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Overview

ID MAG04457
Name YHH1_bin.16
Sample SMP0121
Taxonomy
Kingdom Bacteria
Phylum Patescibacteriota
Class Patescibacteriia
Order CAIXNZ01
Family CAIXNZ01
Genus
Species
Assembly information
Completeness (%) 82.68
Contamination (%) 0.85
GC content (%) 35.0
N50 (bp) 7,163
Genome size (bp) 1,044,173

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes781

Gene name Description KEGG GOs EC E-value Score Sequence
YHH1_k127_10168983_0 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000001383 242.0
YHH1_k127_10168983_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000009803 183.0
YHH1_k127_10168983_2 SOS response associated peptidase (SRAP) - - - 0.0000000000000000000000000000000000000000000000001553 184.0
YHH1_k127_10261799_0 multi-organism process - - - 0.0000000711 58.0
YHH1_k127_10264010_0 Pyridine nucleotide-disulphide oxidoreductase K03387 - - 0.00000000000000000000000000000008477 128.0
YHH1_k127_10264010_1 domain, Protein - - - 0.00000000000000000000000004907 122.0
YHH1_k127_10269153_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000177 251.0
YHH1_k127_10269153_1 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00169 - 1.2.7.1 0.00000000000000000000000000000000000000003788 157.0
YHH1_k127_10269153_2 23S rRNA-intervening sequence protein - - - 0.000000000804 61.0
YHH1_k127_10269153_3 23S rRNA-intervening sequence protein - - - 0.00001072 49.0
YHH1_k127_10277606_0 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000001089 196.0
YHH1_k127_10277606_1 Putative glycosyl hydrolase domain - - - 0.0000000000000000000000002067 110.0
YHH1_k127_10325008_0 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000008956 231.0
YHH1_k127_10325008_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000658 220.0
YHH1_k127_10325008_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000001621 207.0
YHH1_k127_10325008_3 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000127 157.0
YHH1_k127_10325008_4 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000007957 128.0
YHH1_k127_10325008_5 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000009971 129.0
YHH1_k127_10325008_6 ribosomal protein l17 K02879 - - 0.000000000000000000000000000007999 121.0
YHH1_k127_10325008_7 Fumarase C C-terminus K01744 - 4.3.1.1 0.0000000000000000000001753 105.0
YHH1_k127_10325008_8 Glycosyltransferase Family 4 - - - 0.000000000000000002217 93.0
YHH1_k127_10325008_9 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000001191 69.0
YHH1_k127_1070271_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009642 439.0
YHH1_k127_1070271_1 membrane - - - 0.00000000000000000000000000000000000000000000000000000000009308 207.0
YHH1_k127_1070271_2 dTDP-4-dehydrorhamnose 3,5-epimerase activity K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000287 205.0
YHH1_k127_1070271_3 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.00000000000000000000000000000000004004 138.0
YHH1_k127_1070271_4 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000000000000000000000000003641 118.0
YHH1_k127_1070271_5 RF-1 domain K15034 - - 0.00000000000000000000000001983 113.0
YHH1_k127_1070271_6 PFAM Nitroreductase - - - 0.00000000000000000000004314 105.0
YHH1_k127_1070271_7 PFAM VanZ family protein - - - 0.0000000000000113 80.0
YHH1_k127_10779341_0 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000166 286.0
YHH1_k127_10779341_1 Belongs to the peptidase S51 family K05995 - 3.4.13.21 0.000000000000000000001056 102.0
YHH1_k127_10779341_2 Transposase IS200 like - - - 0.000000000000006771 77.0
YHH1_k127_10779341_3 - - - - 0.000842 46.0
YHH1_k127_10796660_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 403.0
YHH1_k127_10796660_1 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000161 233.0
YHH1_k127_10796660_2 - - - - 0.000000000000000005086 87.0
YHH1_k127_10796660_3 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.000000002461 68.0
YHH1_k127_10850_0 TIGRFAM anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 1.078e-304 947.0
YHH1_k127_10850_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006508 419.0
YHH1_k127_10850_10 Domain of unknown function (DUF4215) - - - 0.000000000005903 79.0
YHH1_k127_10850_11 TIGRFAM anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.000000001093 60.0
YHH1_k127_10850_12 guanyl-nucleotide exchange factor activity - - - 0.0000006465 63.0
YHH1_k127_10850_13 PFAM PKD domain containing protein - - - 0.000002571 61.0
YHH1_k127_10850_14 - - - - 0.0002561 53.0
YHH1_k127_10850_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 341.0
YHH1_k127_10850_3 TIGRFAM anaerobic ribonucleoside-triphosphate reductase activating protein K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000005215 219.0
YHH1_k127_10850_4 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000002505 164.0
YHH1_k127_10850_5 - - - - 0.00000000000000000000006735 115.0
YHH1_k127_10850_6 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000003958 102.0
YHH1_k127_10850_7 methylated-DNA-[protein]-cysteine S-methyltransferase activity K00567 - 2.1.1.63 0.000000000000006982 76.0
YHH1_k127_10850_8 this gene contains a nucleotide ambiguity which may be the result of a sequencing error - - - 0.0000000000004124 78.0
YHH1_k127_10850_9 Prokaryotic diacylglycerol kinase K00887,K00901 - 2.7.1.107,2.7.1.66 0.000000000004606 71.0
YHH1_k127_10921509_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006034 299.0
YHH1_k127_10921509_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000003519 224.0
YHH1_k127_10921509_2 Flavodoxin - - - 0.0000000000000000000000000614 112.0
YHH1_k127_10921509_3 glutaredoxin-like protein, YruB-family - - - 0.000000000000000000000001946 104.0
YHH1_k127_10961160_0 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000005409 187.0
YHH1_k127_10961160_1 Domain of unknown function (DUF389) - - - 0.0000000000000000000000000000001125 132.0
YHH1_k127_10961160_2 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000002692 111.0
YHH1_k127_1451121_0 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 350.0
YHH1_k127_1451121_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001538 286.0
YHH1_k127_1451121_2 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000002143 136.0
YHH1_k127_1451121_3 PFAM cytochrome c biogenesis protein, transmembrane region - - - 0.0000000000000000007902 96.0
YHH1_k127_1451121_4 Metallo-beta-lactamase superfamily - - - 0.00000006023 55.0
YHH1_k127_1527048_0 Single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 328.0
YHH1_k127_1527048_1 Glycosyl transferase, family 2 - - - 0.00000000000000000000000003387 113.0
YHH1_k127_1564984_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 333.0
YHH1_k127_1564984_1 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009267,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009987,GO:0009991,GO:0016036,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034641,GO:0034654,GO:0042594,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 291.0
YHH1_k127_1564984_2 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( K02823 - - 0.00000000000000000000000000000000000000000000009233 178.0
YHH1_k127_1564984_3 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000007782 119.0
YHH1_k127_1564984_4 Likely ribonuclease with RNase H fold. K07447 - - 0.000000000000000000000004222 106.0
YHH1_k127_1564984_5 PFAM Transposase K07491 - - 0.0000000000000000008653 89.0
YHH1_k127_1564984_6 Belongs to the pyrimidine 5'-nucleotidase family K01081 GO:0000215,GO:0000287,GO:0000288,GO:0000291,GO:0000956,GO:0002252,GO:0002376,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005829,GO:0006139,GO:0006152,GO:0006213,GO:0006401,GO:0006402,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0009056,GO:0009057,GO:0009058,GO:0009116,GO:0009119,GO:0009123,GO:0009125,GO:0009158,GO:0009161,GO:0009164,GO:0009605,GO:0009607,GO:0009615,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0012505,GO:0016070,GO:0016071,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0017144,GO:0018130,GO:0019222,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042278,GO:0042454,GO:0042578,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043928,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046085,GO:0046128,GO:0046130,GO:0046135,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0048519,GO:0050789,GO:0050896,GO:0051607,GO:0051704,GO:0051707,GO:0055086,GO:0060255,GO:0065007,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:0090304,GO:0098542,GO:0140098,GO:0140101,GO:1901068,GO:1901069,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.1.3.5 0.00000000000003191 74.0
YHH1_k127_1574062_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 3.381e-314 975.0
YHH1_k127_1574062_1 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000001256 195.0
YHH1_k127_1574062_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.00000000000000000000000000000000000000000000000003489 182.0
YHH1_k127_1574062_3 PFAM MazG nucleotide pyrophosphohydrolase - - - 0.0000000001507 66.0
YHH1_k127_1574062_4 Belongs to the ompA family K03286 - - 0.0001465 50.0
YHH1_k127_1607223_0 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K00554,K01770 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000005355 234.0
YHH1_k127_1607223_1 Transcriptional regulator, TrmB - - - 0.0000000000000000000000000007673 122.0
YHH1_k127_1607223_2 Belongs to the UPF0109 family K06960 - - 0.000000000000199 74.0
YHH1_k127_1607223_3 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000002365 76.0
YHH1_k127_1607223_4 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000004777 63.0
YHH1_k127_1607223_5 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.0000000008883 68.0
YHH1_k127_166690_0 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.000000000000000000000002957 112.0
YHH1_k127_166690_1 sigma-54 factor interaction domain-containing protein K02667 - - 0.000000005688 62.0
YHH1_k127_166690_2 Binds directly to 16S ribosomal RNA K02968 - - 0.00001355 51.0
YHH1_k127_166690_3 response regulator - - - 0.0006269 47.0
YHH1_k127_1681044_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006614 440.0
YHH1_k127_1768076_0 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000000000000000000000000006205 137.0
YHH1_k127_1848362_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000003096 228.0
YHH1_k127_1848362_1 CorA-like Mg2+ transporter protein K03284 - - 0.000000000000000000000000000000000000000000000000004435 192.0
YHH1_k127_19049_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001227 279.0
YHH1_k127_19049_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000001454 214.0
YHH1_k127_19049_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000001872 66.0
YHH1_k127_1920183_0 SMART von Willebrand factor, type A - - - 0.000000000000000000000000000001587 131.0
YHH1_k127_1920183_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000542 81.0
YHH1_k127_1920183_3 - - - - 0.0001256 53.0
YHH1_k127_1922577_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034335,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0046872,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363 5.99.1.3 7.769e-279 882.0
YHH1_k127_1922577_1 PFAM glutaredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 355.0
YHH1_k127_1922577_10 Transcriptional regulator, TrmB - - - 0.00000000000000000519 93.0
YHH1_k127_1922577_11 cyclopropane-fatty-acyl-phospholipid synthase K00568 - 2.1.1.222,2.1.1.64 0.000000000000001087 84.0
YHH1_k127_1922577_12 Protein of unknown function (DUF3307) - - - 0.000000000002724 74.0
YHH1_k127_1922577_13 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000001378 73.0
YHH1_k127_1922577_14 structural constituent of ribosome K02911 GO:0003674,GO:0003735,GO:0005198 - 0.000000003351 60.0
YHH1_k127_1922577_15 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17884 - 2.7.8.39 0.0000002715 60.0
YHH1_k127_1922577_16 Family of unknown function (DUF5320) - - - 0.00002792 49.0
YHH1_k127_1922577_17 cytokinin biosynthetic process K06966 - 3.2.2.10 0.00009971 50.0
YHH1_k127_1922577_2 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.0000000000000000000000000000000000000000000000005617 184.0
YHH1_k127_1922577_3 CYTH domain K05873 - 4.6.1.1 0.000000000000000000000000000000000000000000000064 175.0
YHH1_k127_1922577_4 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000653 162.0
YHH1_k127_1922577_5 Hydrolase, NUDIX family K03574,K17816 - 3.6.1.55,3.6.1.56 0.00000000000000000000000000000000307 133.0
YHH1_k127_1922577_6 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000003475 116.0
YHH1_k127_1922577_7 Belongs to the UPF0251 family K06933 - - 0.00000000000000000000000227 104.0
YHH1_k127_1922577_8 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000002264 102.0
YHH1_k127_1922577_9 Belongs to the CDS family - - - 0.0000000000000000000002625 104.0
YHH1_k127_1928367_0 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.000000000000000000000000000008807 129.0
YHH1_k127_2007457_0 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000000000000000000000001179 146.0
YHH1_k127_2007457_1 Diacylglycerol kinase catalytic domain (presumed) - - - 0.00000000000000000000001434 111.0
YHH1_k127_2007457_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000005085 96.0
YHH1_k127_2021690_0 General secretory system II, protein E domain protein K02652 - - 8.095e-233 733.0
YHH1_k127_2021690_1 ABC transporter substrate-binding component GldG K01992 - - 0.0000000000000000000000000000000005326 145.0
YHH1_k127_2021690_2 thermonuclease K01174 - 3.1.31.1 0.0000000000000000000000447 107.0
YHH1_k127_2043263_0 PFAM Integrase core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003874 319.0
YHH1_k127_2043263_1 DDE superfamily endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 303.0
YHH1_k127_2043263_2 AAA domain - - - 0.0000000000000000000000000000002748 124.0
YHH1_k127_2278501_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000004299 214.0
YHH1_k127_2278501_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000004483 147.0
YHH1_k127_2278501_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0002801 46.0
YHH1_k127_2298919_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 3.561e-205 651.0
YHH1_k127_2298919_1 PFAM aminotransferase class I and II K10907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004086 250.0
YHH1_k127_2298919_2 Prephenate dehydrogenase K00210 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000002 203.0
YHH1_k127_2298919_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000007696 106.0
YHH1_k127_2387155_0 PFAM glycosyl transferase, family 51 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007349 437.0
YHH1_k127_2387155_1 Belongs to the peptidase M20A family. ArgE subfamily K01438 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0008777,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0019752,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0046914,GO:0050897,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.1.16 0.00000000000000000000000000000000000000000000000000000006598 210.0
YHH1_k127_2387155_2 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000000000003413 180.0
YHH1_k127_2387155_3 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000001498 170.0
YHH1_k127_2387155_4 Sugar-specific transcriptional regulator TrmB - - - 0.000000000001242 77.0
YHH1_k127_2387155_5 acetyltransferase K00619 - 2.3.1.1 0.00002189 53.0
YHH1_k127_2387155_6 Two component transcriptional regulator, winged helix family K02483 - - 0.0009052 47.0
YHH1_k127_2489264_0 Membrane K04088,K14393,K17266 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 324.0
YHH1_k127_2489264_1 Efflux ABC transporter permease protein K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008964 301.0
YHH1_k127_2489264_2 ABC transporter K02003,K05685 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006297 244.0
YHH1_k127_2489264_3 Efflux ABC transporter permease protein K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007218 252.0
YHH1_k127_2489264_4 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000426 177.0
YHH1_k127_2489264_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993,K02005,K07798,K15727 - - 0.0000000000000000000000000000000000000008324 168.0
YHH1_k127_2489264_6 - - - - 0.0000002338 61.0
YHH1_k127_2532065_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 378.0
YHH1_k127_2532065_1 Belongs to the SEDS family K03588 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006598 297.0
YHH1_k127_2532065_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000001041 220.0
YHH1_k127_2532065_3 tRNA methylthiotransferase YqeV K18707 - 2.8.4.5 0.000000000000000000000000000008978 122.0
YHH1_k127_2532065_4 Domain of unknown function (DUF333) K14475 - - 0.00000000002676 74.0
YHH1_k127_2625945_0 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.000000000000000000000000000000000001057 145.0
YHH1_k127_2625945_1 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000002957 118.0
YHH1_k127_2625945_2 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000001014 55.0
YHH1_k127_2625945_3 GIY-YIG catalytic domain K07461 - - 0.000003884 52.0
YHH1_k127_2625945_4 Belongs to the peptidase S8 family - - - 0.000007893 57.0
YHH1_k127_2640298_0 Elongation factor G C-terminus K06207 GO:0000027,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006996,GO:0008150,GO:0009266,GO:0009408,GO:0009409,GO:0009628,GO:0009987,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071826,GO:0071840 - 3.519e-251 787.0
YHH1_k127_2640298_1 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 360.0
YHH1_k127_2640298_2 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000007057 229.0
YHH1_k127_2640298_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000003101 211.0
YHH1_k127_2640298_4 Endonuclease containing a URI domain K07461 - - 0.000000000000000000000002502 106.0
YHH1_k127_2640298_5 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000002511 64.0
YHH1_k127_2640298_6 Cell division cycle protein 27 homolog K03350 GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464 - 0.0003655 51.0
YHH1_k127_2654095_0 Cell division protein FtsA K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009904 413.0
YHH1_k127_2654095_1 Glycosyltransferase like family 2 K03606,K07011 - - 0.000000000000000000000000000000000000000000000000000000000001016 218.0
YHH1_k127_2654095_2 DNA polymerase III, delta subunit, C terminal K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000001415 178.0
YHH1_k127_2654095_3 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000004127 168.0
YHH1_k127_2654095_4 Protein of unknown function (DUF4012) - - - 0.0000000000000000000000000000000000000001625 172.0
YHH1_k127_2657624_0 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 - 5.2.1.8 0.000000001802 68.0
YHH1_k127_2664803_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000005486 185.0
YHH1_k127_2709123_0 DNA helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 460.0
YHH1_k127_2709123_1 COG NOG14600 non supervised orthologous group - - - 0.0000000000000000000000000126 109.0
YHH1_k127_2709123_2 Unextendable partial coding region - - - 0.00000000000000008395 81.0
YHH1_k127_2782624_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 477.0
YHH1_k127_2782624_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000249 231.0
YHH1_k127_2782624_2 Bifunctional purine biosynthesis protein PurH K00602 GO:0003674,GO:0003824,GO:0004643,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016740,GO:0016741,GO:0016742,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.2.3,3.5.4.10 0.00000001255 62.0
YHH1_k127_2823829_0 phosphopantothenoylcysteine decarboxylase activity K01598,K13038,K21977 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000003736 180.0
YHH1_k127_2823829_1 phosphopantothenoylcysteine decarboxylase activity K01598 GO:0003674,GO:0003824,GO:0004633,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.36 0.0000000000000000000000000000000000000000000001076 175.0
YHH1_k127_2823829_2 Amidohydrolase family K07045 - - 0.00000000000000000000002966 110.0
YHH1_k127_2823829_3 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000381 84.0
YHH1_k127_2823829_4 Transcriptional regulator, TrmB - - - 0.00000000001441 74.0
YHH1_k127_2827740_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 1.718e-241 762.0
YHH1_k127_286532_0 ABC-type Fe3 transport system permease component K02053,K02054,K02063 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003418 298.0
YHH1_k127_286532_1 ABC transporter K02010,K02017,K02052,K02062,K10112,K11072,K15497,K17240 - 3.6.3.29,3.6.3.30,3.6.3.31,3.6.3.55 0.000000000000000000000000000000000000000000000000000000000000000000000007702 256.0
YHH1_k127_286532_2 PFAM S23 ribosomal protein - - - 0.00000000000001215 78.0
YHH1_k127_286532_3 23S rRNA-intervening sequence protein - - - 0.0002708 49.0
YHH1_k127_2878464_0 TIGRFAM phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005803 570.0
YHH1_k127_2878464_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007448 419.0
YHH1_k127_2878464_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000003907 184.0
YHH1_k127_2878464_3 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.000000000000000000000000000000000000000000000001641 181.0
YHH1_k127_2878464_4 Domain of unknown function (DUF4337) - - - 0.0000000000000000000000000000000000001639 153.0
YHH1_k127_2878464_5 PFAM beta-lactamase domain protein - - - 0.00000000000000000000000000000005343 138.0
YHH1_k127_2878464_6 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000004616 107.0
YHH1_k127_2878464_7 Acylphosphatase K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.0000000000000000000001166 100.0
YHH1_k127_2934708_0 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007959 530.0
YHH1_k127_2934708_1 Peptide nickel ABC transporter, substrate-binding protein K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007655 313.0
YHH1_k127_2934708_2 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000002209 156.0
YHH1_k127_2934708_3 TIGRFAM pyruvate ketoisovalerate oxidoreductase, gamma subunit K00172 - 1.2.7.1 0.000000000000000000000000000000000007631 139.0
YHH1_k127_2934708_4 Preprotein translocase SecG subunit K03075 - - 0.0000000003295 63.0
YHH1_k127_2943042_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 316.0
YHH1_k127_2943042_1 - - - - 0.000000000000000000000007135 108.0
YHH1_k127_2943042_2 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000001073 85.0
YHH1_k127_2943042_3 Cell wall formation K00075 - 1.3.1.98 0.00000003393 57.0
YHH1_k127_2943042_4 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K00557,K03215 GO:0000049,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016740,GO:0016741,GO:0019843,GO:0030488,GO:0030696,GO:0030697,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901363 2.1.1.190,2.1.1.35 0.00001077 50.0
YHH1_k127_2943042_5 Aminoglycoside-2''-adenylyltransferase K19545 - - 0.0008986 51.0
YHH1_k127_2945816_0 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000002976 224.0
YHH1_k127_2945816_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.0000000000000001894 81.0
YHH1_k127_2945816_2 pfkB family carbohydrate kinase - - - 0.000000005254 61.0
YHH1_k127_2977417_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 6.261e-222 708.0
YHH1_k127_2977417_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 476.0
YHH1_k127_2977417_2 DNA recombination-mediator protein A K03168,K04096 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004795 301.0
YHH1_k127_2977417_3 Trypsin - - - 0.0000002214 63.0
YHH1_k127_2989500_0 Bacterial regulatory proteins, crp family - - - 0.00000000000000000000001617 104.0
YHH1_k127_2989500_1 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000326 96.0
YHH1_k127_2989500_2 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.00000000000000000000338 106.0
YHH1_k127_2989500_3 Prokaryotic N-terminal methylation motif K02456 - - 0.0000003718 58.0
YHH1_k127_3093733_0 Fic/DOC family N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 559.0
YHH1_k127_3093733_1 Mazg nucleotide pyrophosphohydrolase - - - 0.0006697 45.0
YHH1_k127_3132341_0 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000004351 210.0
YHH1_k127_3132341_1 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000001516 146.0
YHH1_k127_3132341_2 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000000000000002249 146.0
YHH1_k127_3132341_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000008473 143.0
YHH1_k127_3132341_4 Translin-associated protein X - - - 0.00000000000000000000000000000000003913 141.0
YHH1_k127_3132341_5 O-methyltransferase - - - 0.0000000000000000000000004131 111.0
YHH1_k127_3132341_6 domain, Protein K09766 - - 0.00000006215 66.0
YHH1_k127_3132341_7 Histidine kinase - - - 0.0003282 49.0
YHH1_k127_3220248_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000745 488.0
YHH1_k127_3220248_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 440.0
YHH1_k127_3220248_2 Elongation factor P K02356 - - 0.0000000000000000000001054 99.0
YHH1_k127_3220248_3 Transglycosylase SLT domain - - - 0.0000001994 61.0
YHH1_k127_3220248_4 Helix-turn-helix domain - - - 0.000002449 57.0
YHH1_k127_3224504_0 BRO family, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004364 335.0
YHH1_k127_3224504_1 Domain of unknown function(DUF2779) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 323.0
YHH1_k127_3224504_2 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000002416 198.0
YHH1_k127_3224504_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.000003578 49.0
YHH1_k127_3274201_0 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 374.0
YHH1_k127_3274201_1 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001251 236.0
YHH1_k127_3274201_2 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000177 202.0
YHH1_k127_3274201_3 O-Antigen ligase K18814 - - 0.000004271 59.0
YHH1_k127_3274201_4 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.00002168 55.0
YHH1_k127_3274201_5 biosynthesis protein - - - 0.00009875 53.0
YHH1_k127_328912_0 Belongs to the peptidase M16 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001425 278.0
YHH1_k127_328912_1 Dodecin K09165 - - 0.000000000003088 69.0
YHH1_k127_3404926_0 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000002848 171.0
YHH1_k127_3404926_1 S23 ribosomal protein - - - 0.0000000000000000000000000001853 118.0
YHH1_k127_3404926_2 PFAM Nickel-dependent hydrogenase, large subunit K14126 - 1.8.98.5 0.00000000000000000000000001012 113.0
YHH1_k127_3404926_3 - - - - 0.000000000000003879 78.0
YHH1_k127_347538_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003643 317.0
YHH1_k127_347538_1 PolyA polymerase K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001973 286.0
YHH1_k127_347538_2 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000001562 214.0
YHH1_k127_347538_3 Poly A polymerase head domain K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000004165 212.0
YHH1_k127_347538_4 Cytidylate kinase-like family K15045 - - 0.0000000000000000000000003367 112.0
YHH1_k127_3482246_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 349.0
YHH1_k127_3482246_1 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000006437 226.0
YHH1_k127_3516410_0 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000004378 214.0
YHH1_k127_3516410_1 Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate K15024 - 2.3.1.8 0.000000000000000000000000000000000000000000000000003146 187.0
YHH1_k127_3516410_2 DUF3160 - - - 0.000000000005718 66.0
YHH1_k127_3516410_3 Metallo-beta-lactamase superfamily - - - 0.000000000262 65.0
YHH1_k127_3589327_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006533 550.0
YHH1_k127_3589327_1 Carbohydrate binding family 6 K01179 - 3.2.1.4 0.000000000002569 69.0
YHH1_k127_3718610_0 TIGRFAM YD repeat protein - - - 0.0000000000000000001131 101.0
YHH1_k127_3718610_1 leucine- rich repeat protein - - - 0.0000000001128 75.0
YHH1_k127_3718610_2 Alpha-L-rhamnosidase K05989 - 3.2.1.40 0.000002131 59.0
YHH1_k127_3718610_3 GGDEF domain - - - 0.0001792 48.0
YHH1_k127_3718610_4 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - 0.0003014 47.0
YHH1_k127_3757287_1 GIY-YIG catalytic domain K07461 - - 0.0000000000000000000000000007666 115.0
YHH1_k127_3757287_2 aminopeptidase - - - 0.0000000001117 73.0
YHH1_k127_3757287_3 methanogen marker protein 4 - - - 0.0000000004412 70.0
YHH1_k127_3757287_4 Has ATPase and non-specific DNA-binding activities K07456 - - 0.0000001597 63.0
YHH1_k127_3855042_0 nicotinamide-nucleotide amidase activity K03742,K03743 - 3.5.1.42 0.00000000000000000000000000000000006357 145.0
YHH1_k127_3855042_1 heme binding - - - 0.00000000000000000000000002812 111.0
YHH1_k127_3855042_2 3D domain protein - - - 0.00000008066 61.0
YHH1_k127_3855042_3 3D domain protein - - - 0.0000021 57.0
YHH1_k127_3903270_0 Belongs to the Nudix hydrolase family. NudJ subfamily K03574,K12152 GO:0003674,GO:0003824,GO:0004787,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017110,GO:0017111 3.6.1.55 0.00000000000000000004616 96.0
YHH1_k127_3904798_0 Inorganic H+ pyrophosphatase K15987 - 3.6.1.1 8.117e-287 894.0
YHH1_k127_3904798_1 Magnesium chelatase, subunit ChlI C-terminal K06400,K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 565.0
YHH1_k127_3904798_2 Peptidoglycan-binding LysM - - - 0.00000000000000000000000000000000000000000000001201 188.0
YHH1_k127_3904798_3 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000002031 153.0
YHH1_k127_3904798_4 Flavin reductase-like protein - - - 0.000000000000000000000000000004116 127.0
YHH1_k127_3904798_5 Transcriptional regulator, TrmB - - - 0.0000000000000001763 90.0
YHH1_k127_3904798_6 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000001216 74.0
YHH1_k127_3904798_7 TIGRFAM Sporulation protein YteA - - - 0.000000000008074 72.0
YHH1_k127_3904798_8 Belongs to the protein N5-glutamine methyltransferase family K07320 - 2.1.1.298 0.0000001292 63.0
YHH1_k127_3904798_9 Pfam Recombinase zinc beta ribbon domain - - - 0.0006812 52.0
YHH1_k127_3990735_0 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000005575 208.0
YHH1_k127_3990735_1 Glycosyl transferases group 1 - - - 0.0000000000000000000008614 99.0
YHH1_k127_3990735_2 TonB-dependent receptor, beta-barrel - - - 0.00003227 56.0
YHH1_k127_4028580_0 CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 304.0
YHH1_k127_4028580_1 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000009079 208.0
YHH1_k127_4028580_2 NADPH-dependent FMN reductase - - - 0.00000000000000000000000003183 115.0
YHH1_k127_4146439_0 Domain of unknown function (DUF4131) K02238 - - 0.0000000000000000000000000000000000000000000000000000007729 211.0
YHH1_k127_4146439_1 cell adhesion involved in biofilm formation - - - 0.0000000003951 73.0
YHH1_k127_4197888_0 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000001151 158.0
YHH1_k127_4197888_1 histidine kinase A domain protein - - - 0.000000000000000000001959 106.0
YHH1_k127_4330405_0 Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid K05946 - 2.4.1.187 0.000000000000000000000000000000000000000000000005776 188.0
YHH1_k127_4330405_1 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.0000000000000000000000000002454 123.0
YHH1_k127_4330405_2 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000009566 70.0
YHH1_k127_4330405_3 self proteolysis - - - 0.00000003348 63.0
YHH1_k127_4361706_0 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005899 416.0
YHH1_k127_4361706_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 333.0
YHH1_k127_4361706_2 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 289.0
YHH1_k127_4361706_3 Polysaccharide biosynthesis protein K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000004248 235.0
YHH1_k127_4361706_4 Transcriptional regulator, TrmB - - - 0.00000000000000000000000001282 119.0
YHH1_k127_4361706_5 Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine K18911 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006547,GO:0006548,GO:0006575,GO:0006577,GO:0006578,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008213,GO:0008276,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009987,GO:0016020,GO:0016053,GO:0016054,GO:0016740,GO:0016741,GO:0019439,GO:0019538,GO:0019752,GO:0032259,GO:0034641,GO:0036211,GO:0042398,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0044464,GO:0046394,GO:0046395,GO:0046483,GO:0046700,GO:0052698,GO:0052699,GO:0052701,GO:0052703,GO:0052704,GO:0052707,GO:0052708,GO:0052709,GO:0052803,GO:0052805,GO:0071704,GO:0071944,GO:0097164,GO:0140096,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 2.1.1.44 0.000000000002821 79.0
YHH1_k127_4487449_1 PFAM Major Facilitator Superfamily - - - 0.0002898 49.0
YHH1_k127_453137_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000009069 229.0
YHH1_k127_4598684_0 cell wall binding repeat - - - 0.00000000559 69.0
YHH1_k127_4598684_1 Bacterial protein of unknown function (DUF916) - - - 0.00001598 56.0
YHH1_k127_462004_0 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007477 374.0
YHH1_k127_462004_1 PFAM sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001579 280.0
YHH1_k127_462004_2 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000212 143.0
YHH1_k127_466893_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007473 366.0
YHH1_k127_466893_1 TIGRFAM periplasmic serine protease, Do DeqQ family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000002114 246.0
YHH1_k127_466893_2 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000004655 217.0
YHH1_k127_466893_3 involved in cell wall biogenesis - - - 0.0000000000000000000000000000000000000000000000000000001964 201.0
YHH1_k127_466893_4 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000001573 129.0
YHH1_k127_466893_5 Uncharacterized conserved protein (DUF2304) K09153 - - 0.0000000000000000000837 93.0
YHH1_k127_466893_6 von Willebrand factor, type A - - - 0.0001034 53.0
YHH1_k127_4690250_0 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 493.0
YHH1_k127_4690250_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000009637 174.0
YHH1_k127_4690250_2 - - - - 0.00000000000000000000000001935 113.0
YHH1_k127_4690250_3 HupF/HypC family K04653 - - 0.0000008214 53.0
YHH1_k127_4711186_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.00000000000000000000000000000000000001344 154.0
YHH1_k127_4711186_1 - - - - 0.00000000000000000000000000000001681 131.0
YHH1_k127_4711186_2 PFAM Pyruvate phosphate dikinase, PEP K01007 - 2.7.9.2 0.0000000000000000000000000009294 125.0
YHH1_k127_4711186_3 bis(5'-adenosyl)-triphosphatase activity - - - 0.0000000000000000000345 94.0
YHH1_k127_4717403_0 Belongs to the ClpA ClpB family K03696 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 627.0
YHH1_k127_4717403_1 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 292.0
YHH1_k127_4717403_2 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000002791 222.0
YHH1_k127_4717403_3 Tricorn protease homolog K08676 - - 0.0000768 55.0
YHH1_k127_4725230_0 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000007165 173.0
YHH1_k127_4725230_1 Stage II sporulation protein K06381 - - 0.0000000000000008006 91.0
YHH1_k127_4746387_0 MgsA AAA+ ATPase C terminal K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 482.0
YHH1_k127_4746387_1 DNA polymerase X family K02347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000577 487.0
YHH1_k127_4746387_2 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000000000001297 180.0
YHH1_k127_4746387_3 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.0000000000000000000000000001558 118.0
YHH1_k127_4874828_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 501.0
YHH1_k127_4874828_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 441.0
YHH1_k127_4874828_10 Tetratricopeptide repeats - - - 0.000002674 58.0
YHH1_k127_4874828_11 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin - - - 0.00004044 54.0
YHH1_k127_4874828_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035597,GO:0035600,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050497,GO:0071704,GO:0090304,GO:1901360 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 347.0
YHH1_k127_4874828_3 Thymidylate synthase K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000001333 254.0
YHH1_k127_4874828_4 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000001345 231.0
YHH1_k127_4874828_5 dUTP diphosphatase activity K01520,K13038 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0051259,GO:0051260,GO:0055086,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23,4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000001201 151.0
YHH1_k127_4874828_6 MafB19-like deaminase - - - 0.000000000000000000000000000001865 131.0
YHH1_k127_4874828_7 Cytidylyltransferase-like - - - 0.000000000000000000000003004 108.0
YHH1_k127_4874828_8 Thymidylate kinase K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000003078 78.0
YHH1_k127_4874828_9 HIT domain - - - 0.000000000005162 72.0
YHH1_k127_4926170_0 FemAB family K05363,K11693 - 2.3.2.10,2.3.2.16 0.00000000000000000000000000000000000000000009458 171.0
YHH1_k127_4926170_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000001762 145.0
YHH1_k127_4926170_2 Sugar-specific transcriptional regulator TrmB - - - 0.000000000000000006095 93.0
YHH1_k127_4926170_3 Protein of unknown function (DUF4012) - - - 0.0000000005827 70.0
YHH1_k127_4976566_0 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000156 206.0
YHH1_k127_4976566_1 Vault protein inter-alpha-trypsin domain K07114 - - 0.00000000000000000000000001009 127.0
YHH1_k127_4976566_2 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain - - - 0.000000003537 69.0
YHH1_k127_4997346_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.14 8.879e-217 680.0
YHH1_k127_4997346_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.14 3.098e-194 617.0
YHH1_k127_4997346_10 Transposase IS200 like - - - 0.0007587 49.0
YHH1_k127_4997346_2 rRNA (adenine-C2-)-methyltransferase activity K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004953 289.0
YHH1_k127_4997346_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000000000000000000000001116 213.0
YHH1_k127_4997346_4 Lipocalin-like domain - - - 0.000000000000000000000000000000000356 145.0
YHH1_k127_4997346_5 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000003515 107.0
YHH1_k127_4997346_6 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000001313 81.0
YHH1_k127_4997346_7 redox protein regulator of disulfide bond formation K06889,K07397 - - 0.00000000000000123 86.0
YHH1_k127_4997346_8 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000003706 81.0
YHH1_k127_4997346_9 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000002931 63.0
YHH1_k127_5160744_0 PFAM type II secretion system protein E K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 357.0
YHH1_k127_5160744_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 327.0
YHH1_k127_5160744_2 tRNA threonylcarbamoyladenosine modification K06925,K07102 - 2.7.1.221 0.0000000000000000000000005947 109.0
YHH1_k127_5160744_3 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000001217 57.0
YHH1_k127_5314605_0 glutamine synthetase K01915 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0044464,GO:0050001,GO:0071944 6.3.1.2 2.158e-210 661.0
YHH1_k127_5314605_1 response to antibiotic - - - 6.321e-210 679.0
YHH1_k127_5314605_2 Bacterial capsule synthesis protein PGA_cap K04101,K05713,K06990,K07282 - 1.13.11.16,1.13.11.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 408.0
YHH1_k127_5314605_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K01885,K02341,K02343 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0030337,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0042575,GO:0042802,GO:0043170,GO:0043846,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050790,GO:0061695,GO:0065007,GO:0065009,GO:0071704,GO:0090304,GO:0098772,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7,6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 353.0
YHH1_k127_5314605_4 helicase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008091 308.0
YHH1_k127_5314605_5 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.00000000000000005517 88.0
YHH1_k127_5346402_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000002132 233.0
YHH1_k127_5346402_1 Protein of unknown function (DUF3298) - - - 0.000000000001415 77.0
YHH1_k127_5404214_0 transferase activity, transferring glycosyl groups K00694,K01210 - 2.4.1.12,3.2.1.58 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 406.0
YHH1_k127_5404214_1 Belongs to the GPI family K01810 - 5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005159 350.0
YHH1_k127_5404214_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000211 221.0
YHH1_k127_5404214_3 bis(5'-adenosyl)-triphosphatase activity - - - 0.00000000000000000000000000000000000516 142.0
YHH1_k127_5404214_4 Protein of unknown function (DUF1003) - - - 0.0000000000000000000000005074 111.0
YHH1_k127_5404214_5 oligosaccharyl transferase activity - - - 0.00000000001981 72.0
YHH1_k127_5404214_7 - - - - 0.0002938 48.0
YHH1_k127_5404214_8 Beta-lactamase superfamily domain - - - 0.0004585 44.0
YHH1_k127_5414520_0 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 367.0
YHH1_k127_5414520_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 336.0
YHH1_k127_5414520_2 Transposase IS200 like - - - 0.0000000000000000000000000000000000002648 146.0
YHH1_k127_5414520_3 Protein of unknown function (DUF3467) - - - 0.000000000000000000002415 96.0
YHH1_k127_5414520_4 - - - - 0.00000000000000334 81.0
YHH1_k127_5414520_5 PFAM Methyl-viologen-reducing hydrogenase, delta subunit K22480 - 1.8.7.3 0.0005787 45.0
YHH1_k127_5483452_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 1.293e-196 621.0
YHH1_k127_5502893_0 protein with protein kinase and helix-hairpin-helix DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 517.0
YHH1_k127_5502893_1 COG1335 Amidases related to nicotinamidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009893 342.0
YHH1_k127_5502893_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001634 273.0
YHH1_k127_5502893_3 Isochorismatase family - - - 0.000000000000000000000000000000000000000000000000000000000008089 215.0
YHH1_k127_5502893_5 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000001846 78.0
YHH1_k127_5502893_6 COG1051 ADP-ribose pyrophosphatase K03574 - 3.6.1.55 0.000009839 48.0
YHH1_k127_5520472_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 451.0
YHH1_k127_5520472_1 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004458 325.0
YHH1_k127_5520472_2 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 316.0
YHH1_k127_5520472_3 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000137 251.0
YHH1_k127_5520472_4 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components K06147 GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009507,GO:0009526,GO:0009536,GO:0009555,GO:0009657,GO:0009658,GO:0009889,GO:0009941,GO:0009987,GO:0010035,GO:0010038,GO:0010288,GO:0010380,GO:0016020,GO:0016043,GO:0018130,GO:0019222,GO:0019538,GO:0019637,GO:0019720,GO:0019725,GO:0019866,GO:0022622,GO:0030003,GO:0031090,GO:0031323,GO:0031326,GO:0031966,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0042221,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046686,GO:0046916,GO:0048229,GO:0048364,GO:0048731,GO:0048856,GO:0048878,GO:0050789,GO:0050790,GO:0050794,GO:0050801,GO:0050896,GO:0051171,GO:0051186,GO:0051188,GO:0051189,GO:0051193,GO:0051276,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0065009,GO:0071704,GO:0071840,GO:0090056,GO:0090407,GO:0098771,GO:0099402,GO:1901360,GO:1901362,GO:1901401,GO:1901463,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000001747 195.0
YHH1_k127_5520472_5 Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation K09811 - - 0.00000000000000000000000004929 119.0
YHH1_k127_5520472_6 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000131 65.0
YHH1_k127_5535201_0 Bacterial trigger factor protein (TF) C-terminus K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000002565 240.0
YHH1_k127_5535201_1 COG0500 SAM-dependent methyltransferases - - - 0.000000000000000000000000000000000000000000000000000007369 198.0
YHH1_k127_5535201_2 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000006234 167.0
YHH1_k127_5535201_3 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.00000000000000000000000000000000004188 139.0
YHH1_k127_5535201_4 PFAM MgtC SapB transporter K07507 - - 0.000000000000000000000000000003016 124.0
YHH1_k127_5535201_5 self proteolysis - - - 0.0000000000000000000000008135 116.0
YHH1_k127_5535201_6 Conserved repeat domain - - - 0.0004327 53.0
YHH1_k127_5578031_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1201.0
YHH1_k127_5578031_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005694 377.0
YHH1_k127_5578031_2 Belongs to the peptidase S14 family - - - 0.0007289 49.0
YHH1_k127_570543_0 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000001047 207.0
YHH1_k127_570543_1 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000003246 205.0
YHH1_k127_570543_10 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000001651 66.0
YHH1_k127_570543_11 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.0000003972 54.0
YHH1_k127_570543_2 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.000000000000000000000000000000000000000000000000000003063 193.0
YHH1_k127_570543_3 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000005139 177.0
YHH1_k127_570543_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000001315 145.0
YHH1_k127_570543_5 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000002817 120.0
YHH1_k127_570543_6 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000000533 98.0
YHH1_k127_570543_7 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000007884 102.0
YHH1_k127_570543_8 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000001417 95.0
YHH1_k127_570543_9 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000005438 91.0
YHH1_k127_5783144_0 PFAM Transposase DDE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 307.0
YHH1_k127_5849837_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 366.0
YHH1_k127_5849837_1 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001131 285.0
YHH1_k127_5849837_2 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000001301 127.0
YHH1_k127_5849837_3 CoA-binding protein K06929 - - 0.000000000000000000000000001112 116.0
YHH1_k127_5858965_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006362 571.0
YHH1_k127_5858965_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005494 431.0
YHH1_k127_5858965_2 PFAM methylpurine-DNA glycosylase (MPG) K03652 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000001848 192.0
YHH1_k127_5858965_3 competence protein - - - 0.000000000000000000000000002571 120.0
YHH1_k127_5858965_4 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00007344 45.0
YHH1_k127_5913819_0 N-acetylmuramoyl-L-alanine amidase - - - 0.00000000000000000000000000000000000000282 167.0
YHH1_k127_5928264_0 peptidyl-tyrosine sulfation - - - 0.0000001102 63.0
YHH1_k127_5989390_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 546.0
YHH1_k127_5989390_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003233 449.0
YHH1_k127_5989390_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003559 433.0
YHH1_k127_5989390_3 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 329.0
YHH1_k127_5989390_4 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000005024 206.0
YHH1_k127_5989390_5 Uncharacterised protein family UPF0047 - - - 0.00001476 48.0
YHH1_k127_6077226_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000882 304.0
YHH1_k127_6077226_1 transcriptional - - - 0.00000004538 65.0
YHH1_k127_6077226_2 endonuclease containing a URI domain K07461 - - 0.0008282 42.0
YHH1_k127_6105779_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006523 616.0
YHH1_k127_6105779_1 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 469.0
YHH1_k127_6105779_2 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007347 256.0
YHH1_k127_6105779_3 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003315 242.0
YHH1_k127_6105779_4 PSP1 domain protein - - - 0.000000000000000000000000000000000000000000000121 177.0
YHH1_k127_6105779_5 Type IV leader peptidase family K02654 - 3.4.23.43 0.00000000000001337 79.0
YHH1_k127_6105779_6 Sigma 54 modulation protein / S30EA ribosomal protein K05808 - - 0.0000000006246 64.0
YHH1_k127_6263385_0 Psort location CytoplasmicMembrane, score K07991 - 3.4.23.52 0.0000007275 61.0
YHH1_k127_6263385_1 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00002729 53.0
YHH1_k127_6283492_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 403.0
YHH1_k127_6283492_1 Glutamine amidotransferase domain K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006447 326.0
YHH1_k127_6283492_2 cell division protein FtsQ K03589 - - 0.000005201 55.0
YHH1_k127_6299146_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 629.0
YHH1_k127_6299146_1 NYN domain - - - 0.0000000000000000000000000000000000000000000000000007114 188.0
YHH1_k127_6299146_2 Belongs to the 'phage' integrase family K04763 - - 0.000000000000000000000000000000000000000000000000004744 193.0
YHH1_k127_6299146_3 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000008414 95.0
YHH1_k127_6299146_4 Belongs to the multicopper oxidase YfiH RL5 family - - - 0.00000000000000000368 93.0
YHH1_k127_6299146_5 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000001013 87.0
YHH1_k127_6299146_6 Regulatory protein, FmdB family - - - 0.000001357 52.0
YHH1_k127_6304610_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 4.293e-303 949.0
YHH1_k127_6304610_1 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000000004034 126.0
YHH1_k127_6304610_2 chaperone-mediated protein folding - - - 0.000000000000000003442 95.0
YHH1_k127_6304610_3 PFAM Conserved TM helix repeat-containing protein - - - 0.000000000006395 70.0
YHH1_k127_6397467_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 422.0
YHH1_k127_6397467_1 YibE F family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001957 260.0
YHH1_k127_6397467_2 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000004822 239.0
YHH1_k127_6397467_3 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000004679 156.0
YHH1_k127_6397467_5 sequence-specific DNA binding - - - 0.00004314 50.0
YHH1_k127_6460173_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 317.0
YHH1_k127_6642839_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000002679 184.0
YHH1_k127_6642839_2 Serine/Threonine protein kinases, catalytic domain K08884,K12132 GO:0002237,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009847,GO:0009987,GO:0010033,GO:0010243,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0032494,GO:0032502,GO:0036211,GO:0042221,GO:0042834,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071224,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0071944,GO:0097367,GO:0140096,GO:1901564,GO:1901698,GO:1901699,GO:1901700,GO:1901701 2.7.11.1 0.00000000000000000000000582 111.0
YHH1_k127_6642839_3 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000008548 72.0
YHH1_k127_6642839_4 - - - - 0.000008841 57.0
YHH1_k127_6642839_5 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0006373 44.0
YHH1_k127_6707455_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001474 276.0
YHH1_k127_6707455_1 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.00000000000000000000000000271 128.0
YHH1_k127_6707455_2 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0000000000000000000000004448 121.0
YHH1_k127_6707455_3 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0000000000000000000000009774 119.0
YHH1_k127_6707455_4 GIY-YIG catalytic domain K07461 - - 0.000000000000000001726 86.0
YHH1_k127_6713543_0 Transposase IS200 like - - - 0.0000000000000000000000000000000000000000006015 163.0
YHH1_k127_6713543_1 COG1651 Protein-disulfide isomerase K21990 - - 0.00000000000000000000009969 106.0
YHH1_k127_6718463_0 positive regulation of ATPase activity K11089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 369.0
YHH1_k127_6718463_1 Transcriptional regulator, TrmB - - - 0.0000000000004941 79.0
YHH1_k127_677443_0 Belongs to the ClpA ClpB family K03696 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 410.0
YHH1_k127_677443_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004417 372.0
YHH1_k127_677443_2 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001288 283.0
YHH1_k127_677443_3 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.0000000000000000000000000000000000000000002178 162.0
YHH1_k127_677443_5 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000001157 74.0
YHH1_k127_677443_6 nucleotidyltransferase activity - - - 0.000000000323 68.0
YHH1_k127_677443_7 Glycoprotease family K14742 - - 0.00000001333 61.0
YHH1_k127_6797876_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003611 384.0
YHH1_k127_6797876_1 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000001476 102.0
YHH1_k127_6797876_2 binds to the 23S rRNA K02876 - - 0.0000000000000000000001778 104.0
YHH1_k127_6848961_0 UvrD/REP helicase N-terminal domain K03657,K07465 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 332.0
YHH1_k127_6848961_1 Transglutaminase-like superfamily - - - 0.0000001892 62.0
YHH1_k127_6853881_0 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 316.0
YHH1_k127_6853881_1 Transposase C of IS166 homeodomain K07484 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000407 327.0
YHH1_k127_6853881_2 IS66 Orf2 like protein - - - 0.0000000000000000000008498 99.0
YHH1_k127_6853881_3 protein of Escherichia coli O157 H7 - - - 0.000107 49.0
YHH1_k127_6860963_0 PFAM VanW family protein - - - 0.0000000000000000000000000000000000000000000000000000000000001045 236.0
YHH1_k127_6860963_1 threonine efflux protein - - - 0.0000000000000006862 79.0
YHH1_k127_6871143_0 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000001076 165.0
YHH1_k127_6871143_1 chaperone-mediated protein folding - - - 0.0000000000000000000000000002943 131.0
YHH1_k127_6871143_2 chaperone-mediated protein folding - - - 0.0000000000000000000001847 112.0
YHH1_k127_6871143_3 chaperone-mediated protein folding - - - 0.000000000000000000002488 109.0
YHH1_k127_6871143_4 Predicted membrane protein (DUF2079) - - - 0.0000000000000006535 92.0
YHH1_k127_6871143_5 oligosaccharyl transferase activity - - - 0.0000000000007102 81.0
YHH1_k127_6893074_0 Virulence protein RhuM family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 358.0
YHH1_k127_6897790_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 509.0
YHH1_k127_6897790_1 23S rRNA-intervening sequence protein - - - 0.00005575 51.0
YHH1_k127_6964678_0 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000002813 112.0
YHH1_k127_6964678_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000001949 100.0
YHH1_k127_6964678_2 23S rRNA-intervening sequence protein - - - 0.0000000000000000002668 93.0
YHH1_k127_6964678_3 PFAM YbaK prolyl-tRNA synthetase associated region K19055 - - 0.0000002031 60.0
YHH1_k127_6971329_0 DNA polymerase K02337,K14162 - 2.7.7.7 3.071e-278 895.0
YHH1_k127_6971329_1 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008511 569.0
YHH1_k127_6971329_2 Belongs to the ParB family K03497 GO:0005575,GO:0005622,GO:0005623,GO:0007059,GO:0008150,GO:0009295,GO:0009987,GO:0022603,GO:0042173,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0043937,GO:0043938,GO:0044424,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0065007 - 0.000000000000000000000000000000003048 140.0
YHH1_k127_7008618_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 391.0
YHH1_k127_7008618_1 CHAD - - - 0.0000000002363 68.0
YHH1_k127_7046903_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 550.0
YHH1_k127_7046903_1 FeS cluster assembly scaffold protein NifU K04488 - - 0.0000000000000000000000000000000000000000000969 163.0
YHH1_k127_7046903_2 Transcriptional regulator - - - 0.00000000000000000000000000002003 121.0
YHH1_k127_7046903_3 Binds to the 23S rRNA K02939 - - 0.000000000000000000000000006734 115.0
YHH1_k127_7046903_4 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 - 0.000000000000000000000003924 104.0
YHH1_k127_7046903_5 PFAM NifU-like domain - - - 0.0000000000000000000009833 96.0
YHH1_k127_7046903_6 Methyltransferase FkbM domain - - - 0.0000000000003588 79.0
YHH1_k127_7101128_0 Heat shock 70 kDa protein K04043 - - 2.157e-257 808.0
YHH1_k127_7101128_1 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000007955 133.0
YHH1_k127_7101128_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000006202 110.0
YHH1_k127_7149436_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 336.0
YHH1_k127_7149436_1 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000001461 223.0
YHH1_k127_7149436_2 PFAM Catalytic LigB subunit of aromatic ring-opening dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000001109 203.0
YHH1_k127_7149436_3 Extradiol ring-cleavage dioxygenase, class III K06990,K09141 - - 0.0000000000000000000000000000000000000000000000000238 184.0
YHH1_k127_7149436_4 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000003593 136.0
YHH1_k127_7149436_5 NYN domain - - - 0.00000004834 61.0
YHH1_k127_7217646_0 Flavin containing amine oxidoreductase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 468.0
YHH1_k127_7217646_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 284.0
YHH1_k127_7217646_2 - - - - 0.00000000000000000000000000000000000958 139.0
YHH1_k127_7217646_3 Protein of unknown function (DUF2834) - - - 0.00000000000000000001221 94.0
YHH1_k127_7217646_4 rhodopsin K04643 - - 0.00000001503 63.0
YHH1_k127_722059_0 PFAM zinc iron permease K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000127 226.0
YHH1_k127_722059_1 deoxyhypusine monooxygenase activity K01387 - 3.4.24.3 0.0000000000000001222 91.0
YHH1_k127_7248006_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 1.89e-211 670.0
YHH1_k127_7248006_1 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008027 272.0
YHH1_k127_726471_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 361.0
YHH1_k127_726471_1 exodeoxyribonuclease III K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003606 286.0
YHH1_k127_726471_2 phosphotransferase activity, for other substituted phosphate groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002 278.0
YHH1_k127_726471_3 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000001749 258.0
YHH1_k127_726471_4 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000006025 225.0
YHH1_k127_726471_5 L,D-transpeptidase catalytic domain - - - 0.0000000000000005606 87.0
YHH1_k127_7277250_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.523e-196 630.0
YHH1_k127_7277250_1 Sugar-specific transcriptional regulator TrmB - - - 0.00000000000000000000000000000000000000000000000002024 188.0
YHH1_k127_7474906_0 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 521.0
YHH1_k127_7474906_1 (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001322 233.0
YHH1_k127_7583162_0 Sodium/calcium exchanger protein K07301 - - 0.00000000000000000000000000000000000000000004011 167.0
YHH1_k127_7583162_1 AsnC family K03719 - - 0.00013 51.0
YHH1_k127_7592972_0 Belongs to the bacterial histone-like protein family K03530 - - 0.000000000000000000000002083 105.0
YHH1_k127_7592972_1 exonuclease of the beta-lactamase fold involved in RNA K07576 - - 0.000000000000000000003466 96.0
YHH1_k127_7592972_2 Esterase-like activity of phytase - - - 0.0000000735 66.0
YHH1_k127_7592972_3 Belongs to the UPF0109 family K06960 - - 0.000001232 53.0
YHH1_k127_7592972_4 lipolytic protein G-D-S-L family - - - 0.0008744 53.0
YHH1_k127_7806246_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 361.0
YHH1_k127_7806246_1 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.000000000000000000000000000000000000000000004238 175.0
YHH1_k127_7806246_2 Protein of unknown function (DUF3048) C-terminal domain - - - 0.00000000000000000000000000000000000000000001312 178.0
YHH1_k127_7806246_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000002634 120.0
YHH1_k127_7808968_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 355.0
YHH1_k127_7808968_1 Mechanosensitive ion channel K16052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001375 284.0
YHH1_k127_7808968_2 Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000000000000000000000000000001063 173.0
YHH1_k127_7808968_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000003229 77.0
YHH1_k127_7839391_0 helicase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006173 480.0
YHH1_k127_7839391_1 Transketolase, pyrimidine binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004675 356.0
YHH1_k127_7839391_2 COG0191 Fructose tagatose bisphosphate aldolase K01624,K08302 - 4.1.2.13,4.1.2.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 344.0
YHH1_k127_7839391_3 Dehydrogenase E1 component K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004667 316.0
YHH1_k127_7839391_4 ribose 5-phosphate isomerase B K01808 - 5.3.1.6 0.0000000000000000000000000000000001109 137.0
YHH1_k127_7839391_5 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000001622 128.0
YHH1_k127_7839391_6 Ferredoxin thioredoxin reductase catalytic beta chain - - - 0.000000000001693 72.0
YHH1_k127_7839391_7 Phosphomethylpyrimidine kinase - - - 0.000005188 57.0
YHH1_k127_7839391_8 Probable zinc-ribbon domain - - - 0.00007081 56.0
YHH1_k127_7839391_9 Rubredoxin - - - 0.0002345 49.0
YHH1_k127_7929159_0 Elongator protein 3, MiaB family, Radical SAM K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007563 400.0
YHH1_k127_7929159_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000002586 262.0
YHH1_k127_7929159_2 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.00000000000000000000000000000000001781 150.0
YHH1_k127_7929159_3 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008104,GO:0008150,GO:0009966,GO:0010646,GO:0010738,GO:0023051,GO:0033036,GO:0034237,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051018,GO:0051179,GO:0065007,GO:1902531 3.1.4.58 0.000000000000000000000009416 108.0
YHH1_k127_7929159_4 self proteolysis - - - 0.000000000001691 73.0
YHH1_k127_7929159_5 HELICc2 K10844 - 3.6.4.12 0.000000001684 71.0
YHH1_k127_8040805_0 Permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002612 388.0
YHH1_k127_8040805_1 Cytochrome C biogenesis protein transmembrane region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001253 246.0
YHH1_k127_8040805_10 regulatory protein, arsR K03892 - - 0.000000003505 64.0
YHH1_k127_8040805_11 - - - - 0.0000006089 62.0
YHH1_k127_8040805_12 - - - - 0.00001191 54.0
YHH1_k127_8040805_2 Glycosyl hydrolase family 57 - - - 0.0000000000000000000000000000000002803 143.0
YHH1_k127_8040805_3 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000003298 99.0
YHH1_k127_8040805_4 redox-active disulfide protein 2 - - - 0.000000000000000000139 90.0
YHH1_k127_8040805_5 - - - - 0.000000000000000005648 94.0
YHH1_k127_8040805_6 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.00000000000000001329 87.0
YHH1_k127_8040805_7 - - - - 0.00000000000000001649 88.0
YHH1_k127_8040805_8 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.00000000000008652 78.0
YHH1_k127_8040805_9 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000002731 76.0
YHH1_k127_8066097_0 3-beta hydroxysteroid dehydrogenase/isomerase family K08678 - 4.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000004318 261.0
YHH1_k127_8066097_1 Glycosyltransferase like family K07011 - - 0.000000000000000000000000000000000000000000000000000000002215 213.0
YHH1_k127_8066097_2 GtrA-like protein - - - 0.000000000008427 71.0
YHH1_k127_8066097_3 Belongs to the peptidase S8 family - - - 0.000000001583 68.0
YHH1_k127_813820_0 tRNA binding K01885,K09698 - 6.1.1.17,6.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000622 387.0
YHH1_k127_813820_1 PFAM Peptidase M23 K21471 - - 0.000000000000000000000000000125 130.0
YHH1_k127_814595_0 Type IV secretory pathway, VirB4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005051 374.0
YHH1_k127_8221751_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 464.0
YHH1_k127_8221751_1 RmlD substrate binding domain K01784,K02473,K03274,K08678 - 4.1.1.35,5.1.3.2,5.1.3.20,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000004641 269.0
YHH1_k127_8221751_2 Polysaccharide biosynthesis protein - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000001284 225.0
YHH1_k127_8225861_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 2.647e-218 708.0
YHH1_k127_8225861_1 Biotin carboxylase - - - 0.00000000000000000000005085 113.0
YHH1_k127_8225861_2 23S rRNA-intervening sequence protein - - - 0.000000000000000000418 90.0
YHH1_k127_8225861_3 Sugar-specific transcriptional regulator TrmB - - - 0.0000000000000000007361 95.0
YHH1_k127_8225861_4 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000002264 91.0
YHH1_k127_8225861_5 Transcriptional regulator, TrmB - - - 0.00000004878 65.0
YHH1_k127_8260254_0 Ribosomal protein S1-like RNA-binding domain K02945 - - 0.0000000000000000000000000000000000000000000000000000000000004342 226.0
YHH1_k127_8260254_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000001173 199.0
YHH1_k127_8351292_0 Phosphoglycolate phosphatase K01091 - 3.1.3.18 0.00000000000000000000000000001774 126.0
YHH1_k127_8351292_1 HD domain - - - 0.00000003136 64.0
YHH1_k127_8356077_0 UvrD/REP helicase N-terminal domain K03657,K07465 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000003207 213.0
YHH1_k127_8356077_1 Putative Ig domain - - - 0.00000000000000000004354 107.0
YHH1_k127_8356077_2 amine dehydrogenase activity K01224 - 3.2.1.89 0.00000294 59.0
YHH1_k127_8357369_0 Elongation factor Tu C-terminal domain K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 606.0
YHH1_k127_8357369_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003321 342.0
YHH1_k127_8357369_2 Forms part of the polypeptide exit tunnel K02926 - - 0.0000000000000000000000000000000000000000000000000209 186.0
YHH1_k127_8357369_3 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000303 189.0
YHH1_k127_8357369_4 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000021 157.0
YHH1_k127_8357369_5 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000000000000876 147.0
YHH1_k127_8357369_6 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000003104 116.0
YHH1_k127_8357369_7 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.00000000000000000000000003656 115.0
YHH1_k127_8357369_8 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000005146 98.0
YHH1_k127_8432421_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 4.05e-228 736.0
YHH1_k127_8432421_1 domain protein K06881 - 3.1.13.3,3.1.3.7 0.0000001697 60.0
YHH1_k127_8533883_0 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000006547 153.0
YHH1_k127_8533883_1 Protein of unknown function (DUF4012) - - - 0.0000000000000000000969 104.0
YHH1_k127_859147_0 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006909 293.0
YHH1_k127_859147_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001853 243.0
YHH1_k127_859147_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858,K00969,K01488,K03574 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034355,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043094,GO:0043173,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.1.23,2.7.7.18,3.5.4.4,3.6.1.55 0.0000000000000000000000000000000000007016 150.0
YHH1_k127_8672759_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007213 591.0
YHH1_k127_8672759_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000002196 230.0
YHH1_k127_8672759_2 SAICAR synthetase K01587 GO:0000082,GO:0000278,GO:0003674,GO:0003824,GO:0004638,GO:0004639,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006144,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009113,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0022402,GO:0034641,GO:0034654,GO:0042440,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0046040,GO:0046112,GO:0046148,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903047 4.1.1.21,6.3.2.6 0.0000000000000000000000000000000000000000000000000000002531 211.0
YHH1_k127_8729351_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 2.732e-315 987.0
YHH1_k127_8729351_1 Belongs to the 5'-nucleotidase family - - - 0.0000000000000000003111 101.0
YHH1_k127_8768258_0 Reverse transcriptase (RNA-dependent DNA polymerase) K00986 - 2.7.7.49 0.0000004668 61.0
YHH1_k127_8768258_1 FtsK SpoIIIE family protein K03466 - - 0.000001195 57.0
YHH1_k127_8966277_0 Endoribonuclease that initiates mRNA decay K18682 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 509.0
YHH1_k127_8966277_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001234 270.0
YHH1_k127_8966277_2 YmdB-like protein K09769 - - 0.0000000000000000000000000000000000000000000000003762 181.0
YHH1_k127_8996094_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004313 610.0
YHH1_k127_8996094_1 succinylglutamate desuccinylase aspartoacylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 360.0
YHH1_k127_8996094_2 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 GO:0000049,GO:0002937,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017144,GO:0018130,GO:0019438,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 323.0
YHH1_k127_8996094_3 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006012 300.0
YHH1_k127_8996094_4 Belongs to the PdaD family K02626 - 4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001163 281.0
YHH1_k127_8996094_5 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000001039 123.0
YHH1_k127_8996094_6 Uncharacterized protein family UPF0004 K18707 - 2.8.4.5 0.00000000000001589 76.0
YHH1_k127_8996094_7 guanosine phosphorylase activity K09913 GO:0003674,GO:0003824,GO:0004731,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016154,GO:0016740,GO:0016757,GO:0016763,GO:0044424,GO:0044444,GO:0044464 2.4.2.1,2.4.2.2 0.00004963 53.0
YHH1_k127_8996094_8 - - - - 0.0001416 44.0
YHH1_k127_9005742_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 3.613e-234 747.0
YHH1_k127_9007064_0 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000004716 118.0
YHH1_k127_9007064_1 Excinuclease ABC C subunit domain protein K07461 - - 0.0000000000000000000002511 99.0
YHH1_k127_9007064_2 Divergent 4Fe-4S mono-cluster K05337 - - 0.000000000001919 70.0
YHH1_k127_909393_0 COG1404 Subtilisin-like serine proteases K14645 GO:0005575,GO:0005576 - 0.000000000000000000000000000000000000000000000000008236 190.0
YHH1_k127_909393_2 Large extracellular alpha-helical protein K12548,K13735 - - 0.00003267 56.0
YHH1_k127_913035_0 Beta propeller domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 538.0
YHH1_k127_913035_1 membrane protein (DUF2207) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000001417 204.0
YHH1_k127_913035_2 - - - - 0.00000000000000000000000000000000000008956 143.0
YHH1_k127_913035_3 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0003674,GO:0003824,GO:0004764,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0055114,GO:0071704,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000001169 131.0
YHH1_k127_913035_4 PFAM SCP-like extracellular - - - 0.00000000000000000000000648 112.0
YHH1_k127_913035_5 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000001597 105.0
YHH1_k127_913035_6 Domain of Unknown Function with PDB structure (DUF3850) - - - 0.0000006716 54.0
YHH1_k127_915306_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000005476 87.0
YHH1_k127_9178148_0 COG3104 Dipeptide tripeptide permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 423.0
YHH1_k127_9178148_1 Protein of unknown function (DUF533) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003081 245.0
YHH1_k127_9178148_2 Cro/C1-type HTH DNA-binding domain - - - 0.00000000000000000000000000003367 119.0
YHH1_k127_9178148_3 Addiction module toxin, RelE StbE family K07334 - - 0.0000000000000000000000000005056 115.0
YHH1_k127_9228056_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain II K01840 - 5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006258 366.0
YHH1_k127_9228056_1 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000003725 107.0
YHH1_k127_9228056_2 phosphomannomutase K01840,K15778 - 5.4.2.2,5.4.2.8 0.00000000000000001672 83.0
YHH1_k127_9228056_3 Polymer-forming cytoskeletal - - - 0.00000009213 59.0
YHH1_k127_9261455_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.3 2.795e-232 738.0
YHH1_k127_9276482_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000033 209.0
YHH1_k127_9276482_1 TIGRFAM methionine-R-sulfoxide reductase K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000333 192.0
YHH1_k127_9276482_2 TspO/MBR family K05770 - - 0.0000000000000000000000000000000000000866 146.0
YHH1_k127_9294575_0 site-specific DNA-methyltransferase (adenine-specific) activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001648 254.0
YHH1_k127_9294575_1 Domain of unknown function (DUF4433) - - - 0.00000000000000000000001429 107.0
YHH1_k127_9311586_0 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000005035 182.0
YHH1_k127_9311586_1 TIGRFAM membrane protein insertase, YidC Oxa1 family K03217 - - 0.00000000000000000000000000000007986 135.0
YHH1_k127_9311586_2 Prephenate dehydratase K04518 - 4.2.1.51 0.000000000000000000000000007067 115.0
YHH1_k127_9311586_3 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13010 - 2.6.1.102 0.00000000000000000408 88.0
YHH1_k127_9311586_4 nucleotidyltransferase activity - - - 0.0000000000000001471 91.0
YHH1_k127_9311586_5 leucine-zipper of insertion element IS481 - - - 0.000000002566 68.0
YHH1_k127_9311586_6 -O-antigen K02847 - - 0.000000005757 68.0
YHH1_k127_9312916_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 378.0
YHH1_k127_9312916_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 353.0
YHH1_k127_9312916_2 Sugar-specific transcriptional regulator TrmB - - - 0.0000000000000000000000000000000008572 140.0
YHH1_k127_947023_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000006829 248.0
YHH1_k127_947023_1 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006165,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:1901360 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000006757 215.0
YHH1_k127_9510747_0 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000365 237.0
YHH1_k127_9510747_1 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000004684 233.0
YHH1_k127_9510747_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000004266 204.0
YHH1_k127_9510747_3 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000001162 60.0
YHH1_k127_9534077_0 Belongs to the 'phage' integrase family K04763 - - 0.000000000000000000000000001352 117.0
YHH1_k127_9534077_1 Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus - - - 0.00000001507 66.0
YHH1_k127_959273_0 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 340.0
YHH1_k127_959273_1 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0001857 44.0
YHH1_k127_9594751_0 O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 451.0
YHH1_k127_9594751_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 413.0
YHH1_k127_9594751_10 Cold shock protein domain - - - 0.00000000000003169 75.0
YHH1_k127_9594751_11 recombinase activity - - - 0.00000000000003367 85.0
YHH1_k127_9594751_12 Succinylglutamate desuccinylase - - - 0.0000000000003349 79.0
YHH1_k127_9594751_13 histidine kinase HAMP region domain protein K03406 - - 0.000000000005315 79.0
YHH1_k127_9594751_14 methyltransferase DDB_G0268948-like - - - 0.0000001922 63.0
YHH1_k127_9594751_15 Glutamate-cysteine ligase family 2(GCS2) K06048 - - 0.00001536 55.0
YHH1_k127_9594751_16 Antioxidant, AhpC TSA family - - - 0.0003775 52.0
YHH1_k127_9594751_2 lipase activity K15125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 404.0
YHH1_k127_9594751_3 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 290.0
YHH1_k127_9594751_4 Domain of unknown function (DUF4215) - - - 0.00000000000000000000000000000000000000000006553 186.0
YHH1_k127_9594751_5 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000005747 166.0
YHH1_k127_9594751_6 - K09712,K14475 - - 0.00000000000000000000000000057 119.0
YHH1_k127_9594751_7 Transcriptional regulator K07729 - - 0.00000000000000000000000002146 109.0
YHH1_k127_9594751_8 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000003642 105.0
YHH1_k127_9594751_9 Lamin Tail Domain - - - 0.000000000000006819 91.0
YHH1_k127_9595448_0 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000245 219.0
YHH1_k127_9668901_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1280.0
YHH1_k127_9668901_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1219.0
YHH1_k127_9688348_1 23S rRNA-intervening sequence protein - - - 0.00000000001635 70.0
YHH1_k127_9688348_2 PFAM Conserved TM helix repeat-containing protein - - - 0.00000009385 57.0
YHH1_k127_9688348_3 COG1388 FOG LysM repeat K19224 - - 0.0000002227 63.0
YHH1_k127_9688348_4 domain, Protein - - - 0.00002554 57.0
YHH1_k127_9694399_0 TIGRFAM CRISPR locus-related DNA-binding K07725 - - 0.000000000000000000000000000000000000000000000000000001951 197.0
YHH1_k127_9694399_1 protein catabolic process K03420,K13525,K17681 - - 0.0000000000000000000000000000000000000000002042 175.0
YHH1_k127_9694399_2 - - - - 0.000000000000000000000000004089 119.0
YHH1_k127_9694399_3 Protein of unknown function (DUF559) K07458 - - 0.000000000000000000000313 99.0
YHH1_k127_9694399_6 polysaccharide biosynthetic process - - - 0.000006553 55.0
YHH1_k127_9694399_7 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.00001355 51.0
YHH1_k127_9718240_0 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000006382 202.0
YHH1_k127_9718240_1 HD domain - - - 0.000000000000000000000000000007314 129.0
YHH1_k127_9753343_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000005288 191.0
YHH1_k127_9753343_2 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin K00170 - 1.2.7.1 0.0000000000000002957 80.0
YHH1_k127_979370_0 peptidase U32 K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 371.0
YHH1_k127_979370_1 PFAM NIF3 (NGG1p interacting factor 3) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 343.0
YHH1_k127_979370_2 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0000000000000000000000001742 113.0
YHH1_k127_9804128_0 Patched family K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006804 291.0
YHH1_k127_9804128_1 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000001448 136.0
YHH1_k127_9804128_2 nuclear chromosome segregation - - - 0.0000000000000001317 85.0
YHH1_k127_9804128_3 Thiopurine S-methyltransferase (TPMT) - - - 0.000000000000005827 83.0
YHH1_k127_9804128_4 - - - - 0.00000000000009958 83.0
YHH1_k127_9804128_5 peptidase K21471 - - 0.00000002544 68.0
YHH1_k127_9804128_6 cellulase activity K01218,K12132 - 2.7.11.1,3.2.1.78 0.0005241 53.0
YHH1_k127_9861319_0 Penicillin-binding Protein dimerisation domain K03587,K08384 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008144,GO:0008150,GO:0008658,GO:0008955,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0031224,GO:0031226,GO:0031406,GO:0032153,GO:0033218,GO:0033293,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:1901363,GO:1901681 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 397.0
YHH1_k127_9861319_1 SPFH domain-Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006961 282.0
YHH1_k127_9861319_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000216 249.0
YHH1_k127_9861319_3 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000005285 85.0
YHH1_k127_9862705_0 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003297 283.0
YHH1_k127_9862705_1 domain protein K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000005575 187.0
YHH1_k127_9862705_2 Archaeal transcriptional regulator TrmB - - - 0.000000002612 66.0
YHH1_k127_9862705_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00008419 48.0
YHH1_k127_9908336_0 histidyl-tRNA aminoacylation K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 417.0
YHH1_k127_9908336_1 cell envelope-related transcriptional attenuator - - - 0.000000000000000000000000000000000000767 149.0
YHH1_k127_9908336_2 PFAM Peptidase S24 S26A S26B, conserved region K03100 - 3.4.21.89 0.00000000000000000000000000000000003388 142.0
YHH1_k127_9908336_3 GatB Yqey domain protein K09117 - - 0.000000000000000000000001171 108.0
YHH1_k127_9908336_4 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0005787 45.0
YHH1_k127_9967130_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 419.0
YHH1_k127_9967130_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000001807 256.0
YHH1_k127_9967130_2 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000000000000000000000000000000000000000001767 170.0
YHH1_k127_9967130_4 - - - - 0.00000000000000000003723 91.0
YHH1_k127_9967130_6 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000001237 81.0
YHH1_k127_9967130_7 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000003663 67.0
YHH1_k127_9967130_8 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000002783 60.0
YHH1_k127_9985840_0 Catalyzes the attachment of glycine to tRNA(Gly) K01880 GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0016874,GO:0016875,GO:0046983,GO:0140098,GO:0140101 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 519.0
YHH1_k127_9985840_1 COG0436 Aspartate tyrosine aromatic aminotransferase K14260 GO:0003674,GO:0003824,GO:0004021,GO:0005488,GO:0006082,GO:0006090,GO:0006520,GO:0006522,GO:0006523,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009078,GO:0009079,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019272,GO:0019752,GO:0019842,GO:0030170,GO:0030632,GO:0032787,GO:0033554,GO:0036094,GO:0042221,GO:0042851,GO:0042852,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046144,GO:0046145,GO:0046394,GO:0046416,GO:0046436,GO:0046437,GO:0046677,GO:0047635,GO:0048037,GO:0050662,GO:0050896,GO:0051716,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.2,2.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 351.0