301.0
SYD3_k127_3673549_8 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 290.0
SYD3_k127_3673549_9 Methionine synthase K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001247 291.0
SYD3_k127_3680709_0 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 626.0
SYD3_k127_3680709_1 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 295.0
SYD3_k127_3680709_2 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 292.0
SYD3_k127_3680709_3 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000003697 141.0
SYD3_k127_3680709_4 family 5 K02035,K15580 - - 0.00000000000000000000000000001167 136.0
SYD3_k127_3769026_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 283.0
SYD3_k127_3769026_1 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000006035 267.0
SYD3_k127_3769026_10 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.0000008977 53.0
SYD3_k127_3769026_11 Peptidase s1 and s6 chymotrypsin hap K08372 - - 0.0001648 50.0
SYD3_k127_3769026_2 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000000000000000000000007348 204.0
SYD3_k127_3769026_3 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000006027 183.0
SYD3_k127_3769026_4 Peptidoglycan-binding domain 1 protein - - - 0.000000000000000000000000000883 123.0
SYD3_k127_3769026_5 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000003986 111.0
SYD3_k127_3769026_6 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000002115 103.0
SYD3_k127_3769026_7 Bacterial protein of unknown function (DUF951) - - - 0.000000000000000009698 90.0
SYD3_k127_3769026_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110,K02124 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042802,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000002467 85.0
SYD3_k127_3769026_9 Multidrug efflux transporter - - - 0.00000000000001396 87.0
SYD3_k127_3785848_0 N-acyl-D-aspartate D-glutamate deacylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 616.0
SYD3_k127_3785848_1 PFAM amidohydrolase 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 293.0
SYD3_k127_3785848_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000008505 178.0
SYD3_k127_3785848_3 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000002178 123.0
SYD3_k127_3785848_4 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000006958 70.0
SYD3_k127_3785848_5 - - - - 0.000786 45.0
SYD3_k127_3964364_0 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead domain K03520 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 488.0
SYD3_k127_3964364_1 Nitrile hydratase, alpha chain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006357 274.0
SYD3_k127_3964364_2 Thioredoxin-like domain K05838 - - 0.00000000000000000000000000000000000000000000000000000000000000001431 233.0
SYD3_k127_3964364_3 LysM domain - - - 0.000000000000000000000000000000000000000000000000000000001606 208.0
SYD3_k127_3964364_4 Sugar-specific transcriptional regulator TrmB - - - 0.0000000000000000000000000000000000000000000002587 178.0
SYD3_k127_3964364_5 PFAM globin K06886 - - 0.00000000000000000000000000000000000000237 150.0
SYD3_k127_3964364_6 PFAM Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B - - - 0.000000000000000000000000000818 125.0
SYD3_k127_3964364_7 Nitrile hydratase beta subunit - - - 0.000000000000000000002044 98.0
SYD3_k127_3999910_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009963 577.0
SYD3_k127_3999910_1 Rieske [2Fe-2S] domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 473.0
SYD3_k127_3999910_2 Alpha/beta hydrolase family K05714 - 3.7.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008149 304.0
SYD3_k127_3999910_3 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000001586 237.0
SYD3_k127_3999910_4 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000000000000000000000000000000000001253 228.0
SYD3_k127_3999910_5 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000005804 198.0
SYD3_k127_3999910_6 bifunctional deaminase-reductase domain protein - - - 0.0000000000000000000000000000000000000000000000007166 178.0
SYD3_k127_3999910_8 Antibiotic biosynthesis monooxygenase - - - 0.000000006102 62.0
SYD3_k127_4005402_0 Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily K01911 - 6.2.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 514.0
SYD3_k127_4005402_1 Phosphotriesterase family K07048 - - 0.0000000000000000000000000000000000000000000000000000000000000001626 226.0
SYD3_k127_4005402_2 Ecdysteroid kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000004295 233.0
SYD3_k127_4005402_3 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) - - - 0.00000000000000000009727 93.0
SYD3_k127_401035_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 1.632e-268 850.0
SYD3_k127_401035_1 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 472.0
SYD3_k127_401035_2 Rieske [2Fe-2S] domain K15060 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 471.0
SYD3_k127_401035_3 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003771 275.0
SYD3_k127_401035_4 Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000004455 225.0
SYD3_k127_401035_5 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000000000000000000002561 214.0
SYD3_k127_401035_6 Alpha beta hydrolase - - - 0.0000000000000000000000000000000287 132.0
SYD3_k127_401035_7 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000001433 129.0
SYD3_k127_401035_8 Transcriptional regulator - - - 0.0000002191 62.0
SYD3_k127_4044546_0 Uncharacterized protein family (UPF0051) K09014 - - 2.838e-200 630.0
SYD3_k127_4044546_1 ABC transporter K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 326.0
SYD3_k127_4044546_2 Methyltransferase domain - - - 0.0000000000000000001387 100.0
SYD3_k127_4044546_3 transcriptional regulator - - - 0.000000000000000002923 94.0
SYD3_k127_4044546_4 SnoaL-like domain - - - 0.0000000000003948 75.0
SYD3_k127_4044546_5 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively K01243 - 3.2.2.9 0.000369 46.0
SYD3_k127_4068518_0 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 410.0
SYD3_k127_4068518_1 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 314.0
SYD3_k127_4068518_10 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000005393 115.0
SYD3_k127_4068518_11 Isocitrate lyase family K03417 - 4.1.3.30 0.0000000000000000000074 107.0
SYD3_k127_4068518_12 rieske 2fe-2s K05710 - - 0.000000000003531 72.0
SYD3_k127_4068518_13 2TM domain - - - 0.0001162 50.0
SYD3_k127_4068518_2 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000005901 248.0
SYD3_k127_4068518_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000003663 241.0
SYD3_k127_4068518_4 PFAM CoA-transferase family III K18702 - 2.8.3.19 0.00000000000000000000000000000000000000000000000000000000000000000001482 254.0
SYD3_k127_4068518_5 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000002588 198.0
SYD3_k127_4068518_6 DNA-binding transcription factor activity - - - 0.000000000000000000000000000000000000000000000002418 177.0
SYD3_k127_4068518_7 TIM-barrel fold metal-dependent hydrolase - - - 0.00000000000000000000000000000000000000000002821 176.0
SYD3_k127_4068518_8 Competence-damaged protein - - - 0.00000000000000000000000000000005685 135.0
SYD3_k127_4068518_9 Chromate resistance exported protein - - - 0.0000000000000000000000000001812 122.0
SYD3_k127_4090438_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 3.403e-216 675.0
SYD3_k127_4090438_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 579.0
SYD3_k127_4090438_10 Peptidoglycan-binding LysM - - - 0.000000000000000000000000000000000005739 153.0
SYD3_k127_4090438_11 Competence protein - - - 0.000000000000000000000000000001165 130.0
SYD3_k127_4090438_12 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000004081 122.0
SYD3_k127_4090438_13 Immunoglobulin-like domain of bacterial spore germination - - - 0.0000000000000000000000000007442 125.0
SYD3_k127_4090438_14 - - - - 0.00000000000000000000000001273 114.0
SYD3_k127_4090438_15 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000008689 80.0
SYD3_k127_4090438_16 Luciferase-like monooxygenase - - - 0.0000000000008283 71.0
SYD3_k127_4090438_17 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000000007226 61.0
SYD3_k127_4090438_2 Rieske 2Fe-2S - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 492.0
SYD3_k127_4090438_3 D12 class N6 adenine-specific DNA methyltransferase K06223 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 359.0
SYD3_k127_4090438_4 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 307.0
SYD3_k127_4090438_5 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002029 271.0
SYD3_k127_4090438_6 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000001473 245.0
SYD3_k127_4090438_7 GTP binding - - - 0.0000000000000000000000000000000000000000000000000000000000002061 234.0
SYD3_k127_4090438_8 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000000002969 207.0
SYD3_k127_4090438_9 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000007097 199.0
SYD3_k127_4096150_0 Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily K01911 - 6.2.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 565.0
SYD3_k127_4096150_1 Rieske 2Fe-2S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008423 488.0
SYD3_k127_4096150_10 Selenoprotein B, glycine betaine sarcosine D-proline reductase family K10672 - 1.21.4.2 0.000000000000000000006408 94.0
SYD3_k127_4096150_11 Catalyzes the oxidation of methyl-H(4)MPT to methylene- H(4)MPT K00320 - 1.5.98.2 0.000000000000002935 87.0
SYD3_k127_4096150_12 Aldehyde oxidase and xanthine dehydrogenase - - - 0.000000000000004083 76.0
SYD3_k127_4096150_13 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) K01661 - 4.1.3.36 0.0000000008662 59.0
SYD3_k127_4096150_2 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004943 346.0
SYD3_k127_4096150_3 Glycine reductase complex component B subunit gamma K10672 - 1.21.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004378 335.0
SYD3_k127_4096150_4 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 314.0
SYD3_k127_4096150_5 carboxylic acid catabolic process K02549 GO:0008150,GO:0040007 4.2.1.113 0.0000000000000000000000000000000000000000000000000000001085 211.0
SYD3_k127_4096150_6 Glycine sarcosine betaine reductase K10671 - 1.21.4.2 0.00000000000000000000000000000000000000000000000000000329 207.0
SYD3_k127_4096150_7 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000000000000656 177.0
SYD3_k127_4096150_8 triphosphatase activity K18446 - 3.6.1.25 0.000000000000000000000000000000000002487 148.0
SYD3_k127_4096150_9 Amidohydrolase - - - 0.00000000000000000000000000000000002885 145.0
SYD3_k127_411565_0 PFAM 4-hydroxyphenylacetate 3-hydroxylase K00483 - 1.14.14.9 9.889e-251 784.0
SYD3_k127_411565_1 PFAM ABC transporter transmembrane region K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005895 544.0
SYD3_k127_411565_10 CpXC protein - - - 0.00000000000000008369 94.0
SYD3_k127_411565_11 amine dehydrogenase activity - - - 0.000000000002873 79.0
SYD3_k127_411565_2 ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007089 505.0
SYD3_k127_411565_3 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 352.0
SYD3_k127_411565_4 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004698 311.0
SYD3_k127_411565_5 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000001 248.0
SYD3_k127_411565_6 WD40-like Beta Propeller Repeat K03641 - - 0.00000000000000000000000000000000000000000000001502 190.0
SYD3_k127_411565_7 extracellular solute-binding protein, family 5 K02035 - - 0.0000000000000000000000000000003145 141.0
SYD3_k127_411565_8 Protein of unknown function (DUF2283) - - - 0.0000000000000000000000000001485 115.0
SYD3_k127_411565_9 - - - - 0.00000000000000000000001102 104.0
SYD3_k127_4116865_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 1.578e-217 687.0
SYD3_k127_4116865_1 Carbohydrate phosphorylase K00688 - 2.4.1.1 2.113e-195 627.0
SYD3_k127_4116865_10 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000000002065 181.0
SYD3_k127_4116865_11 nUDIX hydrolase K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000544 183.0
SYD3_k127_4116865_12 -acetyltransferase - - - 0.000000000000000000000000000000000000000006303 158.0
SYD3_k127_4116865_13 transcriptional regulator K10914 GO:0000166,GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010675,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030312,GO:0030551,GO:0030552,GO:0030554,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043565,GO:0044212,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0062012,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000874,GO:2001141 - 0.0000000000000000000000000000000000000007505 157.0
SYD3_k127_4116865_14 family 5 K15580 - - 0.000000000000000000000000000000001803 148.0
SYD3_k127_4116865_15 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000004132 144.0
SYD3_k127_4116865_16 4 iron, 4 sulfur cluster binding - - - 0.00000000000000000000000000001132 120.0
SYD3_k127_4116865_17 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000002551 113.0
SYD3_k127_4116865_18 ECF sigma factor - - - 0.000000000000000000000001028 121.0
SYD3_k127_4116865_19 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000001526 120.0
SYD3_k127_4116865_2 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 570.0
SYD3_k127_4116865_20 Protein of unknown function (DUF402) K09145 - - 0.000000000000000000000008754 112.0
SYD3_k127_4116865_21 COG2133 Glucose sorbosone dehydrogenases - - - 0.000000000000000000002919 107.0
SYD3_k127_4116865_22 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000004057 103.0
SYD3_k127_4116865_23 PIN domain - - - 0.0000000000002171 76.0
SYD3_k127_4116865_24 Cold shock K03704 - - 0.000000000001048 76.0
SYD3_k127_4116865_25 Transcriptional regulatory protein, C terminal - - - 0.000000006076 65.0
SYD3_k127_4116865_26 Yip1 domain - - - 0.0000006028 59.0
SYD3_k127_4116865_27 Tetratricopeptide repeat - - - 0.00002216 53.0
SYD3_k127_4116865_3 Citrate synthase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 448.0
SYD3_k127_4116865_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 413.0
SYD3_k127_4116865_5 PHP domain K04477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004126 404.0
SYD3_k127_4116865_6 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004886 397.0
SYD3_k127_4116865_7 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 293.0
SYD3_k127_4116865_8 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001207 271.0
SYD3_k127_4116865_9 cyclic-guanylate-specific phosphodiesterase activity K21023 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000006672 241.0
SYD3_k127_4136603_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 2.493e-268 845.0
SYD3_k127_4136603_1 ABC transporter, transmembrane region K06147,K18890 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008332 595.0
SYD3_k127_4136603_10 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K03518,K13483 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000002716 229.0
SYD3_k127_4136603_11 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000118 199.0
SYD3_k127_4136603_12 Siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.000000000000000000000000000000000000001561 163.0
SYD3_k127_4136603_13 diguanylate cyclase - - - 0.000000000000000000000000000000000000003521 164.0
SYD3_k127_4136603_14 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000001973 141.0
SYD3_k127_4136603_15 NUDIX domain - - - 0.000000000000000000000000000000000002928 145.0
SYD3_k127_4136603_16 cyclic-guanylate-specific phosphodiesterase activity K21023 - 2.7.7.65 0.00000000000000000000000000000002713 143.0
SYD3_k127_4136603_17 Probable zinc-ribbon domain - - - 0.00000000000000000000000000002133 132.0
SYD3_k127_4136603_18 PFAM peptidase S16 lon domain protein K07157 - - 0.00000000000000000000000000006855 125.0
SYD3_k127_4136603_19 4Fe-4S dicluster domain K00338 - 1.6.5.3 0.000000000000000000000003687 109.0
SYD3_k127_4136603_2 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005003 484.0
SYD3_k127_4136603_20 Ferric uptake regulator family K03711 - - 0.000000000000000000000008988 106.0
SYD3_k127_4136603_21 chaperone-mediated protein complex assembly K00373,K17052 GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016530,GO:0022607,GO:0034622,GO:0042126,GO:0042128,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0051131,GO:0065003,GO:0071704,GO:0071840,GO:0071941,GO:0140104,GO:2001057 - 0.0000000000000000000002922 103.0
SYD3_k127_4136603_22 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07669,K07672 - - 0.0000000000000000000669 95.0
SYD3_k127_4136603_23 Belongs to the universal stress protein A family - - - 0.000000000000003614 83.0
SYD3_k127_4136603_24 COG1977 Molybdopterin converting factor, small subunit K03636 - - 0.000000001032 64.0
SYD3_k127_4136603_25 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000002415 60.0
SYD3_k127_4136603_26 Tetratricopeptide TPR_2 repeat protein - - - 0.00000004502 66.0
SYD3_k127_4136603_3 Tetrapyrrole (Corrin/Porphyrin) Methylases K01719,K01749,K02303,K13542,K13543 GO:0003674,GO:0003824,GO:0004851,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008757,GO:0009058,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019354,GO:0019438,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.107,2.5.1.61,4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 466.0
SYD3_k127_4136603_4 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 290.0
SYD3_k127_4136603_5 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002426 283.0
SYD3_k127_4136603_6 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005498 273.0
SYD3_k127_4136603_7 Transcriptional regulatory protein, C terminal K07667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006834 265.0
SYD3_k127_4136603_8 TIGRFAM formate dehydrogenase, alpha subunit K00336,K05299 - 1.17.1.10,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000002171 278.0
SYD3_k127_4136603_9 Belongs to the bacterial solute-binding protein 9 family K02077,K09818,K11601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004878 254.0
SYD3_k127_4162098_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.546e-204 658.0
SYD3_k127_4162098_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 585.0
SYD3_k127_4162098_10 Methionine synthase K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009871 319.0
SYD3_k127_4162098_11 TIGRFAM metallophosphoesterase, MG_246 BB_0505 family K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000168 288.0
SYD3_k127_4162098_12 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000406 309.0
SYD3_k127_4162098_13 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000001278 267.0
SYD3_k127_4162098_14 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001167 265.0
SYD3_k127_4162098_15 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000001158 263.0
SYD3_k127_4162098_16 aminoglycoside hydroxyurea antibiotic resistance kinase K04343 - 2.7.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000001293 254.0
SYD3_k127_4162098_17 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000147 256.0
SYD3_k127_4162098_18 hydrolase activity, acting on ester bonds K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000000001691 242.0
SYD3_k127_4162098_19 PFAM DGPFAETKE family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001499 233.0
SYD3_k127_4162098_2 Domain of unknown function (DUF3552) K18682 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 543.0
SYD3_k127_4162098_20 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000155 227.0
SYD3_k127_4162098_21 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000001377 218.0
SYD3_k127_4162098_22 PFAM LemA K03744 - - 0.00000000000000000000000000000000000000000000000000000001608 205.0
SYD3_k127_4162098_23 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.000000000000000000000000000000000000000000000000004083 194.0
SYD3_k127_4162098_24 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000001084 186.0
SYD3_k127_4162098_25 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.000000000000000000000000000000000000004082 151.0
SYD3_k127_4162098_26 PFAM ROK family protein K00845 - 2.7.1.2 0.0000000000000000000000000000000000003374 146.0
SYD3_k127_4162098_27 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000004179 145.0
SYD3_k127_4162098_29 Endoribonuclease L-PSP - - - 0.00000000000000000000000001222 113.0
SYD3_k127_4162098_3 alcohol dehydrogenase (NAD) activity K00001,K00121,K02267,K13980,K18857 GO:0000302,GO:0001101,GO:0001666,GO:0003674,GO:0003824,GO:0004022,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0006970,GO:0006979,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009410,GO:0009413,GO:0009414,GO:0009415,GO:0009628,GO:0009636,GO:0009651,GO:0009719,GO:0009725,GO:0009737,GO:0009743,GO:0009744,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0014070,GO:0014074,GO:0016020,GO:0016491,GO:0016614,GO:0016616,GO:0031000,GO:0032355,GO:0033993,GO:0034285,GO:0036270,GO:0036293,GO:0042221,GO:0042493,GO:0042542,GO:0042802,GO:0042803,GO:0043279,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046686,GO:0046983,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0055114,GO:0065007,GO:0070482,GO:0071944,GO:0080134,GO:0080135,GO:0097305,GO:1900037,GO:1900039,GO:1901698,GO:1901700 1.1.1.1,1.1.1.284 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009034 426.0
SYD3_k127_4162098_30 Type IV pilus biogenesis stability protein PilW - - - 0.00000000000000000123 94.0
SYD3_k127_4162098_4 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000651 413.0
SYD3_k127_4162098_5 PFAM Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002569 384.0
SYD3_k127_4162098_6 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 364.0
SYD3_k127_4162098_7 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 357.0
SYD3_k127_4162098_8 Involved in the biosynthesis of porphyrin-containing compound - GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 329.0
SYD3_k127_4162098_9 PFAM Rieske 2Fe-2S domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 327.0
SYD3_k127_4204232_0 aminopeptidase K01256 - 3.4.11.2 1.986e-203 662.0
SYD3_k127_4204232_1 Rieske [2Fe-2S] domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004803 445.0
SYD3_k127_4204232_10 PFAM flavin reductase domain protein FMN-binding - - - 0.00000000000000000000000000000211 133.0
SYD3_k127_4204232_12 Aspartyl protease - - - 0.00000000000000004277 86.0
SYD3_k127_4204232_13 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000001424 73.0
SYD3_k127_4204232_14 PFAM blue (type 1) copper domain protein - - - 0.00000000000005115 79.0
SYD3_k127_4204232_15 - - - - 0.0000000001675 69.0
SYD3_k127_4204232_2 antibiotic catabolic process K18235 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000981 426.0
SYD3_k127_4204232_3 FIST C domain - GO:0008150,GO:0040007 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 381.0
SYD3_k127_4204232_4 Glucose inhibited division protein A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008847 329.0
SYD3_k127_4204232_5 Mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000000000000000000000004197 195.0
SYD3_k127_4204232_6 phosphoribosyl-AMP cyclohydrolase activity K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000001855 154.0
SYD3_k127_4204232_7 PFAM pyridoxamine 5'-phosphate oxidase-related - - - 0.0000000000000000000000000000000000005111 145.0
SYD3_k127_4204232_8 HNH nucleases - - - 0.0000000000000000000000000000000000007421 145.0
SYD3_k127_4204232_9 Belongs to the CinA family K03742 - 3.5.1.42 0.000000000000000000000000000000002594 136.0
SYD3_k127_4223345_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 1.124e-236 747.0
SYD3_k127_4223345_1 drug exporters of the RND superfamily K06994 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000497 600.0
SYD3_k127_4223345_10 PFAM regulatory protein, MarR - - - 0.0000000000000000000000000002018 121.0
SYD3_k127_4223345_11 PFAM FAD linked oxidase domain protein K11472 - - 0.0000000000000000000000000002839 121.0
SYD3_k127_4223345_12 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000004557 102.0
SYD3_k127_4223345_13 Lrp/AsnC ligand binding domain - - - 0.0000000004272 63.0
SYD3_k127_4223345_14 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000001221 61.0
SYD3_k127_4223345_15 LytR cell envelope-related transcriptional attenuator - - - 0.000004304 54.0
SYD3_k127_4223345_16 Cbs domain - - - 0.00005494 51.0
SYD3_k127_4223345_2 PFAM FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 537.0
SYD3_k127_4223345_3 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009471 466.0
SYD3_k127_4223345_4 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005336 447.0
SYD3_k127_4223345_5 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000001585 242.0
SYD3_k127_4223345_6 GDP-mannose 4,6 dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000002104 202.0
SYD3_k127_4223345_7 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000000000004283 171.0
SYD3_k127_4223345_8 - - - - 0.00000000000000000000000000000000000004362 147.0
SYD3_k127_4223345_9 voltage-gated chloride channel activity - - - 0.0000000000000000000000000000008402 130.0
SYD3_k127_4231165_0 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 3.62e-198 633.0
SYD3_k127_4231165_1 Rieske 2Fe-2S - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000376 548.0
SYD3_k127_4231165_11 Catalyzes the decarboxylation of oxaloacetate into pyruvate. Seems to play a role in maintaining cellular concentrations of bicarbonate and pyruvate K01003 - 4.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000001433 257.0
SYD3_k127_4231165_12 PFAM Molybdopterin dehydrogenase, FAD-binding K11178 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000003332 256.0
SYD3_k127_4231165_13 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000004626 239.0
SYD3_k127_4231165_14 Coenzyme A transferase K01029 - 2.8.3.5 0.000000000000000000000000000000000000000000000000000000000000000003383 233.0
SYD3_k127_4231165_15 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K00760,K04075,K15780 - 2.4.2.8,6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000006738 237.0
SYD3_k127_4231165_16 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000001244 226.0
SYD3_k127_4231165_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000311 219.0
SYD3_k127_4231165_18 Coenzyme A transferase K01028 - 2.8.3.5 0.000000000000000000000000000000000000000000000000000000000524 212.0
SYD3_k127_4231165_19 F420H(2)-dependent quinone reductase - - - 0.000000000000000000000000000000000000000000000000000001679 198.0
SYD3_k127_4231165_2 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K11177 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 465.0
SYD3_k127_4231165_20 Protein of unknown function (DUF520) K09767 - - 0.00000000000000000000000000000000000000000000000000008547 191.0
SYD3_k127_4231165_21 Cupin domain - - - 0.00000000000000000000000000000000000000000000000007793 183.0
SYD3_k127_4231165_22 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.0000000000000000000000000000000000000000000000006222 186.0
SYD3_k127_4231165_23 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000001581 188.0
SYD3_k127_4231165_24 [2Fe-2S] binding domain K13483 - - 0.000000000000000000000000000000000000000001066 161.0
SYD3_k127_4231165_25 iron-sulfur cluster assembly K07400,K13628 - - 0.0000000000000000000000000000000000000001998 158.0
SYD3_k127_4231165_26 Superoxide dismutase K00518 - 1.15.1.1 0.0000000000000000000000000000000000004638 146.0
SYD3_k127_4231165_27 Uncharacterised ArCR, COG2043 - - - 0.0000000000000000000000000000000001483 143.0
SYD3_k127_4231165_28 Transmembrane secretion effector - - - 0.0000000000000000000000000000000003175 147.0
SYD3_k127_4231165_29 response regulator K07782,K15852 - - 0.0000000000000000000000000000007573 130.0
SYD3_k127_4231165_3 COG0524 Sugar kinases, ribokinase family K00847 - 2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 422.0
SYD3_k127_4231165_30 MmgE/PrpD family - - - 0.000000000000000000000000000003301 136.0
SYD3_k127_4231165_31 Amidohydrolase K07045 - - 0.00000000000000000000000000002351 122.0
SYD3_k127_4231165_32 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000001954 114.0
SYD3_k127_4231165_33 - - - - 0.00000000000000000004906 101.0
SYD3_k127_4231165_34 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.00000000000001225 81.0
SYD3_k127_4231165_35 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.00000000001801 70.0
SYD3_k127_4231165_36 Septum formation initiator K13052 - - 0.0000002204 58.0
SYD3_k127_4231165_37 DinB superfamily - - - 0.000001126 57.0
SYD3_k127_4231165_4 Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000744 412.0
SYD3_k127_4231165_5 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 390.0
SYD3_k127_4231165_6 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 363.0
SYD3_k127_4231165_7 acetyltransferase - GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006721 303.0
SYD3_k127_4231165_8 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 288.0
SYD3_k127_4231165_9 PFAM Rieske 2Fe-2S domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001016 281.0
SYD3_k127_4243234_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 7.859e-293 910.0
SYD3_k127_4243234_1 Drug exporters of the RND superfamily K06994,K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 504.0
SYD3_k127_4243234_10 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.0000000000000000000000000000000000000005176 160.0
SYD3_k127_4243234_11 Belongs to the universal stress protein A family - - - 0.00000000000000000000000000000002545 137.0
SYD3_k127_4243234_12 Phosphopantetheine attachment site - - - 0.000000000000000001558 87.0
SYD3_k127_4243234_13 PFAM response regulator receiver K02483,K07658,K07668 - - 0.00000000000006932 77.0
SYD3_k127_4243234_14 Glycosyl transferases group 1 K08256 - 2.4.1.345 0.00000001662 67.0
SYD3_k127_4243234_2 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00162,K11381 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007991 464.0
SYD3_k127_4243234_3 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00161,K00162,K11381,K21416 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009825 439.0
SYD3_k127_4243234_4 S-acyltransferase activity K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002995 424.0
SYD3_k127_4243234_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 372.0
SYD3_k127_4243234_6 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004346 253.0
SYD3_k127_4243234_7 CAAX protease self-immunity - - - 0.0000000000000000000000000000000000000000000000000000000000000000005312 238.0
SYD3_k127_4243234_8 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000009732 207.0
SYD3_k127_4269245_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000004199 197.0
SYD3_k127_4269245_1 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000003498 139.0
SYD3_k127_4269245_2 Polysaccharide biosynthesis protein - - - 0.000000000000000000002153 109.0
SYD3_k127_4269245_3 ABC transporter, substrate-binding protein, family 5 K02035 - - 0.0000002237 62.0
SYD3_k127_4307662_0 Glycosyltransferase family 28 C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 293.0
SYD3_k127_4307662_1 - - - - 0.0000000000000000000000000000000000000000002721 164.0
SYD3_k127_4307662_2 Putative inner membrane exporter, YdcZ K09936 - - 0.000000003034 64.0
SYD3_k127_4307662_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0008164 48.0
SYD3_k127_4339024_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004467 407.0
SYD3_k127_4339024_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003859 406.0
SYD3_k127_4339024_10 phosphoribosylanthranilate isomerase activity K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000004919 178.0
SYD3_k127_4339024_11 signal peptide peptidase SppA, 36K type K04773 - - 0.00000000000000000000000000000000000000000006762 173.0
SYD3_k127_4339024_12 Lipocalin-like domain - - - 0.000000000000000000005786 99.0
SYD3_k127_4339024_13 Cell division protein FtsQ K03589 - - 0.0000000000000000003335 97.0
SYD3_k127_4339024_14 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.000000000612 63.0
SYD3_k127_4339024_2 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 397.0
SYD3_k127_4339024_3 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004549 380.0
SYD3_k127_4339024_4 D-ala D-ala ligase N-terminus K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 334.0
SYD3_k127_4339024_5 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0004048,GO:0004049,GO:0004425,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0016829,GO:0016830,GO:0016831,GO:0016833,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042401,GO:0042430,GO:0042435,GO:0042451,GO:0042455,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046129,GO:0046219,GO:0046390,GO:0046394,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901657,GO:1901659,GO:1902494 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000067 324.0
SYD3_k127_4339024_6 Acyl-CoA dehydrogenase, C-terminal domain K22027 - 1.14.13.235 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 322.0
SYD3_k127_4339024_7 Indole-3-glycerol phosphate synthase K01609 - 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000615 226.0
SYD3_k127_4339024_8 FR47-like protein - - - 0.00000000000000000000000000000000000000000000000000000000003089 211.0
SYD3_k127_4339024_9 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000007941 196.0
SYD3_k127_4356804_0 DNA-directed DNA polymerase K02337 - 2.7.7.7 0.0 1145.0
SYD3_k127_4356804_1 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004597 532.0
SYD3_k127_4356804_10 haloacid dehalogenase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000001862 267.0
SYD3_k127_4356804_11 Coenzyme A transferase K01028 - 2.8.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000003337 262.0
SYD3_k127_4356804_12 COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit K01029,K01035 - 2.8.3.5,2.8.3.8,2.8.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000001874 254.0
SYD3_k127_4356804_13 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000007397 207.0
SYD3_k127_4356804_14 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000003988 201.0
SYD3_k127_4356804_15 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000989 118.0
SYD3_k127_4356804_16 Copper resistance protein CopC K14166 - - 0.000000000000000000000000003328 129.0
SYD3_k127_4356804_17 - - - - 0.00000000000000000000000002886 117.0
SYD3_k127_4356804_18 PFAM nitrogen-fixing NifU domain protein - - - 0.0000000000000000005264 89.0
SYD3_k127_4356804_19 Cytochrome c - - - 0.00000000000000006103 96.0
SYD3_k127_4356804_2 acyl-CoA transferases carnitine dehydratase K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 434.0
SYD3_k127_4356804_20 PFAM copper resistance protein CopC K14166 - - 0.00000000009572 71.0
SYD3_k127_4356804_21 peptidase C60 sortase A and B - - - 0.0000004577 62.0
SYD3_k127_4356804_3 AMP-binding enzyme C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 434.0
SYD3_k127_4356804_4 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 425.0
SYD3_k127_4356804_5 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 356.0
SYD3_k127_4356804_6 Taurine catabolism dioxygenase TauD, TfdA family K03119 - 1.14.11.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 342.0
SYD3_k127_4356804_7 organic acid phosphorylation K00865 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 341.0
SYD3_k127_4356804_8 Multicopper oxidase K00368 - 1.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005628 323.0
SYD3_k127_4356804_9 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 314.0
SYD3_k127_4379561_0 aromatic amino acid beta-eliminating lyase threonine aldolase K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 441.0
SYD3_k127_4379561_1 ABC transporter transmembrane region K06147,K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 377.0
SYD3_k127_4379561_2 Rieske [2Fe-2S] domain K15060 - - 0.000000000000000000000000000000000000000000000000000000254 196.0
SYD3_k127_4379561_3 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000008073 175.0
SYD3_k127_4379561_4 EVE domain - - - 0.0000000000000000000000000000000000001482 147.0
SYD3_k127_4379561_5 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000005782 131.0
SYD3_k127_4379561_6 Zinc-binding dehydrogenase K00008 - 1.1.1.14 0.000000000000000000000000000000006428 140.0
SYD3_k127_4379561_7 glyoxalase III activity - - - 0.00000000000000000000000000007355 123.0
SYD3_k127_4379561_8 Protein of unknown function (DUF3105) - - - 0.000000006182 68.0
SYD3_k127_4419050_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 1.994e-258 817.0
SYD3_k127_4419050_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 2.659e-242 777.0
SYD3_k127_4419050_10 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 310.0
SYD3_k127_4419050_11 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000007192 241.0
SYD3_k127_4419050_12 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000044 242.0
SYD3_k127_4419050_13 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000001374 234.0
SYD3_k127_4419050_14 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000000000000004968 197.0
SYD3_k127_4419050_15 Flavin containing amine oxidoreductase K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000141 146.0
SYD3_k127_4419050_16 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768,K12132 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016021,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0031224,GO:0031226,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.11.1,5.2.1.8 0.00000000000000000000000000000003565 136.0
SYD3_k127_4419050_17 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.00000000000000000000000000003043 127.0
SYD3_k127_4419050_18 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.000000000000000000000001817 109.0
SYD3_k127_4419050_19 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000002394 105.0
SYD3_k127_4419050_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 2.563e-210 669.0
SYD3_k127_4419050_20 Acylphosphatase K01512 - 3.6.1.7 0.000000000000000000004788 100.0
SYD3_k127_4419050_21 Protein of unknown function (DUF448) K07742 - - 0.00000000000000000007185 92.0
SYD3_k127_4419050_22 MarR family transcriptional regulator K15973 GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000002491 80.0
SYD3_k127_4419050_23 AsnC family - - - 0.0000000000002522 73.0
SYD3_k127_4419050_25 Rieske 2Fe-2S - - - 0.0006191 46.0
SYD3_k127_4419050_3 D-isomer specific 2-hydroxyacid dehydrogenase catalytic region K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 507.0
SYD3_k127_4419050_4 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016491,GO:0016651,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 433.0
SYD3_k127_4419050_5 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000314 424.0
SYD3_k127_4419050_6 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 381.0
SYD3_k127_4419050_7 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006142 377.0
SYD3_k127_4419050_8 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 376.0
SYD3_k127_4419050_9 PFAM Rieske 2Fe-2S domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 323.0
SYD3_k127_4475483_0 DEAD DEAH box helicase K03654 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004387 594.0
SYD3_k127_4475483_1 Acyl-CoA dehydrogenase, C-terminal domain K16047 - 1.14.14.12 0.0000000000000000000000000000000000000000000000000000000001003 219.0
SYD3_k127_4475483_2 Protein of unknown function (DUF3455) - - - 0.00000000000003887 72.0
SYD3_k127_4603033_0 Molybdopterin oxidoreductase - - - 5.126e-248 782.0
SYD3_k127_4603033_1 Peptidase family M3 K01392 - 3.4.24.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 616.0
SYD3_k127_4603033_2 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009842 604.0
SYD3_k127_4603033_3 NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00342,K05575 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009449 406.0
SYD3_k127_4603033_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 366.0
SYD3_k127_4603033_5 YjbR - - - 0.000000000000000000000000000000000000000003537 160.0
SYD3_k127_4603033_6 Molybdopterin-guanine dinucleotide biosynthesis protein B K03753 - - 0.00000000000000000000000000000003097 131.0
SYD3_k127_4603033_7 electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon- concentration K05576 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000003891 115.0
SYD3_k127_4603033_8 Belongs to the complex I subunit 6 family K00339,K05578 - 1.6.5.3 0.000000000000000000000006352 106.0
SYD3_k127_4603033_9 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000001103 105.0
SYD3_k127_4622771_0 Gamma-glutamyltranspeptidase K00681 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006082,GO:0006508,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0019538,GO:0019752,GO:0030288,GO:0030313,GO:0031975,GO:0034722,GO:0036374,GO:0042597,GO:0043094,GO:0043102,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070011,GO:0071704,GO:0097264,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.3.2.2,3.4.19.13 1.167e-212 673.0
SYD3_k127_4622771_1 Peptidase C1-like family K01372 - 3.4.22.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009864 580.0
SYD3_k127_4622771_2 Ribosomal protein L11 methyltransferase K02687 - - 0.00000000000000000000000000000000000000000000000000000000003898 217.0
SYD3_k127_4622771_3 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.0000000000000000000000000000000001137 136.0
SYD3_k127_4622771_4 AraC-like ligand binding domain - - - 0.0000000000000004847 87.0
SYD3_k127_4622771_5 Involved in the tonB-independent uptake of proteins K03641 - - 0.00005027 56.0
SYD3_k127_480185_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 3.555e-238 760.0
SYD3_k127_480185_1 R3H domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 601.0
SYD3_k127_480185_10 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000000000002406 197.0
SYD3_k127_480185_11 Scavenger mRNA decapping enzyme C-term binding - - - 0.0000000000000000000000000000000000009777 145.0
SYD3_k127_480185_12 TIGRFAM DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.000000000000000000000000000005246 134.0
SYD3_k127_480185_13 Domain of unknown function (DUF4389) - - - 0.000000000000000751 89.0
SYD3_k127_480185_14 Acetyltransferase (GNAT) domain - - - 0.00000000002399 69.0
SYD3_k127_480185_15 - - - - 0.00000004356 64.0
SYD3_k127_480185_16 DinB superfamily - - - 0.000007733 55.0
SYD3_k127_480185_17 Protein of unknown function (DUF2283) - - - 0.00007672 54.0
SYD3_k127_480185_18 NUDIX domain K03574 - 3.6.1.55 0.0002344 52.0
SYD3_k127_480185_2 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 - 4.3.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008496 450.0
SYD3_k127_480185_3 DNA recombination-mediator protein A K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 356.0
SYD3_k127_480185_4 Belongs to the ABC transporter superfamily K02031,K15583,K15587 - 3.6.3.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 343.0
SYD3_k127_480185_5 Peptidase C26 K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006917 271.0
SYD3_k127_480185_6 Phage integrase, N-terminal SAM-like domain K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001419 258.0
SYD3_k127_480185_7 acetylesterase activity K01046 - 3.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000008332 231.0
SYD3_k127_480185_8 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000002627 222.0
SYD3_k127_480185_9 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0008614,GO:0009058,GO:0009108,GO:0009110,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016829,GO:0016840,GO:0016843,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0040007,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0071496,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902494,GO:1903600 4.3.3.6 0.000000000000000000000000000000000000000000000000000000000000009772 220.0
SYD3_k127_4835775_0 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000727 485.0
SYD3_k127_4835775_1 Taurine catabolism dioxygenase TauD, TfdA family K06912 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 400.0
SYD3_k127_4835775_2 COG1062 Zn-dependent alcohol dehydrogenases, class III K00121 - 1.1.1.1,1.1.1.284 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005965 406.0
SYD3_k127_4835775_3 IclR helix-turn-helix domain - - - 0.00000000000000000009825 98.0
SYD3_k127_4835775_4 extracellular solute-binding protein, family 5 K02035 - - 0.0000000000000002633 92.0
SYD3_k127_4835775_5 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000004529 74.0
SYD3_k127_48652_0 Belongs to the DegT DnrJ EryC1 family - - - 8.801e-215 690.0
SYD3_k127_48652_1 COG2133 Glucose sorbosone dehydrogenases - - - 3.653e-204 702.0
SYD3_k127_48652_10 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000008053 151.0
SYD3_k127_48652_11 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000001212 155.0
SYD3_k127_48652_12 Transport permease protein K01992 - - 0.000000000000000000000001147 115.0
SYD3_k127_48652_13 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.0000000000000000000002003 99.0
SYD3_k127_48652_14 pilus organization K02674,K07004 - - 0.0000000000000000000004301 115.0
SYD3_k127_48652_15 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000002221 94.0
SYD3_k127_48652_16 Catalyzes the acetylation of dTDP-fucosamine (dTDP-4- amino-4,6-dideoxy-D-galactose) to dTDP-Fuc4NAc, which is utilized in the biosynthesis of the enterobacterial common antigen (ECA) K16704 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005976,GO:0008080,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009246,GO:0009987,GO:0016051,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044464,GO:0046378,GO:0071704,GO:1901135,GO:1901137,GO:1901576 2.3.1.210 0.0000000000000001396 90.0
SYD3_k127_48652_17 Uncharacterised nucleotidyltransferase - - - 0.000000000000001028 89.0
SYD3_k127_48652_18 HPr kinase - - - 0.00000000001645 75.0
SYD3_k127_48652_2 histidine kinase A domain protein domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008621 358.0
SYD3_k127_48652_20 Alpha/beta hydrolase family - - - 0.00000003619 60.0
SYD3_k127_48652_21 - - - - 0.00000005536 64.0
SYD3_k127_48652_22 Transglutaminase-like superfamily - - - 0.0002511 49.0
SYD3_k127_48652_3 PFAM SMP-30 Gluconolaconase LRE-like region K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000008904 257.0
SYD3_k127_48652_4 Belongs to the peptidase S8 family K14645 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004293 273.0
SYD3_k127_48652_5 Fibronectin type 3 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002354 254.0
SYD3_k127_48652_6 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000003038 217.0
SYD3_k127_48652_7 (ABC) transporter K19340 - - 0.0000000000000000000000000000000000000000000000000000004938 205.0
SYD3_k127_48652_8 PFAM luciferase-like - - - 0.00000000000000000000000000000000000000000000000008259 190.0
SYD3_k127_48652_9 Polysaccharide biosynthesis C-terminal domain - - - 0.00000000000000000000000000000000000000000009691 178.0
SYD3_k127_4873092_0 Acyl transferase domain - - - 0.0 2318.0
SYD3_k127_4873092_1 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009462 386.0
SYD3_k127_4873092_2 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000292 366.0
SYD3_k127_4873092_3 Sulfotransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004821 277.0
SYD3_k127_4873092_4 Esterase PHB depolymerase K03932 - - 0.000000000000000000000000000000000000000000000000002287 196.0
SYD3_k127_4873092_5 ABC-type transport system involved in multi-copper enzyme maturation permease component K01992 - - 0.00000000000000000000000000000000000000000001404 173.0
SYD3_k127_4873092_6 4'-phosphopantetheinyl transferase superfamily K00997,K06133 - 2.7.8.7 0.000000000000000000000000000000000000000000302 168.0
SYD3_k127_4873092_7 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000599 123.0
SYD3_k127_4959649_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 1.347e-298 934.0
SYD3_k127_4959649_1 Glycosyltransferase family 20 K00697 - 2.4.1.15,2.4.1.347 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 361.0
SYD3_k127_4959649_2 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008958 276.0
SYD3_k127_4969149_0 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 586.0
SYD3_k127_4969149_1 Cytochrome C and Quinol oxidase polypeptide I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000089 548.0
SYD3_k127_4969149_10 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000647 256.0
SYD3_k127_4969149_11 Domain present in PSD-95, Dlg, and ZO-1/2. K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007159 262.0
SYD3_k127_4969149_12 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000227 243.0
SYD3_k127_4969149_13 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000004102 219.0
SYD3_k127_4969149_14 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000008189 213.0
SYD3_k127_4969149_15 PFAM ATP-binding region, ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000005347 220.0
SYD3_k127_4969149_16 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000003345 203.0
SYD3_k127_4969149_17 PFAM cytochrome c oxidase, subunit III K02276,K02299 - 1.9.3.1 0.00000000000000000000000000000000000000000000000005452 183.0
SYD3_k127_4969149_18 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000007073 180.0
SYD3_k127_4969149_19 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.000000000000000000000000000000000000000002949 167.0
SYD3_k127_4969149_2 Rieske 2Fe-2S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 499.0
SYD3_k127_4969149_20 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000001408 157.0
SYD3_k127_4969149_21 Ferric reductase like transmembrane component - - - 0.0000000000000000000000001275 113.0
SYD3_k127_4969149_22 Domain of unknown function (DU1801) - - - 0.000000000000000002941 90.0
SYD3_k127_4969149_23 - K07234 - - 0.00000000001015 77.0
SYD3_k127_4969149_3 (belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family) K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 493.0
SYD3_k127_4969149_4 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 443.0
SYD3_k127_4969149_5 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 364.0
SYD3_k127_4969149_6 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 324.0
SYD3_k127_4969149_7 Belongs to the universal ribosomal protein uS2 family K02967 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007919 306.0
SYD3_k127_4969149_8 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 304.0
SYD3_k127_4969149_9 Prolyl oligopeptidase family K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002169 269.0
SYD3_k127_5012511_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002136 482.0
SYD3_k127_5012511_1 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 437.0
SYD3_k127_5012511_2 Zn-dependent proteases and their inactivated homologs K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007881 400.0
SYD3_k127_5012511_3 PFAM penicillin-binding protein transpeptidase K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 385.0
SYD3_k127_5012511_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 355.0
SYD3_k127_5012511_5 Fumarylacetoacetate (FAA) hydrolase family K02554 - 4.2.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000001156 260.0
SYD3_k127_5012511_6 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000002409 231.0
SYD3_k127_5012511_7 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000005091 136.0
SYD3_k127_5012511_8 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.000000000000000000000003535 115.0
SYD3_k127_5012511_9 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins - - - 0.000000003125 65.0
SYD3_k127_5032534_0 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000001676 236.0
SYD3_k127_5032534_1 CoA-binding domain K00996,K03606 - 2.7.8.6 0.000000000000000000000000000000000000000000000000000000008648 206.0
SYD3_k127_5032534_2 Oxidoreductase - - - 0.00000000000000000000000000000000000000000000000008259 190.0
SYD3_k127_5032534_3 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000001036 162.0
SYD3_k127_5032534_4 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000006754 109.0
SYD3_k127_5032534_5 - - - - 0.000000003963 68.0
SYD3_k127_5032534_6 N-terminal half of MaoC dehydratase - - - 0.000000007846 63.0
SYD3_k127_5032534_7 - - - - 0.00000001267 61.0
SYD3_k127_5032534_8 - - - - 0.00000003774 64.0
SYD3_k127_5086511_0 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006175 589.0
SYD3_k127_5086511_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005825 519.0
SYD3_k127_5086511_10 Fibronectin type 3 domain - - - 0.00000000000000000000000000000000002335 152.0
SYD3_k127_5086511_11 Molybdopterin converting factor, small subunit K03636 - - 0.00000000000000000000000000000004376 127.0
SYD3_k127_5086511_12 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000005625 126.0
SYD3_k127_5086511_13 Glutamine amidotransferase domain K01953 - 6.3.5.4 0.00000000000000000001546 107.0
SYD3_k127_5086511_14 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.000000000000001742 80.0
SYD3_k127_5086511_15 methionine transport K02071 - - 0.0000000000001077 73.0
SYD3_k127_5086511_16 Phosphotransferase enzyme family - - - 0.0000005611 61.0
SYD3_k127_5086511_17 Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)- (lauroyl)-lipid IV(A) K02517 - 2.3.1.241 0.000007657 57.0
SYD3_k127_5086511_18 sister chromatid segregation - - - 0.00001546 57.0
SYD3_k127_5086511_19 - - - - 0.00004024 51.0
SYD3_k127_5086511_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 383.0
SYD3_k127_5086511_20 Copper binding proteins, plastocyanin/azurin family - - - 0.0002251 51.0
SYD3_k127_5086511_3 amidohydrolase K03392 - 4.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004227 320.0
SYD3_k127_5086511_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001337 292.0
SYD3_k127_5086511_5 phospholipase C K01114 - 3.1.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003425 289.0
SYD3_k127_5086511_6 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007043 247.0
SYD3_k127_5086511_7 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001033 251.0
SYD3_k127_5086511_8 Amidohydrolase family K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000008006 237.0
SYD3_k127_5086511_9 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000000001592 204.0
SYD3_k127_5097507_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 3.711e-198 628.0
SYD3_k127_5097507_1 PFAM glycosyl transferase, family 51 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 462.0
SYD3_k127_5097507_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 GO:0003674,GO:0003824,GO:0003887,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004053 331.0
SYD3_k127_5097507_3 PFAM Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005797 246.0
SYD3_k127_5097507_4 Helix-turn-helix domain - - - 0.000000000000000000000000000001297 130.0
SYD3_k127_5097507_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000002863 105.0
SYD3_k127_5097507_6 Rieske 2Fe-2S K05710 - - 0.00000001642 58.0
SYD3_k127_5130171_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0034404,GO:0034641,GO:0034654,GO:0040007,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 1.276e-209 668.0
SYD3_k127_5130171_1 Belongs to the phosphoglycerate kinase family K00927,K01803 GO:0001871,GO:0002020,GO:0003674,GO:0003824,GO:0004618,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009893,GO:0009986,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0010755,GO:0010756,GO:0010954,GO:0016020,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019222,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0030162,GO:0030193,GO:0030195,GO:0030246,GO:0030247,GO:0030312,GO:0031323,GO:0031325,GO:0032101,GO:0032102,GO:0032268,GO:0032270,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0042866,GO:0043436,GO:0043532,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045862,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050818,GO:0050819,GO:0050878,GO:0051171,GO:0051173,GO:0051186,GO:0051188,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051917,GO:0051919,GO:0055086,GO:0060255,GO:0061041,GO:0061045,GO:0065007,GO:0065008,GO:0070613,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0080134,GO:0090407,GO:1900046,GO:1900047,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903034,GO:1903035,GO:1903317,GO:1903319,GO:2001065 2.7.2.3,5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 483.0
SYD3_k127_5130171_10 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000005753 92.0
SYD3_k127_5130171_11 Domain of unknown function (DUF4342) - - - 0.000000000000001889 79.0
SYD3_k127_5130171_12 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.000000006257 68.0
SYD3_k127_5130171_13 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00001443 53.0
SYD3_k127_5130171_14 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0008033 50.0
SYD3_k127_5130171_2 phosphoglycerate mutase K15635 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005841 432.0
SYD3_k127_5130171_3 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004862 408.0
SYD3_k127_5130171_4 4-phosphoerythronate dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009241 304.0
SYD3_k127_5130171_5 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000004218 239.0
SYD3_k127_5130171_6 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000001959 196.0
SYD3_k127_5130171_7 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000331 171.0
SYD3_k127_5130171_8 - - - - 0.0000000000000000000000000000000000000006592 153.0
SYD3_k127_5130171_9 lytic transglycosylase activity - - - 0.00000000000000000006806 103.0
SYD3_k127_5160375_0 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1231.0
SYD3_k127_5160375_1 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 2.875e-281 877.0
SYD3_k127_5160375_10 Belongs to the amidase family K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 329.0
SYD3_k127_5160375_11 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004375 319.0
SYD3_k127_5160375_12 protein related to plant photosystem II stability assembly factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 311.0
SYD3_k127_5160375_13 Methionine synthase K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 308.0
SYD3_k127_5160375_14 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008704 286.0
SYD3_k127_5160375_15 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001068 275.0
SYD3_k127_5160375_16 Xylose isomerase-like TIM barrel K01816,K22131 - 5.3.1.22,5.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000004109 269.0
SYD3_k127_5160375_17 CO dehydrogenase flavoprotein domain protein K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000003569 253.0
SYD3_k127_5160375_18 COGs COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS CutS homologs K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000003417 243.0
SYD3_k127_5160375_19 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001865 236.0
SYD3_k127_5160375_2 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 3.512e-273 861.0
SYD3_k127_5160375_20 Luciferase-like monooxygenase K00320 - 1.5.98.2 0.0000000000000000000000000000000000000000000000000000000000000002407 232.0
SYD3_k127_5160375_21 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000004205 194.0
SYD3_k127_5160375_22 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000001971 184.0
SYD3_k127_5160375_23 N-acetylmuramoyl-L-alanine amidase - - - 0.0000000000000000000000000000000000000000001982 178.0
SYD3_k127_5160375_24 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000002447 174.0
SYD3_k127_5160375_25 KR domain K13774 - - 0.000000000000000000000000000000000000000006358 164.0
SYD3_k127_5160375_26 acyl-CoA transferases carnitine dehydratase K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000871 166.0
SYD3_k127_5160375_27 ECF sigma factor K03088 - - 0.000000000000000000000000000000001078 141.0
SYD3_k127_5160375_28 protein conserved in bacteria - - - 0.00000000000000000000000000000001544 136.0
SYD3_k127_5160375_29 ABC transporter substrate-binding protein K02035 - - 0.000000000000000000000000000001273 139.0
SYD3_k127_5160375_3 carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 1.981e-209 664.0
SYD3_k127_5160375_30 Carbon monoxide dehydrogenase subunit G (CoxG) K09386 - - 0.00000000000000000000000000003076 123.0
SYD3_k127_5160375_31 RNA recognition motif - - - 0.00000000000000000000000000007992 119.0
SYD3_k127_5160375_32 PFAM class II aldolase adducin family protein - - - 0.00000000000000000000005316 108.0
SYD3_k127_5160375_33 Antibiotic biosynthesis monooxygenase K11530 - 5.3.1.32 0.000000000000000000001333 99.0
SYD3_k127_5160375_34 - - - - 0.00000000000000000001939 97.0
SYD3_k127_5160375_35 Xylose isomerase-like TIM barrel - - - 0.00000000000000002594 94.0
SYD3_k127_5160375_37 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity K03429 - 2.4.1.315 0.000000000001602 72.0
SYD3_k127_5160375_38 KR domain - - - 0.000000000002955 76.0
SYD3_k127_5160375_39 Bacterial regulatory helix-turn-helix proteins, AraC family K13529 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003824,GO:0003905,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008725,GO:0009987,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0030312,GO:0032131,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0035510,GO:0043170,GO:0043412,GO:0043733,GO:0043916,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051409,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 3.2.2.21 0.00000001266 61.0
SYD3_k127_5160375_4 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004251 611.0
SYD3_k127_5160375_40 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000001347 57.0
SYD3_k127_5160375_41 Anti-sigma-K factor rskA - - - 0.0000002811 61.0
SYD3_k127_5160375_5 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004786 479.0
SYD3_k127_5160375_6 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 413.0
SYD3_k127_5160375_7 Rieske (2fe-2S) K15060 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005244 363.0
SYD3_k127_5160375_8 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 337.0
SYD3_k127_5160375_9 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 328.0
SYD3_k127_5213741_0 Bacterial lipid A biosynthesis acyltransferase K02517,K22311 - 2.3.1.241,2.3.1.265 0.00000000000000000000000000000000000000002767 175.0
SYD3_k127_5213741_1 Kdo2-lipid A biosynthetic process K02517,K22311 - 2.3.1.241,2.3.1.265 0.00000000000000000000000000000003985 145.0
SYD3_k127_5213741_2 Belongs to the UPF0312 family - - - 0.000000000000000000000000004104 118.0
SYD3_k127_5213741_3 Hydrolase, alpha beta domain protein K00433 - 1.11.1.10 0.0000000000000001021 91.0
SYD3_k127_5360029_0 PFAM Type II secretion system protein E K02283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 516.0
SYD3_k127_5360029_1 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002625 305.0
SYD3_k127_5360029_10 - - - - 0.0000000000000000000000000000005829 124.0
SYD3_k127_5360029_11 PAP2 superfamily - - - 0.0000000000000000000000000289 123.0
SYD3_k127_5360029_12 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.00000000000000000000005717 110.0
SYD3_k127_5360029_13 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000004852 97.0
SYD3_k127_5360029_14 family 25 K01185,K07273 GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.2.1.17 0.000000000000000001473 99.0
SYD3_k127_5360029_15 - - - - 0.0000003795 54.0
SYD3_k127_5360029_2 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004132 264.0
SYD3_k127_5360029_3 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000005956 238.0
SYD3_k127_5360029_4 ATPase MipZ K02282 - - 0.00000000000000000000000000000000000000000000000000000000000003127 231.0
SYD3_k127_5360029_5 Glycosyltransferase family 87 - - - 0.00000000000000000000000000000000000000000000000000000000006902 219.0
SYD3_k127_5360029_6 PFAM type II secretion system protein K12511 - - 0.0000000000000000000000000000000000000000000000000000000111 209.0
SYD3_k127_5360029_7 type II secretion system K12510 - - 0.000000000000000000000000000000000000000000000000000006224 205.0
SYD3_k127_5360029_8 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000262 178.0
SYD3_k127_5360029_9 redox protein, regulator of disulfide bond formation - - - 0.00000000000000000000000000000000006305 147.0
SYD3_k127_5476871_0 Amidohydrolase K03392,K10220 - 4.1.1.45,4.2.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 511.0
SYD3_k127_5476871_1 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 496.0
SYD3_k127_5476871_10 methyltransferase K18846 - 2.1.1.180 0.00000000000000000000000001036 118.0
SYD3_k127_5476871_11 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000009643 71.0
SYD3_k127_5476871_12 Transcriptional regulator - GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.000002907 56.0
SYD3_k127_5476871_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000543 482.0
SYD3_k127_5476871_3 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 350.0
SYD3_k127_5476871_4 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009144 302.0
SYD3_k127_5476871_5 PAC2 family - - - 0.000000000000000000000000000000000000000000000000000000000000000006091 236.0
SYD3_k127_5476871_6 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.000000000000000000000000000000000000000000000000000000000123 214.0
SYD3_k127_5476871_7 It is involved in the biological process described with DNA repair K20813 GO:0000122,GO:0000166,GO:0000287,GO:0000700,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003712,GO:0003824,GO:0004844,GO:0005080,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005886,GO:0006139,GO:0006220,GO:0006244,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006298,GO:0006304,GO:0006355,GO:0006357,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008263,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009219,GO:0009223,GO:0009262,GO:0009264,GO:0009394,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0017076,GO:0018130,GO:0019104,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0030554,GO:0030983,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031402,GO:0031404,GO:0031420,GO:0031974,GO:0031981,GO:0032091,GO:0032182,GO:0032183,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035510,GO:0035511,GO:0035561,GO:0035562,GO:0035639,GO:0036094,GO:0040029,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043393,GO:0043412,GO:0043621,GO:0043739,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044728,GO:0045008,GO:0045892,GO:0045934,GO:0045995,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051098,GO:0051100,GO:0051171,GO:0051172,GO:0051239,GO:0051252,GO:0051253,GO:0051336,GO:0051716,GO:0055086,GO:0055114,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0070988,GO:0070989,GO:0071704,GO:0071944,GO:0072527,GO:0072529,GO:0080090,GO:0080111,GO:0090304,GO:0097159,GO:0097367,GO:0097506,GO:0140097,GO:0140110,GO:1901135,GO:1901136,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1902544,GO:1902679,GO:1903506,GO:1903507,GO:2000026,GO:2000112,GO:2000113,GO:2001141 3.2.2.29 0.00000000000000000000000000000000000000001397 169.0
SYD3_k127_5476871_8 PFAM cytochrome c oxidase, subunit III K02276,K02299 - 1.9.3.1 0.00000000000000000000000000000000000000293 158.0
SYD3_k127_5476871_9 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000002333 148.0
SYD3_k127_5480322_0 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 4.801e-219 693.0
SYD3_k127_5480322_1 Ftsk_gamma K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 522.0
SYD3_k127_5480322_2 Citrate synthase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 459.0
SYD3_k127_5480322_3 Amidohydrolase K10220 - 4.2.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 314.0
SYD3_k127_5480322_4 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.0000000000000000000000000000000000000002946 162.0
SYD3_k127_5480322_5 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000008574 128.0
SYD3_k127_5480322_6 Domain of unknown function (DUF309) K09763 - - 0.000000000000000000000246 101.0
SYD3_k127_5520621_0 Flavin containing amine oxidoreductase K06954 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 331.0
SYD3_k127_5520621_1 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 322.0
SYD3_k127_5520621_10 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000003817 69.0
SYD3_k127_5520621_11 Universal stress protein family - - - 0.00000007853 60.0
SYD3_k127_5520621_2 Divalent cation transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001332 271.0
SYD3_k127_5520621_3 short-chain dehydrogenase K07124 - - 0.0000000000000000000000000000000000000000000000003017 187.0
SYD3_k127_5520621_4 HpcH/HpaI aldolase/citrate lyase family K02510 - 4.1.2.52 0.0000000000000000000000000000000000000000000003376 179.0
SYD3_k127_5520621_6 Protein of unknown function (DUF1365) K09701 - - 0.0000000000000000000000000000000000000001239 161.0
SYD3_k127_5520621_7 Predicted membrane protein (DUF2177) - - - 0.000000000000000000000000001153 118.0
SYD3_k127_5520621_8 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000002898 114.0
SYD3_k127_5520621_9 ABC-type dipeptide transport system periplasmic component K02035 - - 0.0000000000000000002343 103.0
SYD3_k127_5561665_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 7.108e-227 738.0
SYD3_k127_5561665_1 signal peptide peptidase SppA, 36K type - - - 0.00000000000000000000000000000000000000004715 158.0
SYD3_k127_5561665_2 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000002946 160.0
SYD3_k127_5561665_3 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000002144 144.0
SYD3_k127_5561665_4 - - - - 0.000000000068 68.0
SYD3_k127_5698294_0 acetolactate synthase K01576,K01652 - 2.2.1.6,4.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 479.0
SYD3_k127_5698294_1 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008379 443.0
SYD3_k127_5698294_2 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 300.0
SYD3_k127_5698294_3 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781 - 5.1.2.2 0.000000000000000000000000000000000000000000000000000000007229 218.0
SYD3_k127_5698294_5 Copper binding proteins, plastocyanin/azurin family - - - 0.000000003461 66.0
SYD3_k127_5698294_6 acyl-CoA dehydrogenase K22027 - 1.14.13.235 0.00000008366 57.0
SYD3_k127_572152_0 Predicted membrane protein (DUF2207) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 359.0
SYD3_k127_572152_1 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005295 306.0
SYD3_k127_572152_10 carboxymuconolactone decarboxylase - - - 0.000000000000000000000000000000000000000005215 162.0
SYD3_k127_572152_11 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000005563 166.0
SYD3_k127_572152_12 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000001287 132.0
SYD3_k127_572152_13 ferredoxin-thioredoxin reductase activity K17892 GO:0003674,GO:0003824,GO:0005488,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0015979,GO:0016491,GO:0016730,GO:0022900,GO:0030385,GO:0044237,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114 1.8.7.2 0.0000000000000000000000000000009001 123.0
SYD3_k127_572152_14 peroxiredoxin activity - - - 0.00000000000000000001074 98.0
SYD3_k127_572152_15 ferredoxin-thioredoxin reductase activity K17892 GO:0003674,GO:0003824,GO:0005488,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0015979,GO:0016491,GO:0016730,GO:0022900,GO:0030385,GO:0044237,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114 1.8.7.2 0.000000000000001303 77.0
SYD3_k127_572152_16 Winged helix-turn-helix DNA-binding - - - 0.000000000000003136 81.0
SYD3_k127_572152_17 protein conserved in bacteria - - - 0.00000000001565 73.0
SYD3_k127_572152_18 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.0000009244 56.0
SYD3_k127_572152_2 Lactonase, 7-bladed beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 298.0
SYD3_k127_572152_3 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 290.0
SYD3_k127_572152_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004168 261.0
SYD3_k127_572152_5 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000001148 250.0
SYD3_k127_572152_6 cysteine-tRNA ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000004872 243.0
SYD3_k127_572152_7 N-terminal TM domain of oligopeptide transport permease C K02034,K15582 - - 0.00000000000000000000000000000000000000000000000000000000000000001156 237.0
SYD3_k127_572152_8 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000006898 224.0
SYD3_k127_572152_9 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000002525 180.0
SYD3_k127_5740815_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000008543 149.0
SYD3_k127_5740815_1 multi-organism process - - - 0.000000000000000739 78.0
SYD3_k127_5740815_2 AAA-like domain - - - 0.0000002986 61.0
SYD3_k127_5750932_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 478.0
SYD3_k127_5750932_1 response - - - 0.000000000000000000000000000000000000000000000000000000000000004237 228.0
SYD3_k127_5750932_2 Protein of unknown function (DUF3179) - - - 0.00000000000000000000000000000000000000000000000000000007027 210.0
SYD3_k127_5750932_3 ABC-type transport system, involved in lipoprotein release, permease component K02004 - - 0.0000000000000005805 93.0
SYD3_k127_5750932_4 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.0000000005323 64.0
SYD3_k127_582422_0 cell redox homeostasis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000583 347.0
SYD3_k127_582422_1 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000247 292.0
SYD3_k127_582422_10 - - - - 0.0000000003696 65.0
SYD3_k127_582422_11 - - - - 0.0000000003835 72.0
SYD3_k127_582422_2 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005408 264.0
SYD3_k127_582422_3 Enoyl-CoA hydratase K15866 - 5.3.3.18 0.000000000000000000000000000000000000001129 158.0
SYD3_k127_582422_4 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000001266 149.0
SYD3_k127_582422_5 PFAM type II secretion system protein K12511 - - 0.000000000000000000000000000000000144 145.0
SYD3_k127_582422_6 Type II secretion system K12510 - - 0.0000000000000000000000000000003459 126.0
SYD3_k127_582422_7 ABC transporter substrate-binding protein K02035 - - 0.0000000000000000000000001107 123.0
SYD3_k127_582422_8 PFAM Rieske 2Fe-2S domain protein K00363,K05710 - 1.7.1.15 0.0000000000007628 77.0
SYD3_k127_582422_9 aspartic-type endopeptidase activity K02654 - 3.4.23.43 0.000000000002725 77.0
SYD3_k127_5850036_0 Binding-protein-dependent transport systems inner membrane component K02011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006989 520.0
SYD3_k127_5850036_1 mannose-ethanolamine phosphotransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 492.0
SYD3_k127_5850036_10 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000000000000001698 183.0
SYD3_k127_5850036_11 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000004346 205.0
SYD3_k127_5850036_12 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000007615 168.0
SYD3_k127_5850036_13 ABC-type dipeptide transport system periplasmic component - - - 0.00000000000000000000000000000000004743 153.0
SYD3_k127_5850036_14 PFAM GYD family protein - - - 0.00000000000000000003989 93.0
SYD3_k127_5850036_15 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms K07027 - - 0.00000000000002437 88.0
SYD3_k127_5850036_16 Major intrinsic protein - - - 0.0000000000008535 73.0
SYD3_k127_5850036_17 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000007092 71.0
SYD3_k127_5850036_18 Low iron-inducible periplasmic protein - - - 0.00000001862 66.0
SYD3_k127_5850036_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 440.0
SYD3_k127_5850036_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002483 380.0
SYD3_k127_5850036_4 Rieske 2Fe-2S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 351.0
SYD3_k127_5850036_5 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 358.0
SYD3_k127_5850036_6 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004678 327.0
SYD3_k127_5850036_7 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005484 275.0
SYD3_k127_5850036_8 Methionine synthase K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003726 277.0
SYD3_k127_5850036_9 Phosphoenolpyruvate phosphomutase - - - 0.000000000000000000000000000000000000000000000000000000000344 214.0
SYD3_k127_5863212_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007174 411.0
SYD3_k127_5863212_1 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000004369 177.0
SYD3_k127_5863212_2 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000007242 173.0
SYD3_k127_5878390_0 Amino acid permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 553.0
SYD3_k127_5878390_1 regulator K07667 - - 0.0000000000000000000000000000000000000000000000000000000000002499 226.0
SYD3_k127_5878390_2 Histidine kinase K07646 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000129 215.0
SYD3_k127_5878390_3 extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000007803 184.0
SYD3_k127_5878390_4 Luciferase-like monooxygenase - - - 0.00000000000000000000000000004784 130.0
SYD3_k127_5878390_5 Monooxygenase K14733 - 1.14.13.107 0.00000000000003868 83.0
SYD3_k127_5878390_6 Luciferase-like monooxygenase - - - 0.000002612 57.0
SYD3_k127_5878390_7 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0001162 54.0
SYD3_k127_5878390_8 Belongs to the 'phage' integrase family K04763 - - 0.0009967 46.0
SYD3_k127_5957371_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009416 419.0
SYD3_k127_5957371_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 406.0
SYD3_k127_5957371_10 COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase - - - 0.000000000000000000000000000000000000000005469 162.0
SYD3_k127_5957371_11 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 GO:0003674,GO:0003824,GO:0003861,GO:0016829,GO:0016835,GO:0016836 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000004775 157.0
SYD3_k127_5957371_12 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000002726 138.0
SYD3_k127_5957371_13 amine dehydrogenase activity - - - 0.000000001578 58.0
SYD3_k127_5957371_2 Bacterial protein of unknown function (DUF839) K07093 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 396.0
SYD3_k127_5957371_3 MmgE/PrpD family K01720 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009268,GO:0009628,GO:0009987,GO:0010447,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017001,GO:0017144,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019679,GO:0019752,GO:0030312,GO:0032787,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0046459,GO:0047547,GO:0050896,GO:0071704,GO:0071944,GO:0072329,GO:1901575 4.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 335.0
SYD3_k127_5957371_4 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 312.0
SYD3_k127_5957371_5 Thioesterase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002216 261.0
SYD3_k127_5957371_6 2-keto-3-deoxy-L-rhamnonate aldolase activity K02510 - 4.1.2.52 0.0000000000000000000000000000000000000000000000000000000000000000000004 246.0
SYD3_k127_5957371_7 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000001884 219.0
SYD3_k127_5957371_8 Rdx family K07401 - - 0.00000000000000000000000000000000000000000005003 161.0
SYD3_k127_5957371_9 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000005113 178.0
SYD3_k127_5987009_0 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 335.0
SYD3_k127_5987009_1 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K15580 - - 0.0000000000000000000005771 111.0
SYD3_k127_5987009_2 cysteine dioxygenase type I - - - 0.000000000000000002889 92.0
SYD3_k127_6019981_0 DNA ligase K01971 - 6.5.1.1 2.779e-245 787.0
SYD3_k127_6019981_1 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 390.0
SYD3_k127_6019981_10 PFAM regulatory protein LuxR - - - 0.00000000000000000000000000000000000000000000000000000000000001271 231.0
SYD3_k127_6019981_11 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000000000000001839 183.0
SYD3_k127_6019981_12 histidine kinase, dimerisation and phosphoacceptor region - - - 0.00000000000000000000000000000000000002531 157.0
SYD3_k127_6019981_13 stress protein (general stress protein 26) - - - 0.00000000000000000007687 99.0
SYD3_k127_6019981_14 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000332 100.0
SYD3_k127_6019981_15 Acetyltransferase (GNAT) family - - - 0.0000000007912 68.0
SYD3_k127_6019981_16 Beta-lactamase class A K17836 - 3.5.2.6 0.000000002155 69.0
SYD3_k127_6019981_17 - - - - 0.00000117 59.0
SYD3_k127_6019981_18 Membrane-bound metal-dependent hydrolase - - - 0.0002382 50.0
SYD3_k127_6019981_2 Reductase C-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007246 354.0
SYD3_k127_6019981_3 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005542 300.0
SYD3_k127_6019981_4 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008955 300.0
SYD3_k127_6019981_5 Methionine synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001541 281.0
SYD3_k127_6019981_6 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004021 274.0
SYD3_k127_6019981_7 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4-amino-5-aminomethyl-2-methylpyrimidine to 4-amino- 5-hydroxymethyl-2-methylpyrimidine (HMP) K03707 - 3.5.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000001709 259.0
SYD3_k127_6019981_8 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001272 245.0
SYD3_k127_6019981_9 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000008683 232.0
SYD3_k127_6043097_0 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 376.0
SYD3_k127_6043097_1 protein possibly involved in utilization of glycolate and propanediol - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001157 259.0
SYD3_k127_6043097_2 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000006568 255.0
SYD3_k127_6043097_3 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000005539 199.0
SYD3_k127_6043097_4 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000103 156.0
SYD3_k127_6043097_5 DNA-binding transcription factor activity - - - 0.000000000000000000000000000000002189 133.0
SYD3_k127_6043097_6 MobA-like NTP transferase domain K03752 - 2.7.7.77 0.0000000000000000000000000001939 123.0
SYD3_k127_6043097_7 COGs COG4405 conserved - - - 0.0000000000000000000000009152 110.0
SYD3_k127_6043097_8 - - - - 0.0000000001097 74.0
SYD3_k127_6043097_9 Tetratricopeptide repeat - - - 0.00001791 56.0
SYD3_k127_6097470_0 metallopeptidase activity K03568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005521 479.0
SYD3_k127_6097470_1 Methyltransferase type 12 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 383.0
SYD3_k127_6097470_10 PFAM Histidine triad (HIT) protein K02503 - - 0.000000000000005914 78.0
SYD3_k127_6097470_11 Domain of unknown function (DUF4188) - - - 0.00005102 52.0
SYD3_k127_6097470_2 Domain of unknown function (DUF4131) K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 365.0
SYD3_k127_6097470_3 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989,K02428 - 2.7.7.56,3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009466 298.0
SYD3_k127_6097470_4 Major facilitator Superfamily K00943,K08217,K18833 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 295.0
SYD3_k127_6097470_5 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005342 271.0
SYD3_k127_6097470_6 Putative neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000005307 164.0
SYD3_k127_6097470_7 Competence protein ComEA K02237 - - 0.000000000000000000000000001162 119.0
SYD3_k127_6097470_8 Phage integrase family - - - 0.000000000000000000000000004576 116.0
SYD3_k127_6097470_9 - - - - 0.0000000000000000002025 90.0
SYD3_k127_6138157_0 PFAM acetyl-CoA hydrolase transferase K01067 - 3.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 515.0
SYD3_k127_6138157_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 351.0
SYD3_k127_6138157_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001696 267.0
SYD3_k127_6138157_3 Imidazoleglycerol-phosphate dehydratase K00817,K01089,K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.9,3.1.3.15,4.2.1.19 0.00000000000000000000000000000000000000000000000000000000004935 216.0
SYD3_k127_6138157_4 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013,K15509 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23,1.1.1.308 0.0000000000000000000000000000000000000000000000000428 183.0
SYD3_k127_6138157_5 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000000000000001827 170.0
SYD3_k127_6138157_6 ABC-2 family transporter protein - - - 0.000000000000000000000000000000001654 143.0
SYD3_k127_6138157_7 Belongs to the universal stress protein A family - - - 0.0007193 49.0
SYD3_k127_6138157_8 domain, Protein - - - 0.0009868 47.0
SYD3_k127_627003_0 Cation transporter/ATPase, N-terminus K01537,K01539 - 3.6.3.8,3.6.3.9 9.171e-283 895.0
SYD3_k127_627003_1 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001903 524.0
SYD3_k127_627003_10 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000003953 126.0
SYD3_k127_627003_11 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000003926 122.0
SYD3_k127_627003_12 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000193 83.0
SYD3_k127_627003_13 PFAM isochorismatase hydrolase K08281 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006766,GO:0006767,GO:0006769,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008936,GO:0009820,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0017144,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0071704,GO:0072524,GO:1901360,GO:1901564 3.5.1.19 0.00001629 48.0
SYD3_k127_627003_2 Zinc-binding dehydrogenase K00121 - 1.1.1.1,1.1.1.284 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005335 363.0
SYD3_k127_627003_3 phosphogluconate dehydrogenase (decarboxylating) activity K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 346.0
SYD3_k127_627003_4 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004951 310.0
SYD3_k127_627003_5 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003836 292.0
SYD3_k127_627003_6 Pfam Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000005613 233.0
SYD3_k127_627003_7 DNA-templated transcription, termination K03628 - - 0.000000000000000000000000000000000001543 140.0
SYD3_k127_627003_8 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000003793 141.0
SYD3_k127_627003_9 decarboxylase K01607 - 4.1.1.44 0.000000000000000000000000000002963 123.0
SYD3_k127_628850_0 WD40-like Beta Propeller Repeat - - - 3.471e-271 848.0
SYD3_k127_628850_1 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004733 271.0
SYD3_k127_628850_2 Nitroreductase family - - - 0.000000000000000000000000000000002799 136.0
SYD3_k127_628850_3 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.00000000000000006736 80.0
SYD3_k127_6388968_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007218 396.0
SYD3_k127_6388968_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 374.0
SYD3_k127_6388968_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 367.0
SYD3_k127_6388968_3 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009984 349.0
SYD3_k127_6388968_4 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000498 346.0
SYD3_k127_6388968_5 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000337 171.0
SYD3_k127_6388968_6 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.00000000000000000000000186 106.0
SYD3_k127_6388968_7 Bacterial PH domain - - - 0.00000000000000504 85.0
SYD3_k127_6388968_8 - - - - 0.000000696 55.0
SYD3_k127_6402454_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 4.999e-205 664.0
SYD3_k127_6402454_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004555 382.0
SYD3_k127_6402454_10 TfoX N-terminal domain - - - 0.0000000000000000000000002815 111.0
SYD3_k127_6402454_2 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004738 346.0
SYD3_k127_6402454_3 Rieske [2Fe-2S] domain K19982 - - 0.000000000000000000000000000000000000000000000000000000000000000000004811 253.0
SYD3_k127_6402454_4 Fumarylacetoacetate (FAA) hydrolase family K02554 - 4.2.1.80 0.000000000000000000000000000000000000000000000000000000000005478 216.0
SYD3_k127_6402454_5 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000000001747 220.0
SYD3_k127_6402454_6 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000536 199.0
SYD3_k127_6402454_7 hydrolase activity, acting on ester bonds K01055 - 3.1.1.24 0.0000000000000000000000000000000000000006983 162.0
SYD3_k127_6402454_8 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000004203 144.0
SYD3_k127_6402454_9 PFAM Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000255 120.0
SYD3_k127_6436585_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 1.568e-288 901.0
SYD3_k127_6436585_1 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009084 374.0
SYD3_k127_6436585_10 Methionine synthase K00549 - 2.1.1.14 0.000000000000000000000000000000006948 137.0
SYD3_k127_6436585_2 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000007185 269.0
SYD3_k127_6436585_3 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004285 245.0
SYD3_k127_6436585_4 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001171 231.0
SYD3_k127_6436585_5 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.000000000000000000000000000000000000000000000000000000001368 208.0
SYD3_k127_6436585_6 Kelch repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000007879 205.0
SYD3_k127_6436585_7 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 GO:0008150,GO:0040007 2.7.4.16 0.00000000000000000000000000000000000000000000000004651 189.0
SYD3_k127_6436585_8 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000013 153.0
SYD3_k127_6436585_9 chain release factor - - - 0.0000000000000000000000000000000004479 144.0
SYD3_k127_6449343_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 1.366e-242 766.0
SYD3_k127_6449343_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 555.0
SYD3_k127_6449343_10 sugar fermentation stimulation protein K06206 - - 0.00000000000000000000000000000000000000000000000000009393 194.0
SYD3_k127_6449343_11 PFAM HhH-GPD K07457 - - 0.00000000000000000000000000000000000000000002812 177.0
SYD3_k127_6449343_12 Dehydrogenase - - - 0.0000000000000000000000000000000000001191 152.0
SYD3_k127_6449343_13 Bacterial Ig-like domain - - - 0.00000000000000000000000000005975 131.0
SYD3_k127_6449343_14 SnoaL-like polyketide cyclase - - - 0.0000000000000000000000000002719 118.0
SYD3_k127_6449343_15 Chloramphenicol phosphotransferase-like protein - - - 0.00000000000000000000000001212 120.0
SYD3_k127_6449343_16 Uncharacterised protein family UPF0066 - - - 0.0000000000000000000000005474 110.0
SYD3_k127_6449343_17 Domain of unknown function (DUF4349) - - - 0.000000000000006501 87.0
SYD3_k127_6449343_19 AAA ATPase domain K02486 - 2.7.13.3 0.000000001446 66.0
SYD3_k127_6449343_2 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 541.0
SYD3_k127_6449343_20 - - - - 0.00000004992 58.0
SYD3_k127_6449343_22 - - - - 0.000001215 53.0
SYD3_k127_6449343_3 Nitrite and sulphite reductase 4Fe-4S domain K00366,K00381 - 1.7.7.1,1.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 485.0
SYD3_k127_6449343_4 Alpha/beta hydrolase family K01561 - 3.8.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 385.0
SYD3_k127_6449343_5 Serine hydroxymethyltransferase K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004133 314.0
SYD3_k127_6449343_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 308.0
SYD3_k127_6449343_7 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 303.0
SYD3_k127_6449343_8 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001425 298.0
SYD3_k127_6449343_9 COG0657 Esterase lipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002225 255.0
SYD3_k127_6491492_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000003132 274.0
SYD3_k127_6491492_1 UDP-glucoronosyl and UDP-glucosyl transferase - - - 0.000000000000000000000000000000000000000000005845 181.0
SYD3_k127_6491492_2 Bacterial transcription activator, effector binding domain - - - 0.00000000000000000000000000001286 128.0
SYD3_k127_6491492_3 PFAM MOSC domain - - - 0.00000000007689 69.0
SYD3_k127_6606193_0 arginyl-tRNA aminoacylation K01887 - 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005895 603.0
SYD3_k127_6687557_0 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 562.0
SYD3_k127_6687557_1 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 329.0
SYD3_k127_6687557_10 Trehalose utilisation K09992 - - 0.0000000000000000000000000000000000000000002214 167.0
SYD3_k127_6687557_11 - - - - 0.0000000000000000000000000000000000000000007241 161.0
SYD3_k127_6687557_12 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000001402 172.0
SYD3_k127_6687557_13 YCII-related domain - - - 0.0000000000000000000000000000000000001313 149.0
SYD3_k127_6687557_14 peptidase inhibitor activity - - - 0.00000000000000000000000000001567 134.0
SYD3_k127_6687557_15 Protein of unknown function (DUF4012) - - - 0.0000000000000000000000007207 121.0
SYD3_k127_6687557_16 oxidoreductase activity, acting on CH-OH group of donors K09386 - - 0.000000002961 66.0
SYD3_k127_6687557_17 Hep Hag repeat protein - - - 0.000004763 59.0
SYD3_k127_6687557_18 conserved protein, contains double-stranded beta-helix domain - - - 0.00001758 52.0
SYD3_k127_6687557_19 Protease prsW family - - - 0.00002212 55.0
SYD3_k127_6687557_2 PFAM Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 328.0
SYD3_k127_6687557_20 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.0009765 48.0
SYD3_k127_6687557_3 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001502 243.0
SYD3_k127_6687557_4 ABC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000002561 248.0
SYD3_k127_6687557_5 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000008153 226.0
SYD3_k127_6687557_6 cell redox homeostasis - - - 0.0000000000000000000000000000000000000000000000000000000000001624 219.0
SYD3_k127_6687557_7 COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM homologs K00087,K03519 - 1.17.1.4,1.2.5.3 0.000000000000000000000000000000000000000000000000000000000001133 220.0
SYD3_k127_6687557_8 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000001393 199.0
SYD3_k127_6687557_9 2Fe-2S -binding domain protein K03518,K07302,K19819 - 1.2.5.3,1.3.99.16,1.5.99.4 0.000000000000000000000000000000000000000000000000000000629 197.0
SYD3_k127_6767796_0 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652,K03852 - 2.2.1.6,2.3.3.15 4.276e-235 739.0
SYD3_k127_6767796_1 cell redox homeostasis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 407.0
SYD3_k127_6767796_10 - - - - 0.000000000000001298 80.0
SYD3_k127_6767796_11 - - - - 0.000000000000007071 76.0
SYD3_k127_6767796_2 Diphthamide synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 297.0
SYD3_k127_6767796_3 cellular response to dsDNA K07178 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000001333 218.0
SYD3_k127_6767796_4 carboxymuconolactone decarboxylase - - - 0.000000000000000000000000000000000000000000000001634 179.0
SYD3_k127_6767796_5 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000004119 146.0
SYD3_k127_6767796_6 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) - - - 0.000000000000000000000000000000000014 136.0
SYD3_k127_6767796_7 ABC-type dipeptide transport system periplasmic component K12368 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006457,GO:0006810,GO:0006857,GO:0008150,GO:0009987,GO:0015833,GO:0020037,GO:0030288,GO:0030313,GO:0031975,GO:0033218,GO:0042277,GO:0042597,GO:0042886,GO:0042938,GO:0044464,GO:0046906,GO:0048037,GO:0051179,GO:0051234,GO:0061077,GO:0071702,GO:0071705,GO:0097159,GO:1901363 - 0.00000000000000000000000004937 124.0
SYD3_k127_6767796_8 Electron transfer DM13 - - - 0.000000000000000002445 94.0
SYD3_k127_6767796_9 Protein of unknown function (DUF2283) - - - 0.00000000000000003386 83.0
SYD3_k127_6778328_0 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 297.0
SYD3_k127_6778328_1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005547 261.0
SYD3_k127_6778328_2 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000001871 213.0
SYD3_k127_6778328_3 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000001744 145.0
SYD3_k127_6778328_4 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000002181 134.0
SYD3_k127_6778328_5 helix_turn_helix, cAMP Regulatory protein K10914 GO:0000166,GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010675,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030312,GO:0030551,GO:0030552,GO:0030554,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043565,GO:0044212,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0062012,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000874,GO:2001141 - 0.00000000000000000000000000001943 126.0
SYD3_k127_6778328_6 Predicted membrane protein (DUF2142) - - - 0.00000000000000000000000001408 124.0
SYD3_k127_6778328_7 glycosyl transferase family 2 K07011 - - 0.000000000000000000001291 106.0
SYD3_k127_6778328_8 methyltransferase - - - 0.000000000000001845 89.0
SYD3_k127_6778328_9 Lysylphosphatidylglycerol synthase TM region - - - 0.000008687 58.0
SYD3_k127_6812570_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 408.0
SYD3_k127_6812570_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 371.0
SYD3_k127_6812570_10 PFAM Cation efflux - - - 0.000000000000000000000000000000000000000000003455 177.0
SYD3_k127_6812570_11 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000001351 175.0
SYD3_k127_6812570_12 PFAM Cytochrome c oxidase caa3-type, assembly factor CtaG-related - - - 0.00000000000000000000000000000000000000000101 167.0
SYD3_k127_6812570_13 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000002577 169.0
SYD3_k127_6812570_14 RibD C-terminal domain K14654 - 1.1.1.302 0.00000000000000000000000000000000000000205 161.0
SYD3_k127_6812570_15 - - - - 0.000000000000000000000000000000000000005482 169.0
SYD3_k127_6812570_16 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000007305 159.0
SYD3_k127_6812570_17 PFAM regulatory protein, ArsR K21903 - - 0.0000000000000000000000000000002315 127.0
SYD3_k127_6812570_18 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000001921 123.0
SYD3_k127_6812570_19 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000005064 111.0
SYD3_k127_6812570_2 Uncharacterized protein family UPF0004 K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 304.0
SYD3_k127_6812570_20 COG2133 Glucose sorbosone dehydrogenases - - - 0.0000000000000000000000001804 113.0
SYD3_k127_6812570_21 Belongs to the UPF0312 family - - - 0.00000000000000000001602 102.0
SYD3_k127_6812570_22 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.00000000000000002416 85.0
SYD3_k127_6812570_23 Protein of unknown function (DUF503) K09764 - - 0.000000000000002274 79.0
SYD3_k127_6812570_24 Protein of unknown function (DUF1232) - - - 0.0000000000005289 74.0
SYD3_k127_6812570_25 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K05580 - 1.6.5.3 0.000000000000711 72.0
SYD3_k127_6812570_26 PFAM AhpC TSA family K03386 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0020012,GO:0030682,GO:0042221,GO:0043207,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0051920,GO:0052060,GO:0052173,GO:0052200,GO:0052376,GO:0052551,GO:0052564,GO:0052565,GO:0052572,GO:0055114,GO:0070887,GO:0075136,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.0000000002301 62.0
SYD3_k127_6812570_27 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000001464 64.0
SYD3_k127_6812570_3 PFAM Sodium calcium exchanger membrane region K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 299.0
SYD3_k127_6812570_4 calcium, potassium:sodium antiporter activity K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004756 290.0
SYD3_k127_6812570_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001258 275.0
SYD3_k127_6812570_6 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000001721 233.0
SYD3_k127_6812570_7 Belongs to the NiCoT transporter (TC 2.A.52) family K07241 - - 0.0000000000000000000000000000000000000000000000000000000000002174 224.0
SYD3_k127_6812570_8 Carboxylesterase family - - - 0.00000000000000000000000000000000000000000000000000000001493 208.0
SYD3_k127_6812570_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000002571 203.0
SYD3_k127_6833377_0 Phage capsid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007564 314.0
SYD3_k127_6833377_1 Protein of unknown function (DUF3090) - - - 0.00000000000000000000000135 110.0
SYD3_k127_6833377_2 translation initiation inhibitor, yjgF family K04782 - 4.2.99.21 0.000000000000000000000009703 103.0
SYD3_k127_6833377_3 - - - - 0.0000000005451 71.0
SYD3_k127_6860367_0 Elongation factor SelB, winged helix K03833 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006341 589.0
SYD3_k127_6860367_1 Acyl-CoA dehydrogenase, middle domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 370.0
SYD3_k127_6860367_2 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway K03707 - 3.5.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000001201 263.0
SYD3_k127_6860367_3 methyltransferase small K00564 - 2.1.1.172 0.0000000000000000000000000000000000000000003965 165.0
SYD3_k127_6860367_4 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0000000000000000000000000000000000000136 146.0
SYD3_k127_6860367_5 Alpha beta hydrolase - - - 0.000000000000004049 78.0
SYD3_k127_6860367_6 Chaperone - - - 0.00004229 53.0
SYD3_k127_6865504_0 Methionine synthase K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008 410.0
SYD3_k127_6865504_1 Domain of unknown function (DUF2088) K22373 - 5.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008059 328.0
SYD3_k127_6865504_2 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000009441 211.0
SYD3_k127_6865504_3 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000001271 207.0
SYD3_k127_6933107_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 8.689e-303 968.0
SYD3_k127_6933107_1 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 536.0
SYD3_k127_6933107_10 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K18917 - 1.20.4.3 0.0000000000000000000000000000000000000000000000000132 188.0
SYD3_k127_6933107_11 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000000000000000000000000000003529 165.0
SYD3_k127_6933107_12 Bacterial protein of unknown function (DUF937) - - - 0.000000000000000000000000000000000000001424 153.0
SYD3_k127_6933107_13 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000005537 134.0
SYD3_k127_6933107_14 Luciferase-like monooxygenase - - - 0.0000000000000000000007994 106.0
SYD3_k127_6933107_15 type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis - - - 0.00000000000000000004926 100.0
SYD3_k127_6933107_16 Cupin 2, conserved barrel domain protein - - - 0.00000000000000009237 88.0
SYD3_k127_6933107_17 ggdef domain - - - 0.0000000003985 72.0
SYD3_k127_6933107_18 - - - - 0.000000003148 62.0
SYD3_k127_6933107_19 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000001628 63.0
SYD3_k127_6933107_2 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 405.0
SYD3_k127_6933107_3 L-carnitine dehydratase bile acid-inducible protein F - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005096 406.0
SYD3_k127_6933107_4 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 333.0
SYD3_k127_6933107_5 the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007919 305.0
SYD3_k127_6933107_6 3-carboxyethylcatechol 2,3-dioxygenase activity K05713 - 1.13.11.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007263 290.0
SYD3_k127_6933107_7 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005098 270.0
SYD3_k127_6933107_8 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000006728 254.0
SYD3_k127_6933107_9 Aldo Keto reductase - - - 0.000000000000000000000000000000000000000000000000009629 188.0
SYD3_k127_69798_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 3.252e-227 715.0
SYD3_k127_69798_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005821 591.0
SYD3_k127_7034325_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 6.139e-249 774.0
SYD3_k127_7034325_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 521.0
SYD3_k127_7034325_10 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006145 303.0
SYD3_k127_7034325_11 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001795 282.0
SYD3_k127_7034325_12 PFAM Chlorite dismutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009951 266.0
SYD3_k127_7034325_13 Pfam Wyosine base formation - - - 0.0000000000000000000000000000000000000000000000000000000000000000003544 237.0
SYD3_k127_7034325_14 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000577 226.0
SYD3_k127_7034325_15 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000002045 186.0
SYD3_k127_7034325_16 extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000006994 165.0
SYD3_k127_7034325_17 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000007476 159.0
SYD3_k127_7034325_18 acetyltransferase - - - 0.0000000000000000000000009906 114.0
SYD3_k127_7034325_19 helix_turn_helix multiple antibiotic resistance protein - GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000001225 81.0
SYD3_k127_7034325_2 LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005383 511.0
SYD3_k127_7034325_20 HAD-hyrolase-like K01560 - 3.8.1.2 0.00000000000192 78.0
SYD3_k127_7034325_21 Helix-turn-helix domain - - - 0.0000000003387 64.0
SYD3_k127_7034325_3 L-carnitine dehydratase bile acid-inducible protein F - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007632 496.0
SYD3_k127_7034325_4 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000445 458.0
SYD3_k127_7034325_5 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 394.0
SYD3_k127_7034325_6 Transcriptional regulator (AsnC family) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 355.0
SYD3_k127_7034325_7 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 339.0
SYD3_k127_7034325_8 L-carnitine dehydratase bile acid-inducible protein F - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 322.0
SYD3_k127_7034325_9 PFAM 2-nitropropane dioxygenase NPD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003229 322.0
SYD3_k127_7039520_0 PFAM phosphoesterase, RecJ domain protein K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 422.0
SYD3_k127_7039520_1 Cellulose biosynthesis protein BcsQ K03496 GO:0008150,GO:0022603,GO:0042173,GO:0042174,GO:0043937,GO:0043939,GO:0045595,GO:0045596,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0065007 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001068 270.0
SYD3_k127_7039520_10 DinB family - - - 0.000000000000000004884 90.0
SYD3_k127_7039520_2 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005365 265.0
SYD3_k127_7039520_3 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000000001173 209.0
SYD3_k127_7039520_4 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000000000000000000000000000001489 173.0
SYD3_k127_7039520_5 60Kd inner membrane protein K03217 - - 0.00000000000000000000000000000000000000000717 172.0
SYD3_k127_7039520_6 PFAM PfkB domain protein - - - 0.000000000000000000000000000000000000005957 160.0
SYD3_k127_7039520_7 PFAM single-stranded nucleic acid binding R3H domain protein K06346 - - 0.000000000000000000000000000000001064 143.0
SYD3_k127_7039520_8 PQQ enzyme repeat - - - 0.000000000000000000000002138 113.0
SYD3_k127_7039520_9 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000003163 109.0
SYD3_k127_7047235_0 PFAM Glycosyl transferase family 2 - - - 4.987e-269 888.0
SYD3_k127_7047235_1 ABC-type multidrug transport system ATPase and permease - - - 7.895e-196 670.0
SYD3_k127_7047235_10 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K03215,K06969,K14292 - 2.1.1.190,2.1.1.191 0.0000000000000000000000004894 111.0
SYD3_k127_7047235_11 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000003423 109.0
SYD3_k127_7047235_12 Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K15580 - - 0.000000000000000000001661 110.0
SYD3_k127_7047235_13 Rieske [2Fe-2S] domain - - - 0.000000000005528 68.0
SYD3_k127_7047235_14 transcriptional regulator - GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.000000008957 65.0
SYD3_k127_7047235_2 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004352 442.0
SYD3_k127_7047235_3 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 445.0
SYD3_k127_7047235_4 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 427.0
SYD3_k127_7047235_5 3-beta hydroxysteroid dehydrogenase/isomerase family K01710,K08678 - 4.1.1.35,4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006802 407.0
SYD3_k127_7047235_7 TRAP transporter, solute receptor (TAXI family K07080 - - 0.00000000000000000000000000000000000000002177 173.0
SYD3_k127_7047235_8 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000001388 164.0
SYD3_k127_7047235_9 extracellular solute-binding protein, family 5 K02035 - - 0.00000000000000000000000001127 126.0
SYD3_k127_7047278_0 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 415.0
SYD3_k127_7047278_1 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004778 340.0
SYD3_k127_7047278_2 oxidation-reduction process - - - 0.0000000000000000000000000000000000000000003915 179.0
SYD3_k127_7047278_3 - K11477 - - 0.00000000000000000000000000000000000002696 159.0
SYD3_k127_7047278_5 Rieske [2Fe-2S] domain - - - 0.000000000001504 68.0
SYD3_k127_707026_0 tryptophan synthase activity K01696,K06001 - 4.2.1.20 4.606e-210 661.0
SYD3_k127_707026_1 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 380.0
SYD3_k127_707026_10 PFAM Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000001815 100.0
SYD3_k127_707026_11 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000021 93.0
SYD3_k127_707026_12 YCII-related domain - - - 0.000000000000000734 82.0
SYD3_k127_707026_13 - - - - 0.000000000000008188 78.0
SYD3_k127_707026_14 DNA-binding transcription factor activity K03892 - - 0.0000000000001759 73.0
SYD3_k127_707026_15 23S rRNA-intervening sequence protein - - - 0.00000000001528 72.0
SYD3_k127_707026_16 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000001255 63.0
SYD3_k127_707026_17 - - - - 0.0000003493 61.0
SYD3_k127_707026_18 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.00002161 46.0
SYD3_k127_707026_2 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008646 372.0
SYD3_k127_707026_3 C-terminal domain of 1-Cys peroxiredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003109 321.0
SYD3_k127_707026_4 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008133 307.0
SYD3_k127_707026_5 CBS domain containing protein K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001241 285.0
SYD3_k127_707026_6 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000006736 164.0
SYD3_k127_707026_7 Serine aminopeptidase, S33 K01055 - 3.1.1.24 0.00000000000000000000000000000000000000789 155.0
SYD3_k127_707026_8 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000002677 144.0
SYD3_k127_707026_9 NIPSNAP - - - 0.00000000000000000000000000009969 124.0
SYD3_k127_7083317_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.0 1190.0
SYD3_k127_7083317_1 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003788 586.0
SYD3_k127_7083317_10 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 - 4.1.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000009097 268.0
SYD3_k127_7083317_11 carnitine dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003004 265.0
SYD3_k127_7083317_12 acr, cog1565 - - - 0.00000000000000000000000000000000000000000000000000000000000000000008505 246.0
SYD3_k127_7083317_13 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000001995 248.0
SYD3_k127_7083317_14 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000000000000000000000002135 207.0
SYD3_k127_7083317_15 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000003612 175.0
SYD3_k127_7083317_16 Pyridoxamine 5'-phosphate oxidase - - - 0.000000000000000000000000000000000000000001036 165.0
SYD3_k127_7083317_17 Reductive dehalogenase subunit K21566 - - 0.000000000000000000000000000000004786 145.0
SYD3_k127_7083317_18 NifU-like N terminal domain K04488 - - 0.0000000000000000000000000000009957 124.0
SYD3_k127_7083317_19 COGs COG3870 conserved - - - 0.00000000000000000000005457 109.0
SYD3_k127_7083317_2 Catalyzes two subsequent steps in gluconeogenesis the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3-phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P) K01622 - 3.1.3.11,4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 518.0
SYD3_k127_7083317_20 4Fe-4S binding domain - - - 0.00000000000000000000006273 110.0
SYD3_k127_7083317_21 Histidine kinase K07683 - 2.7.13.3 0.00000000000000000006723 105.0
SYD3_k127_7083317_22 - - - - 0.000000000000003649 79.0
SYD3_k127_7083317_24 Reductive dehalogenase subunit - - - 0.0004634 50.0
SYD3_k127_7083317_3 Amidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000392 456.0
SYD3_k127_7083317_4 Fructose-bisphosphate aldolase class-I K01623 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000361 426.0
SYD3_k127_7083317_5 cell redox homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000448 353.0
SYD3_k127_7083317_6 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 344.0
SYD3_k127_7083317_7 PFAM MmgE PrpD family K01720 - 4.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005342 300.0
SYD3_k127_7083317_8 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004316 288.0
SYD3_k127_7083317_9 spheroidene biosynthetic process K09844 GO:0003674,GO:0003824,GO:0006629,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016108,GO:0016109,GO:0016114,GO:0016116,GO:0016117,GO:0016122,GO:0016123,GO:0016829,GO:0016835,GO:0016836,GO:0018904,GO:0042440,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046148,GO:0071704,GO:1901178,GO:1901180,GO:1901503,GO:1901576 4.2.1.131 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006136 290.0
SYD3_k127_7172936_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1205.0
SYD3_k127_7172936_1 Rieske 2Fe-2S - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 510.0
SYD3_k127_7172936_10 Chain length determinant protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004139 255.0
SYD3_k127_7172936_11 Tetratricopeptide repeat K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000009516 246.0
SYD3_k127_7172936_12 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000001108 169.0
SYD3_k127_7172936_13 glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.0000000000000000000000000000000000213 139.0
SYD3_k127_7172936_14 Domain of unknown function (DUF4389) - - - 0.0000000000000000000000000000003183 131.0
SYD3_k127_7172936_15 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000009832 128.0
SYD3_k127_7172936_17 - - - - 0.0000005617 58.0
SYD3_k127_7172936_2 Drug exporters of the RND superfamily K06994,K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 499.0
SYD3_k127_7172936_3 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 386.0
SYD3_k127_7172936_4 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007084 333.0
SYD3_k127_7172936_5 Arylsulfotransferase (ASST) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004343 294.0
SYD3_k127_7172936_6 WYL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002508 270.0
SYD3_k127_7172936_7 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001138 270.0
SYD3_k127_7172936_8 oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000985 259.0
SYD3_k127_7172936_9 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003218 244.0
SYD3_k127_728777_0 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009742 604.0
SYD3_k127_728777_1 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 430.0
SYD3_k127_728777_10 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000001901 167.0
SYD3_k127_728777_11 Transcriptional regulator - - - 0.00000000000000000000000000000000983 139.0
SYD3_k127_728777_12 ABC transporter substrate-binding protein K02035 - - 0.00000000000000000000000000000004867 143.0
SYD3_k127_728777_13 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000002224 138.0
SYD3_k127_728777_14 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000008159 137.0
SYD3_k127_728777_15 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000001303 115.0
SYD3_k127_728777_16 - - - - 0.000000000000118 73.0
SYD3_k127_728777_17 - - - - 0.0000000001425 65.0
SYD3_k127_728777_18 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.00000004196 65.0
SYD3_k127_728777_19 - - - - 0.000001267 53.0
SYD3_k127_728777_2 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007975 413.0
SYD3_k127_728777_20 - - - - 0.00007125 55.0
SYD3_k127_728777_21 - - - - 0.0002844 47.0
SYD3_k127_728777_3 cell redox homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 361.0
SYD3_k127_728777_4 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 359.0
SYD3_k127_728777_5 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000000000000000000000000000007878 242.0
SYD3_k127_728777_6 cell redox homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000003346 232.0
SYD3_k127_728777_7 COGs COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.0000000000000000000000000000000000000000000000000000000001354 225.0
SYD3_k127_728777_8 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000007221 171.0
SYD3_k127_728777_9 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000001317 170.0
SYD3_k127_7506590_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255,K01259 GO:0001073,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006351,GO:0006355,GO:0006508,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009056,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016787,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042150,GO:0043170,GO:0043171,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043244,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0097718,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1903506,GO:2000112,GO:2001141 3.4.11.1,3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 502.0
SYD3_k127_7506590_1 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007035 361.0
SYD3_k127_7506590_10 NAD(P)-binding Rossmann-like domain K03153 - 1.4.3.19 0.000000000000000000000000000000000000000000000000000000000000000000000002357 260.0
SYD3_k127_7506590_11 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000005995 246.0
SYD3_k127_7506590_12 MazG nucleotide pyrophosphohydrolase domain K02499 - - 0.000000000000000000000000000000000000000000000000000000000000000418 231.0
SYD3_k127_7506590_13 ABC transporter permease - - - 0.00000000000000000000000000000000000000000000000001103 193.0
SYD3_k127_7506590_14 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000002351 180.0
SYD3_k127_7506590_15 PFAM NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000001108 177.0
SYD3_k127_7506590_16 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000006835 165.0
SYD3_k127_7506590_17 - - - - 0.00000000000000000000000000000000000000494 151.0
SYD3_k127_7506590_18 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788,K14153 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3,2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000003399 148.0
SYD3_k127_7506590_19 Beta-lactamase K07260 - 3.4.17.14 0.00000000000000000000000000000000001688 154.0
SYD3_k127_7506590_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005763 359.0
SYD3_k127_7506590_20 PAP2 superfamily - - - 0.0000000000000000000000000000000009929 139.0
SYD3_k127_7506590_21 Probable zinc-ribbon domain - - - 0.000000000000000000000000000000001497 133.0
SYD3_k127_7506590_22 Endoribonuclease L-PSP - - - 0.000000000000000000000000000003315 127.0
SYD3_k127_7506590_23 Transcriptional regulator - - - 0.0000000000000000000000000000704 122.0
SYD3_k127_7506590_24 Zincin-like metallopeptidase - - - 0.0000000000000000000000116 108.0
SYD3_k127_7506590_25 Thioredoxin - - - 0.0000000000000000001237 98.0
SYD3_k127_7506590_26 Protein of unknown function (DUF1461) - - - 0.0000000000000000009785 96.0
SYD3_k127_7506590_27 PFAM SPFH domain Band 7 family - - - 0.000008926 51.0
SYD3_k127_7506590_28 Carbohydrate binding domain K01183 - 3.2.1.14 0.00002033 57.0
SYD3_k127_7506590_3 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 GO:0000003,GO:0000160,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019954,GO:0023052,GO:0030436,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035556,GO:0035639,GO:0036094,GO:0043021,GO:0043022,GO:0043167,GO:0043168,GO:0043934,GO:0044424,GO:0044464,GO:0044877,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000553 354.0
SYD3_k127_7506590_4 F420-0:Gamma-glutamyl ligase K12234 - 6.3.2.31,6.3.2.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004731 303.0
SYD3_k127_7506590_5 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005936 304.0
SYD3_k127_7506590_6 Glycosyl transferase 4-like domain K08256 - 2.4.1.345 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 300.0
SYD3_k127_7506590_7 4,5-dihydroxyphthalate decarboxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001853 287.0
SYD3_k127_7506590_8 ATPases associated with a variety of cellular activities K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003036 255.0
SYD3_k127_7506590_9 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001797 263.0
SYD3_k127_7535816_0 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000397 251.0
SYD3_k127_7535816_1 3-carboxyethylcatechol 2,3-dioxygenase activity K05713 - 1.13.11.16 0.00000000000000000000000000000000000000000000000000000000000000007251 234.0
SYD3_k127_7535816_2 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000001896 207.0
SYD3_k127_7535816_3 Virulence factor BrkB K07058 - - 0.00000000000000000001169 102.0
SYD3_k127_7607377_0 Berberine and berberine like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005193 501.0
SYD3_k127_7607377_1 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000008383 256.0
SYD3_k127_7607377_10 Cupin 2, conserved barrel domain protein - - - 0.0000000003247 66.0
SYD3_k127_7607377_2 Major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000004536 246.0
SYD3_k127_7607377_3 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000008844 202.0
SYD3_k127_7607377_4 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000009161 191.0
SYD3_k127_7607377_5 - - - - 0.0000000000000000000000000000000000000003206 160.0
SYD3_k127_7607377_6 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000000001125 132.0
SYD3_k127_7607377_7 Acyl- CoA dehydrogenase type 2 domain - - - 0.0000000000000000000000008829 110.0
SYD3_k127_7607377_8 PFAM Flavin - - - 0.00000000000000000002197 98.0
SYD3_k127_7607377_9 BetI-type transcriptional repressor, C-terminal - - - 0.0000000002215 70.0
SYD3_k127_7624324_0 ABC transporter - - - 0.0 1320.0
SYD3_k127_7624324_1 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 479.0
SYD3_k127_7624324_10 MarR family transcriptional regulator - - - 0.0000000000000000000000000000001511 134.0
SYD3_k127_7624324_11 Oxidoreductase molybdopterin binding domain - - - 0.00000000000000000000001005 107.0
SYD3_k127_7624324_12 Uncharacterized protein domain (DUF2202) - - - 0.00000000000000000001499 107.0
SYD3_k127_7624324_13 TIGRFAM Protein of - - - 0.000000000001839 75.0
SYD3_k127_7624324_14 Phosphoribosyl transferase domain K07100 - - 0.0000000000378 73.0
SYD3_k127_7624324_15 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000003029 70.0
SYD3_k127_7624324_16 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000005418 56.0
SYD3_k127_7624324_17 Hemerythrin HHE cation binding domain - - - 0.000007611 55.0
SYD3_k127_7624324_18 conserved protein, contains double-stranded beta-helix domain - - - 0.00008495 50.0
SYD3_k127_7624324_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005737 336.0
SYD3_k127_7624324_3 Acyl-CoA dehydrogenase, C-terminal domain K22027 - 1.14.13.235 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009829 277.0
SYD3_k127_7624324_4 Vitamin k epoxide reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002431 244.0
SYD3_k127_7624324_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000004276 248.0
SYD3_k127_7624324_6 InterPro IPR014922 - - - 0.000000000000000000000000000000000000000000000000000000000009314 211.0
SYD3_k127_7624324_7 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000000000000000001141 205.0
SYD3_k127_7624324_8 YCII-related domain - - - 0.000000000000000000000000000000000000008047 153.0
SYD3_k127_7624324_9 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000004836 152.0
SYD3_k127_7637418_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372,K02567 - - 0.0 1144.0
SYD3_k127_7637418_1 nitrite transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006445 452.0
SYD3_k127_7637418_2 4 iron, 4 sulfur cluster binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 313.0
SYD3_k127_7637418_3 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005142 262.0
SYD3_k127_7637418_4 PFAM NAD-dependent epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001255 252.0
SYD3_k127_7637418_5 HPP family - - - 0.0000000000000000000000000000000000000000000000000000000000001202 218.0
SYD3_k127_7637418_6 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000332 194.0
SYD3_k127_7637418_7 Rieske [2Fe-2S] domain K02636 - 1.10.9.1 0.000000000000000000000000000000000000000000002342 174.0
SYD3_k127_7637418_8 - - - - 0.000000000000000000000421 105.0
SYD3_k127_7637418_9 integral membrane protein - - - 0.00000000004471 70.0
SYD3_k127_764623_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000472 514.0
SYD3_k127_764623_1 Rieske 2Fe-2S - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 468.0
SYD3_k127_764623_2 peptidase activity K01286 - 3.4.16.4 0.0000000000000000000000000000000005919 147.0
SYD3_k127_764623_3 Methylenetetrahydrofolate reductase - - - 0.000000000000000000000000000005319 121.0
SYD3_k127_764623_4 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000008766 136.0
SYD3_k127_7649211_0 Tetratricopeptide TPR_2 repeat protein - - - 3.099e-227 757.0
SYD3_k127_7649211_1 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005106 433.0
SYD3_k127_7649211_10 - - - - 0.0000000000000000000000001539 119.0
SYD3_k127_7649211_11 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000008229 107.0
SYD3_k127_7649211_12 PFAM Colicin V production K03558 - - 0.000000002433 64.0
SYD3_k127_7649211_13 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.00000002713 57.0
SYD3_k127_7649211_2 Belongs to the LarC family K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007306 351.0
SYD3_k127_7649211_3 (AIR) carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007444 254.0
SYD3_k127_7649211_4 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002548 248.0
SYD3_k127_7649211_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000007899 194.0
SYD3_k127_7649211_6 iron dependent repressor K03709 - - 0.0000000000000000000000000000000000000000000001432 176.0
SYD3_k127_7649211_7 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.000000000000000000000000000000000000002204 153.0
SYD3_k127_7649211_8 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000004158 150.0
SYD3_k127_7649211_9 PAP2 superfamily - - - 0.0000000000000000000000000000000005667 142.0
SYD3_k127_7724283_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00030 - 1.1.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 578.0
SYD3_k127_7724283_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 551.0
SYD3_k127_7724283_10 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009805 300.0
SYD3_k127_7724283_11 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004625 281.0
SYD3_k127_7724283_12 Von Willebrand factor type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003715 276.0
SYD3_k127_7724283_13 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000793 279.0
SYD3_k127_7724283_14 TIGRFAM phosphate ABC transporter K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007111 257.0
SYD3_k127_7724283_15 Hydrolyase, tartrate beta subunit fumarate domain protein, Fe-S type K01678 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000003507 230.0
SYD3_k127_7724283_16 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000004952 222.0
SYD3_k127_7724283_17 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000001982 214.0
SYD3_k127_7724283_18 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.0000000000000000000000000000000000000000000000000000001233 202.0
SYD3_k127_7724283_19 Belongs to the peptidase S1C family - - - 0.000000000000000000000000000000000000000000000000000245 194.0
SYD3_k127_7724283_2 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 456.0
SYD3_k127_7724283_20 oxidation-reduction process K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000000000002039 186.0
SYD3_k127_7724283_21 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity K06188 - - 0.000000000000000000000000000000000000000000000000003092 195.0
SYD3_k127_7724283_22 Cupin - - - 0.0000000000000000000000000000000000000000001125 164.0
SYD3_k127_7724283_23 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.00000000000000000000000000000000000000004742 166.0
SYD3_k127_7724283_24 nitrite transmembrane transporter activity K02575,K08223 - - 0.00000000000000000000000000000000000000005357 167.0
SYD3_k127_7724283_25 TIGRFAM TIGR00725 family protein K06966 - 3.2.2.10 0.0000000000000000000000000000000000000006101 155.0
SYD3_k127_7724283_26 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000316 141.0
SYD3_k127_7724283_27 PFAM transferase hexapeptide repeat containing protein - - - 0.0000000000000000000000000006919 118.0
SYD3_k127_7724283_28 Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K12368,K15580 - - 0.00000000000000000000002754 116.0
SYD3_k127_7724283_29 May reduce aminoacrylate peracid to aminoacrylate. Required to remove a toxic intermediate produce by the pyrimidine nitrogen degradation K09021 - - 0.00000000000001466 81.0
SYD3_k127_7724283_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003071 360.0
SYD3_k127_7724283_30 Copper binding proteins, plastocyanin/azurin family - - - 0.00003424 53.0
SYD3_k127_7724283_31 Arabinose efflux permease - - - 0.00003921 56.0
SYD3_k127_7724283_4 TIGRFAM phosphate ABC transporter, phosphate-binding protein K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 361.0
SYD3_k127_7724283_5 Phage integrase, N-terminal SAM-like domain K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009404 340.0
SYD3_k127_7724283_6 Belongs to the LDH MDH superfamily. LDH family K00016,K00024 - 1.1.1.27,1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002851 329.0
SYD3_k127_7724283_7 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 316.0
SYD3_k127_7724283_8 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 315.0
SYD3_k127_7724283_9 hydro-lyase, Fe-S type, tartrate fumarate subfamily, alpha subunit K01677 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004709 312.0
SYD3_k127_7737125_0 Rieske 2Fe-2S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006613 537.0
SYD3_k127_7737125_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K21577 - 1.21.4.2,1.21.4.3,1.21.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003881 472.0
SYD3_k127_7737125_10 PFAM glycine reductase complex selenoprotein A K10670 - 1.21.4.2,1.21.4.3,1.21.4.4 0.0000000000000000000000000000001717 126.0
SYD3_k127_7737125_11 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000533 122.0
SYD3_k127_7737125_12 translation initiation factor activity - - - 0.0000000000000000000000000001537 119.0
SYD3_k127_7737125_13 FMN binding - - - 0.000000000000000000001155 100.0
SYD3_k127_7737125_14 - - - - 0.000000000000000000004196 99.0
SYD3_k127_7737125_15 Selenoprotein B, glycine betaine sarcosine D-proline reductase family K10672 - 1.21.4.2 0.0000000000000002153 81.0
SYD3_k127_7737125_16 In the first step of glycine, betaine and sarcosine reductases, the substrate is bound to component PB via a Schiff base intermediate. Then the PB-activated substrate is nucleophilically attacked by the selenol anion of component PA to transform it to a carboxymethylated selenoether and the respective amine. By action of component PC, acetyl phosphate is formed, leaving component PA in its oxidized state. Finally component PA becomes reduced by the thioredoxin system to start a new catalytic cycle of reductive deamination K10670 - 1.21.4.2,1.21.4.3,1.21.4.4 0.0000000000005864 70.0
SYD3_k127_7737125_17 Animal haem peroxidase - - - 0.00000000004286 63.0
SYD3_k127_7737125_18 Glutaredoxin - - - 0.000009945 52.0
SYD3_k127_7737125_2 Belongs to the amidase family K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004055 447.0
SYD3_k127_7737125_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 413.0
SYD3_k127_7737125_4 Selenoprotein B, glycine betaine sarcosine D-proline reductase family K10672 - 1.21.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 341.0
SYD3_k127_7737125_5 COGs COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.000000000000000000000000000000000000000000000000000000000000000000002086 254.0
SYD3_k127_7737125_6 Glycine/sarcosine/betaine reductase component B subunits K10671 - 1.21.4.2 0.000000000000000000000000000000000000000000000000006867 197.0
SYD3_k127_7737125_7 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000000001739 195.0
SYD3_k127_7737125_8 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000001892 155.0
SYD3_k127_7737125_9 Esterase - - - 0.000000000000000000000000000000000008247 148.0
SYD3_k127_77670_0 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003944 549.0
SYD3_k127_77670_1 Putative modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 533.0
SYD3_k127_77670_10 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059,K19550 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0016628,GO:0016999,GO:0017000,GO:0017144,GO:0036094,GO:0044237,GO:0044249,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000002806 235.0
SYD3_k127_77670_11 SOS response associated peptidase (SRAP) - - - 0.0000000000000000000000000000000000000000000000000001567 194.0
SYD3_k127_77670_12 NIPSNAP - - - 0.00000000000000000000000000000002469 128.0
SYD3_k127_77670_13 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K00528 - 1.18.1.2,1.19.1.1 0.00000000000296 77.0
SYD3_k127_77670_14 Protein of unknown function (DUF1706) - - - 0.000008595 55.0
SYD3_k127_77670_15 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.0001268 44.0
SYD3_k127_77670_2 DNA primase, small subunit K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008055 518.0
SYD3_k127_77670_3 Methionine synthase K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007206 428.0
SYD3_k127_77670_4 ATP dependent DNA ligase C terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002422 407.0
SYD3_k127_77670_5 TIGRFAM luciferase family oxidoreductase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004747 357.0
SYD3_k127_77670_6 Enoyl-CoA hydratase isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004885 360.0
SYD3_k127_77670_7 catechol 1,2-dioxygenase K03381,K04098 - 1.13.11.1,1.13.11.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006413 287.0
SYD3_k127_77670_8 III protein, CoA-transferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009377 282.0
SYD3_k127_77670_9 Phosphotransferase K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000006545 266.0
SYD3_k127_7772351_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 572.0
SYD3_k127_7772351_1 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004523 497.0
SYD3_k127_7772351_2 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003301 391.0
SYD3_k127_7772351_3 PFAM NHL repeat containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 305.0
SYD3_k127_7772351_4 III protein, CoA-transferase family - - - 0.0000000000000000000000000000000000000000000000000000000663 200.0
SYD3_k127_7772351_5 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000001985 201.0
SYD3_k127_7772351_6 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.0000000000000000000000000000000000000000000000000001415 204.0
SYD3_k127_7772351_7 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006355,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016071,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0017148,GO:0019219,GO:0019222,GO:0019439,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0040008,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0045892,GO:0045926,GO:0045927,GO:0045934,GO:0046483,GO:0046700,GO:0048518,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000006961 127.0
SYD3_k127_7772351_8 PFAM Transposase IS200 like K07491 - - 0.000001561 59.0
SYD3_k127_7772351_9 addiction module antidote protein, CC2985 family - - - 0.00004901 49.0
SYD3_k127_7860585_0 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004188 329.0
SYD3_k127_7860585_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 298.0
SYD3_k127_7860585_10 transcriptional regulator - - - 0.0000000000006334 76.0
SYD3_k127_7860585_11 Cupin domain - - - 0.000000000584 70.0
SYD3_k127_7860585_2 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000002582 235.0
SYD3_k127_7860585_3 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000002948 218.0
SYD3_k127_7860585_4 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000001648 147.0
SYD3_k127_7860585_5 Methyltransferase domain - - - 0.00000000000000000000000000000000001881 147.0
SYD3_k127_7860585_6 amine dehydrogenase activity - - - 0.0000000000000000000000000000000001328 142.0
SYD3_k127_7860585_7 - - - - 0.0000000000000000000000000586 113.0
SYD3_k127_7860585_8 thiosulfate sulfurtransferase activity - - - 0.000000000000005631 78.0
SYD3_k127_7860585_9 negative regulation of transcription, DNA-templated K21600 - - 0.0000000000003049 79.0
SYD3_k127_8068181_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 411.0
SYD3_k127_8068181_1 glycosyl transferase group 1 K08256 - 2.4.1.345 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 313.0
SYD3_k127_8068181_2 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K05555 - - 0.000000000000000000000000000000000000000000000001704 185.0
SYD3_k127_8068181_4 SMART phosphoesterase PHP domain protein - - - 0.00000000000000000000000000000000000000001064 164.0
SYD3_k127_8068181_5 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000001621 140.0
SYD3_k127_8068181_6 alkyl hydroperoxide reductase activity - - - 0.00000000000000000000000000001567 133.0
SYD3_k127_8068181_7 Peptidase MA superfamily - - - 0.00000000000000000000002523 114.0
SYD3_k127_8068181_8 - - - - 0.0000002365 61.0
SYD3_k127_8173494_0 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004067 536.0
SYD3_k127_8173494_1 Belongs to the mandelate racemase muconate lactonizing enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 411.0
SYD3_k127_8173494_10 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000002749 135.0
SYD3_k127_8173494_11 F420H(2)-dependent quinone reductase - - - 0.00000000000000000000000000114 120.0
SYD3_k127_8173494_12 ABC transporter, substrate-binding protein, family 5 K02035 - - 0.000000000000000000000000005782 127.0
SYD3_k127_8173494_13 stress protein (general stress protein 26) - - - 0.0000000000000000000000001886 121.0
SYD3_k127_8173494_14 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000004221 108.0
SYD3_k127_8173494_15 Methylmuconolactone methyl-isomerase - - - 0.000000000000000000003131 105.0
SYD3_k127_8173494_16 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000009723 101.0
SYD3_k127_8173494_17 - - - - 0.00000000000001282 81.0
SYD3_k127_8173494_18 Glycosyltransferase like family 2 - - - 0.0002416 44.0
SYD3_k127_8173494_2 CoA-transferase family III K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 306.0
SYD3_k127_8173494_3 F420-dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 292.0
SYD3_k127_8173494_4 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004048 272.0
SYD3_k127_8173494_5 mandelate racemase muconate lactonizing K20023 - 4.2.1.156,4.2.1.42 0.00000000000000000000000000000000000000000000000000000000000000000008016 244.0
SYD3_k127_8173494_6 Catalyzes the NAD( )-dependent oxidative deamination of L-alanine to pyruvate, and the reverse reaction, the reductive amination of pyruvate K01750,K19244 - 1.4.1.1,4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000007455 234.0
SYD3_k127_8173494_7 Belongs to the enoyl-CoA hydratase isomerase family K01692,K18383 - 4.1.2.41,4.2.1.101,4.2.1.17 0.000000000000000000000000000000000000000000005257 174.0
SYD3_k127_8173494_8 Transcriptional regulator - - - 0.0000000000000000000000000000000000008459 150.0
SYD3_k127_8173494_9 Sigma-70 region 3 K02405 - - 0.0000000000000000000000000000000001243 142.0
SYD3_k127_8257584_0 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006068 415.0
SYD3_k127_8257584_1 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 347.0
SYD3_k127_8257584_2 3-carboxyethylcatechol 2,3-dioxygenase activity K05713 - 1.13.11.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001395 284.0
SYD3_k127_8257584_3 helix_turn_helix multiple antibiotic resistance protein K15973 - - 0.00000000000002068 81.0
SYD3_k127_8295998_0 PspA/IM30 family K03969 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001047 258.0
SYD3_k127_8295998_1 MOSC domain - - - 0.000000000000000000000000000000000000000000000000000004714 196.0
SYD3_k127_8295998_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000002985 203.0
SYD3_k127_8295998_3 - - - - 0.000000000000000000000000000000000000000000005586 180.0
SYD3_k127_8295998_4 Bacterial transcriptional activator domain - - - 0.00000000000000000000000000000000000004176 153.0
SYD3_k127_8295998_5 Sortase family - - - 0.0000000000001667 83.0
SYD3_k127_8295998_7 Protein of unknown function (DUF1059) - - - 0.00000023 55.0
SYD3_k127_8324515_0 Belongs to the aldehyde dehydrogenase family K13821 - 1.2.1.88,1.5.5.2 1.422e-261 837.0
SYD3_k127_8324515_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 417.0
SYD3_k127_8324515_10 - - - - 0.00000000004487 65.0
SYD3_k127_8324515_11 regulatory protein, FmdB family - - - 0.000000001309 62.0
SYD3_k127_8324515_12 - - - - 0.0000000815 54.0
SYD3_k127_8324515_13 YbbR-like protein - - - 0.0000001214 60.0
SYD3_k127_8324515_2 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 GO:0003674,GO:0003824,GO:0004367,GO:0006072,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0019637,GO:0044237,GO:0046167,GO:0052646,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901576 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004458 279.0
SYD3_k127_8324515_3 E-Z type HEAT repeats - - - 0.00000000000000000000000000000000000000000004475 172.0
SYD3_k127_8324515_4 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000001087 154.0
SYD3_k127_8324515_5 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000978 141.0
SYD3_k127_8324515_6 nUDIX hydrolase K01515,K03574,K19710 - 2.7.7.53,3.6.1.13,3.6.1.55 0.00000000000000000000000000000008562 130.0
SYD3_k127_8324515_7 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.0000000000000000000001944 110.0
SYD3_k127_8324515_9 Uncharacterized conserved protein (DUF2277) - - - 0.000000000000002274 79.0
SYD3_k127_832784_0 Belongs to the RtcB family K14415,K18148 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009291 579.0
SYD3_k127_832784_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008265 600.0
SYD3_k127_832784_10 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.00000000000009381 78.0
SYD3_k127_832784_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 589.0
SYD3_k127_832784_3 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 426.0
SYD3_k127_832784_4 translation release factor activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005343 317.0
SYD3_k127_832784_5 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000004513 274.0
SYD3_k127_832784_6 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000003299 173.0
SYD3_k127_832784_7 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.00000000000000000000000000000000000000000008865 177.0
SYD3_k127_832784_8 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000001511 163.0
SYD3_k127_8389633_0 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 539.0
SYD3_k127_8389633_1 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342,K05575 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004377 440.0
SYD3_k127_8389633_10 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000004908 107.0
SYD3_k127_8389633_11 electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon- concentration K05576 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000003076 106.0
SYD3_k127_8389633_12 4Fe-4S dicluster domain K00338,K05580 - 1.6.5.3 0.0000000001615 65.0
SYD3_k127_8389633_2 antiporter K00341,K05565 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 423.0
SYD3_k127_8389633_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 344.0
SYD3_k127_8389633_4 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000008292 256.0
SYD3_k127_8389633_5 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.0000000000000000000000000000000000000000000000005345 185.0
SYD3_k127_8389633_6 PFAM Chorismate mutase of the AroH class K06208 - 5.4.99.5 0.000000000000000000000000000000000000000001375 161.0
SYD3_k127_8389633_7 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000005726 145.0
SYD3_k127_8389633_8 Had-superfamily hydrolase, subfamily ia, variant 1 K07025,K08723 - 3.1.3.5 0.000000000000000000000000000001112 132.0
SYD3_k127_8389633_9 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339,K05578 - 1.6.5.3 0.00000000000000000000000000002101 126.0
SYD3_k127_8404093_0 MacB-like periplasmic core domain K02004 - - 2.049e-200 664.0
SYD3_k127_8404093_1 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 437.0
SYD3_k127_8404093_10 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000001632 181.0
SYD3_k127_8404093_11 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000064 175.0
SYD3_k127_8404093_12 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000667 172.0
SYD3_k127_8404093_13 ABC transporter substrate-binding protein K02035 - - 0.0000000000000000000000000000000000003726 160.0
SYD3_k127_8404093_14 DeoR-like helix-turn-helix domain - - - 0.00000000000000000000000000000000001942 144.0
SYD3_k127_8404093_15 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding - - - 0.00000000000000000000000000007103 121.0
SYD3_k127_8404093_16 ABC-type dipeptide transport system periplasmic component - - - 0.000000000000000000000006144 118.0
SYD3_k127_8404093_17 PFAM Methyltransferase type K15256 - - 0.000000000000000000007758 102.0
SYD3_k127_8404093_18 Transcriptional regulatory protein, C terminal - - - 0.000000000000006383 79.0
SYD3_k127_8404093_19 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000008896 83.0
SYD3_k127_8404093_2 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 445.0
SYD3_k127_8404093_20 virulence factor MVIN family protein K03980 - - 0.000000005035 63.0
SYD3_k127_8404093_21 Sortase family - - - 0.0000001339 64.0
SYD3_k127_8404093_22 FR47-like protein K03789 - 2.3.1.128 0.000006179 55.0
SYD3_k127_8404093_23 membrane protein (DUF2078) K08982 - - 0.0003761 47.0
SYD3_k127_8404093_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 338.0
SYD3_k127_8404093_4 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009083 325.0
SYD3_k127_8404093_5 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 307.0
SYD3_k127_8404093_6 NADH pyrophosphatase-like rudimentary NUDIX domain K03426 - 3.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000001842 267.0
SYD3_k127_8404093_7 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781 - 5.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000001449 266.0
SYD3_k127_8404093_8 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000303 184.0
SYD3_k127_8404093_9 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively K01243 - 3.2.2.9 0.000000000000000000000000000000000000000000000001087 189.0
SYD3_k127_8461686_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 8.293e-226 708.0
SYD3_k127_8461686_1 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 546.0
SYD3_k127_8461686_10 TadE-like protein - - - 0.00000000000004372 81.0
SYD3_k127_8461686_11 peptidase C60 sortase A and B - - - 0.00001414 56.0
SYD3_k127_8461686_2 Ammonium Transporter Family K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007557 521.0
SYD3_k127_8461686_3 Helix-hairpin-helix class 2 (Pol1 family) motifs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000551 352.0
SYD3_k127_8461686_4 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000001234 153.0
SYD3_k127_8461686_5 Belongs to the P(II) protein family K04751,K04752 - - 0.000000000000000000000000000000003381 131.0
SYD3_k127_8461686_6 Yqey-like protein K09117 - - 0.0000000000000000000000000002468 121.0
SYD3_k127_8461686_7 Putative Flp pilus-assembly TadE/G-like - - - 0.00000000000000000000000001381 126.0
SYD3_k127_8461686_8 Ribosomal protein S21 K02970 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000002917 83.0
SYD3_k127_8461686_9 Sortase family - - - 0.00000000000001141 83.0
SYD3_k127_8535962_0 histidyl-tRNA aminoacylation K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 458.0
SYD3_k127_8535962_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004277 420.0
SYD3_k127_8535962_2 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493,K07320 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009007,GO:0009008,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0032775,GO:0034641,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044728,GO:0046483,GO:0071704,GO:0090304,GO:0140096,GO:0140097,GO:1901360,GO:1901564 2.1.1.297,2.1.1.298 0.000000000000000000000000000000000000000000000000000000000000001544 231.0
SYD3_k127_8535962_3 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.0000000000000000000000000000004169 138.0
SYD3_k127_8535962_4 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.000000000000000000000000000007774 123.0
SYD3_k127_8535962_5 Reverse transcriptase-like K02226,K22316 GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005488,GO:0006139,GO:0006401,GO:0006725,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016891,GO:0016893,GO:0017144,GO:0018130,GO:0019438,GO:0019439,GO:0032296,GO:0033013,GO:0033014,GO:0034641,GO:0034655,GO:0042364,GO:0042578,GO:0043170,GO:0043755,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046700,GO:0051186,GO:0051188,GO:0071667,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 3.1.26.4,3.1.3.73 0.0000000000000000000000003861 112.0
SYD3_k127_8535962_6 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000002158 67.0
SYD3_k127_8571073_0 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K13019 - 5.1.3.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 406.0
SYD3_k127_8571073_1 aromatic amino acid beta-eliminating lyase threonine aldolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 365.0
SYD3_k127_8571073_2 Bacterial transferase hexapeptide - - - 0.0000000000000000000000000000000000000000000001091 175.0
SYD3_k127_8571073_3 TIGRFAM RNA polymerase sigma factor, FliA WhiG family K02405 - - 0.00000000000000000000000000000000000000007924 160.0
SYD3_k127_8571073_4 PAP2 superfamily - - - 0.00000000000000000000000000000000005582 143.0
SYD3_k127_8571073_5 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000007002 130.0
SYD3_k127_8571073_6 - - - - 0.0000000000000000000000000000766 116.0
SYD3_k127_8571073_7 dipeptide transport K02035 - - 0.00000000000000008947 94.0
SYD3_k127_8594546_0 Acyl transferase domain K15314 - - 0.0 1194.0
SYD3_k127_8594546_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 1.774e-236 744.0
SYD3_k127_8594546_10 AMP-binding enzyme K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002189 290.0
SYD3_k127_8594546_11 Zn-dependent alcohol dehydrogenases K00121 - 1.1.1.1,1.1.1.284 0.00000000000000000000000000000000000000000000000000000000000000000000000000000346 273.0
SYD3_k127_8594546_12 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000001972 222.0
SYD3_k127_8594546_13 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000538 222.0
SYD3_k127_8594546_14 Esterase PHB depolymerase - - - 0.0000000000000000000000000000000000000000000000000000000000692 216.0
SYD3_k127_8594546_15 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000002017 216.0
SYD3_k127_8594546_16 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000000000001522 204.0
SYD3_k127_8594546_17 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000005976 205.0
SYD3_k127_8594546_18 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000000001261 210.0
SYD3_k127_8594546_19 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000005471 205.0
SYD3_k127_8594546_2 carboxylase, biotin carboxylase K01961,K01965,K01968,K11263 - 6.3.4.14,6.4.1.2,6.4.1.3,6.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 527.0
SYD3_k127_8594546_20 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000004298 207.0
SYD3_k127_8594546_21 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000001583 199.0
SYD3_k127_8594546_22 Phosphotransferase enzyme family K00897 - 2.7.1.95 0.000000000000000000000000000000000000000000000000004424 199.0
SYD3_k127_8594546_23 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000001364 184.0
SYD3_k127_8594546_24 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000007595 162.0
SYD3_k127_8594546_25 PFAM SNARE associated Golgi protein K03975 - - 0.000000000000004151 85.0
SYD3_k127_8594546_26 PFAM regulatory protein LuxR - - - 0.00000000000001576 84.0
SYD3_k127_8594546_27 Protein conserved in bacteria - - - 0.0000000000002676 81.0
SYD3_k127_8594546_28 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000001965 71.0
SYD3_k127_8594546_29 Oxaloacetate decarboxylase alpha subunit K01960 - 6.4.1.1 0.0000000002873 68.0
SYD3_k127_8594546_3 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 503.0
SYD3_k127_8594546_30 acyl carrier - - - 0.000000001124 63.0
SYD3_k127_8594546_31 COG0346 Lactoylglutathione lyase and related lyases - - - 0.000000002074 66.0
SYD3_k127_8594546_33 Protein of unknown function (DUF1569) - - - 0.0005426 49.0
SYD3_k127_8594546_4 Tryptophan halogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000374 517.0
SYD3_k127_8594546_5 AMP-binding enzyme K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009326 465.0
SYD3_k127_8594546_6 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035597,GO:0035600,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050497,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:0090304,GO:1901360 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 442.0
SYD3_k127_8594546_7 Rieske [2Fe-2S] domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 388.0
SYD3_k127_8594546_8 PFAM glycosyl transferase group 1 K15521 - 2.4.1.250 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 361.0
SYD3_k127_8594546_9 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002793 279.0
SYD3_k127_8595966_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate - - - 0.0 1064.0
SYD3_k127_8595966_1 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 3.151e-261 825.0
SYD3_k127_8595966_10 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000001195 235.0
SYD3_k127_8595966_11 Endonuclease V K05982 - 3.1.21.7 0.000000000000000000000000000000000000000000000000000000000000000003099 236.0
SYD3_k127_8595966_12 2-phosphosulpholactate phosphatase K05979 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 3.1.3.71 0.000000000000000000000000000000000000000000000000000000002264 209.0
SYD3_k127_8595966_13 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000009736 209.0
SYD3_k127_8595966_14 PFAM Translin K07477 - - 0.000000000000000000000000000000000000000000000000000005375 202.0
SYD3_k127_8595966_15 Capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000000000000000000000000000000000002307 201.0
SYD3_k127_8595966_16 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000008917 200.0
SYD3_k127_8595966_17 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000004075 198.0
SYD3_k127_8595966_18 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000005925 159.0
SYD3_k127_8595966_19 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000001616 128.0
SYD3_k127_8595966_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.678e-236 747.0
SYD3_k127_8595966_20 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000001941 106.0
SYD3_k127_8595966_21 Putative regulatory protein - - - 0.00000000000000000000003436 104.0
SYD3_k127_8595966_22 PFAM Leucine Rich Repeat - - - 0.000000002889 70.0
SYD3_k127_8595966_23 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.0000001273 63.0
SYD3_k127_8595966_3 Methionine synthase K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005223 327.0
SYD3_k127_8595966_4 Methionine synthase K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001126 290.0
SYD3_k127_8595966_5 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003811 285.0
SYD3_k127_8595966_6 SMP-30 Gluconolaconase LRE domain protein K01053 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003994 280.0
SYD3_k127_8595966_7 Methionine synthase K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000007797 241.0
SYD3_k127_8595966_8 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000000009199 237.0
SYD3_k127_8595966_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001027 239.0
SYD3_k127_8675984_0 PFAM ABC transporter transmembrane region K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005514 570.0
SYD3_k127_8675984_1 ABC transporter, transmembrane region K06147,K18890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 539.0
SYD3_k127_8675984_10 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0070180,GO:0071704,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 - 0.000000000000000000000000000000000000000000000219 171.0
SYD3_k127_8675984_11 TIGRFAM ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000000000000000000000000000734 167.0
SYD3_k127_8675984_12 hydrolase - - - 0.000000000000000000000000000000000001455 146.0
SYD3_k127_8675984_13 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000003076 146.0
SYD3_k127_8675984_14 TIGRFAM 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.00000000000000000000000000000157 127.0
SYD3_k127_8675984_15 Mannose-6-phosphate isomerase - - - 0.000000000000000000000000129 112.0
SYD3_k127_8675984_16 Trm112p-like protein - - - 0.000000000000000001138 95.0
SYD3_k127_8675984_17 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000113 79.0
SYD3_k127_8675984_18 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000005769 48.0
SYD3_k127_8675984_19 Polyketide cyclase / dehydrase and lipid transport - - - 0.0003282 49.0
SYD3_k127_8675984_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004356 529.0
SYD3_k127_8675984_3 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01835,K01840 - 5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005432 525.0
SYD3_k127_8675984_4 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005782 304.0
SYD3_k127_8675984_5 dihydropteroate synthase K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008559 287.0
SYD3_k127_8675984_6 F420-dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003584 262.0
SYD3_k127_8675984_7 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000001152 228.0
SYD3_k127_8675984_8 Putative cyclase K07130 - 3.5.1.9 0.00000000000000000000000000000000000000000000000005181 186.0
SYD3_k127_8675984_9 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000004918 185.0
SYD3_k127_87398_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004714 420.0
SYD3_k127_87398_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009787 370.0
SYD3_k127_87398_10 SPTR D1C1B9 DinB family protein - - - 0.0000000000000008701 85.0
SYD3_k127_87398_2 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004861 364.0
SYD3_k127_87398_3 serine acetyltransferase K00640 GO:0000096,GO:0000097,GO:0000098,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009001,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009070,GO:0009087,GO:0009987,GO:0016053,GO:0016054,GO:0016407,GO:0016412,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000001065 239.0
SYD3_k127_87398_4 DsrE/DsrF/DrsH-like family - - - 0.00000000000000000000000000000000000000000001563 171.0
SYD3_k127_87398_5 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K00332 - 1.6.5.3 0.000000000000000000000000000004761 129.0
SYD3_k127_87398_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000000000000007886 122.0
SYD3_k127_87398_7 iron dependent repressor - - - 0.0000000000000000000000000009218 121.0
SYD3_k127_87398_8 PFAM Integrase core domain - - - 0.000000000000000000000003773 115.0
SYD3_k127_87398_9 Belongs to the sulfur carrier protein TusA family - - - 0.0000000000000000000253 93.0
SYD3_k127_8750892_0 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007013 569.0
SYD3_k127_8750892_1 Phage tail sheath C-terminal domain K06907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006903 461.0
SYD3_k127_8750892_2 Protein of unknown function (DUF4255) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002282 263.0
SYD3_k127_8750892_3 T4-like virus tail tube protein gp19 - - - 0.00000000000000000000000000000000000000000000000000000000000000000004637 233.0
SYD3_k127_8750892_4 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000003632 190.0
SYD3_k127_8750892_5 - - - - 0.0000000000000000000000000000000000000000000001985 169.0
SYD3_k127_8750892_6 Peptidoglycan-binding domain 1 protein - - - 0.000000000000002035 91.0
SYD3_k127_8750892_7 RHS Repeat - - - 0.00000000000001069 89.0
SYD3_k127_8750892_8 - - - - 0.000000001761 67.0
SYD3_k127_8750892_9 - - - - 0.000005543 54.0
SYD3_k127_8762_0 Belongs to the formate--tetrahydrofolate ligase family K01938 GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.3 2.235e-219 693.0
SYD3_k127_8762_1 acr, cog1565 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005517 559.0
SYD3_k127_8762_10 acetyltransferase - GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004576 318.0
SYD3_k127_8762_11 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008991 287.0
SYD3_k127_8762_12 NmrA-like family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000007543 265.0
SYD3_k127_8762_13 nitronate monooxygenase activity K02371 - 1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000005898 259.0
SYD3_k127_8762_14 Methionine synthase K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000002348 243.0
SYD3_k127_8762_15 Methylene-tetrahydrofolate reductase C terminal - - - 0.0000000000000000000000000000000000000000000000000000000003799 207.0
SYD3_k127_8762_16 Involved in DNA repair and RecF pathway recombination K03584 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000001617 204.0
SYD3_k127_8762_17 PucR C-terminal helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000002846 210.0
SYD3_k127_8762_18 WD40-like Beta Propeller Repeat K03641 - - 0.00000000000000000000000001062 123.0
SYD3_k127_8762_19 PFAM Glyoxalase bleomycin resistance protein dioxygenase K07104 - 1.13.11.2 0.00000000000000000000000465 108.0
SYD3_k127_8762_2 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 524.0
SYD3_k127_8762_20 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000003446 104.0
SYD3_k127_8762_21 Dodecin K09165 - - 0.00000000000000000001257 95.0
SYD3_k127_8762_22 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.00000000000005296 81.0
SYD3_k127_8762_23 FAD linked oxidases, C-terminal domain K11472 - - 0.0000000004583 68.0
SYD3_k127_8762_24 Putative regulatory protein - - - 0.000000727 57.0
SYD3_k127_8762_25 PRC-barrel domain - - - 0.000001976 58.0
SYD3_k127_8762_3 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 531.0
SYD3_k127_8762_4 8-amino-7-oxononanoate synthase activity K00639,K00652 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.3.1.29,2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005768 442.0
SYD3_k127_8762_5 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 440.0
SYD3_k127_8762_6 4Fe-4S dicluster domain K11473 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 409.0
SYD3_k127_8762_7 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004787 378.0
SYD3_k127_8762_8 AAA domain K07028 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004844 370.0
SYD3_k127_8762_9 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008165 339.0
SYD3_k127_8819061_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1194.0
SYD3_k127_8819061_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 1.997e-289 912.0
SYD3_k127_8819061_10 PFAM secretion protein HlyD family protein K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000647 244.0
SYD3_k127_8819061_11 PFAM SMP-30 Gluconolaconase LRE-like region K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000003602 223.0
SYD3_k127_8819061_12 alcohol dehydrogenase K13953 - 1.1.1.1 0.000000000000000000000000000000000000000005623 162.0
SYD3_k127_8819061_13 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.0000000000000000000000000000002141 128.0
SYD3_k127_8819061_14 Involved in the tonB-independent uptake of proteins K03641 - - 0.000000000000000000000001132 117.0
SYD3_k127_8819061_15 PFAM DinB family protein - - - 0.00000000000000000000003226 105.0
SYD3_k127_8819061_17 SnoaL-like domain - - - 0.0000000001273 68.0
SYD3_k127_8819061_19 - - - - 0.0001298 51.0
SYD3_k127_8819061_2 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 443.0
SYD3_k127_8819061_3 hydrolase, CocE NonD family K06978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 392.0
SYD3_k127_8819061_4 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004106 381.0
SYD3_k127_8819061_5 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008579 332.0
SYD3_k127_8819061_6 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005572 333.0
SYD3_k127_8819061_7 lipoprotein transporter activity K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 291.0
SYD3_k127_8819061_8 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000003876 236.0
SYD3_k127_8819061_9 Zinc-binding alcohol dehydrogenase family protein K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000002022 235.0
SYD3_k127_8961405_0 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 314.0
SYD3_k127_8961405_1 response regulator K07668,K07775 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002696 254.0
SYD3_k127_8961405_10 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000005182 106.0
SYD3_k127_8961405_11 radical SAM - - - 0.00000000000003703 85.0
SYD3_k127_8961405_13 COG2133 Glucose sorbosone dehydrogenases - - - 0.0000003494 61.0
SYD3_k127_8961405_14 dehydratase - - - 0.000002998 58.0
SYD3_k127_8961405_2 SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000006464 230.0
SYD3_k127_8961405_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000009652 225.0
SYD3_k127_8961405_4 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000001286 213.0
SYD3_k127_8961405_5 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity - - - 0.000000000000000000000000000000006085 138.0
SYD3_k127_8961405_6 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.000000000000000000000000000006822 128.0
SYD3_k127_8961405_7 Peptidoglycan-binding LysM - - - 0.000000000000000000000000002089 127.0
SYD3_k127_8961405_8 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.000000000000000000000005898 118.0
SYD3_k127_8961405_9 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000154 109.0
SYD3_k127_9222574_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1101.0
SYD3_k127_9222574_1 Belongs to the amidase family K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 407.0
SYD3_k127_9222574_10 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase - - - 0.0000000000000000000000000000000005567 136.0
SYD3_k127_9222574_11 Glyoxalase-like domain - - - 0.00000000000000000000000000000007866 137.0
SYD3_k127_9222574_12 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000003684 120.0
SYD3_k127_9222574_13 pyridoxamine 5-phosphate - - - 0.0000000000000000000000004455 109.0
SYD3_k127_9222574_14 Nitroreductase family - - - 0.00000000000000000768 89.0
SYD3_k127_9222574_15 Ribonuclease HI K02226,K22316 GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005488,GO:0006139,GO:0006401,GO:0006725,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016891,GO:0016893,GO:0017144,GO:0018130,GO:0019438,GO:0019439,GO:0032296,GO:0033013,GO:0033014,GO:0034641,GO:0034655,GO:0042364,GO:0042578,GO:0043170,GO:0043755,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046700,GO:0051186,GO:0051188,GO:0071667,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 3.1.26.4,3.1.3.73 0.00000000004715 71.0
SYD3_k127_9222574_2 Belongs to the arginase family K01480 - 3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 357.0
SYD3_k127_9222574_3 Methionine synthase K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 343.0
SYD3_k127_9222574_4 Transporter associated domain K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004212 294.0
SYD3_k127_9222574_5 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001757 281.0
SYD3_k127_9222574_6 Oxidoreductase molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003839 275.0
SYD3_k127_9222574_7 to Saccharomyces cerevisiae FOL2 (YGR267C) K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006066,GO:0006082,GO:0006575,GO:0006725,GO:0006729,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009110,GO:0009396,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0019752,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046394,GO:0046483,GO:0046655,GO:0046656,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000002095 246.0
SYD3_k127_9222574_8 TIGRFAM geranylgeranyl reductase - - - 0.0000000000000000000000000000000000000000000000000000000000003947 225.0
SYD3_k127_9222574_9 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000000000002789 148.0
SYD3_k127_9262257_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 1.579e-214 676.0
SYD3_k127_9262257_1 Rieske [2Fe-2S] domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 508.0
SYD3_k127_9262257_10 COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000002402 269.0
SYD3_k127_9262257_11 Major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004173 276.0
SYD3_k127_9262257_12 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000008717 270.0
SYD3_k127_9262257_13 acetyltransferase component of pyruvate dehydrogenase complex K00627,K00658 - 2.3.1.12,2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000003146 269.0
SYD3_k127_9262257_14 acyl-CoA dehydrogenase K22027 - 1.14.13.235 0.0000000000000000000000000000000000000000000000000000000000000000002743 249.0
SYD3_k127_9262257_15 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000001424 220.0
SYD3_k127_9262257_16 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000009796 211.0
SYD3_k127_9262257_17 MoaE protein K03635,K21142 - 2.8.1.12 0.000000000000000000000000000000000000000000000000000008523 196.0
SYD3_k127_9262257_18 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000005571 189.0
SYD3_k127_9262257_19 COG0720 6-pyruvoyl-tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000009247 164.0
SYD3_k127_9262257_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 492.0
SYD3_k127_9262257_20 Dehydrogenase - - - 0.0000000000000000000000000000000001954 139.0
SYD3_k127_9262257_21 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000009362 136.0
SYD3_k127_9262257_22 Probable zinc-ribbon domain - - - 0.000000000000000000000000000003053 125.0
SYD3_k127_9262257_23 - - GO:0008150,GO:0040008,GO:0045927,GO:0048518,GO:0050789,GO:0065007 - 0.0000000000000000005251 89.0
SYD3_k127_9262257_24 LppX_LprAFG lipoprotein K14954 - - 0.000000000000000002349 93.0
SYD3_k127_9262257_25 N-acetyltransferase - - - 0.0000000000000119 84.0
SYD3_k127_9262257_26 Glyoxalase-like domain K05606 - 5.1.99.1 0.0000003674 61.0
SYD3_k127_9262257_3 Transketolase, pyrimidine binding domain K21417 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 386.0
SYD3_k127_9262257_4 Dehydrogenase E1 component K21416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 353.0
SYD3_k127_9262257_5 acyl-CoA dehydrogenase K16047 - 1.14.14.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 327.0
SYD3_k127_9262257_6 3-carboxyethylcatechol 2,3-dioxygenase activity K05713 - 1.13.11.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 291.0
SYD3_k127_9262257_7 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006409 281.0
SYD3_k127_9262257_8 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001147 278.0
SYD3_k127_9262257_9 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007233 288.0
SYD3_k127_9272645_0 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000328 417.0
SYD3_k127_9272645_1 TAP-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008656 387.0
SYD3_k127_9272645_2 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004847 333.0
SYD3_k127_9272645_3 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000003297 210.0
SYD3_k127_9272645_4 ABC transporter substrate-binding protein K02035 - - 0.00000000000000000000000000000000000002239 164.0
SYD3_k127_9272645_5 ABC-type dipeptide transport system periplasmic component K02035 - - 0.000000000000000000000000000007137 137.0
SYD3_k127_9272645_6 CoA-transferase family III - - - 0.00006322 51.0
SYD3_k127_9296382_0 Peptidase family M20/M25/M40 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 322.0
SYD3_k127_9296382_1 Transcriptional regulator K05799 - - 0.00000000000000000000000000000000000002416 153.0
SYD3_k127_9296382_2 PFAM extracellular solute-binding protein, family 5 K02035,K12368,K13889 - - 0.000000000000000000000000000005285 137.0
SYD3_k127_9296382_3 - - - - 0.00000000000000000002194 102.0
SYD3_k127_9296382_4 von Willebrand factor (vWF) type A domain - - - 0.000000002674 60.0
SYD3_k127_941180_0 Male sterility protein K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006673 407.0
SYD3_k127_941180_1 ATPase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004755 383.0
SYD3_k127_941180_10 WxcM-like, C-terminal K01790 - 5.1.3.13 0.00000000000000000006549 97.0
SYD3_k127_941180_2 Methionine synthase K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004288 322.0
SYD3_k127_941180_3 Enoyl-(Acyl carrier protein) reductase K19548 - 1.1.1.385 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004985 302.0
SYD3_k127_941180_4 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005486 283.0
SYD3_k127_941180_5 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000002356 234.0
SYD3_k127_941180_6 epimerase dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000004421 221.0
SYD3_k127_941180_7 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000000000000000000000000005328 213.0
SYD3_k127_941180_8 Glycosyl transferase, family 2 K07011 - - 0.00000000000000000000000000000000000000001712 164.0
SYD3_k127_941180_9 alpha, beta - - - 0.000000000000000000000000000000001513 139.0
SYD3_k127_9536205_0 Glycosyl hydrolase family 26 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006567 434.0
SYD3_k127_9536205_1 Cellulose synthase K00694 - 2.4.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 392.0
SYD3_k127_9536205_2 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000191 259.0
SYD3_k127_9536205_3 beta-keto acid cleavage enzyme - - - 0.000000000000000000000000000000000000000000000000000000000001281 218.0
SYD3_k127_9536205_4 4-hydroxyphenylacetate 3-hydroxylase C terminal K00483 - 1.14.14.9 0.000000000000000000000000000000000000001239 166.0
SYD3_k127_9557169_0 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 371.0
SYD3_k127_9557169_1 FMN-dependent dehydrogenase K00104 - 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004714 361.0
SYD3_k127_9557169_2 Domain of unknown function (DUF1929) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007412 350.0
SYD3_k127_9557169_3 Rhodanese domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000005151 245.0
SYD3_k127_9557169_4 Cys/Met metabolism PLP-dependent enzyme K11325 - - 0.0000000000000000000000000000000000000000000000000000000000000002627 235.0
SYD3_k127_9557169_5 LGFP repeat - - - 0.0000000000000000000000000000000000000000000000000000000000001548 238.0
SYD3_k127_9557169_6 Dehydrogenase K00008 - 1.1.1.14 0.00000000000000000000000000000000003479 147.0
SYD3_k127_9557169_7 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000001605 124.0
SYD3_k127_9557169_8 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.000000000000000000003311 102.0
SYD3_k127_9557169_9 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000003817 69.0
SYD3_k127_9581265_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K13810 - 2.2.1.2,5.3.1.9 9.736e-228 735.0
SYD3_k127_9581265_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006507 532.0
SYD3_k127_9581265_10 PFAM Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 362.0
SYD3_k127_9581265_11 Methionine synthase K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004367 339.0
SYD3_k127_9581265_12 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases K00320 - 1.5.98.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 328.0
SYD3_k127_9581265_13 PFAM 6-phosphogluconate dehydrogenase domain protein K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 289.0
SYD3_k127_9581265_14 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000346 289.0
SYD3_k127_9581265_15 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001102 278.0
SYD3_k127_9581265_16 Acyl CoA acetate 3-ketoacid CoA transferase beta subunit K01032 - 2.8.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000007006 261.0
SYD3_k127_9581265_17 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001252 253.0
SYD3_k127_9581265_18 Coenzyme A transferase K01028 - 2.8.3.5 0.000000000000000000000000000000000000000000000000000000000000000001685 235.0
SYD3_k127_9581265_19 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000001533 219.0
SYD3_k127_9581265_2 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 513.0
SYD3_k127_9581265_20 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000001651 216.0
SYD3_k127_9581265_21 major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000002864 220.0
SYD3_k127_9581265_22 glyoxalase III activity - - - 0.00000000000000000000000000000000000000000000000000000005208 203.0
SYD3_k127_9581265_23 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781 - 5.1.2.2 0.000000000000000000000000000000000000000000000000000005175 205.0
SYD3_k127_9581265_24 - - - - 0.000000000000000000000000000000000000000000000000004218 199.0
SYD3_k127_9581265_25 N-terminal half of MaoC dehydratase - - - 0.000000000000000000000000000000000000000000000000699 179.0
SYD3_k127_9581265_26 PFAM Enoyl-CoA hydratase isomerase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000008072 185.0
SYD3_k127_9581265_27 membrane - - - 0.000000000000000000000000000000000000000001342 161.0
SYD3_k127_9581265_28 NAD(P)H-binding K01784 - 5.1.3.2 0.0000000000000000000000000000000000001175 159.0
SYD3_k127_9581265_29 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000007698 141.0
SYD3_k127_9581265_3 Rieske 2Fe-2S - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002634 512.0
SYD3_k127_9581265_30 PFAM Rieske 2Fe-2S domain K02636 - 1.10.9.1 0.00000000000000000000000001403 126.0
SYD3_k127_9581265_31 ABC transporter substrate-binding protein K02035 - - 0.00000000000000000000007256 114.0
SYD3_k127_9581265_32 Alpha beta hydrolase - - - 0.000000000000000000005542 104.0
SYD3_k127_9581265_33 Transcriptional regulator PadR-like family - - - 0.000000000000000000007518 97.0
SYD3_k127_9581265_34 Carboxymuconolactone decarboxylase family - - - 0.0000000000000002391 87.0
SYD3_k127_9581265_35 response regulator - - - 0.0000000000000002907 82.0
SYD3_k127_9581265_36 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000001379 88.0
SYD3_k127_9581265_37 Involved in the tonB-independent uptake of proteins - - - 0.00000000000001591 86.0
SYD3_k127_9581265_38 CAAX protease self-immunity K07052 - - 0.0000000000002442 81.0
SYD3_k127_9581265_39 helix_turn_helix, Lux Regulon - - - 0.000000000002001 78.0
SYD3_k127_9581265_4 Glucose inhibited division protein A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 452.0
SYD3_k127_9581265_40 ABC transporter substrate-binding protein K02035 - - 0.00000000000296 77.0
SYD3_k127_9581265_41 helix_turn_helix, Lux Regulon - - - 0.000000000002967 78.0
SYD3_k127_9581265_42 Transcriptional regulator K15973 GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.0000000001048 70.0
SYD3_k127_9581265_43 COG0747 ABC-type dipeptide transport system, periplasmic component K02035 - - 0.00000003938 64.0
SYD3_k127_9581265_44 COG3794 Plastocyanin - - - 0.000003333 59.0
SYD3_k127_9581265_45 Domain of unknown function (DUF4399) - - - 0.0000242 56.0
SYD3_k127_9581265_5 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 450.0
SYD3_k127_9581265_6 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005034 408.0
SYD3_k127_9581265_7 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005099 420.0
SYD3_k127_9581265_8 PFAM magnesium chelatase ChlI subunit K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008108 395.0
SYD3_k127_9581265_9 Methionine synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 381.0
SYD3_k127_9609862_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 7.328e-209 667.0
SYD3_k127_9609862_1 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 466.0
SYD3_k127_9609862_2 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001793 272.0
SYD3_k127_9609862_3 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001959 271.0
SYD3_k127_9616046_0 peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 526.0
SYD3_k127_9616046_1 PFAM glycosyl transferase family 20 K00697 - 2.4.1.15,2.4.1.347 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004928 364.0
SYD3_k127_9616046_10 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000007061 72.0
SYD3_k127_9616046_11 EamA-like transporter family K03298 - - 0.0002093 49.0
SYD3_k127_9616046_2 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005207 337.0
SYD3_k127_9616046_3 AMP-binding enzyme K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000001095 274.0
SYD3_k127_9616046_4 Ion channel K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000147 256.0
SYD3_k127_9616046_5 Sodium/calcium exchanger protein K07301 - - 0.00000000000000000000000000000000000000000000000000005438 201.0
SYD3_k127_9616046_6 Protein of unknown function (DUF998) - - - 0.00000000000000000000000000000000000000000006841 178.0
SYD3_k127_9616046_7 Amidohydrolase - - - 0.00000000000000000000000001963 112.0
SYD3_k127_9616046_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000001162 96.0
SYD3_k127_9616046_9 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000001182 101.0
SYD3_k127_9657531_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 563.0
SYD3_k127_9657531_1 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs K00375 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 495.0
SYD3_k127_9657531_2 AAA ATPase, central domain protein K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007233 461.0
SYD3_k127_9657531_3 endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000001338 175.0
SYD3_k127_9672376_0 Penicillin-binding Protein dimerisation domain K03587,K08384 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008144,GO:0008150,GO:0008658,GO:0008955,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0031224,GO:0031226,GO:0031406,GO:0032153,GO:0033218,GO:0033293,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:1901363,GO:1901681 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005156 379.0
SYD3_k127_9672376_1 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 343.0
SYD3_k127_9672376_2 Mur ligase family, catalytic domain K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003567 341.0
SYD3_k127_9672376_3 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 319.0
SYD3_k127_9672376_4 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004456 313.0
SYD3_k127_9672376_5 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000001702 244.0
SYD3_k127_9672376_6 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000004193 255.0
SYD3_k127_9672376_7 - - - - 0.00001996 51.0
SYD3_k127_9799256_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1046.0
SYD3_k127_9799256_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 525.0
SYD3_k127_9799256_2 ATPase associated with various cellular activities, AAA_3 K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 398.0
SYD3_k127_9799256_3 L-carnitine dehydratase bile acid-inducible protein F - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 355.0
SYD3_k127_9799256_4 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005991 325.0
SYD3_k127_9799256_5 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007241 296.0
SYD3_k127_9799256_6 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000001491 234.0
SYD3_k127_9801375_0 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 549.0
SYD3_k127_9801375_1 - - - - 0.000000000000000000001293 104.0
SYD3_k127_9801375_2 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000001159 91.0
SYD3_k127_9801375_3 G5 domain protein - - - 0.0000000000000000254 95.0
SYD3_k127_9801375_4 PFAM Peptidase family M23 - - - 0.00000000000000519 87.0
SYD3_k127_9801375_5 cellulose binding K13735 - - 0.0004938 53.0
SYD3_k127_9828591_0 Phage portal protein, SPP1 Gp6-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004278 484.0
SYD3_k127_9828591_1 acetyl-coa acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000385 410.0
SYD3_k127_9828591_10 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.0000000000000000000000000000007505 125.0
SYD3_k127_9828591_11 Glycoprotease family - - - 0.00000000000000000000000000000714 131.0
SYD3_k127_9828591_12 - - - - 0.00000000000006611 76.0
SYD3_k127_9828591_13 Transcription factor zinc-finger K09981 - - 0.00000000007568 68.0
SYD3_k127_9828591_14 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000001223 57.0
SYD3_k127_9828591_15 - - - - 0.0000009244 56.0
SYD3_k127_9828591_16 TIGRFAM DNA binding domain, excisionase family - - - 0.0002688 47.0
SYD3_k127_9828591_2 DNA packaging - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004938 403.0
SYD3_k127_9828591_3 PFAM Integral membrane protein TerC K05794 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007989 373.0
SYD3_k127_9828591_4 Pfam Cupin K00450,K11948 - 1.13.11.38,1.13.11.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001506 271.0
SYD3_k127_9828591_5 CoA-transferase family III K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000001774 264.0
SYD3_k127_9828591_6 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000004751 262.0
SYD3_k127_9828591_7 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000006071 259.0
SYD3_k127_9828591_8 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000002459 229.0
SYD3_k127_9828591_9 PFAM Uncharacterised protein family UPF0079, ATPase K06925 - - 0.0000000000000000000000000000000001877 140.0
SYD3_k127_9831530_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 497.0
SYD3_k127_9831530_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 504.0
SYD3_k127_9831530_10 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.00000000000000000000000000001888 120.0
SYD3_k127_9831530_11 Transcriptional regulator K13652 - - 0.000000000000000000009735 98.0
SYD3_k127_9831530_12 HEAT repeats - - - 0.00009621 53.0
SYD3_k127_9831530_13 PFAM regulatory protein AsnC Lrp family - - - 0.00009942 49.0
SYD3_k127_9831530_14 Methyltransferase domain - - - 0.0002915 49.0
SYD3_k127_9831530_2 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 428.0
SYD3_k127_9831530_3 AAA ATPase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 393.0
SYD3_k127_9831530_4 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001908 289.0
SYD3_k127_9831530_5 Methylenetetrahydrofolate reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002922 246.0
SYD3_k127_9831530_6 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000004763 187.0
SYD3_k127_9831530_7 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000003806 176.0
SYD3_k127_9831530_8 Carboxylesterase family - - - 0.00000000000000000000000000000000000000000001425 174.0
SYD3_k127_9831530_9 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000005071 158.0
SYD3_k127_9889067_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 522.0
SYD3_k127_9889067_1 IMP dehydrogenase / GMP reductase domain K00088 - 1.1.1.205 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003978 462.0
SYD3_k127_9889067_10 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.000000000001688 70.0
SYD3_k127_9889067_2 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 297.0
SYD3_k127_9889067_3 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000005801 242.0
SYD3_k127_9889067_4 PFAM Glyoxalase bleomycin resistance protein dioxygenase K11945 - - 0.000000000000000000000000000000000000000000000000000000000000000001331 241.0
SYD3_k127_9889067_5 Protein of unknown function (DUF1579) - - - 0.0000000000000000000000000000000000000000000408 168.0
SYD3_k127_9889067_6 Domain of unknown function (DUF4389) - - - 0.000000000000000000000000001536 120.0
SYD3_k127_9889067_7 Activator of hsp90 atpase 1 family protein - - - 0.000000000000000002182 89.0
SYD3_k127_9889067_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 - 1.13.11.2 0.00000000000000003563 88.0
SYD3_k127_9889067_9 Protein of unknown function (DUF1706) - - - 0.00000000000008173 79.0
SYD3_k127_9985098_0 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005136 409.0
SYD3_k127_9985098_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458,K14660 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 385.0
SYD3_k127_9985098_2 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000001277 258.0
SYD3_k127_9985098_3 PFAM sigma-70 region 2 domain protein K03088 - - 0.00000000000000000000000000000000000003154 152.0
SYD3_k127_9985098_4 PFAM MaoC like domain - - - 0.000000000000000000000009786 112.0
SYD3_k127_9985098_5 Thioesterase superfamily protein - - - 0.00000000000000000000003483 110.0
SYD3_k127_9985098_6 regulation of RNA biosynthetic process - - - 0.0000000000000000000001208 103.0
SYD3_k127_9985098_7 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000005688 83.0
SYD3_k127_9985098_8 Anti-sigma-K factor rskA - - - 0.0000000004828 71.0