Overview

ID MAG04555
Name YHH3_bin.12
Sample SMP0123
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order SG8-11
Family SG8-11
Genus UBA6921
Species
Assembly information
Completeness (%) 74.74
Contamination (%) 3.37
GC content (%) 59.0
N50 (bp) 4,586
Genome size (bp) 2,293,569

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2401

Gene name Description KEGG GOs EC E-value Score Sequence
YHH3_k127_10027907_0 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002705 274.0
YHH3_k127_10027907_1 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000008031 267.0
YHH3_k127_10027907_2 2Fe-2S iron-sulfur cluster binding domain K00523 - 1.17.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000002812 249.0
YHH3_k127_10027907_3 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000000000000000000000000001248 192.0
YHH3_k127_10056613_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 GO:0000302,GO:0003674,GO:0003824,GO:0004802,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006098,GO:0006139,GO:0006355,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009052,GO:0009117,GO:0009635,GO:0009636,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010035,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016740,GO:0016744,GO:0019219,GO:0019222,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0019842,GO:0030145,GO:0030976,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0033554,GO:0034599,GO:0034614,GO:0034641,GO:0035690,GO:0036094,GO:0036245,GO:0042221,GO:0042493,GO:0042542,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0046496,GO:0046677,GO:0046872,GO:0046914,GO:0048037,GO:0048518,GO:0048522,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051156,GO:0051171,GO:0051173,GO:0051186,GO:0051252,GO:0051254,GO:0051716,GO:0055086,GO:0060255,GO:0065007,GO:0070301,GO:0070887,GO:0071236,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0072524,GO:0072747,GO:0072756,GO:0080090,GO:0097159,GO:0097237,GO:1901135,GO:1901322,GO:1901360,GO:1901363,GO:1901562,GO:1901564,GO:1901654,GO:1901655,GO:1901681,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 2.2.1.1 0.0 1101.0
YHH3_k127_10056613_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 9.577e-269 845.0
YHH3_k127_10056613_10 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 443.0
YHH3_k127_10056613_11 COG1194 A G-specific DNA glycosylase K03575 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 417.0
YHH3_k127_10056613_12 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit K00405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 343.0
YHH3_k127_10056613_13 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000928 321.0
YHH3_k127_10056613_14 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 300.0
YHH3_k127_10056613_15 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 290.0
YHH3_k127_10056613_16 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002454 259.0
YHH3_k127_10056613_17 D,D-heptose 1,7-bisphosphate phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000000004014 234.0
YHH3_k127_10056613_18 carbonic anhydrase K01674 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000001809 233.0
YHH3_k127_10056613_19 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000001144 202.0
YHH3_k127_10056613_2 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 3.25e-268 830.0
YHH3_k127_10056613_20 glycosyl - - - 0.0000000000000000000000000000000000000000000000000001466 195.0
YHH3_k127_10056613_21 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.0000000000000000000000000000000000000001871 152.0
YHH3_k127_10056613_22 PFAM RNP-1 like RNA-binding protein - - - 0.00000000000000000000000000006685 119.0
YHH3_k127_10056613_23 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K20978 - - 0.0000000000000000000001674 100.0
YHH3_k127_10056613_24 COG2104 Sulfur transfer protein involved in thiamine biosynthesis K03154 - - 0.0000000000000000001697 89.0
YHH3_k127_10056613_25 Domain of unknown function (DUF3330) - - - 0.0000000000003835 72.0
YHH3_k127_10056613_26 - - - - 0.00000002267 61.0
YHH3_k127_10056613_27 Cbb3-type cytochrome oxidase component FixQ - - - 0.00000002714 59.0
YHH3_k127_10056613_29 - - - - 0.000001676 54.0
YHH3_k127_10056613_3 Belongs to the phosphoglycerate kinase family K00927 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3 1.794e-220 692.0
YHH3_k127_10056613_4 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 1.468e-199 632.0
YHH3_k127_10056613_5 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 602.0
YHH3_k127_10056613_6 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005551 597.0
YHH3_k127_10056613_7 glycyl-tRNA synthetase, alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008474 543.0
YHH3_k127_10056613_8 response regulator K20977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 497.0
YHH3_k127_10056613_9 TIGRFAM cytochrome c oxidase accessory protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 470.0
YHH3_k127_10086559_0 Asparagine synthase K01953 - 6.3.5.4 8.096e-292 907.0
YHH3_k127_10086559_1 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008807 527.0
YHH3_k127_10086559_2 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 424.0
YHH3_k127_10086559_3 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 287.0
YHH3_k127_10086559_4 Protein of unknown function (DUF3485) - - - 0.0000000000000000000000000000000000000000007695 167.0
YHH3_k127_10093303_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0 1019.0
YHH3_k127_10093303_1 Bacterial regulatory helix-turn-helix protein, lysR family K13634 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 375.0
YHH3_k127_10093303_2 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009939 306.0
YHH3_k127_10117195_0 Protein of unknown function (DUF1343) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 552.0
YHH3_k127_10117195_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01539 - 3.6.3.9 0.000000000000000000000000000000000000000000001113 168.0
YHH3_k127_10117195_2 PilZ domain K03406 - - 0.0000000000000000000000000000000000000009663 157.0
YHH3_k127_10117195_3 - - - - 0.00000000000000000000000000000000003916 140.0
YHH3_k127_10160808_0 Ompa motb domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007944 397.0
YHH3_k127_10165878_0 signal transduction histidine kinase - - - 1.677e-210 680.0
YHH3_k127_10165878_1 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002773 452.0
YHH3_k127_10165878_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006418,GO:0006431,GO:0006464,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019752,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000002344 225.0
YHH3_k127_10165878_3 Response regulator receiver K13599 - - 0.00000000000000000000000000000000000000000000001173 174.0
YHH3_k127_10165878_4 Domain of unknown function (DUF4390) - - - 0.000000000000000000000000000001013 131.0
YHH3_k127_101738_0 - - - - 0.000000000000000000000007048 115.0
YHH3_k127_101738_1 - - - - 0.0002146 51.0
YHH3_k127_10176262_0 Belongs to the agmatine deiminase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004906 465.0
YHH3_k127_10176262_1 CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 327.0
YHH3_k127_10176262_2 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.00000000000000000000003824 100.0
YHH3_k127_10189761_0 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 566.0
YHH3_k127_10189761_1 - - - - 0.000000000000000000000000000000555 124.0
YHH3_k127_10207654_0 sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 389.0
YHH3_k127_10207654_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000001185 231.0
YHH3_k127_10207654_2 TIGRFAM CRISPR-associated protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002446 226.0
YHH3_k127_10207654_3 Part of a sulfur-relay system K11179 - - 0.00000000000000000000000000000000000000005886 156.0
YHH3_k127_10207654_4 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000005376 66.0
YHH3_k127_10207654_5 - - - - 0.000000000009821 70.0
YHH3_k127_1023316_0 glutamate synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004739 416.0
YHH3_k127_1023316_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. K02584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 345.0
YHH3_k127_10250585_0 PFAM TrkA-N domain K03499 - - 2.549e-218 684.0
YHH3_k127_10250585_1 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 610.0
YHH3_k127_10250585_2 response regulator receiver K13599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003916 327.0
YHH3_k127_10250585_3 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001463 279.0
YHH3_k127_10250585_4 PFAM Sel1 domain protein repeat-containing protein K07126 - - 0.00000000000000000000000000000000000000714 155.0
YHH3_k127_10250585_5 Rhodanese Homology Domain - - - 0.000000000000000000000000000114 117.0
YHH3_k127_10287939_0 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 368.0
YHH3_k127_10287939_1 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006678 369.0
YHH3_k127_10287939_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 349.0
YHH3_k127_10287939_3 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 306.0
YHH3_k127_10287939_4 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000652 272.0
YHH3_k127_10287939_5 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002811 248.0
YHH3_k127_10298530_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.804e-234 730.0
YHH3_k127_10298530_1 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.00000000000000000000000000000000000000000000000000000000000002407 219.0
YHH3_k127_10319208_0 lipoprotein K07121 GO:0000270,GO:0003674,GO:0005575,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0030203,GO:0030234,GO:0030312,GO:0030313,GO:0031241,GO:0031975,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044425,GO:0044462,GO:0044464,GO:0050790,GO:0065007,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0098552,GO:0098772,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000471 224.0
YHH3_k127_10319208_1 BON domain - - - 0.0000000000000000000000000000000000000000001314 166.0
YHH3_k127_10319208_2 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000000000128 123.0
YHH3_k127_10319208_3 PFAM FAD linked oxidase domain protein K03777 - 1.1.5.12 0.00000005937 54.0
YHH3_k127_10324069_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 4.993e-284 884.0
YHH3_k127_10324069_1 Putative diguanylate phosphodiesterase K21025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 523.0
YHH3_k127_10324069_2 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 445.0
YHH3_k127_10366608_0 protein conserved in bacteria K11904 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0006464,GO:0006807,GO:0006996,GO:0007010,GO:0007015,GO:0008144,GO:0008150,GO:0008152,GO:0008154,GO:0009405,GO:0009987,GO:0016043,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0018149,GO:0018153,GO:0018193,GO:0018199,GO:0018205,GO:0018262,GO:0018995,GO:0019538,GO:0022411,GO:0030029,GO:0030036,GO:0030042,GO:0030430,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032984,GO:0033643,GO:0033646,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043624,GO:0043656,GO:0043657,GO:0043933,GO:0044215,GO:0044216,GO:0044217,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0046872,GO:0051261,GO:0051704,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0097435,GO:1901265,GO:1901363,GO:1901564 - 0.0000000000000000000006825 100.0
YHH3_k127_10366608_1 Domain of unknown function (DUF4150) - - - 0.0000000000000000000182 103.0
YHH3_k127_10379704_0 cytochrome C peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003934 595.0
YHH3_k127_10379704_1 cytochrome C peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 557.0
YHH3_k127_10379704_2 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 492.0
YHH3_k127_10379704_3 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001826 280.0
YHH3_k127_10379704_4 - - - - 0.000000000000000000000000000000000000000000000000000005196 211.0
YHH3_k127_10379704_5 antisigma factor binding - - - 0.0000000000000002757 89.0
YHH3_k127_10389826_0 Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)- (lauroyl)-lipid IV(A) K02517,K12974 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006082,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0006950,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008951,GO:0009058,GO:0009245,GO:0009247,GO:0009266,GO:0009311,GO:0009312,GO:0009409,GO:0009628,GO:0009987,GO:0016020,GO:0016051,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0019752,GO:0036103,GO:0036104,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046467,GO:0046493,GO:0050896,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.241,2.3.1.242 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002541 294.0
YHH3_k127_10389826_1 PFAM Three-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000007068 267.0
YHH3_k127_10432961_0 Protein of unknown function, DUF255 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 471.0
YHH3_k127_10432961_1 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 329.0
YHH3_k127_10432961_2 PFAM Phosphoribosyl-ATP pyrophosphohydrolase K01523 GO:0000105,GO:0003674,GO:0003824,GO:0004636,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.6.1.31 0.00000000000000000000000000000000000000000000008092 169.0
YHH3_k127_10432961_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.00000000000000000002356 96.0
YHH3_k127_10432961_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 GO:0002790,GO:0003674,GO:0005215,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0034613,GO:0042886,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705 - 0.0000000000000000002121 90.0
YHH3_k127_10432961_5 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.000000000000000000707 86.0
YHH3_k127_10435482_0 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009127 354.0
YHH3_k127_10435482_1 FG-GAP repeat protein - - - 0.000000000000000000000000000000000000000001469 177.0
YHH3_k127_10435482_2 Hep Hag repeat protein - - - 0.000000000000000006468 98.0
YHH3_k127_1045651_0 Aldehyde dehydrogenase family K00128 - 1.2.1.3 5.013e-218 683.0
YHH3_k127_1045651_1 smart pdz dhr glgf - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001133 259.0
YHH3_k127_10482685_0 methionine synthase K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0019842,GO:0031419,GO:0032259,GO:0034641,GO:0035999,GO:0036094,GO:0036211,GO:0042084,GO:0042558,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050667,GO:0051186,GO:0071704,GO:0097159,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 0.0 1221.0
YHH3_k127_10490674_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 559.0
YHH3_k127_10490674_1 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008897 473.0
YHH3_k127_10490674_2 Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis K15539 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.00000000000000000000000000007752 127.0
YHH3_k127_10496040_0 Oxygen tolerance - - - 0.000000000000000000000000000000000000000000002706 177.0
YHH3_k127_10496040_1 Protein of unknown function (DUF3570) - - - 0.0000000000000000000000000000000000000000003033 169.0
YHH3_k127_10519515_0 Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Prokaryotic type I sub-subfamily K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004184 333.0
YHH3_k127_10519515_1 Copper chaperone PCu(A)C K09796 - - 0.00000000000000002081 90.0
YHH3_k127_10519515_2 With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P K04568 GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006430,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000003302 82.0
YHH3_k127_10519515_3 PFAM electron transport protein SCO1 SenC K07152 - - 0.0001454 46.0
YHH3_k127_1052300_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 4.998e-208 648.0
YHH3_k127_1052300_1 NADH dehydrogenase K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000001024 241.0
YHH3_k127_1052300_2 NADH-quinone oxidoreductase subunit F K00335 - 1.6.5.3 0.000000000000005781 74.0
YHH3_k127_10555073_0 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003175 425.0
YHH3_k127_10555073_1 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0016070,GO:0016853,GO:0016866,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 308.0
YHH3_k127_10564815_0 Response regulator of the LytR AlgR family K02477,K08083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003157 263.0
YHH3_k127_10564815_1 Histidine kinase K08082 - 2.7.13.3 0.000000000000000000000000000000000000000002313 160.0
YHH3_k127_10564815_2 PFAM sodium calcium exchanger membrane region K07301 - - 0.0008668 42.0
YHH3_k127_10565375_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1329.0
YHH3_k127_10565375_1 PFAM Pentapeptide - - - 0.0000000000000000000000000000000000002645 150.0
YHH3_k127_10568143_0 Putative DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000004871 199.0
YHH3_k127_10568143_1 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000004395 174.0
YHH3_k127_10568143_2 PFAM DsrE DsrF-like family - - - 0.00000000000000000000000000000001504 129.0
YHH3_k127_10568143_3 helix_turn_helix, cAMP Regulatory protein - - - 0.000000000000000000000000004216 119.0
YHH3_k127_10577288_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 1.794e-276 867.0
YHH3_k127_10577288_1 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000000000000000000000001298 181.0
YHH3_k127_10588147_0 PFAM Type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000635 584.0
YHH3_k127_10588147_1 TIGRFAM dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 536.0
YHH3_k127_10588147_10 Heptaprenyl diphosphate synthase component I K00805 - 2.5.1.30 0.000000000000000000000000000000000000000000000000002202 188.0
YHH3_k127_10588147_11 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.000000000000000000000000000000000001661 143.0
YHH3_k127_10588147_12 NusG domain II - - - 0.0000000000000003665 85.0
YHH3_k127_10588147_13 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000415 70.0
YHH3_k127_10588147_14 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000001071 61.0
YHH3_k127_10588147_2 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 496.0
YHH3_k127_10588147_3 Type II/IV secretion system protein K02670 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003946 483.0
YHH3_k127_10588147_4 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 285.0
YHH3_k127_10588147_5 Belongs to the UPF0301 (AlgH) family K07735 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000036 256.0
YHH3_k127_10588147_6 phosphoribosyltransferase K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000004314 235.0
YHH3_k127_10588147_7 Oxidoreductase FAD-binding domain K02823 - - 0.0000000000000000000000000000000000000000000000000000000000000000002526 231.0
YHH3_k127_10588147_8 tonb protein K03832 - - 0.0000000000000000000000000000000000000000000000000000000004709 213.0
YHH3_k127_10588147_9 Oxidoreductase FAD-binding domain K02823 - - 0.000000000000000000000000000000000000000000000000000000007981 206.0
YHH3_k127_10598537_0 PFAM aminotransferase class I and II K14260 - 2.6.1.2,2.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002903 503.0
YHH3_k127_10598537_1 Homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004894 392.0
YHH3_k127_10598537_2 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000005464 159.0
YHH3_k127_10600140_0 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008932,GO:0008933,GO:0009893,GO:0016020,GO:0016740,GO:0016757,GO:0019222,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043085,GO:0044093,GO:0044464,GO:0048518,GO:0050789,GO:0050790,GO:0051341,GO:0051353,GO:0061783,GO:0065007,GO:0065009 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 394.0
YHH3_k127_10600140_1 COG0500 SAM-dependent methyltransferases - - - 0.00003703 55.0
YHH3_k127_10615880_0 FAD linked - - - 0.0 1154.0
YHH3_k127_10615880_1 Part of a sulfur-relay system K11179 - - 0.0000000000000000000000000000000000000000000000000001418 186.0
YHH3_k127_10618574_0 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0010467,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0050896,GO:0051604,GO:0051716,GO:0070417,GO:0071704,GO:0097159,GO:0097367,GO:0097428,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1990230,GO:1990234 - 1.915e-260 815.0
YHH3_k127_10618574_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 1.717e-209 657.0
YHH3_k127_10618574_10 Sel1-like repeats. - - - 0.0000002343 58.0
YHH3_k127_10618574_2 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 394.0
YHH3_k127_10618574_3 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 374.0
YHH3_k127_10618574_4 Type II/IV secretion system protein K02670 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 356.0
YHH3_k127_10618574_5 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006317 318.0
YHH3_k127_10618574_6 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.00000000000000000000000000000000000000000000000000000000000000000000000001601 260.0
YHH3_k127_10618574_7 Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins K13643 GO:0003674,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000002771 212.0
YHH3_k127_10618574_8 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000000000000000000004617 177.0
YHH3_k127_10618574_9 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 - - 0.00000000000000000000000000000000003309 141.0
YHH3_k127_10619462_0 TIGRFAM channel protein, hemolysin III family K11068 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 292.0
YHH3_k127_10619462_1 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000002298 243.0
YHH3_k127_10619462_2 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000001753 216.0
YHH3_k127_10619462_3 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000003094 201.0
YHH3_k127_10619462_5 Protein of unknown function (DUF465) - - - 0.000000000005954 74.0
YHH3_k127_10648372_0 4-alpha-glucanotransferase K00705,K06044 - 2.4.1.25,5.4.99.15 0.0 1191.0
YHH3_k127_10658236_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 517.0
YHH3_k127_10658236_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 344.0
YHH3_k127_10658236_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 294.0
YHH3_k127_10658236_3 Deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008746 280.0
YHH3_k127_10658236_4 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 GO:0000287,GO:0003674,GO:0003824,GO:0003848,GO:0005488,GO:0016740,GO:0016772,GO:0016778,GO:0043167,GO:0043169,GO:0046872 2.7.6.3 0.00000000000000000000000000000000000000000000000008302 183.0
YHH3_k127_10658236_5 DNA restriction-modification system K07317 - 2.1.1.72 0.0000000000358 63.0
YHH3_k127_10658236_6 - - - - 0.0000568 48.0
YHH3_k127_10658454_0 receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 394.0
YHH3_k127_10658454_1 - - - - 0.00000000000000001203 94.0
YHH3_k127_10658454_2 TRAP transporter T-component - - - 0.0000000000000006848 82.0
YHH3_k127_10662962_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.678e-226 708.0
YHH3_k127_10662962_1 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784,K12448 - 5.1.3.2,5.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003721 492.0
YHH3_k127_10662962_2 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 486.0
YHH3_k127_10662962_3 Metallophosphoesterase K07098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 441.0
YHH3_k127_10662962_4 Peptidase_C39 like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001187 270.0
YHH3_k127_10662962_5 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002609 264.0
YHH3_k127_10662962_6 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006337 243.0
YHH3_k127_10662962_7 COG0575 CDP-diglyceride synthetase - - - 0.000000000000000000000000000000000000000001921 161.0
YHH3_k127_10662962_8 Polysaccharide chain length determinant protein - - - 0.000000000000000000001137 96.0
YHH3_k127_10662962_9 - - - - 0.00000000000000000001446 97.0
YHH3_k127_10681691_0 Pyridine nucleotide-disulphide oxidoreductase K00362,K05297 - 1.18.1.1,1.7.1.15 2.513e-274 852.0
YHH3_k127_10681691_1 ABC transporter K02049,K15578 - - 1.235e-204 640.0
YHH3_k127_10698178_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005951 516.0
YHH3_k127_10698178_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0000000000000000000000000006116 115.0
YHH3_k127_10698178_2 protein conserved in bacteria - - - 0.000000000000000000002722 95.0
YHH3_k127_10712818_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 428.0
YHH3_k127_10712818_1 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 395.0
YHH3_k127_10712818_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000001616 215.0
YHH3_k127_10712818_3 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000002695 175.0
YHH3_k127_10745548_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007975 569.0
YHH3_k127_10745548_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006276,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008150,GO:0008152,GO:0009330,GO:0009987,GO:0016020,GO:0016043,GO:0019897,GO:0019898,GO:0022402,GO:0030541,GO:0032991,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0098813,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004436 282.0
YHH3_k127_10746866_0 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.00000000000000000000000000000000000000000000000000000000000000000002544 240.0
YHH3_k127_10746866_1 - - - - 0.000000000000000000000000000000000000000000001809 173.0
YHH3_k127_10746866_2 cation transport ATPase K01533 - 3.6.3.4 0.000000000000000000000000000000000009825 138.0
YHH3_k127_10746866_3 DNA alkylation repair - - - 0.0000000000000000000000000000000001254 135.0
YHH3_k127_10746866_4 TIGRFAM cytochrome oxidase maturation protein, cbb3-type - - - 0.00000000000004949 78.0
YHH3_k127_10752215_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 577.0
YHH3_k127_10752215_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000004736 262.0
YHH3_k127_10752215_2 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.000000000000000000000000000000000000000000002205 166.0
YHH3_k127_10752215_3 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000002036 100.0
YHH3_k127_10786415_0 Anthranilate synthase component I K01657,K01665 - 2.6.1.85,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005435 477.0
YHH3_k127_10786415_1 PFAM Aminotransferase, class IV K02619 - 4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003671 281.0
YHH3_k127_10797573_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 2.184e-321 994.0
YHH3_k127_10797573_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000983 529.0
YHH3_k127_10797573_2 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 399.0
YHH3_k127_10797573_3 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 368.0
YHH3_k127_10797573_4 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008376 252.0
YHH3_k127_10797573_5 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000000000000000000000000008042 185.0
YHH3_k127_10797573_6 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000000000009833 96.0
YHH3_k127_10806726_0 PFAM Aminoglycoside phosphotransferase K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007674 361.0
YHH3_k127_10806726_1 PFAM Nucleotidyl transferase K00992 - 2.7.7.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009898 295.0
YHH3_k127_10806726_2 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000008902 169.0
YHH3_k127_10806726_3 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000009485 161.0
YHH3_k127_10806726_4 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000000003213 132.0
YHH3_k127_10817336_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 527.0
YHH3_k127_10817336_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 310.0
YHH3_k127_10817336_2 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003745 280.0
YHH3_k127_10817336_3 Ferric uptake regulator family K03711 - - 0.000000000000000000000000000000000000000000000000000000000001205 211.0
YHH3_k127_10817336_4 Polyketide cyclase dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000004465 201.0
YHH3_k127_10817336_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.00000000000000000000001213 103.0
YHH3_k127_10817336_6 Belongs to the UPF0125 (RnfH) family K09801 - - 0.00000000000000000000005749 102.0
YHH3_k127_10817336_7 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.00000000000000003376 81.0
YHH3_k127_10817336_8 - - - - 0.00000000001315 76.0
YHH3_k127_10855499_0 Transcriptional regulator K13633 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 312.0
YHH3_k127_10855499_1 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001821 278.0
YHH3_k127_10855499_2 Transcriptional regulator K13633 - - 0.0000000000000000000000000000000000000000000000000000000003306 209.0
YHH3_k127_10855499_3 Cytochrome c K19713 - 1.8.2.2 0.00000000000000000000000000000000000002152 149.0
YHH3_k127_10855499_4 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.1 0.000000000005501 69.0
YHH3_k127_10855499_5 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.00007796 47.0
YHH3_k127_10875467_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 491.0
YHH3_k127_10889657_0 ABC transporter transmembrane region K06147 - - 3.796e-246 773.0
YHH3_k127_10889657_1 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009439 292.0
YHH3_k127_10889657_2 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.0000000000000000000000000000000000000000000000000002344 188.0
YHH3_k127_10889657_3 cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000004391 111.0
YHH3_k127_10892774_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006382 476.0
YHH3_k127_10892774_1 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000257 223.0
YHH3_k127_10892774_2 ferredoxin, 2Fe-2S K04755 - - 0.000000000000000000000000000000000000000000000000003666 183.0
YHH3_k127_10892774_3 Fe-S assembly protein IscX - GO:0003674,GO:0004857,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0030234,GO:0031163,GO:0043086,GO:0043167,GO:0043169,GO:0044085,GO:0044092,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050790,GO:0051186,GO:0065007,GO:0065009,GO:0071840,GO:0098772 - 0.000000000000000000000000133 106.0
YHH3_k127_10892774_4 type IV pilus biogenesis stability protein PilW K02656 - - 0.00002824 51.0
YHH3_k127_10892774_5 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0010467,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0050896,GO:0051604,GO:0051716,GO:0070417,GO:0071704,GO:0097159,GO:0097367,GO:0097428,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1990230,GO:1990234 - 0.000176 44.0
YHH3_k127_10900880_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 7.449e-284 876.0
YHH3_k127_10900880_1 pathogenesis - - - 0.000000000000000000000000000000000000000000000009762 180.0
YHH3_k127_10900880_2 Belongs to the MEMO1 family K06990 - - 0.00000000000000000000000000000000669 133.0
YHH3_k127_10931247_0 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0036094,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046184,GO:0046483,GO:0046872,GO:0046914,GO:0048037,GO:0050570,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007825 427.0
YHH3_k127_10931247_1 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000152 162.0
YHH3_k127_10931247_2 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000003444 105.0
YHH3_k127_10941304_0 PFAM aminotransferase, class I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 519.0
YHH3_k127_10941304_1 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003849 352.0
YHH3_k127_10941304_2 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.000000000000000000000000000000000000000000000000000000000000006862 222.0
YHH3_k127_10941304_3 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 - - 0.0000000000000000000000000000000000000000000000000000000000002145 218.0
YHH3_k127_10941304_4 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000001506 202.0
YHH3_k127_10941304_5 Bacterial protein of unknown function (DUF883) - - - 0.00000000000000000000000001413 113.0
YHH3_k127_10941304_6 Late competence development protein ComFB - - - 0.000000000000000000000678 98.0
YHH3_k127_10941304_7 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0000000000132 73.0
YHH3_k127_10941304_8 YqjK-like protein - - - 0.00000002214 60.0
YHH3_k127_10941304_9 methyl-accepting chemotaxis protein K03406 - - 0.00002658 55.0
YHH3_k127_10950132_0 Vitamin B12 dependent methionine synthase activation region K00548 - 2.1.1.13 7.705e-252 780.0
YHH3_k127_10956764_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009404 349.0
YHH3_k127_10956764_1 Ferredoxin - - - 0.000000000000000000000000000000000000000000000004353 173.0
YHH3_k127_10956764_2 pfam abc K09695 - - 0.00000000000000000000000009 108.0
YHH3_k127_11000785_0 signal transduction histidine kinase - - - 0.00000000000000000000000000000000000007365 158.0
YHH3_k127_11009371_0 heat shock protein binding - - - 8.103e-233 752.0
YHH3_k127_11009371_1 heat shock protein binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 541.0
YHH3_k127_11009371_10 COG3209 Rhs family protein - - - 0.000000001339 72.0
YHH3_k127_11009371_11 repeat-containing protein - - - 0.000297 51.0
YHH3_k127_11009371_2 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 516.0
YHH3_k127_11009371_3 peptidase activity, acting on L-amino acid peptides K01337,K01400,K20276 - 3.4.21.50,3.4.24.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 343.0
YHH3_k127_11009371_4 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000000000001182 221.0
YHH3_k127_11009371_5 Sel1 domain protein repeat-containing protein K07126 - - 0.0000000000000000000000000000000000000000000000000000003733 215.0
YHH3_k127_11009371_6 major facilitator superfamily - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.00000000000000000000000000000000000000000000000000009862 192.0
YHH3_k127_11009371_7 PFAM Ankyrin repeat K06867 - - 0.0000000000000000000000000000000000000000000000000004943 199.0
YHH3_k127_11009371_8 ferredoxin-NADP+ reductase activity - - - 0.0000000000000000000000000000000000000007518 162.0
YHH3_k127_11009371_9 heat shock protein binding - - - 0.000000000000000001204 91.0
YHH3_k127_11059468_0 Receptor family ligand binding region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 487.0
YHH3_k127_11059468_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002905 436.0
YHH3_k127_11059468_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 - 2.7.7.87 0.000000000000000000000000000000005295 130.0
YHH3_k127_11059660_0 PFAM thioesterase superfamily K10806 - - 0.0000000000000000000000000000000000000000000008083 169.0
YHH3_k127_11059660_1 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.000008339 49.0
YHH3_k127_11084398_0 DNA polymerase X family K02347 - - 5.989e-198 623.0
YHH3_k127_11084398_1 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0001666,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0034355,GO:0034641,GO:0034654,GO:0036293,GO:0043094,GO:0043173,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044403,GO:0044419,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0075136,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 0.00000000000000000000000000000000000000000000000000000000000000000000001597 247.0
YHH3_k127_11089440_0 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 567.0
YHH3_k127_11089440_1 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0000000000000000000000000000000000000000000006108 167.0
YHH3_k127_11089440_2 Histidine kinase K07647 - 2.7.13.3 0.000000005269 61.0
YHH3_k127_11134882_0 Dehydrogenase E1 component K00164 - 1.2.4.2 8.508e-236 741.0
YHH3_k127_11134882_1 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000000000000000000000405 112.0
YHH3_k127_11134882_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.000003396 49.0
YHH3_k127_11140654_0 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 1.252e-207 663.0
YHH3_k127_11140654_1 Glycosyltransferase family 92 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002951 250.0
YHH3_k127_11140654_2 Tellurite resistance protein TehB - - - 0.000000000000000000000000000000000000000000000000000000000000000299 226.0
YHH3_k127_11140654_3 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000003088 173.0
YHH3_k127_11140654_4 Methyltransferase FkbM family - - - 0.00000000000000000000000000000000009236 142.0
YHH3_k127_11140654_5 Predicted periplasmic lipoprotein (DUF2279) K05811 - - 0.00000000000002569 77.0
YHH3_k127_11153629_0 MMPL family - - - 0.0 1247.0
YHH3_k127_11153629_1 PFAM Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 328.0
YHH3_k127_11153629_2 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000002725 200.0
YHH3_k127_11153629_3 Protein of unknown function (DUF3014) - - - 0.0000000000000000000000000000000000000000000000000005813 193.0
YHH3_k127_11153629_4 LysM domain - - - 0.000000002139 63.0
YHH3_k127_11158279_0 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 546.0
YHH3_k127_11158279_1 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005365 371.0
YHH3_k127_11158279_2 Uncharacterised protein family (UPF0093) K08973 - - 0.000000000000000000000000000000000000000000000000000000000006808 210.0
YHH3_k127_11158279_3 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000000002891 207.0
YHH3_k127_11199450_0 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 451.0
YHH3_k127_11199450_1 Squalene/phytoene synthase - - - 0.0000000000000000000000000000000000000000000000000000000000002994 216.0
YHH3_k127_11199450_2 HAD-superfamily hydrolase, subfamily IA, variant 1 K22292 - 3.1.3.105 0.0000000009311 59.0
YHH3_k127_11201000_0 atpase related to the helicase subunit of the holliday junction resolvase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002604 409.0
YHH3_k127_11201000_1 Small-conductance mechanosensitive channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000771 275.0
YHH3_k127_11201000_2 nitric oxide dioxygenase activity K00529 - 1.18.1.3 0.000000000000000000009283 93.0
YHH3_k127_11201000_4 Pfam:DUF1049 - - - 0.00009549 48.0
YHH3_k127_11211591_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 1.297e-223 703.0
YHH3_k127_11211591_1 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008799 381.0
YHH3_k127_11211591_2 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 GO:0001510,GO:0002128,GO:0002130,GO:0002131,GO:0002132,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016427,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052665,GO:0052666,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000000000004211 222.0
YHH3_k127_11211591_3 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.00000000000000000000000000000000000000000000000000000000000596 211.0
YHH3_k127_11211591_4 PFAM Thioredoxin domain K03672 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000005847 201.0
YHH3_k127_11211591_5 regulatory protein, arsR - - - 0.000000000000000000000000000000000000000000000006435 174.0
YHH3_k127_11211591_6 PFAM Rhodanese-like - - - 0.00000000000000000000000000000000001348 139.0
YHH3_k127_11211591_7 COG4942 Membrane-bound metallopeptidase - GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.000000000000000000000000000000001567 140.0
YHH3_k127_11211591_8 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.0000000000000000000001795 102.0
YHH3_k127_112256_0 TIGRFAM Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 2.171e-215 674.0
YHH3_k127_112256_1 Thioredoxin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000432 346.0
YHH3_k127_112256_10 of membrane protease K07340 - - 0.000000000000000000000000000000000000000002921 163.0
YHH3_k127_112256_11 YCII-related domain K09780 - - 0.000000000000000000000000000000000000001235 154.0
YHH3_k127_112256_12 Belongs to the BolA IbaG family K05527 - - 0.000000000000000000000000008302 113.0
YHH3_k127_112256_13 COG0330 Membrane protease subunits, stomatin prohibitin homologs - - - 0.0000000000000000000002013 98.0
YHH3_k127_112256_14 threonine efflux protein - - - 0.000005772 51.0
YHH3_k127_112256_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 330.0
YHH3_k127_112256_3 Belongs to the pseudouridine synthase RsuA family K06178 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 323.0
YHH3_k127_112256_4 Belongs to the SUA5 family - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004816 292.0
YHH3_k127_112256_5 Peptidase M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003038 292.0
YHH3_k127_112256_6 probably involved in intracellular septation K06190 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000179 248.0
YHH3_k127_112256_7 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001359 246.0
YHH3_k127_112256_8 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000006323 236.0
YHH3_k127_112256_9 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000000000001324 186.0
YHH3_k127_11237695_0 Belongs to the MEMO1 family K06990 - - 0.0000000000000000000000000000000000000000000000000000000000000009285 220.0
YHH3_k127_11237695_1 pfam ammecr1 K09141 - - 0.000000000000000000000000000000000000000000000000000000000000002266 224.0
YHH3_k127_11237695_2 Pentapeptide repeats (8 copies) - - - 0.0000000000000000000000000000000000000000000000000112 192.0
YHH3_k127_11237695_3 Flagellar hook-length control protein FliK - - - 0.0000111 56.0
YHH3_k127_11261216_0 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 484.0
YHH3_k127_11261216_1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase K02527 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 475.0
YHH3_k127_11261216_2 Isochorismatase family - - - 0.000000000000000000000000000000001682 131.0
YHH3_k127_11266104_0 Allophanate hydrolase K01457 - 3.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005939 471.0
YHH3_k127_11266104_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000001397 207.0
YHH3_k127_11277372_0 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 4.076e-195 619.0
YHH3_k127_11277372_1 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.000000000000000000000000000000000000000000000000000000000002331 216.0
YHH3_k127_11278048_0 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003679 315.0
YHH3_k127_11278048_1 SAM-dependent K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003081 280.0
YHH3_k127_11311390_0 DAHP synthetase I family K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 597.0
YHH3_k127_11311390_1 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01835 - 5.4.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000428 462.0
YHH3_k127_11311390_2 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 377.0
YHH3_k127_11311390_3 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006506 304.0
YHH3_k127_11311390_4 Protein conserved in bacteria K09922 - - 0.0000000000000000000000000000000000000000000000000000000003082 204.0
YHH3_k127_11311390_5 Bacterial dnaA protein helix-turn-helix K07491 - - 0.00000000000000000000000000000000000000000000000000001113 201.0
YHH3_k127_11311390_6 TfoX N-terminal domain K07343 - - 0.00000000000000000000000000002065 120.0
YHH3_k127_11311390_7 Protein of unknown function (DUF2892) - - - 0.0000000000000000003183 90.0
YHH3_k127_11311390_8 DnaJ-class molecular chaperone - - - 0.0000000000005658 76.0
YHH3_k127_11334464_0 PFAM sodium calcium exchanger membrane region K07300 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006375 382.0
YHH3_k127_11334464_1 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 384.0
YHH3_k127_11334464_2 5'-nucleotidase, C-terminal domain K01119 - 3.1.3.6,3.1.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008312 356.0
YHH3_k127_11334464_3 5'-nucleotidase, C-terminal domain K01119 - 3.1.3.6,3.1.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 342.0
YHH3_k127_11334464_4 Protein of unknown function (DUF3365) - - - 0.00000000000000000000000000000000000000000000000007883 184.0
YHH3_k127_11334464_5 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.0000000000000000000000000000000000000000000008084 177.0
YHH3_k127_11334464_6 PFAM YicC-like - - - 0.000000000000000000000000000000006173 133.0
YHH3_k127_11341211_0 branched-chain amino acid transport system, permease component K11961 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 555.0
YHH3_k127_11341211_1 TIGRFAM urea ABC transporter, ATP-binding protein UrtD K11962 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004734 398.0
YHH3_k127_11341211_2 Belongs to the binding-protein-dependent transport system permease family K11960 - - 0.000000000000000000000000000000000000000000000000000000001677 201.0
YHH3_k127_11341211_3 ABC transporter - - - 0.000001949 58.0
YHH3_k127_11361580_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000003263 234.0
YHH3_k127_11361580_1 Sterile alpha motif. - GO:0008150,GO:0018996,GO:0022404,GO:0032501,GO:0042303,GO:0042395 - 0.000001183 52.0
YHH3_k127_11370855_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 3.582e-241 767.0
YHH3_k127_11370855_1 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008678 437.0
YHH3_k127_11370855_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 395.0
YHH3_k127_11370855_3 Belongs to the skp family K06142 - - 0.000000000000000000000000000000000000000831 155.0
YHH3_k127_11370855_4 Catalyzes the N-acylation of UDP-3-O- (hydroxytetradecanoyl)glucosamine using 3-hydroxytetradecanoyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.00000000000000000000000000000000000000718 153.0
YHH3_k127_11376562_0 Alanine-glyoxylate amino-transferase K14261,K14267 - 2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 358.0
YHH3_k127_11376562_1 Aminotransferase, class I K14267 - 2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000002294 235.0
YHH3_k127_11376562_2 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000003864 239.0
YHH3_k127_11376562_3 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000001762 193.0
YHH3_k127_11376562_4 lactoylglutathione lyase activity K08234 - - 0.0000000000000000000000000000000000006565 141.0
YHH3_k127_11443397_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 2.979e-220 688.0
YHH3_k127_11443397_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007104 523.0
YHH3_k127_11443397_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 435.0
YHH3_k127_11443397_3 COG0835 Chemotaxis signal transduction protein K03415 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003627 376.0
YHH3_k127_11443397_4 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000000007597 223.0
YHH3_k127_11443397_5 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K01498,K11752 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006725,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0008703,GO:0008835,GO:0009058,GO:0009110,GO:0009231,GO:0009451,GO:0009987,GO:0016070,GO:0016491,GO:0016614,GO:0016616,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019239,GO:0034641,GO:0036094,GO:0042364,GO:0042726,GO:0042727,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000004398 168.0
YHH3_k127_11453291_0 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 400.0
YHH3_k127_11453291_1 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000005155 169.0
YHH3_k127_11470240_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 1.153e-201 638.0
YHH3_k127_11470240_1 cAMP phosphodiesterases class-II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000621 291.0
YHH3_k127_11470240_2 Cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000004883 225.0
YHH3_k127_11495811_0 PFAM binding-protein-dependent transport systems inner membrane component K02038 - - 7.883e-231 726.0
YHH3_k127_11495811_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 433.0
YHH3_k127_11495811_2 PFAM Binding-protein-dependent transport systems inner membrane component K02037 - - 0.0000000000000000000000000000000000000000000000003403 176.0
YHH3_k127_11495811_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000003114 163.0
YHH3_k127_11535429_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 3.439e-202 636.0
YHH3_k127_11535429_1 ATPase (AAA K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 323.0
YHH3_k127_11535429_2 PKHD-type hydroxylase K07336 - - 0.00000000000000000000000000000000000000000000002609 174.0
YHH3_k127_11535429_3 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000000000000001263 153.0
YHH3_k127_11535429_4 Uncharacterized ACR, COG1993 K09137 - - 0.0000000000000000000000000000000216 133.0
YHH3_k127_11557385_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002604 464.0
YHH3_k127_11557385_1 Protein of unknown function (DUF2892) - - - 0.00000000000000000002779 93.0
YHH3_k127_11563374_0 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 337.0
YHH3_k127_11563374_1 PFAM glutaredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000271 277.0
YHH3_k127_11563374_2 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000000000024 190.0
YHH3_k127_11563374_3 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.000000000000000000000000000000000000000000000001524 176.0
YHH3_k127_11563374_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000007227 172.0
YHH3_k127_11646710_0 Protein of unknown function (DUF1631) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004014 268.0
YHH3_k127_11646710_1 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000008244 138.0
YHH3_k127_11658904_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 4.199e-247 770.0
YHH3_k127_11675987_0 TIGRFAM ATP-dependent DNA helicase, RecQ K03654 - 3.6.4.12 1.309e-229 719.0
YHH3_k127_11701513_0 COG0451 Nucleoside-diphosphate-sugar epimerases K08679,K17947 - 5.1.3.25,5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 347.0
YHH3_k127_11701513_1 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001 319.0
YHH3_k127_11701513_2 PFAM Citrate transporter - - - 0.00000000000000000000000000000000000000000000003937 172.0
YHH3_k127_11705139_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00436 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 9.89e-308 945.0
YHH3_k127_11705139_1 hydrogenase maturation protease - - - 0.000000000000000162 81.0
YHH3_k127_11719856_0 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 433.0
YHH3_k127_11719856_1 Mitochondrial biogenesis AIM24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 412.0
YHH3_k127_11719856_2 COG1404 Subtilisin-like serine proteases K14645 - - 0.000000000000000000000000000000000000000000000000000000000000000000001294 247.0
YHH3_k127_11719856_3 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000002866 136.0
YHH3_k127_11719856_4 - - - - 0.00000000000005432 78.0
YHH3_k127_11729388_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1039.0
YHH3_k127_11729388_1 Transport of potassium into the cell K03549 - - 6.525e-240 756.0
YHH3_k127_11729388_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 484.0
YHH3_k127_11729388_3 Belongs to the dCTP deaminase family K01494 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006244,GO:0006253,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008829,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009166,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009223,GO:0009262,GO:0009264,GO:0009314,GO:0009394,GO:0009628,GO:0009987,GO:0015949,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046065,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003703 357.0
YHH3_k127_11729388_4 Part of a membrane complex involved in electron transport K03616 - - 0.000000000000000000000000000000000000000000000000000000000000000001776 233.0
YHH3_k127_11729388_5 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000005215 162.0
YHH3_k127_11729388_6 Type IV Pilus-assembly protein W K02672 - - 0.000000000000000000000000000000000000003331 155.0
YHH3_k127_11729388_7 pilus modification protein PilV K02671 - - 0.00000000000000000000000002657 115.0
YHH3_k127_11729388_8 Type II transport protein GspH - - - 0.000000000000000007636 90.0
YHH3_k127_11730388_0 Drug exporters of the RND superfamily K06994,K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003788 368.0
YHH3_k127_11730388_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 324.0
YHH3_k127_11730388_2 Molybdenum cofactor biosynthesis K03638,K03831 - 2.7.7.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 293.0
YHH3_k127_11730388_3 - - - - 0.0000000000000000000000000000004837 123.0
YHH3_k127_11730388_4 - - - - 0.000000000000000000001316 104.0
YHH3_k127_11730388_5 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.000000000000000000003763 94.0
YHH3_k127_11730388_6 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.0000000000000961 71.0
YHH3_k127_11730388_7 Phytochelatin synthase - - - 0.00003538 47.0
YHH3_k127_11733125_0 PFAM Glycosyl transferase family 2 K00721,K20534 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 292.0
YHH3_k127_11733125_1 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000001146 181.0
YHH3_k127_11733125_2 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000002537 112.0
YHH3_k127_11733125_3 Polysaccharide biosynthesis protein - - - 0.0000000000000002266 81.0
YHH3_k127_11736463_0 PFAM Hydantoinase B oxoprolinase K01474 - 3.5.2.14 0.00000000000000000000000007261 108.0
YHH3_k127_11736463_1 oligosaccharyl transferase activity - - - 0.00000000000000000000002893 115.0
YHH3_k127_11761482_0 PFAM ABC-type uncharacterised transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005406 467.0
YHH3_k127_11761482_1 pfam abc K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004098 394.0
YHH3_k127_11761482_2 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008228 267.0
YHH3_k127_11761482_3 Protoglobin K13590,K21019 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000003102 248.0
YHH3_k127_11761482_4 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 0.00000000000000000000000000000000000000000000000004407 183.0
YHH3_k127_11763361_0 RimK-like ATP-grasp domain K05844 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 332.0
YHH3_k127_11763361_1 PFAM regulator of chromosome condensation, RCC1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006747 351.0
YHH3_k127_11763361_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008557 308.0
YHH3_k127_11763361_3 Protein of unknown function (DUF1566) - - - 0.000000000000000000000000000000000000000000000008818 195.0
YHH3_k127_11763361_4 Belongs to the SprT family K02742 - - 0.000000000000000009446 85.0
YHH3_k127_11780974_0 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007609 300.0
YHH3_k127_11780974_1 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002205 263.0
YHH3_k127_11780974_2 COG1512 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.00000000000000000000000000000000000000000000000009231 189.0
YHH3_k127_11780974_3 RF-1 domain K15034 - - 0.0000009963 51.0
YHH3_k127_11788270_0 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000001643 263.0
YHH3_k127_11788270_1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009274,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000002216 187.0
YHH3_k127_11807694_0 Protein of unknown function (DUF692) K09930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 361.0
YHH3_k127_11807694_1 - - - - 0.00000000000000000000000000138 115.0
YHH3_k127_11852186_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 4.541e-269 835.0
YHH3_k127_11852186_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 9.83e-257 796.0
YHH3_k127_11852186_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 404.0
YHH3_k127_11852186_3 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000000000000000000000000000000000000002585 205.0
YHH3_k127_11852186_4 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000002366 114.0
YHH3_k127_11852186_5 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000004646 91.0
YHH3_k127_11859333_0 SMART Peptidoglycan-binding Lysin subgroup K16291 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000565 505.0
YHH3_k127_11859333_1 Histidine triad (Hit) protein - - - 0.00000000000000000000000000000000000000000002502 164.0
YHH3_k127_11859333_2 - - - - 0.000000000000000000000007467 102.0
YHH3_k127_11872040_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 433.0
YHH3_k127_11872040_1 PFAM import inner membrane translocase subunit Tim44 - - - 0.0000000000000000000000000000000000000000000000000000001434 201.0
YHH3_k127_11872040_2 acetyltransferase - - - 0.000000000000000000000000000000000000000001405 169.0
YHH3_k127_11872040_3 Plasmid maintenance protein CcdB K19163 - - 0.0000000000000000000000000000001717 126.0
YHH3_k127_11872040_4 Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid K19164 - - 0.00000000000000000000003599 101.0
YHH3_k127_11879930_0 Belongs to the MtfA family K09933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008216 300.0
YHH3_k127_11879930_1 diguanylate cyclase K07216,K13590 - 2.7.7.65 0.0000000000000000000000000000000000000000000002017 174.0
YHH3_k127_11892295_0 Peptidoglycan-binding domain 1 protein K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009809 355.0
YHH3_k127_11892295_1 PFAM peptidase K04774 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004102 354.0
YHH3_k127_11892295_2 Spermidine synthase K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000002057 169.0
YHH3_k127_11892295_3 - - - - 0.00000000000000000000000000000001107 127.0
YHH3_k127_11897362_0 Molecular chaperone. Has ATPase activity K04079 - - 1.155e-286 892.0
YHH3_k127_11897362_1 GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 439.0
YHH3_k127_11897362_2 EXOIII K02342,K14159 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016787,GO:0016788,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0045004,GO:0045005,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071704,GO:0090304,GO:0090305,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7,3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004686 308.0
YHH3_k127_11897362_3 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000000223 141.0
YHH3_k127_11897362_4 Rhodanese Homology Domain - - - 0.0000000000000000000000211 106.0
YHH3_k127_11897362_5 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000007082 74.0
YHH3_k127_11900191_0 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 1.432e-287 895.0
YHH3_k127_11900191_1 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 2.785e-242 756.0
YHH3_k127_11900191_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 612.0
YHH3_k127_11900191_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007208 537.0
YHH3_k127_11900191_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003293 284.0
YHH3_k127_11900191_5 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000001703 252.0
YHH3_k127_11900191_6 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000002096 220.0
YHH3_k127_11900191_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000000000000003457 153.0
YHH3_k127_11900191_8 Protein required for attachment to host cells - - - 0.000000001674 60.0
YHH3_k127_11901486_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009978 374.0
YHH3_k127_11901486_1 pseudouridine synthase activity K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004571 323.0
YHH3_k127_11901486_2 PFAM YaeQ - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003465 242.0
YHH3_k127_11901486_3 COG2897 Rhodanese-related sulfurtransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000001575 243.0
YHH3_k127_11901486_4 Domain of unknown function (DUF1857) - - - 0.000000000000000000000000000000000000006864 151.0
YHH3_k127_11901486_5 Domain of unknown function (DUF5062) - - - 0.00000000000000000000000000000000004445 137.0
YHH3_k127_11901486_7 Domain of unknown function (DUF4389) - - - 0.000000000000000000000000309 108.0
YHH3_k127_11901486_8 RNA-binding K14761 - - 0.000000000000000000004804 94.0
YHH3_k127_11901486_9 Cysteine-rich CPXCG - - - 0.000000000000000002875 86.0
YHH3_k127_11913657_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003328 594.0
YHH3_k127_11913657_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 538.0
YHH3_k127_11913657_10 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.000000000000004472 77.0
YHH3_k127_11913657_11 - - - - 0.0000000009698 59.0
YHH3_k127_11913657_12 Phage integrase family - - - 0.0006524 42.0
YHH3_k127_11913657_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003803 516.0
YHH3_k127_11913657_3 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000448 503.0
YHH3_k127_11913657_4 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002803 386.0
YHH3_k127_11913657_5 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008792 327.0
YHH3_k127_11913657_6 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000003484 234.0
YHH3_k127_11913657_7 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000000000000000000000002057 218.0
YHH3_k127_11913657_8 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.0000000000000000000000000000000000005001 148.0
YHH3_k127_11913657_9 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000001011 132.0
YHH3_k127_11927493_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006414 454.0
YHH3_k127_11927493_1 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000008759 257.0
YHH3_k127_11927493_2 PFAM HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000252 239.0
YHH3_k127_11927493_3 Ethanolamine utilisation protein EutQ K06995 - - 0.000000000000000000000000000000000003242 138.0
YHH3_k127_11927493_4 Cytochrome c - - - 0.000000000000000000000000000000004217 132.0
YHH3_k127_11927493_5 Lipid A 3-O-deacylase (PagL) - - - 0.0000000000000000000000000004198 125.0
YHH3_k127_11940476_0 DNA RNA helicase - - - 2.059e-287 912.0
YHH3_k127_11964950_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 467.0
YHH3_k127_11964950_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004746 435.0
YHH3_k127_11964950_2 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009955 352.0
YHH3_k127_11964950_3 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003493 282.0
YHH3_k127_11967274_0 5'-nucleotidase, C-terminal domain K11751,K17224 - 3.1.3.5,3.6.1.45 7.883e-238 749.0
YHH3_k127_11967274_1 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 9.419e-214 671.0
YHH3_k127_11967274_2 CheB methylesterase K06597 - - 0.00000000000000000000000000000000000000000000000000004713 194.0
YHH3_k127_11967274_3 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000006773 123.0
YHH3_k127_11967274_4 Two component signalling adaptor domain K06598 - - 0.00000000000000000000000000835 119.0
YHH3_k127_12010122_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 8.48e-199 642.0
YHH3_k127_12010122_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 613.0
YHH3_k127_12010122_2 malonyl CoA-acyl carrier protein transacylase K00645 GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005347 404.0
YHH3_k127_12010122_3 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 355.0
YHH3_k127_12010122_4 MazG nucleotide pyrophosphohydrolase domain K04765 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009267,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042594,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.9 0.0000000000000000000000000000000000000000000000000000000000001347 216.0
YHH3_k127_12010122_5 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000000000000007746 132.0
YHH3_k127_12010122_6 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000006879 100.0
YHH3_k127_12074800_0 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 5.093e-200 638.0
YHH3_k127_12074800_1 NYN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003732 412.0
YHH3_k127_12074800_2 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006432 278.0
YHH3_k127_12074800_3 PFAM Outer membrane lipoprotein Slp K07285 - - 0.0000000000000000000000000000000000000004458 156.0
YHH3_k127_12074800_4 PFAM Outer membrane lipoprotein Slp K07285 - - 0.000000000000000000000000000000001141 133.0
YHH3_k127_12074800_5 Belongs to the UPF0149 family K09895 - - 0.00000000000000000000000000000001876 134.0
YHH3_k127_12074800_6 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.000000000000000000000000001112 116.0
YHH3_k127_12074800_7 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 GO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0000921,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0007010,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0019954,GO:0022402,GO:0022414,GO:0022607,GO:0030428,GO:0031106,GO:0032153,GO:0032185,GO:0032505,GO:0032506,GO:0034622,GO:0042802,GO:0043093,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0051301,GO:0061640,GO:0065003,GO:0070925,GO:0071840,GO:0090529,GO:1902410,GO:1903047 - 0.0000000000000000000004136 98.0
YHH3_k127_12074800_8 TIGRFAM TIGR02449 family protein K09892 - - 0.0000000002724 65.0
YHH3_k127_12098133_0 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0022613,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0036094,GO:0042254,GO:0042274,GO:0043167,GO:0043168,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 306.0
YHH3_k127_12098133_1 - - - - 0.000000000000000000000000000000000000000000000003827 179.0
YHH3_k127_12098133_2 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.00000000000000000000000000000000000000000004122 166.0
YHH3_k127_12126117_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 3.798e-316 973.0
YHH3_k127_12126117_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 581.0
YHH3_k127_12126117_2 COG0440 Acetolactate synthase, small (regulatory) subunit K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000009072 251.0
YHH3_k127_12126117_3 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000023 226.0
YHH3_k127_12126117_4 Protein involved in meta-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000000000001066 199.0
YHH3_k127_12126117_5 Protein of unknown function (DUF3579) - - - 0.000000000000000000005283 98.0
YHH3_k127_12126117_6 Domain of unknown function (DUF4124) - - - 0.0008199 48.0
YHH3_k127_12146675_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 519.0
YHH3_k127_12146675_1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 341.0
YHH3_k127_12146675_2 MltA-interacting protein MipA - - - 0.00000000000000000000000000000000000000000000000000000000000008773 220.0
YHH3_k127_12146675_3 - - - - 0.000000000000000000000000000000000000000000000000003333 190.0
YHH3_k127_12146675_4 Cytochrome c mono- and diheme variants - - - 0.00000000000000000000000000000000000000000000000001871 185.0
YHH3_k127_12146675_5 Cytochrome c - - - 0.0000000000000000000000000000000000000000000003939 173.0
YHH3_k127_12146675_6 pyridoxamine 5-phosphate - - - 0.00000000000000000000000000000000000182 144.0
YHH3_k127_12151768_0 COG0666 FOG Ankyrin repeat K06867 - - 0.000000000000000000000000000000003411 146.0
YHH3_k127_12151768_1 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.000000000000000002639 99.0
YHH3_k127_12151768_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000002635 55.0
YHH3_k127_12158461_0 TIGRFAM hydrogenase expression formation protein HypD K04654 - - 4.983e-229 712.0
YHH3_k127_12158461_1 PFAM AIR synthase related protein domain protein K04655 - - 5.09e-196 615.0
YHH3_k127_12158461_2 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001129 267.0
YHH3_k127_12158461_3 PFAM hydrogenase expression formation protein (HUPF HYPC) K04653 - - 0.0000000000000000000000000000000000000007861 149.0
YHH3_k127_12190972_0 Belongs to the monovalent cation proton antiporter 2 (cpa2) transporter (TC 2.A.37) family K03455 - - 1.465e-202 647.0
YHH3_k127_12190972_1 repeat-containing protein - - - 0.00000000000000000000000003022 113.0
YHH3_k127_12191080_0 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 530.0
YHH3_k127_12191080_1 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 503.0
YHH3_k127_12191080_2 General secretion pathway protein F K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 494.0
YHH3_k127_12191080_3 EVE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000007659 236.0
YHH3_k127_12191080_4 Transcriptional regulator K13641 - - 0.000000000000000000000000000002326 122.0
YHH3_k127_12191080_5 Rhodanese Homology Domain - - - 0.000007137 57.0
YHH3_k127_12191316_0 general secretion pathway protein G K02456 - - 0.0000000000000000000000000000000000000000000000000000000000000002028 223.0
YHH3_k127_12191316_1 Type II secretion system (T2SS), protein J - - - 0.000000000000000000000000000000000009683 143.0
YHH3_k127_12191316_2 Type II secretion system (T2SS), protein K K02460 - - 0.000000000000000000000000000000003201 136.0
YHH3_k127_12191316_3 General secretion pathway protein I K02458 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.0000000000000000000009341 99.0
YHH3_k127_12191316_4 general secretion pathway protein K02457 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.00000000000006131 79.0
YHH3_k127_1219204_0 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000596 226.0
YHH3_k127_1219204_1 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000002391 188.0
YHH3_k127_1219204_2 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02462 - - 0.00000000000000000006566 92.0
YHH3_k127_1219204_3 Single-stranded-DNA-specific exonuclease K07462 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0035312,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0045145,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.00000000000000002006 87.0
YHH3_k127_1219204_4 Type II secretion system (T2SS), protein N K02463 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.00000000003599 74.0
YHH3_k127_12197997_0 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000633 212.0
YHH3_k127_12197997_1 transferase activity, transferring acyl groups K03824 - - 0.0000000000000000000009082 108.0
YHH3_k127_12197997_2 Polysaccharide deacetylase - - - 0.000000000000000000002893 100.0
YHH3_k127_12197997_3 heat shock protein binding K05801 - - 0.000000008055 63.0
YHH3_k127_12216952_0 Acetamidase/Formamidase family K01455 - 3.5.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 333.0
YHH3_k127_12216952_1 PFAM Extracellular ligand-binding receptor K11959 - - 0.000000003827 59.0
YHH3_k127_12247420_0 Cytochrome c mono- and diheme variants - - - 0.00000000000000000000000000000000000000000000000003903 184.0
YHH3_k127_12247420_1 oligosaccharyl transferase activity - - - 0.0000001602 61.0
YHH3_k127_12247420_2 Protein of unknown function (DUF1722) - - - 0.0001416 44.0
YHH3_k127_12267168_0 Helicase K03722 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009972 407.0
YHH3_k127_12267168_1 COG1214 Inactive homolog of metal-dependent proteases K14742 GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000006274 229.0
YHH3_k127_12267168_2 - - - - 0.000000000000000000000000000000000000009163 148.0
YHH3_k127_12267168_3 PFAM Pentapeptide repeats (8 copies) - - - 0.00000000000000008524 94.0
YHH3_k127_12288233_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.858e-271 844.0
YHH3_k127_12288233_1 Belongs to the KdsA family K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003956 391.0
YHH3_k127_12288233_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000003405 257.0
YHH3_k127_12289688_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1444.0
YHH3_k127_12289688_1 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 456.0
YHH3_k127_12289688_10 Transcriptional regulator - - - 0.00000000004782 63.0
YHH3_k127_12289688_2 DEAD DEAH box helicase K03724 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 385.0
YHH3_k127_12289688_3 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 318.0
YHH3_k127_12289688_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 309.0
YHH3_k127_12289688_5 Histidine Phosphotransfer domain - - - 0.000000000000000000000000000000000000000000000000000000000000006442 231.0
YHH3_k127_12289688_6 involved in chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000000000009015 185.0
YHH3_k127_12289688_7 DEAD/H associated K03724 - - 0.000000000000000000000000000000000000006802 147.0
YHH3_k127_12289688_8 - - - - 0.000000000000000000000000005388 110.0
YHH3_k127_12289688_9 - - - - 0.0000000000000000004425 96.0
YHH3_k127_12316202_0 hemolysin activation secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 328.0
YHH3_k127_12316202_1 - - - - 0.00000000000000000000000000000000000000003954 166.0
YHH3_k127_12326015_0 Beta-Casp domain K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 423.0
YHH3_k127_12326015_1 OmpA family - - - 0.0002086 51.0
YHH3_k127_12377335_0 Helicase K03722 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000693 355.0
YHH3_k127_12377335_1 AAA domain K07028 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004188 329.0
YHH3_k127_12377335_2 - - - - 0.0000000000000000000000000000000000000000000000000125 185.0
YHH3_k127_12409570_0 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 358.0
YHH3_k127_12409570_1 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000000004062 196.0
YHH3_k127_12409570_2 as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.000000000000000000000000000000000000000000000000000002813 193.0
YHH3_k127_12409570_3 DUF218 domain - - - 0.00000000000000000000000000000000004222 138.0
YHH3_k127_12449829_0 transmembrane transcriptional regulator (Anti-sigma factor) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000126 272.0
YHH3_k127_12449829_1 Pseudouridine synthase K06177 - 5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000000000000000000000000000004953 255.0
YHH3_k127_12449829_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000009822 197.0
YHH3_k127_12449829_3 - - - - 0.0000000000000000000000000000000000000000000000000004575 186.0
YHH3_k127_12449829_4 Galactose-1-phosphate uridyl transferase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000838 166.0
YHH3_k127_12473981_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 369.0
YHH3_k127_12473981_1 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000004081 162.0
YHH3_k127_1249224_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005185 287.0
YHH3_k127_1249224_1 Sulfatase-modifying factor enzyme 1 K20333 - - 0.00000000000000000000000000000000000000000000000000000000000000008771 233.0
YHH3_k127_1249224_2 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000000000000000000000000000000000000000000000000009308 194.0
YHH3_k127_12519026_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006873 509.0
YHH3_k127_12534499_0 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000002061 258.0
YHH3_k127_12534499_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000004222 209.0
YHH3_k127_1254865_0 protein conserved in bacteria K09800 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032940,GO:0032991,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0097347 - 0.000000000000000000000000000000000000000000000000000000000000000000000000008137 272.0
YHH3_k127_12582573_0 Oxidative deamination of D-amino acids K00285 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0008150,GO:0008152,GO:0008718,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009987,GO:0016020,GO:0016054,GO:0016491,GO:0016638,GO:0019478,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046144,GO:0046395,GO:0046416,GO:0046436,GO:0055114,GO:0055130,GO:0071704,GO:0071944,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.4.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003813 468.0
YHH3_k127_12582573_1 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004671 318.0
YHH3_k127_12582573_2 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000006163 168.0
YHH3_k127_12582573_4 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000339 125.0
YHH3_k127_12600518_0 PLD-like domain K06131 - - 0.00000000000000000000000000000000000000000000000000000002551 201.0
YHH3_k127_12600518_1 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.000000000000000000000000000000000000000004093 160.0
YHH3_k127_12604862_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003898 620.0
YHH3_k127_12604862_1 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000000000000000000000000000000000006469 194.0
YHH3_k127_12604862_2 Flagellar hook-length control protein K02414 GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0097588 - 0.0000000000000000000000205 114.0
YHH3_k127_12604862_3 Flagellar FliJ protein - - - 0.00000000000001122 78.0
YHH3_k127_12612287_0 Belongs to the peptidase S1C family K04771,K04772 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007343 486.0
YHH3_k127_12612287_1 glycosyl transferase group 1 K17248 GO:0003674,GO:0003824,GO:0006464,GO:0006486,GO:0006487,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0070085,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.4.1.291 0.000000000000000000000000000000000000000000000001469 188.0
YHH3_k127_12612287_2 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.0000000000000000002605 102.0
YHH3_k127_12659393_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 GO:0001510,GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0003824,GO:0004808,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016782,GO:0016783,GO:0030488,GO:0032259,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 497.0
YHH3_k127_12659393_1 Domain of unknown function (DUF4105) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002514 344.0
YHH3_k127_12659393_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006464 253.0
YHH3_k127_12659393_3 Protein of unknown function (DUF489) K07153 - - 0.00000000000000000000000000000000000000000000000000000003629 202.0
YHH3_k127_12659393_4 Zn-dependent protease with chaperone function - - - 0.0000000000000000000000000000000000000000000003368 191.0
YHH3_k127_12659393_5 - - - - 0.00000000000000000000000000000284 124.0
YHH3_k127_12662249_0 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697 - 2.4.1.15,2.4.1.347 6.97e-322 1000.0
YHH3_k127_12662249_1 mechanosensitive ion channel K16052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 349.0
YHH3_k127_12662249_2 Pfam Sodium hydrogen exchanger - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001387 274.0
YHH3_k127_12662249_3 Conserved TM helix - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008056 258.0
YHH3_k127_12662249_4 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.00000000000000000000000000000000000000000000000000000005486 207.0
YHH3_k127_12662249_5 Alkaline and neutral invertase - - - 0.00000006764 59.0
YHH3_k127_12662249_6 HemY protein N-terminus K02498 - - 0.00001303 50.0
YHH3_k127_1267840_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1571.0
YHH3_k127_12697735_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 6.389e-304 951.0
YHH3_k127_12697735_1 HD domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003977 471.0
YHH3_k127_12697735_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 468.0
YHH3_k127_12697735_3 Outer membrane protein beta-barrel family K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002755 423.0
YHH3_k127_12697735_4 Phosphoglucomutase K01835 - 5.4.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005693 331.0
YHH3_k127_12697735_5 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000009261 185.0
YHH3_k127_12697735_6 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000001432 172.0
YHH3_k127_12697735_8 - - - - 0.000000000002998 73.0
YHH3_k127_12719874_0 Bacterial periplasmic substrate-binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001651 274.0
YHH3_k127_12719874_1 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000007344 209.0
YHH3_k127_12719874_2 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000009223 195.0
YHH3_k127_12719874_3 Bacterial periplasmic substrate-binding proteins - - - 0.0000000000000000000000000000000000000000000000002718 196.0
YHH3_k127_12719874_4 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000000000000000000000000000000003731 154.0
YHH3_k127_12719874_5 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.0000000000000000000000000000000000000001089 160.0
YHH3_k127_12719874_6 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000000000000000000008654 154.0
YHH3_k127_12719874_7 cheY-homologous receiver domain - - - 0.0000000000000000003989 92.0
YHH3_k127_12729964_0 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.00000000000000000000000000000000000000000000000000000000000001234 221.0
YHH3_k127_12729964_1 Iron-containing alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000001159 168.0
YHH3_k127_12730396_0 SMART cyclic nucleotide-binding K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001437 255.0
YHH3_k127_12730396_1 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.000000000000000000000000000000000000000000000002644 179.0
YHH3_k127_12730396_2 EcoEI R protein C-terminal K01153 - 3.1.21.3 0.00000000000000000000000000000000005888 134.0
YHH3_k127_12731089_0 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 GO:0003674,GO:0003824,GO:0004014,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 4.1.1.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 331.0
YHH3_k127_12731089_1 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002336 273.0
YHH3_k127_12731089_2 FmdB family transcriptional regulator - - - 0.0000000000000000003889 88.0
YHH3_k127_12731089_3 sequence-specific DNA binding - - - 0.000008774 55.0
YHH3_k127_12732091_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 341.0
YHH3_k127_12732091_1 2OG-Fe(II) oxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005819 284.0
YHH3_k127_12732091_2 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000002143 222.0
YHH3_k127_12732091_3 Sel1-like repeats. - - - 0.000000000000000000000000000000000000000000000000001359 186.0
YHH3_k127_12732091_4 - - - - 0.00000000000000000000000005449 112.0
YHH3_k127_12732091_6 membrane transporter protein K07090 - - 0.000000001048 68.0
YHH3_k127_12732453_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 3.908e-268 841.0
YHH3_k127_12740096_0 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 313.0
YHH3_k127_12740096_1 Isochorismatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009124 311.0
YHH3_k127_12740096_2 ChrR Cupin-like domain - - - 0.000000000000000000000000000000002156 132.0
YHH3_k127_12740096_3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K02056 - 3.6.3.17 0.0000000000000000000000000000005591 123.0
YHH3_k127_12746301_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.289e-303 948.0
YHH3_k127_12746301_1 PFAM aminotransferase class V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 3.963e-202 635.0
YHH3_k127_12746301_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 410.0
YHH3_k127_12746301_3 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000001236 247.0
YHH3_k127_12746301_4 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.00000000000000000000000000000000000000001488 157.0
YHH3_k127_12746301_5 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.000000000000000000000000000000000000001185 154.0
YHH3_k127_12746996_0 DNA segregation ATPase FtsK SpoIIIE K03466 - - 1.123e-246 772.0
YHH3_k127_12756994_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 373.0
YHH3_k127_12756994_1 Putative DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000659 207.0
YHH3_k127_12756994_2 Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase K07740 GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0010556,GO:0016989,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 - 0.000000000000000000000007139 106.0
YHH3_k127_12756994_3 Belongs to the UPF0276 family K09930 - - 0.000006434 48.0
YHH3_k127_12760507_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 3.528e-214 670.0
YHH3_k127_12760507_1 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001912 235.0
YHH3_k127_12760507_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.00000000000000000000000000000001891 127.0
YHH3_k127_12768750_0 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000009668 244.0
YHH3_k127_12768750_1 Thermolysin metallopeptidase, catalytic domain K01400 - 3.4.24.28 0.0000000002601 72.0
YHH3_k127_12768750_2 Peptidase M36 - - - 0.000001031 59.0
YHH3_k127_12779599_0 Domain of unknown function (DUF4150) - - - 0.00000000000000000000000000000000000000000000000000000000000000000007124 237.0
YHH3_k127_12779599_1 synthase K00647 - 2.3.1.41 0.000000000000000000000000000000000000000000000002732 186.0
YHH3_k127_12779599_2 - - - - 0.0003371 47.0
YHH3_k127_12803723_0 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 445.0
YHH3_k127_12803723_1 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005414 356.0
YHH3_k127_12803723_2 ABC transporter, ATP-binding protein K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006429 301.0
YHH3_k127_12803723_3 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008781,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016311,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016791,GO:0019143,GO:0033692,GO:0034637,GO:0034645,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0070567,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 3.1.3.45 0.0000000000000000000000000000000000000000000000000000000000000000000009979 243.0
YHH3_k127_12803723_4 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm K09774 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0009279,GO:0010876,GO:0015920,GO:0016020,GO:0017089,GO:0019867,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0042597,GO:0042802,GO:0044462,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:1901264 - 0.000000000000000002088 94.0
YHH3_k127_12803723_5 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.00000000000000007292 83.0
YHH3_k127_12810404_0 Belongs to the thiolase family K00626 - 2.3.1.9 5.572e-197 622.0
YHH3_k127_12810404_1 Acyl-CoA dehydrogenase, N-terminal domain K06445 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 438.0
YHH3_k127_12810404_2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K01782,K01825 - 1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8 0.0000000000000000000000000000000000000000000000003249 181.0
YHH3_k127_1281909_0 ABC transporter transmembrane region K18889 - - 4.684e-202 644.0
YHH3_k127_1281909_1 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003885 507.0
YHH3_k127_1281909_2 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K18104,K18890 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008144,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0031224,GO:0032553,GO:0032555,GO:0032559,GO:0033036,GO:0034040,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043492,GO:0044425,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363 3.6.3.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008798 404.0
YHH3_k127_1281909_3 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000000000000000000000000000000000000000000000000000000000002429 222.0
YHH3_k127_1281909_4 Bacterial-like globin K06886 - - 0.000000000000000000000000000000000000000000000000001484 185.0
YHH3_k127_1281909_5 - - - - 0.00000000000000000002507 94.0
YHH3_k127_12835032_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1305.0
YHH3_k127_12835032_1 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 8.777e-277 859.0
YHH3_k127_12835032_10 PFAM Prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 340.0
YHH3_k127_12835032_11 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0015939,GO:0015940,GO:0015949,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004468 286.0
YHH3_k127_12835032_12 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000303 284.0
YHH3_k127_12835032_13 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.00000000000000000000000000000000000000000007959 162.0
YHH3_k127_12835032_14 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.0000000000000000000000000000003357 123.0
YHH3_k127_12835032_15 extracellular polysaccharide biosynthetic process K07011 - - 0.00000000000000000000000004751 124.0
YHH3_k127_12835032_16 Chain length determinant protein - - - 0.00000000000000001916 94.0
YHH3_k127_12835032_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 4.403e-204 640.0
YHH3_k127_12835032_3 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 1.839e-200 633.0
YHH3_k127_12835032_4 Belongs to the mannose-6-phosphate isomerase type 2 family K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009646 580.0
YHH3_k127_12835032_5 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004619 566.0
YHH3_k127_12835032_6 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008391 557.0
YHH3_k127_12835032_7 PFAM Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006303 467.0
YHH3_k127_12835032_8 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007422 436.0
YHH3_k127_12835032_9 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007948 365.0
YHH3_k127_12843963_0 PFAM pfkB family carbohydrate kinase K00856 - 2.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008806 493.0
YHH3_k127_12843963_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 315.0
YHH3_k127_12843963_2 TIGRFAM alkylphosphonate utilization operon protein PhnA K06193 - - 0.00000000000000000000000000000000000000000000000000000000002043 207.0
YHH3_k127_12843963_3 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.0000000000000000000000000000000000000002837 152.0
YHH3_k127_12843963_4 Catalyzes the ATP-dependent phosphorylation of the 3- deoxy-D-manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position K11211 - 2.7.1.166 0.000000000000000000000000004073 113.0
YHH3_k127_12873601_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 1.844e-202 640.0
YHH3_k127_12873601_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 2.558e-199 628.0
YHH3_k127_12873601_10 EamA-like transporter family - - - 0.000000000000000000000000000000002046 136.0
YHH3_k127_12873601_11 BolA-like protein - - - 0.0000000000000000005269 93.0
YHH3_k127_12873601_12 Lysin motif - - - 0.00000000000002892 77.0
YHH3_k127_12873601_13 NTP binding protein (Contains STAS domain) K07122 - - 0.0000000000003078 74.0
YHH3_k127_12873601_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009376 451.0
YHH3_k127_12873601_3 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005579 436.0
YHH3_k127_12873601_4 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008789 382.0
YHH3_k127_12873601_5 ABC transporter permease K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004999 366.0
YHH3_k127_12873601_6 imidazoleglycerol-phosphate dehydratase K01089,K01693 - 3.1.3.15,4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007861 339.0
YHH3_k127_12873601_7 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 308.0
YHH3_k127_12873601_8 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000000000007811 211.0
YHH3_k127_12873601_9 PFAM toluene tolerance K07323 - - 0.00000000000000000000000000000000000000000000001312 178.0
YHH3_k127_1308964_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002133 247.0
YHH3_k127_1308964_1 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000002841 200.0
YHH3_k127_1308964_2 PFAM Excinuclease ABC C subunit domain protein K07461 - - 0.0000000000000000000000000000000008969 138.0
YHH3_k127_1308964_3 Chemotaxis protein histidine kinase and related - - - 0.0000000000000339 85.0
YHH3_k127_1320605_0 GTP-binding protein TypA K06207 - - 1.906e-300 933.0
YHH3_k127_1320605_1 Vitamin B12 dependent methionine synthase activation region K00548 - 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006113 488.0
YHH3_k127_1320605_2 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 318.0
YHH3_k127_1320605_3 DsrE/DsrF-like family K09004 - - 0.0000000000000000000000000008333 119.0
YHH3_k127_1346245_0 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 460.0
YHH3_k127_1346245_1 Signal transduction protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000005612 249.0
YHH3_k127_1346245_2 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000003686 205.0
YHH3_k127_1346245_4 Type II secretion system protein B K02451 - - 0.00001098 48.0
YHH3_k127_1444019_0 PilZ domain K02676 - - 0.000000000000000000000000000000000000000000000000000006191 191.0
YHH3_k127_1444019_1 DNA polymerase III, delta' K02341 - 2.7.7.7 0.000000000000000000000000000001446 128.0
YHH3_k127_1444019_2 PilZ domain K03406 - - 0.0000008214 53.0
YHH3_k127_1446256_0 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004641 492.0
YHH3_k127_1446256_1 Haloacid dehalogenase-like hydrolase K20881 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000001505 229.0
YHH3_k127_1446256_2 PFAM electron transport protein SCO1 SenC K07152 - - 0.0000000000000000000000000000000000007685 146.0
YHH3_k127_1458828_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1639.0
YHH3_k127_1458828_1 carbamoyl-phosphate synthetase glutamine chain K01956 GO:0000050,GO:0003674,GO:0003824,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006139,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0032991,GO:0034641,GO:0034654,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046394,GO:0046483,GO:0055086,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 563.0
YHH3_k127_1458828_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 531.0
YHH3_k127_1458828_3 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 525.0
YHH3_k127_1458828_4 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001525 281.0
YHH3_k127_1458828_5 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000000000000000006817 240.0
YHH3_k127_1458828_6 Domain of unknown function (DUF4149) - - - 0.00000000000000000000000001428 114.0
YHH3_k127_1458828_7 RNA-binding protein containing KH domain, possibly ribosomal protein K07574 - - 0.000000000000000000000113 104.0
YHH3_k127_1495574_0 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.000000000000000000000000000000000000000000000000000000000131 212.0
YHH3_k127_1495574_1 Peptidase family M28 - - - 0.00000000000000306 80.0
YHH3_k127_1505311_0 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 0.0 1000.0
YHH3_k127_1505311_1 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007115 331.0
YHH3_k127_1505311_2 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03188 - - 0.000000000000000000000000000000000000000000000000000000000000000000004237 243.0
YHH3_k127_1505311_3 Belongs to the urease gamma subunit family K01430 - 3.5.1.5 0.0000000000000000000000000000000000000000000000000001452 186.0
YHH3_k127_1505311_4 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.000000000000000000000000000000000000000000000001627 179.0
YHH3_k127_1505311_5 Belongs to the urease beta subunit family K01429 GO:0003674,GO:0003824,GO:0006807,GO:0008150,GO:0008152,GO:0009039,GO:0016787,GO:0016810,GO:0016811 3.5.1.5 0.0000000000000000000000000000000000000000000003309 168.0
YHH3_k127_1505311_6 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.00000002945 55.0
YHH3_k127_1538868_0 FAD dependent oxidoreductase K06954 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 571.0
YHH3_k127_1538868_1 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003729 326.0
YHH3_k127_1538868_2 Outer Membrane Lipoprotein K03098 - - 0.000000000000000000000000000000000000000000000000000000000000000000004155 241.0
YHH3_k127_1538868_3 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000001632 181.0
YHH3_k127_1538868_4 Protein of unknown function (DUF1365) K09701 - - 0.000000000000000000000003589 104.0
YHH3_k127_1613560_0 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009307 505.0
YHH3_k127_1613560_1 peptidase activity, acting on L-amino acid peptides K01337,K01400,K20276 - 3.4.21.50,3.4.24.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 302.0
YHH3_k127_1613560_2 CheB methylesterase K06597 - - 0.0005305 52.0
YHH3_k127_1659235_0 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 344.0
YHH3_k127_1659235_1 Transcriptional regulator K13643 - - 0.00000000000000000000000000000000000000000000000000000000000001488 218.0
YHH3_k127_1659235_2 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.00000000000000000000000000000000000000335 150.0
YHH3_k127_1662786_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000001482 244.0
YHH3_k127_1662786_1 Response regulator receiver - - - 0.00000000000000000000000000000001205 132.0
YHH3_k127_1760302_0 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 477.0
YHH3_k127_1760302_1 PFAM phosphoesterase PA-phosphatase related K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000001943 200.0
YHH3_k127_1760302_2 Alkaline phosphatase - - - 0.0000000000000000000007086 98.0
YHH3_k127_1760302_3 - - - - 0.0000000002646 67.0
YHH3_k127_1768549_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K00533,K18006 - 1.12.1.2,1.12.7.2 0.0 1141.0
YHH3_k127_1768549_1 Uncharacterized ACR, YdiU/UPF0061 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 575.0
YHH3_k127_1768549_2 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 521.0
YHH3_k127_1813484_0 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 332.0
YHH3_k127_1813484_1 - - - - 0.00000000000000000000000000000000093 138.0
YHH3_k127_1813484_2 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.0000004471 51.0
YHH3_k127_1826944_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835,K01840,K15778 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005488,GO:0005975,GO:0005976,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009244,GO:0009311,GO:0009312,GO:0009405,GO:0009987,GO:0016051,GO:0016053,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0042120,GO:0042121,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044419,GO:0046394,GO:0046401,GO:0046402,GO:0046872,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.4.2.2,5.4.2.8 2.415e-245 760.0
YHH3_k127_1826944_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 457.0
YHH3_k127_1859671_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003914 477.0
YHH3_k127_1859671_1 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000306 399.0
YHH3_k127_1859671_2 Mortierella verticillata NRRL 6337 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004812 330.0
YHH3_k127_1859671_3 Serine protease with a broad substrate specificity K13276,K17734 - - 0.00000000000000000007637 105.0
YHH3_k127_1878009_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 4.495e-222 699.0
YHH3_k127_1878009_1 TIGRFAM ATP-dependent helicase HrpB K03579 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000005198 238.0
YHH3_k127_1878009_2 organic phosphonate transport K02044 - - 0.00000000000000000000000000000000000000000000000002875 190.0
YHH3_k127_1878009_3 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000001699 116.0
YHH3_k127_2002383_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0 1425.0
YHH3_k127_2002383_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0042380,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046490,GO:0048037,GO:0051536,GO:0051538,GO:0051540,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 469.0
YHH3_k127_2002383_2 Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009421 393.0
YHH3_k127_2002383_3 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000000000000003401 204.0
YHH3_k127_2002383_4 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000000000002188 164.0
YHH3_k127_2002383_5 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000467 154.0
YHH3_k127_2002383_6 FKBP-type peptidyl-prolyl cis-trans isomerase K03774 - 5.2.1.8 0.0000000000000000000000000000000001846 141.0
YHH3_k127_2002383_7 COG4968 Tfp pilus assembly protein PilE K02655 - - 0.00000000000000005085 85.0
YHH3_k127_2056450_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003978 387.0
YHH3_k127_2056450_1 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000004173 214.0
YHH3_k127_2056450_2 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.000000000000000001093 89.0
YHH3_k127_2091030_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1220.0
YHH3_k127_2091030_1 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 8.144e-251 791.0
YHH3_k127_2091030_10 Belongs to the CinA family K03743 - 3.5.1.42 0.00000000000002944 73.0
YHH3_k127_2091030_11 - - - - 0.00000001723 58.0
YHH3_k127_2091030_2 Belongs to the aspartokinase family K00928 - 2.7.2.4 1.796e-209 656.0
YHH3_k127_2091030_3 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002572 566.0
YHH3_k127_2091030_4 Histidine kinase K02482,K14986 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002975 464.0
YHH3_k127_2091030_5 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006537 364.0
YHH3_k127_2091030_6 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005078 273.0
YHH3_k127_2091030_7 response regulator receiver K13041 - - 0.0000000000000000000000000000000000000000000000000000000000005856 217.0
YHH3_k127_2091030_8 Modulates RecA activity K03565 - - 0.0000000000000000000000000001611 121.0
YHH3_k127_2091030_9 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.00000000000000000000000528 103.0
YHH3_k127_2128133_0 Capsule polysaccharide biosynthesis protein K07265 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002769 252.0
YHH3_k127_2128133_1 - - - - 0.000000000000000000000000000000000000000000000000000004394 199.0
YHH3_k127_2215479_0 Peptidase family M28 - - - 4.956e-232 737.0
YHH3_k127_2215479_1 oxidoreductase FAD NAD(P)-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004652 402.0
YHH3_k127_2215479_2 due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm K01869 - 6.1.1.4 0.00000000000000000000000000000000000000001716 155.0
YHH3_k127_2215479_3 MafB19-like deaminase - - - 0.00000000000000000000000000000000000004293 148.0
YHH3_k127_2244323_0 Involved in the TonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 461.0
YHH3_k127_2244323_1 Biopolymer transport protein ExbD TolR K03560 - - 0.00000000000000000000000000000000000000000000002406 174.0
YHH3_k127_2244323_2 TonB C terminal K03646 - - 0.0000000000000000003553 98.0
YHH3_k127_225161_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 1.475e-231 732.0
YHH3_k127_2280879_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 GO:0003674,GO:0003824,GO:0003916,GO:0003917,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.2 0.0 1134.0
YHH3_k127_2280879_1 TIGRFAM DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000001938 235.0
YHH3_k127_2280879_2 Belongs to the Smg family K03747 - - 0.0000000000000000000000000000000000000000000000001163 181.0
YHH3_k127_2287975_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008022 278.0
YHH3_k127_2287975_1 Haem-degrading - - - 0.000000000000000000000000000000000000000002049 161.0
YHH3_k127_2287975_2 - - - - 0.000000000000000000004703 98.0
YHH3_k127_2408245_0 4 iron, 4 sulfur cluster binding K02574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 463.0
YHH3_k127_2408245_1 Spermidine synthase K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006952 456.0
YHH3_k127_2408749_0 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 372.0
YHH3_k127_2408749_1 Protein of unknown function - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 356.0
YHH3_k127_2433700_0 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002136 331.0
YHH3_k127_2433700_1 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000009267 175.0
YHH3_k127_2433700_2 Belongs to the ompA family K03640 GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032153,GO:0044425,GO:0044462,GO:0044464,GO:0051301,GO:0071944,GO:0098552 - 0.000000000000000000000000000000000004029 141.0
YHH3_k127_2433852_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000721 611.0
YHH3_k127_2433852_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 GO:0000049,GO:0000166,GO:0002943,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010181,GO:0010467,GO:0016070,GO:0016491,GO:0016627,GO:0017150,GO:0032553,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0048037,GO:0050662,GO:0055114,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002644 447.0
YHH3_k127_2433852_2 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 304.0
YHH3_k127_2433852_3 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004991 269.0
YHH3_k127_2433852_4 FKBP-type peptidyl-prolyl isomerase K03773 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000008253 197.0
YHH3_k127_2433852_5 Molecular chaperone - - - 0.00000000000141 78.0
YHH3_k127_2454831_0 GDSL-like Lipase/Acylhydrolase - - - 0.000000000001581 80.0
YHH3_k127_2494634_0 Belongs to the ParA family K04562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008325 410.0
YHH3_k127_2494634_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 319.0
YHH3_k127_2494634_2 PFAM GTP-binding signal recognition particle SRP54 G- domain K02404 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 302.0
YHH3_k127_2494634_3 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000000000000000000000000000000000000000000000008714 230.0
YHH3_k127_2494634_4 Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) K03414 - - 0.00000000000000000000000000000000000000000000000000000000000001445 223.0
YHH3_k127_2494634_5 Signal transducing histidine kinase, homodimeric K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000001474 177.0
YHH3_k127_2507349_0 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007644 418.0
YHH3_k127_2507349_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 399.0
YHH3_k127_2507349_2 PFAM Short-chain dehydrogenase reductase SDR K03793 - 1.5.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003583 313.0
YHH3_k127_2507349_3 sister chromatid segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000001548 233.0
YHH3_k127_2507349_4 cellulase activity - - - 0.000000000000000000000000000000000000000000001775 185.0
YHH3_k127_2507349_5 PFAM sigma-54 factor interaction domain-containing protein K02584,K07713 - - 0.0000000000000000000000000006762 123.0
YHH3_k127_2525313_0 COG2897 Rhodanese-related sulfurtransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001431 247.0
YHH3_k127_2525313_1 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0016070,GO:0016853,GO:0016866,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.27 0.0000000000002814 71.0
YHH3_k127_2525313_2 Diguanylate cyclase - - - 0.0000002474 61.0
YHH3_k127_2548679_0 Adenylate cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 344.0
YHH3_k127_2548679_1 NAD(P)H-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 314.0
YHH3_k127_2548715_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 4.95e-213 674.0
YHH3_k127_2548715_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001887 262.0
YHH3_k127_2548715_2 Belongs to the P(II) protein family K04751 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006808,GO:0008144,GO:0008150,GO:0009889,GO:0010565,GO:0017076,GO:0019216,GO:0019217,GO:0019222,GO:0030234,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042304,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0046890,GO:0050789,GO:0050790,GO:0050794,GO:0062012,GO:0065007,GO:0065009,GO:0080090,GO:0097159,GO:0097367,GO:0098772,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000207 197.0
YHH3_k127_2548715_3 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000004428 197.0
YHH3_k127_2582932_0 - - - - 0.00000000000000000000000000000000001416 148.0
YHH3_k127_2582932_1 Glycosyltransferase, group 2 family protein - - - 0.0000000000000000000000000003094 126.0
YHH3_k127_2582932_2 Glycosyl transferases group 1 - - - 0.000000007785 61.0
YHH3_k127_2610990_0 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component K02004 - - 4.715e-204 653.0
YHH3_k127_2611308_0 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 428.0
YHH3_k127_2611308_1 - - - - 0.00000000000000000002734 94.0
YHH3_k127_2611308_2 Protein of unknown function (DUF3301) - - - 0.000000000000009713 76.0
YHH3_k127_2611308_3 Protein of unknown function (DUF465) - - - 0.0000000000003774 72.0
YHH3_k127_2697600_0 glutamate synthase K00265 - 1.4.1.13,1.4.1.14 4.84e-270 843.0
YHH3_k127_2796303_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 3.485e-220 696.0
YHH3_k127_2796303_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 3.45e-205 647.0
YHH3_k127_2796303_10 protein conserved in bacteria K09921 - - 0.000000000000000000000000000000000000000005022 162.0
YHH3_k127_2796303_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 381.0
YHH3_k127_2796303_3 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008425,GO:0008757,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016741,GO:0030580,GO:0032259,GO:0042180,GO:0042181,GO:0043333,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004254 381.0
YHH3_k127_2796303_4 Belongs to the 'phage' integrase family. XerC subfamily K03733 GO:0000150,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008907,GO:0009009,GO:0009037,GO:0009987,GO:0015074,GO:0032991,GO:0034641,GO:0042150,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0071139,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003496 355.0
YHH3_k127_2796303_5 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006821 289.0
YHH3_k127_2796303_6 cation diffusion facilitator family transporter K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001441 268.0
YHH3_k127_2796303_7 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004381 251.0
YHH3_k127_2796303_8 protein conserved in bacteria K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000007844 186.0
YHH3_k127_2796303_9 Sterol-binding domain protein K03690 - - 0.0000000000000000000000000000000000000000001234 171.0
YHH3_k127_2804684_0 oxidoreductase activity K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 496.0
YHH3_k127_2804684_1 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 331.0
YHH3_k127_2804684_2 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 0.000000000000000000000000000000000000000000000000000000002166 202.0
YHH3_k127_2855802_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 493.0
YHH3_k127_2855802_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000001219 150.0
YHH3_k127_2856989_1 Predicted permease - - - 0.000000000000007466 78.0
YHH3_k127_2870807_0 PFAM Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000418 332.0
YHH3_k127_2870807_1 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008263 274.0
YHH3_k127_2870807_2 Asparagine synthase K01953 - 6.3.5.4 0.0000000001119 62.0
YHH3_k127_2939924_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 3.965e-215 677.0
YHH3_k127_2939924_1 Ammonium Transporter Family K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 355.0
YHH3_k127_2939924_2 PFAM PhoH family protein K06217 - - 0.0000000000000003526 80.0
YHH3_k127_2946935_0 Protein of unknown function (DUF2905) - - - 0.000000000000000000000000212 106.0
YHH3_k127_2946935_1 repeat protein - - - 0.0004597 53.0
YHH3_k127_2972155_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 - 1.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 465.0
YHH3_k127_2972155_1 Histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009603 436.0
YHH3_k127_2972155_2 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004951 325.0
YHH3_k127_2972155_3 Phosphate-binding protein K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 314.0
YHH3_k127_2995780_0 surface antigen variable number repeat protein K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 522.0
YHH3_k127_3075554_0 Predicted methyltransferase regulatory domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 448.0
YHH3_k127_3075554_1 tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006572 313.0
YHH3_k127_3075554_2 - - - - 0.000000000000000000000000001066 116.0
YHH3_k127_3075554_3 BON domain - - - 0.000000000002665 68.0
YHH3_k127_3089903_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 2.117e-232 724.0
YHH3_k127_3089903_1 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 544.0
YHH3_k127_3089903_2 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006554 301.0
YHH3_k127_3089903_3 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 282.0
YHH3_k127_3089903_4 organic phosphonate transport K02044 - - 0.0000000000000000000000000000000000000000000000001997 189.0
YHH3_k127_3089903_5 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.000000000000000000004511 94.0
YHH3_k127_3089903_6 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000001105 59.0
YHH3_k127_3089903_7 Conserved repeat domain - - - 0.0000005493 62.0
YHH3_k127_3091321_0 PFAM Cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007589 512.0
YHH3_k127_3091321_1 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 379.0
YHH3_k127_3091321_2 Protein of unknown function (DUF1365) K09701 - - 0.00000000000000000000000000000000000000000000000000000000000000003364 228.0
YHH3_k127_3091321_3 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 0.000000000000003123 76.0
YHH3_k127_3104076_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 2.487e-268 865.0
YHH3_k127_3104076_1 TIGRFAM Tyrosine recombinase XerD K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 379.0
YHH3_k127_3104076_2 double-strand break repair protein AddB K16899 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004157 280.0
YHH3_k127_3104076_3 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000000000000000009869 240.0
YHH3_k127_3104076_4 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000004257 213.0
YHH3_k127_3104076_5 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000000000000003956 181.0
YHH3_k127_3104076_6 PFAM Methylated-DNA- protein -cysteine S-methyltransferase DNA binding K00567 - 2.1.1.63 0.000000000000000000000000000000000003301 146.0
YHH3_k127_3120598_0 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005915 464.0
YHH3_k127_3120598_1 Methylenetetrahydrofolate reductase K00297 GO:0000166,GO:0003674,GO:0003824,GO:0004489,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0022607,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009941 404.0
YHH3_k127_3120598_2 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006152,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016053,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019439,GO:0019510,GO:0019752,GO:0030554,GO:0031667,GO:0033353,GO:0034641,GO:0034655,GO:0034656,GO:0036094,GO:0036293,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046700,GO:0048037,GO:0048511,GO:0048512,GO:0050662,GO:0050667,GO:0050896,GO:0051186,GO:0051187,GO:0051287,GO:0055086,GO:0070482,GO:0071268,GO:0071704,GO:0072521,GO:0072523,GO:0097159,GO:0097458,GO:0098604,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901657,GO:1901658 3.3.1.1 0.000000000000000000000000000000000000000000000000000000006006 199.0
YHH3_k127_3120598_3 Competence protein ComEA K02237 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.000000000000002616 78.0
YHH3_k127_3134442_0 PFAM NADH Ubiquinone plastoquinone (complex I) K05568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 416.0
YHH3_k127_3134442_1 Exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006925 379.0
YHH3_k127_3134442_2 LysR family K21703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 353.0
YHH3_k127_3134442_3 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007722 304.0
YHH3_k127_3134442_4 - - - - 0.0000000000000000000000000000000000000000000000000000000001424 214.0
YHH3_k127_3134442_5 antiporter activity K05570 - - 0.0000000000000000000000001988 108.0
YHH3_k127_3134442_6 multisubunit Na H antiporter MnhE subunit K05562,K05569 - - 0.000000000000000000000000526 108.0
YHH3_k127_3134442_7 monovalent cation:proton antiporter activity K05571 - - 0.0000000000000000000001675 106.0
YHH3_k127_3134442_8 oligosaccharyl transferase activity - - - 0.00002461 49.0
YHH3_k127_3146361_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008975 365.0
YHH3_k127_3146361_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.000000000000000000000000000000000000000000000003595 173.0
YHH3_k127_3146361_2 Transcriptional regulator, Crp Fnr family - - - 0.000000000000000000000000001587 117.0
YHH3_k127_3162489_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 402.0
YHH3_k127_3162489_1 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000001066 261.0
YHH3_k127_3162489_2 Protein involved in outer membrane biogenesis - - - 0.00000000000000000000000000000000000000000000000000000005717 218.0
YHH3_k127_3162489_3 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.00000000000000000000000000000000000000000000001328 177.0
YHH3_k127_3168740_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 3.99e-205 646.0
YHH3_k127_3168740_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 434.0
YHH3_k127_3168740_2 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 417.0
YHH3_k127_3168740_3 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000000000000000000000000000000001191 233.0
YHH3_k127_3168740_4 - - - - 0.0000000000000000000000000000000000000000000006298 171.0
YHH3_k127_3168740_5 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000002394 148.0
YHH3_k127_3168740_6 Glutaredoxin - - - 0.0000000000000000000004522 98.0
YHH3_k127_3172304_0 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0030091,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000168 209.0
YHH3_k127_3172304_1 COG0739 Membrane proteins related to metalloendopeptidases K06194 - - 0.00000000000000000000000000000000000000000000000000000000007284 213.0
YHH3_k127_3172304_2 TIGRFAM RNA polymerase sigma factor RpoS K03087 - - 0.000000000000000000000000000000000000000000000000000005234 194.0
YHH3_k127_3222164_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 577.0
YHH3_k127_3222164_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 505.0
YHH3_k127_3226243_0 AAA ATPase, central domain protein K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007492 341.0
YHH3_k127_3226243_1 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001748 289.0
YHH3_k127_3226243_2 Metallo-beta-lactamase superfamily K01130 - 3.1.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001617 280.0
YHH3_k127_3226243_3 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K03184,K03185,K18800 - - 0.00000000000000000000001217 103.0
YHH3_k127_3228512_0 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000007768 241.0
YHH3_k127_3228512_1 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000963 176.0
YHH3_k127_3228512_2 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000001961 172.0
YHH3_k127_3228512_3 Domain of unknown function (DUF4382) - - - 0.0000000000000000000000000000000000001264 149.0
YHH3_k127_3228512_4 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000001517 141.0
YHH3_k127_3228512_5 RNA pseudouridylate synthase K06177 - 5.4.99.28,5.4.99.29 0.000000000000000000000000000003437 127.0
YHH3_k127_3228512_6 PFAM cytochrome c class I K08738 - - 0.000000000000000000002296 104.0
YHH3_k127_3257220_0 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000005421 210.0
YHH3_k127_3257220_1 Gram-negative porin - - - 0.000000000000000000000000000000000000000000000000001432 196.0
YHH3_k127_3257220_2 - - - - 0.00000000000000000000000000000000000000005035 172.0
YHH3_k127_3257220_3 Protein of unknown function (DUF2442) - - - 0.00000000000000000000002374 101.0
YHH3_k127_3257220_4 Domain of unknown function (DUF4160) - - - 0.000000000000000002937 87.0
YHH3_k127_3257220_5 - - - - 0.00000000000111 75.0
YHH3_k127_3257220_7 Serine protease with a broad substrate specificity K17734 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005509,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.0002372 48.0
YHH3_k127_3263552_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 492.0
YHH3_k127_3263552_1 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005812 343.0
YHH3_k127_3276146_0 reductase, dissimilatory-type beta subunit K11181 - 1.8.99.5 1.213e-202 634.0
YHH3_k127_3276146_1 reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 415.0
YHH3_k127_3276146_2 DsrE/DsrF-like family K07235 - - 0.00000000000000000000000000000000000000000000000000000000000008513 214.0
YHH3_k127_3276146_3 Belongs to the DsrF TusC family K07236 - - 0.000000000000000000000000000000000000000000000000000000004432 201.0
YHH3_k127_3276146_4 DsrH like protein K07237 - - 0.000000000000000000000000000000007905 129.0
YHH3_k127_3276146_5 Part of a sulfur-relay system K11179 - - 0.000000000000000000000000000001617 122.0
YHH3_k127_3291556_0 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 GO:0003674,GO:0003824,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008289,GO:0008689,GO:0008757,GO:0009058,GO:0009108,GO:0009628,GO:0009651,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0042180,GO:0042181,GO:0042538,GO:0043167,GO:0043168,GO:0043431,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0051188,GO:0061542,GO:0071704,GO:1901576,GO:1901611,GO:1901661,GO:1901663 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004235 333.0
YHH3_k127_3291556_1 HAD-superfamily hydrolase, subfamily IA, variant 1 K22292 - 3.1.3.105 0.00000000000000000000000000000000000000000000000000000000000004579 218.0
YHH3_k127_3291556_2 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000002788 136.0
YHH3_k127_3291556_3 Psort location Cytoplasmic, score 8.96 - - - 0.000000000000000000000000001069 117.0
YHH3_k127_3303117_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000003906 190.0
YHH3_k127_3360640_0 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 3.866e-199 633.0
YHH3_k127_3360640_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008445 321.0
YHH3_k127_3360640_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000001868 212.0
YHH3_k127_3376550_0 Bacterial transglutaminase-like N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005013 425.0
YHH3_k127_3376550_1 Bacterial transglutaminase-like N-terminal - - - 0.000000000000000000000000000000000000000002368 158.0
YHH3_k127_3384128_0 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 7.054e-197 621.0
YHH3_k127_3384128_1 sulphate transporter K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 580.0
YHH3_k127_3384128_10 MOSC domain - - - 0.0000000000000000000000000000000000000002121 155.0
YHH3_k127_3384128_11 Dehydratase family K01687 - 4.2.1.9 0.00000000000000000000000000000004219 127.0
YHH3_k127_3384128_12 Putative zinc- or iron-chelating domain - - - 0.00000000000000000000000000001731 122.0
YHH3_k127_3384128_13 acylphosphatase K01512 - 3.6.1.7 0.00000000000000000000008579 102.0
YHH3_k127_3384128_14 Tfp pilus assembly protein FimV K08086 - - 0.00000000000001519 83.0
YHH3_k127_3384128_15 Tetratricopeptide repeat - - - 0.00000000000006308 79.0
YHH3_k127_3384128_2 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 320.0
YHH3_k127_3384128_3 Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length K01716 - 4.2.1.59,5.3.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005961 290.0
YHH3_k127_3384128_4 thiolester hydrolase activity K06889,K07397 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006256 293.0
YHH3_k127_3384128_5 TIGRFAM ABC-2 type transporter, NodJ K09694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006037 275.0
YHH3_k127_3384128_6 Transposase IS200 like K07491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002538 241.0
YHH3_k127_3384128_7 Protein of unknown function (DUF1415) - - - 0.00000000000000000000000000000000000000000000000000000000000000000008817 238.0
YHH3_k127_3384128_8 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000001625 230.0
YHH3_k127_3384128_9 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000000008999 191.0
YHH3_k127_3401003_0 regulatory protein TetR K16137 - - 0.000000000000000000000000000000001246 133.0
YHH3_k127_3401003_1 Leucine-rich repeat K13730 - - 0.00000000000000000000000000000188 137.0
YHH3_k127_3401003_2 LamG domain protein jellyroll fold domain protein K12567 - 2.7.11.1 0.00000000000001185 87.0
YHH3_k127_340569_0 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 404.0
YHH3_k127_340569_1 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000001491 124.0
YHH3_k127_3406345_0 Oxygen tolerance - - - 0.00000000000000000000000000000000000000000000000000000000000000000000753 250.0
YHH3_k127_3406345_1 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.0000000000000000000000000000545 125.0
YHH3_k127_3426729_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 5.276e-266 826.0
YHH3_k127_3426729_1 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005408 457.0
YHH3_k127_3426729_10 protein conserved in bacteria K09937 - - 0.0000000000003505 70.0
YHH3_k127_3426729_2 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005754 417.0
YHH3_k127_3426729_3 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 368.0
YHH3_k127_3426729_4 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005984 370.0
YHH3_k127_3426729_5 HflC and HflK could regulate a protease K04087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 337.0
YHH3_k127_3426729_6 Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007103 293.0
YHH3_k127_3426729_7 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046033,GO:0046040,GO:0046085,GO:0046086,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.4 0.0000000000000000000000000000000000000000000000001028 178.0
YHH3_k127_3426729_8 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.000000000000000000000000000000000000000000000002303 177.0
YHH3_k127_3426729_9 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000000000000000000001348 137.0
YHH3_k127_3436493_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 585.0
YHH3_k127_3436493_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 417.0
YHH3_k127_3436493_2 MotA/TolQ/ExbB proton channel family K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005649 342.0
YHH3_k127_3436493_3 PFAM OmpA MotB domain protein K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000003144 241.0
YHH3_k127_3478464_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 3.204e-220 691.0
YHH3_k127_3478464_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000004433 257.0
YHH3_k127_3478464_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0003824,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008194,GO:0008289,GO:0008610,GO:0008654,GO:0008915,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0019637,GO:0019897,GO:0019898,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.0000000000000000000000000006076 116.0
YHH3_k127_3498216_0 Type II and III secretion system protein K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 466.0
YHH3_k127_3498216_1 PFAM Sporulation domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007686 377.0
YHH3_k127_3498216_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 383.0
YHH3_k127_3498216_3 Response regulator, receiver K03413 - - 0.00000000000000000006341 98.0
YHH3_k127_3519639_0 membrane organization K20543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 469.0
YHH3_k127_3519639_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000001924 128.0
YHH3_k127_3519639_2 Alpha beta hydrolase - - - 0.0000000000000002914 80.0
YHH3_k127_3532369_0 SMART alpha amylase, catalytic sub domain K05343 - 3.2.1.1,5.4.99.16 0.0 1219.0
YHH3_k127_3547742_0 belongs to the aldehyde dehydrogenase family K00154 - 1.2.1.68 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005455 494.0
YHH3_k127_3547742_1 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 322.0
YHH3_k127_3547742_2 Transcriptional regulator, LysR family K04761 - - 0.00000000000000004648 80.0
YHH3_k127_3565733_0 Signal transduction protein - - - 0.000000000000000000000000000000000000000000000001429 184.0
YHH3_k127_3565733_1 M42 glutamyl aminopeptidase - - - 0.0000000000000000000000001349 115.0
YHH3_k127_3565733_2 Oxygen tolerance - - - 0.000000000009046 70.0
YHH3_k127_3568780_0 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 542.0
YHH3_k127_3568780_1 COG1157 Flagellar biosynthesis type III secretory pathway ATPase K02412 GO:0003674,GO:0005488,GO:0005515,GO:0042802 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007731 527.0
YHH3_k127_3568780_2 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000003687 198.0
YHH3_k127_3568780_3 Protein of unknown function (DUF3494) - - - 0.000000000000000000000000000000000004357 158.0
YHH3_k127_3586793_0 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000004644 216.0
YHH3_k127_3586793_1 Nucleoside triphosphate K04765 - 3.6.1.9 0.0000000000000000000000000002147 116.0
YHH3_k127_3586793_2 Forkhead associated domain - - - 0.0000000000000001358 83.0
YHH3_k127_3597796_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 406.0
YHH3_k127_3597796_1 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.0006317 43.0
YHH3_k127_3606700_0 type II secretion system protein K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005437 456.0
YHH3_k127_3606700_1 - - - - 0.0000000000000000000000000000000000000000000000000000000008171 219.0
YHH3_k127_3606700_2 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 0.00000000000000000000000000485 111.0
YHH3_k127_3621388_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 501.0
YHH3_k127_3621388_1 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005831 353.0
YHH3_k127_3621388_2 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0016874,GO:0016879,GO:0016979,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019222,GO:0019538,GO:0019752,GO:0032787,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048519,GO:0050789,GO:0051186,GO:0051188,GO:0051604,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0140096,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000000000000984 267.0
YHH3_k127_3621388_3 general secretion pathway protein - - - 0.00000000000000000000000000000000000000000000000000000000001993 214.0
YHH3_k127_3621388_4 - - - - 0.000000000000000000000000000000000000000000000000007509 198.0
YHH3_k127_3621388_5 Belongs to the UPF0250 family K09158 - - 0.000000000000000000003607 95.0
YHH3_k127_3621388_6 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000001062 55.0
YHH3_k127_3663290_2 - - - - 0.00000000000000000000000000000000000000000008997 170.0
YHH3_k127_367492_0 PFAM peptidase M3A and M3B, thimet oligopeptidase F K01414 - 3.4.24.70 7.734e-224 703.0
YHH3_k127_367492_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 513.0
YHH3_k127_367492_2 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 339.0
YHH3_k127_367492_3 Uracil DNA glycosylase superfamily - - - 0.00000000000000000000000000000000000000000000000001333 186.0
YHH3_k127_367492_4 Domain of unknown function DUF11 - - - 0.0000000000163 78.0
YHH3_k127_367492_5 6-phosphogluconolactonase activity - - - 0.00000003136 59.0
YHH3_k127_367492_6 Bacterial SH3 domain homologues K07184 - - 0.00002267 55.0
YHH3_k127_369775_0 Belongs to the AdoMet synthase family K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006659 336.0
YHH3_k127_369775_1 Divalent cation transporter K06213 - - 0.0000000000000000001714 94.0
YHH3_k127_369775_2 mercury ion transmembrane transporter activity - - - 0.000000000000005703 79.0
YHH3_k127_3715538_0 ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000898 355.0
YHH3_k127_3715538_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 326.0
YHH3_k127_3715538_2 Radical SAM superfamily K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000008777 265.0
YHH3_k127_3715538_3 Ig-like domain from next to BRCA1 gene - - - 0.000000000000000000000000000000000000000000001385 180.0
YHH3_k127_3715538_4 COG0226 ABC-type phosphate transport system, periplasmic component K02040 - - 0.00000000000000000000000005046 113.0
YHH3_k127_3715538_5 - - - - 0.0001619 53.0
YHH3_k127_3718488_0 Glycosyl hydrolase 36 superfamily, catalytic domain - - - 2.192e-281 875.0
YHH3_k127_3723334_0 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000028,GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070475,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140102,GO:1901360,GO:1901363 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000001488 249.0
YHH3_k127_3723334_1 Sel1 domain protein repeat-containing protein K07126 - - 0.00000000000000000000000000000000000000000006511 176.0
YHH3_k127_3723334_2 glycosyl - - - 0.0000000000000000000000000000000000000000007241 161.0
YHH3_k127_37263_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009568 317.0
YHH3_k127_37263_1 Haloacid dehalogenase-like hydrolase K20881 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000005216 265.0
YHH3_k127_37263_2 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000000000000000000003165 217.0
YHH3_k127_37263_3 Regulatory protein, FmdB family - - - 0.0000000000000000000000000000000002596 133.0
YHH3_k127_3729689_0 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 467.0
YHH3_k127_3729689_1 DNA polymerase X family K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000003361 227.0
YHH3_k127_373233_0 chemotaxis, protein K02660 - - 1.615e-208 668.0
YHH3_k127_373233_1 glutamate--cysteine ligase K01919 - 6.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 570.0
YHH3_k127_373233_2 response regulator K02657 - - 0.0000000000000000000000000000000000000000000000000000000000000439 215.0
YHH3_k127_373233_3 cheY-homologous receiver domain K02658 - - 0.0000000000000000000000000000000000000000000000003107 177.0
YHH3_k127_373233_4 COG1352 Methylase of chemotaxis methyl-accepting proteins K00575,K02661 - 2.1.1.80 0.000000000000000000000000000000000000000000000008111 183.0
YHH3_k127_373233_5 Type IV pili signal transduction protein PilI K02659 - - 0.000000000000000000000000000000000000001312 153.0
YHH3_k127_373233_6 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000003891 115.0
YHH3_k127_373233_7 COG0643 Chemotaxis protein histidine kinase and related kinases K02487,K06596 - - 0.00000000000000000000003767 101.0
YHH3_k127_3734905_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000005197 229.0
YHH3_k127_3734905_1 Type VI secretion protein, EvpB/VC_A0108, tail sheath K11900 - - 0.000000000000000000000002522 116.0
YHH3_k127_3746329_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 3.366e-249 782.0
YHH3_k127_3746329_1 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 377.0
YHH3_k127_3746329_2 Belongs to the WrbA family K03809 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001331 282.0
YHH3_k127_3746329_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001597 271.0
YHH3_k127_3746329_4 Mediates the interaction of DNA replication inititator protein DnaA with DNA polymerase subunit beta sliding clamp (dnaN). Stimulates hydrolysis of ATP-DnaA to ADP-DnaA, rendering DnaA inactive for reinititation, a process called regulatory inhibition of DnaA or RIDA K10763 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008156,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030174,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:2000104,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000000000000000000000000000000000005403 246.0
YHH3_k127_3746329_5 protein conserved in bacteria K09938 - - 0.00000000000000000000000000000000000000000000000000000001387 211.0
YHH3_k127_3746329_6 PFAM CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.0000000000000000000000000000000000000000000000000004191 190.0
YHH3_k127_3746329_7 translation elongation factor activity K02358 - - 0.0000000000000000001233 88.0
YHH3_k127_3746329_8 - - - - 0.0000000000000000007206 89.0
YHH3_k127_3746329_9 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis K01933 - 6.3.3.1 0.00000000001793 67.0
YHH3_k127_3823754_0 alpha amylase catalytic K01208 - 3.2.1.133,3.2.1.135,3.2.1.54 2.504e-222 700.0
YHH3_k127_3833688_0 crp fnr family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004654 358.0
YHH3_k127_3833688_1 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000003853 190.0
YHH3_k127_3833688_2 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000008634 168.0
YHH3_k127_3845660_0 Putative porin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009686 430.0
YHH3_k127_3845660_1 Protein of unknown function (DUF5132) - - - 0.000000000000000000221 93.0
YHH3_k127_3845660_4 - - - - 0.00003276 54.0
YHH3_k127_3853291_0 His Kinase A (phospho-acceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004 354.0
YHH3_k127_3853291_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 334.0
YHH3_k127_3853291_2 TIGRFAM phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003111 248.0
YHH3_k127_3853291_3 Response regulator receiver K02485 - - 0.00000000000000000000000000000000000000000000000000000000003008 209.0
YHH3_k127_3853291_4 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000000000000000001387 197.0
YHH3_k127_3853291_5 Belongs to the RNA methyltransferase TrmD family K00554 GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000003428 124.0
YHH3_k127_3853291_6 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000567 123.0
YHH3_k127_3853291_7 cheY-homologous receiver domain - - - 0.00000000000000000000000000001341 122.0
YHH3_k127_3853291_8 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.000132 48.0
YHH3_k127_3853901_0 Fructose-1,6-bisphosphatase K01622 - 3.1.3.11,4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 402.0
YHH3_k127_3853901_1 Prolyl oligopeptidase family K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001245 263.0
YHH3_k127_3873725_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 1.482e-221 700.0
YHH3_k127_3873725_1 eight transmembrane protein EpsH - - - 1.783e-210 666.0
YHH3_k127_3873725_2 Heparinase II/III-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009071 470.0
YHH3_k127_3873725_3 phospho-N-acetylmuramoyl-pentapeptide-transferase activity K01791,K02851 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0005975,GO:0005976,GO:0006629,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008963,GO:0009058,GO:0009059,GO:0009103,GO:0009246,GO:0009274,GO:0009276,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0016051,GO:0016740,GO:0016772,GO:0016780,GO:0030145,GO:0030312,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0033692,GO:0034637,GO:0034645,GO:0042546,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044425,GO:0044459,GO:0044464,GO:0045229,GO:0046378,GO:0046872,GO:0046914,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.8.33,2.7.8.35,5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 323.0
YHH3_k127_3873725_4 PFAM glycosyl transferase WecB TagA CpsF K05946 - 2.4.1.187 0.000000000000000000000000000000000000000000000000000000000000000002371 234.0
YHH3_k127_3873725_5 Methyltransferase domain K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000004346 160.0
YHH3_k127_3874123_0 TIGRFAM cytochrome c oxidase accessory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007303 350.0
YHH3_k127_3874123_1 PFAM FixH - - - 0.00000000000000000000000000000004969 131.0
YHH3_k127_3874123_2 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0004857 43.0
YHH3_k127_3907900_0 sigma54 specific, transcriptional regulator, Fis family K10941 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005876 546.0
YHH3_k127_3907900_1 PFAM response regulator receiver K10943 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 416.0
YHH3_k127_3907900_2 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation K10942 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004551 295.0
YHH3_k127_3907900_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001104 246.0
YHH3_k127_3907900_4 dksA traR - - - 0.000000000000000000000000000007011 123.0
YHH3_k127_3923544_0 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 301.0
YHH3_k127_3923544_3 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.00000000000000000004347 92.0
YHH3_k127_3924069_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009178 472.0
YHH3_k127_3924069_1 Nitroreductase family K09019 - - 0.000000000000000000000000000000000000000000000000000000000000000000001325 241.0
YHH3_k127_3924069_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000002627 222.0
YHH3_k127_3926206_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006071 337.0
YHH3_k127_3926206_1 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000000000000005333 196.0
YHH3_k127_3926206_2 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000007 161.0
YHH3_k127_3926206_3 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000006714 64.0
YHH3_k127_3927745_0 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 551.0
YHH3_k127_3927745_1 NAD(P)H-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008833 307.0
YHH3_k127_3927745_2 nuclear chromosome segregation K01153,K13924,K15492 - 2.1.1.80,3.1.1.61,3.1.21.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000003972 268.0
YHH3_k127_3927745_3 COG1651 Protein-disulfide isomerase - - - 0.000000000000000000000000000000000000000000000000000000000001745 216.0
YHH3_k127_3927745_4 Uroporphyrinogen III synthase K01719 - 4.2.1.75 0.00000000000000000000000000000000000000000000000001752 186.0
YHH3_k127_3927745_5 Belongs to the DsbB family K03611 - - 0.00000000000000000000000000000000000000000000007397 173.0
YHH3_k127_3927745_6 SCO1/SenC K07152 - - 0.00000000000000000000000000002076 126.0
YHH3_k127_3957013_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 1.134e-265 824.0
YHH3_k127_3957907_0 CBS-domain-containing membrane protein K07168 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009877 299.0
YHH3_k127_3957907_1 Belongs to the UPF0234 family K09767 - - 0.0000000000000000000000000000000000000000000000000000000000004758 217.0
YHH3_k127_3957907_2 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000007509 203.0
YHH3_k127_3957907_3 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.00000000000000000000000000000000000000000000003164 173.0
YHH3_k127_3957907_4 Sortase family - - - 0.000000000000000000000000000001144 124.0
YHH3_k127_3957907_5 IMP dehydrogenase activity K04767,K07182 - - 0.0000000000002254 75.0
YHH3_k127_4008998_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.734e-220 691.0
YHH3_k127_4008998_1 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000007358 168.0
YHH3_k127_4011362_0 2 iron, 2 sulfur cluster binding - - - 0.0 1331.0
YHH3_k127_4011362_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001685 278.0
YHH3_k127_4011362_2 - - - - 0.0000000000000000000000000003083 118.0
YHH3_k127_4011362_3 Predicted membrane protein (DUF2214) K08983 - - 0.00000000000000000000001102 106.0
YHH3_k127_4011362_4 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000001198 100.0
YHH3_k127_4011362_5 Belongs to the SlyX family K03745 - - 0.00000000006166 65.0
YHH3_k127_4117636_0 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 2.531e-278 874.0
YHH3_k127_4117636_1 Aminotransferase K00812 - 2.6.1.1 2.539e-232 724.0
YHH3_k127_4117636_2 lysine 2,3-aminomutase K01843 - 5.4.3.2 3.36e-228 713.0
YHH3_k127_4117636_3 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 296.0
YHH3_k127_4117636_4 phosphoserine phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001192 283.0
YHH3_k127_4117636_5 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008198 240.0
YHH3_k127_4117636_6 COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000003151 230.0
YHH3_k127_4117636_7 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000007225 193.0
YHH3_k127_4156187_0 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 462.0
YHH3_k127_4156187_1 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002694 275.0
YHH3_k127_4156187_2 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0000000000000000000000000000000000000000000862 173.0
YHH3_k127_4158497_0 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.00000000000000000000000000000000000001438 153.0
YHH3_k127_4158497_1 Psort location Extracellular, score K07126 - - 0.0000000000000000000000000547 114.0
YHH3_k127_4158497_2 - - - - 0.0000000000000007068 82.0
YHH3_k127_4185362_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000531 557.0
YHH3_k127_4185362_1 4 iron, 4 sulfur cluster binding K19339 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000004471 51.0
YHH3_k127_4209721_0 Bacterial regulatory helix-turn-helix protein, lysR family K04761 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 369.0
YHH3_k127_4209721_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005686 362.0
YHH3_k127_4209721_2 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 315.0
YHH3_k127_4209721_3 Iron-containing alcohol dehydrogenase K00001 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000007561 268.0
YHH3_k127_4209721_4 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000002383 133.0
YHH3_k127_4209721_5 Predicted membrane protein (DUF2061) - - - 0.00000000000000000001406 93.0
YHH3_k127_4215162_0 COG0845 Membrane-fusion protein K11003,K12542 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 365.0
YHH3_k127_4215162_1 PFAM WD domain, G-beta repeat - - - 0.000000000000002111 84.0
YHH3_k127_4225262_0 Belongs to the binding-protein-dependent transport system permease family K11961 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 588.0
YHH3_k127_4225262_1 Belongs to the binding-protein-dependent transport system permease family K01997,K11960 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 573.0
YHH3_k127_4225262_2 TIGRFAM urea ABC transporter, ATP-binding protein UrtD K11962 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 408.0
YHH3_k127_4225262_3 Urea short-chain amide ABC transporter, periplasmic urea short-chain amide-binding protein K11959 - - 0.0000000004579 59.0
YHH3_k127_4225262_4 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K09699 - 2.3.1.168 0.00001591 47.0
YHH3_k127_4295715_0 Circularly permuted ATP-grasp type 2 - - - 4.062e-196 619.0
YHH3_k127_4295715_1 Putative amidoligase enzyme (DUF2126) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003486 348.0
YHH3_k127_4295715_2 PFAM 20S proteasome, A and B subunits K07395 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004254 326.0
YHH3_k127_4339330_0 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000989 280.0
YHH3_k127_4339330_1 Nicotinamidase K08281 - 3.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000002028 237.0
YHH3_k127_4339330_2 Belongs to the glutathione peroxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000005535 227.0
YHH3_k127_4339330_3 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000000001333 155.0
YHH3_k127_4339330_4 Protein of unknown function (DUF1722) - - - 0.0000000000000000000000000000000000006632 141.0
YHH3_k127_4339330_5 Protein of unknown function (DUF3175) - - - 0.00000000000000000000000000002579 120.0
YHH3_k127_4345369_0 trehalohydrolase K01236 - 3.2.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002708 580.0
YHH3_k127_4345369_1 alpha amylase catalytic K05343 - 3.2.1.1,5.4.99.16 0.00000000000000138 78.0
YHH3_k127_4345369_2 - - - - 0.0000000008054 63.0
YHH3_k127_4395701_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004925 542.0
YHH3_k127_4395701_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000002082 100.0
YHH3_k127_4395701_2 - - - - 0.00004913 47.0
YHH3_k127_4446047_0 FemAB family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 484.0
YHH3_k127_4446047_1 Glycosyl transferases group 1 K00786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009932 472.0
YHH3_k127_4446047_2 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005459 402.0
YHH3_k127_4446047_3 AAA domain - - - 0.000000000000000000000000000000000000000000000000006378 186.0
YHH3_k127_4446047_4 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000001439 183.0
YHH3_k127_4446047_5 Protein of unknown function (DUF3485) - - - 0.000000000000000000000000000000002475 134.0
YHH3_k127_4452503_0 Acts as a magnesium transporter K06213 - - 1.328e-216 682.0
YHH3_k127_4452503_1 long-chain fatty acid transporting porin activity K07267 - - 0.00000000000000000000000000000000000000000009946 174.0
YHH3_k127_4452503_2 COG0226 ABC-type phosphate transport system, periplasmic component - - - 0.0000000000000000000000009873 109.0
YHH3_k127_4452503_3 - - - - 0.00000000000000000001857 95.0
YHH3_k127_4452503_4 Patatin-like phospholipase K07001 - - 0.000000000000000002798 91.0
YHH3_k127_4452503_5 Copper binding periplasmic protein CusF - - - 0.00000000001775 69.0
YHH3_k127_4463381_0 SMART Resolvase RNase H domain protein fold K06959 - - 0.0 1090.0
YHH3_k127_4482289_0 major facilitator superfamily K05820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004145 449.0
YHH3_k127_4482289_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 394.0
YHH3_k127_4482289_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 349.0
YHH3_k127_4482289_3 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003955 317.0
YHH3_k127_4482289_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006874 287.0
YHH3_k127_4482289_5 LemA Family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006207 262.0
YHH3_k127_4482289_6 Protein of unknown function (DUF2288) - - - 0.00000000000000000000000001275 113.0
YHH3_k127_4494633_0 peptidase activity, acting on L-amino acid peptides K01337,K01400,K20276 - 3.4.21.50,3.4.24.28 0.0000000000000000000000000000000000000000000000000000000000000005264 244.0
YHH3_k127_4494633_1 Putative Fe-S cluster K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000002759 213.0
YHH3_k127_4494633_2 heat shock protein binding - - - 0.00000000000000000000000000000000000000000006783 168.0
YHH3_k127_4540007_0 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 351.0
YHH3_k127_4540007_1 PFAM EAL domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 337.0
YHH3_k127_4540007_2 UPF0114 protein - - - 0.00000000000000000000000000000000000000000005283 162.0
YHH3_k127_455957_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 4.643e-217 684.0
YHH3_k127_455957_1 general secretion pathway protein D K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000001666 244.0
YHH3_k127_4598044_0 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000006693 237.0
YHH3_k127_4598044_1 Domain of unknown function (DUF4824) - - - 0.0000000000000000000000000000000000000000000000002661 186.0
YHH3_k127_4659565_0 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 321.0
YHH3_k127_4659565_1 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005996,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008690,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0019294,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046394,GO:0046400,GO:0046401,GO:0046872,GO:0070567,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000111 238.0
YHH3_k127_4669429_0 PFAM Major Facilitator Superfamily K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495 560.0
YHH3_k127_4669429_1 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004291 432.0
YHH3_k127_4669429_2 Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine K00772,K19696 - 2.4.2.28,2.4.2.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000008759 257.0
YHH3_k127_4669429_3 phosphoribosyltransferase K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000001696 222.0
YHH3_k127_4669429_4 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000001186 218.0
YHH3_k127_4669429_5 DsrE/DsrF-like family - - - 0.000000000000000000002191 100.0
YHH3_k127_4747873_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 1.106e-293 912.0
YHH3_k127_4747873_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 443.0
YHH3_k127_4747873_2 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 417.0
YHH3_k127_4747873_3 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000002029 183.0
YHH3_k127_4747873_4 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000272 156.0
YHH3_k127_4747873_5 Clan AA aspartic protease K06985 - - 0.0000000000000000000000000000000000000128 153.0
YHH3_k127_4759311_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily K06968 - 2.1.1.186 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 376.0
YHH3_k127_4759311_1 THUMP K07444,K12297 - 2.1.1.173,2.1.1.264 0.000000000000000000095 93.0
YHH3_k127_4764074_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 8.133e-242 751.0
YHH3_k127_4764074_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0000000003937 61.0
YHH3_k127_4777964_0 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 332.0
YHH3_k127_4777964_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01539 - 3.6.3.9 0.0000000000000000000000000000000000000000000000000000000000000001642 225.0
YHH3_k127_480867_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 602.0
YHH3_k127_480867_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 383.0
YHH3_k127_480867_2 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. RlmB subfamily K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001486 270.0
YHH3_k127_480867_3 Binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000000000000000001374 195.0
YHH3_k127_480867_4 membrane - - - 0.0000000000000000000000000000000000000000000000004119 187.0
YHH3_k127_480867_5 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000004655 173.0
YHH3_k127_480867_6 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000006293 126.0
YHH3_k127_4856087_0 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 568.0
YHH3_k127_4856087_1 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 355.0
YHH3_k127_4870444_0 Glycine cleavage system T protein K00605 GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 475.0
YHH3_k127_4870444_1 CHASE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 448.0
YHH3_k127_4870444_2 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004006 372.0
YHH3_k127_4870444_3 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008764 310.0
YHH3_k127_4870444_4 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 GO:0001505,GO:0003674,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0017144,GO:0019464,GO:0019752,GO:0031405,GO:0031406,GO:0033293,GO:0036094,GO:0042133,GO:0042135,GO:0042737,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0048037,GO:0050662,GO:0065007,GO:0065008,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1901681 - 0.0000000000000000000000000000000000000000000001066 172.0
YHH3_k127_4870444_5 Glycine cleavage system P-protein K00282 - 1.4.4.2 0.000000000000000000000000000000000000000000006454 164.0
YHH3_k127_4870444_6 - - - - 0.0000000000000000000000000000002158 126.0
YHH3_k127_4870444_7 - - - - 0.0000000005313 69.0
YHH3_k127_4897991_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1000.0
YHH3_k127_4914408_0 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003612 449.0
YHH3_k127_4914408_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.00000000000000000000000000000000003881 137.0
YHH3_k127_4914408_2 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.00000000000000000001582 93.0
YHH3_k127_4919469_0 repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000708 593.0
YHH3_k127_4919469_1 TIGRFAM Flagellar hook-associated protein, FlgK K02396 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006712 526.0
YHH3_k127_4919469_10 Flagellar rod assembly protein muramidase FlgJ K02395 - - 0.000000000000000000162 93.0
YHH3_k127_4919469_11 FlaG protein K06603 - - 0.0000000001858 67.0
YHH3_k127_4919469_12 Flagellar protein FliT K02423 - - 0.0000001824 58.0
YHH3_k127_4919469_2 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008596 481.0
YHH3_k127_4919469_3 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 418.0
YHH3_k127_4919469_4 Flagella basal body rod protein K02392 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 372.0
YHH3_k127_4919469_5 Belongs to the bacterial flagellin family K02397 - - 0.0000000000000000000000000000000000000000000000000000000000002322 222.0
YHH3_k127_4919469_6 TIGRFAM flagellar basal-body rod protein FlgF K02391 - - 0.0000000000000000000000000000000000000000000000000000000000002777 215.0
YHH3_k127_4919469_7 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.0000000000000000000000000000000000000000000000000000000000006516 217.0
YHH3_k127_4919469_8 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.00000000000000000000000000000000000000000000000000003981 195.0
YHH3_k127_4919469_9 Flagellar protein FliS K02422 - - 0.000000000000000000000000000000000003709 140.0
YHH3_k127_4920520_0 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004013 352.0
YHH3_k127_4920520_1 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000005962 171.0
YHH3_k127_4920520_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 GO:0000166,GO:0003674,GO:0003824,GO:0004632,GO:0004633,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0010181,GO:0015936,GO:0015937,GO:0016829,GO:0016830,GO:0016831,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032553,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.1.1.36,6.3.2.5 0.00000007043 56.0
YHH3_k127_4928416_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003009 529.0
YHH3_k127_4928416_1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000005573 213.0
YHH3_k127_4928416_2 Signal transduction protein K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000009993 168.0
YHH3_k127_4928416_3 alpha-ribazole phosphatase activity - - - 0.000000000000000000000000000000002031 131.0
YHH3_k127_4928416_4 Putative transposase - - - 0.00001324 50.0
YHH3_k127_4934956_0 SpoVR family - - - 4.453e-253 787.0
YHH3_k127_4934956_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K13490 - - 6.141e-209 672.0
YHH3_k127_4934956_2 diguanylate cyclase K07315,K11444 - 2.7.7.65,3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009061 373.0
YHH3_k127_4934956_3 Belongs to the UPF0229 family K09786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003359 352.0
YHH3_k127_4934956_4 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13491 - 3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 312.0
YHH3_k127_4934956_5 chemotaxis K03408,K13486,K13489 - - 0.0000000000000000000000000000000000000000000000003161 184.0
YHH3_k127_4934956_6 PFAM CheR methyltransferase, SAM binding domain K13486 - - 0.000000000000000005186 88.0
YHH3_k127_4938087_0 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 6.238e-208 651.0
YHH3_k127_4938087_1 Methionine biosynthesis protein MetW - - - 0.00000008111 53.0
YHH3_k127_4939276_0 PFAM glycosyl transferase family 35 K00688 - 2.4.1.1 0.0 1093.0
YHH3_k127_4939276_1 HD domain - - - 3.359e-204 649.0
YHH3_k127_4939276_2 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 599.0
YHH3_k127_4939276_3 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000006259 248.0
YHH3_k127_498710_0 type I secretion outer membrane protein, TolC K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004182 324.0
YHH3_k127_498710_1 Belongs to the peptidase S8 family K14645 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001365 263.0
YHH3_k127_5009382_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 1.788e-230 722.0
YHH3_k127_5009382_1 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000000000000000000000003562 216.0
YHH3_k127_5009382_2 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.00000000000000000000000001544 109.0
YHH3_k127_5009382_3 - - - - 0.00000000000000006615 83.0
YHH3_k127_5009382_4 Diguanylate cyclase - - - 0.00000000002082 70.0
YHH3_k127_5017364_0 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000005475 276.0
YHH3_k127_5017364_1 PFAM binding-protein-dependent transport systems inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000001029 229.0
YHH3_k127_5038281_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1471.0
YHH3_k127_5038281_1 Membrane - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000007865 227.0
YHH3_k127_5038281_2 Mannose-6-phosphate isomerase - - - 0.00000000000000000000000000000000000000000000000005628 180.0
YHH3_k127_5038281_3 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000002839 162.0
YHH3_k127_5038281_4 - - - - 0.0003039 45.0
YHH3_k127_5038841_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 2.893e-227 723.0
YHH3_k127_5038841_1 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004888 350.0
YHH3_k127_5038841_2 subfamily IA, variant 1 K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000004948 252.0
YHH3_k127_5038841_3 PFAM peptidase S49 K04773 - - 0.00000000000000000000000000000000000000003174 158.0
YHH3_k127_5081312_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 5.157e-283 883.0
YHH3_k127_5081312_1 4Fe-4S dicluster domain - - - 1.331e-268 832.0
YHH3_k127_5081312_2 Nitrate reductase gamma subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005469 341.0
YHH3_k127_5081312_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000865 337.0
YHH3_k127_5081312_4 - - - - 0.000000000000000000000000000000007892 135.0
YHH3_k127_5081312_5 Polysulphide reductase, NrfD K00185 - - 0.00000000001892 65.0
YHH3_k127_5099138_0 ROK family K00845,K00847,K00884 - 2.7.1.2,2.7.1.4,2.7.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 421.0
YHH3_k127_5099138_1 S-layer homology domain - - - 0.0003673 53.0
YHH3_k127_5118461_0 Methyl-accepting chemotaxis protein (MCP) signaling domain K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 293.0
YHH3_k127_5118461_1 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000000000000000001943 200.0
YHH3_k127_5118461_2 Signal transduction histidine kinase K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000005666 169.0
YHH3_k127_5193736_0 PFAM DEAD DEAH box helicase domain protein K05591 GO:0000339,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003725,GO:0003729,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006412,GO:0006413,GO:0006518,GO:0006725,GO:0006807,GO:0008026,GO:0008135,GO:0008150,GO:0008152,GO:0008186,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010468,GO:0010501,GO:0016070,GO:0016281,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019222,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0042623,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0060255,GO:0065007,GO:0070035,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 3.6.4.13 2.453e-198 620.0
YHH3_k127_5193736_1 Class III cytochrome C family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 409.0
YHH3_k127_5222840_0 type II secretion system protein E K02454,K02652,K12276 - - 1.554e-220 692.0
YHH3_k127_5222840_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000004969 153.0
YHH3_k127_5226773_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006276,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0010332,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042221,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0046677,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 - 0.000000000000000000000001059 106.0
YHH3_k127_5226773_1 - - - - 0.000000000000000004147 95.0
YHH3_k127_5226773_2 Atypical PilZ domain, cyclic di-GMP receptor - - - 0.00000000000000002784 89.0
YHH3_k127_5226773_3 - - - - 0.00000000000000002947 84.0
YHH3_k127_5247382_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007269 492.0
YHH3_k127_5247382_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003881 452.0
YHH3_k127_5247382_2 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000000006286 102.0
YHH3_k127_5247382_3 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000002026 73.0
YHH3_k127_5259651_0 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K00567,K01247 - 2.1.1.63,3.2.2.21 0.0000000000000000000000000000000000000000000000000000003892 202.0
YHH3_k127_5283273_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 4.69e-202 639.0
YHH3_k127_5283273_1 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005247 531.0
YHH3_k127_5283273_2 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 385.0
YHH3_k127_5283273_3 HAD-hyrolase-like K01091 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0031404,GO:0033554,GO:0034641,GO:0042578,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 332.0
YHH3_k127_5283273_4 with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 327.0
YHH3_k127_5283273_5 COG0303 Molybdopterin biosynthesis enzyme K03750 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006464,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0018315,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0032324,GO:0034641,GO:0036211,GO:0042040,GO:0042278,GO:0042802,GO:0043170,GO:0043412,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061598,GO:0061599,GO:0070566,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003485 290.0
YHH3_k127_5283273_6 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000001727 255.0
YHH3_k127_5283273_7 Copper resistance protein D - - - 0.0000000000000000000000000000000000000000000000000000007237 197.0
YHH3_k127_5283273_8 Protochlamydia outer membrane protein - - - 0.00000000000000000000000000000000000000001617 165.0
YHH3_k127_530876_0 Dynamin family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 573.0
YHH3_k127_530876_1 Belongs to the UPF0235 family K09131 - - 0.0000000000000000004082 88.0
YHH3_k127_530876_2 oligosaccharyl transferase activity - - - 0.0000000002346 72.0
YHH3_k127_5321142_0 5'-nucleotidase, C-terminal domain K01119 - 3.1.3.6,3.1.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005466 437.0
YHH3_k127_5321142_1 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000005877 261.0
YHH3_k127_5326834_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 348.0
YHH3_k127_5326834_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 330.0
YHH3_k127_5326834_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 292.0
YHH3_k127_5326834_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000005694 194.0
YHH3_k127_5326834_4 PFAM Preprotein translocase SecG subunit K03075 - - 0.00000000000000000000001905 105.0
YHH3_k127_5335596_0 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 546.0
YHH3_k127_5335596_1 lactoylglutathione lyase activity - - - 0.0000000000159 68.0
YHH3_k127_5357603_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 308.0
YHH3_k127_5357603_1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.0000000000000000000000001544 106.0
YHH3_k127_5374200_0 PFAM glycosyl transferase family 39 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 425.0
YHH3_k127_5374200_1 Flagellar Assembly Protein A K09749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008516 316.0
YHH3_k127_5374200_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000005692 211.0
YHH3_k127_5374200_3 Bacterial regulatory helix-turn-helix protein, lysR family K13634 - - 0.0000000000000000000000000000000000000004271 156.0
YHH3_k127_5379604_0 Protein of unknown function DUF86 - - - 0.0000000000000000000000000000000000006548 143.0
YHH3_k127_5379604_1 Protein of unknown function (DUF504) - - - 0.00000000000000000000000000001799 121.0
YHH3_k127_5379604_2 Phytochelatin synthase - - - 0.000000000000000000000952 102.0
YHH3_k127_5379604_3 Nucleotidyltransferase domain K07075 - - 0.00000000000000000341 88.0
YHH3_k127_5379604_4 domain protein - - - 0.0000000000002283 80.0
YHH3_k127_544885_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 1.168e-300 933.0
YHH3_k127_544885_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 3.612e-297 920.0
YHH3_k127_544885_10 PFAM Metal-dependent hydrolase HDOD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001239 251.0
YHH3_k127_544885_11 Sigma factor RpoE negative regulatory protein RseB K03598 - - 0.000000000000000000000000000000000000000000000000000000000001153 221.0
YHH3_k127_544885_12 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000001123 189.0
YHH3_k127_544885_13 TIGRFAM Succinate dehydrogenase, cytochrome b556 subunit K00241 - - 0.0000000000000000000000007529 108.0
YHH3_k127_544885_14 PFAM Anti sigma-E protein RseA K03597 - - 0.000000000000000000001393 101.0
YHH3_k127_544885_15 Domain of unknown function (DUF4845) - - - 0.00000000000000006966 85.0
YHH3_k127_544885_16 succinate dehydrogenase activity K00242 GO:0000104,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0016999,GO:0017004,GO:0017144,GO:0019752,GO:0020037,GO:0022607,GO:0022900,GO:0032991,GO:0034622,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0065003,GO:0070469,GO:0070470,GO:0071704,GO:0071840,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901363,GO:1902494,GO:1990204 - 0.000000000000002829 80.0
YHH3_k127_544885_17 - K19168 - - 0.0000000000002498 76.0
YHH3_k127_544885_18 An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH K09159 GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006105,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016043,GO:0016999,GO:0017013,GO:0017144,GO:0018065,GO:0018293,GO:0019538,GO:0019752,GO:0022607,GO:0034552,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0043648,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0045333,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072350,GO:1901564 - 0.0000000006747 63.0
YHH3_k127_544885_19 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K09699 - 2.3.1.168 0.00004754 45.0
YHH3_k127_544885_2 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 4.654e-251 784.0
YHH3_k127_544885_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004571 543.0
YHH3_k127_544885_4 COG0479 Succinate dehydrogenase fumarate reductase, Fe-S protein subunit K00240 GO:0000104,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0022904,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 389.0
YHH3_k127_544885_5 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009898,GO:0009987,GO:0016020,GO:0016310,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0019843,GO:0019897,GO:0019898,GO:0022613,GO:0031234,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0036211,GO:0042254,GO:0042274,GO:0043021,GO:0043024,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044877,GO:0046777,GO:0070181,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006471 389.0
YHH3_k127_544885_6 Belongs to the GcvT family K06980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 350.0
YHH3_k127_544885_7 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 323.0
YHH3_k127_544885_8 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005626 279.0
YHH3_k127_544885_9 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000000158 250.0
YHH3_k127_5471050_0 Binding-protein-dependent transport system inner membrane component K02011 - - 5.909e-203 646.0
YHH3_k127_5471050_1 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0042254,GO:0042255,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0065003,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 520.0
YHH3_k127_5471050_2 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005339 473.0
YHH3_k127_5471050_3 GGDEF domain - - - 0.0000000000000000000000000000000000000000005702 174.0
YHH3_k127_5471768_0 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000000000000000000009674 214.0
YHH3_k127_5471768_1 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000002287 174.0
YHH3_k127_5471768_2 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.000000000000007913 76.0
YHH3_k127_54995_0 COG0514 Superfamily II DNA helicase K03654 - 3.6.4.12 1.162e-202 638.0
YHH3_k127_54995_1 Diguanylate cyclase - - - 0.00000000000003146 80.0
YHH3_k127_549990_0 ABC transporter K15738 - - 5.627e-235 742.0
YHH3_k127_549990_1 TIGRFAM ATP-dependent DNA helicase, RecQ K03654 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 494.0
YHH3_k127_549990_2 HDOD domain K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009784 285.0
YHH3_k127_549990_3 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.000000000000000000000000000001222 126.0
YHH3_k127_549990_4 transmembrane signaling receptor activity - - - 0.000000000000000000009543 100.0
YHH3_k127_553516_0 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 476.0
YHH3_k127_553516_1 PFAM Integrase core domain - - - 0.00000000000000000000000000000000000000000000008947 169.0
YHH3_k127_5546000_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.134e-203 640.0
YHH3_k127_5546000_1 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005135 348.0
YHH3_k127_5546000_2 Protein of unknown function (DUF1697) - - - 0.00000000000000000000000000000000000000000000000000000003068 201.0
YHH3_k127_5546000_3 Protein conserved in bacteria K09984 - - 0.00000000000000000000000000000000000000000000001359 172.0
YHH3_k127_5546000_4 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 0.000000001181 61.0
YHH3_k127_5622038_0 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 537.0
YHH3_k127_5622038_1 Domain of unknown function (DUF3362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 326.0
YHH3_k127_5622038_2 PFAM Auxin Efflux Carrier K07088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005413 315.0
YHH3_k127_5622038_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000002696 241.0
YHH3_k127_5622038_4 Cold shock K03704 - - 0.0000000000000000000000006451 109.0
YHH3_k127_5622038_5 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.00000000000000000000003472 105.0
YHH3_k127_5630966_0 Thermolysin metallopeptidase, catalytic domain K01400 - 3.4.24.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 302.0
YHH3_k127_5631343_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 526.0
YHH3_k127_5631343_1 transcriptional - - - 0.000000000000000000000000000000000000000000000000000000003753 200.0
YHH3_k127_5631343_2 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000881 158.0
YHH3_k127_5644179_0 signal transduction protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000006068 244.0
YHH3_k127_5644179_1 ABC transporter, ATP-binding protein K02003 - - 0.00000000000000000000000000004068 121.0
YHH3_k127_5644179_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000004629 106.0
YHH3_k127_5644179_3 Outer membrane protein beta-barrel domain - - - 0.00000000000000003912 89.0
YHH3_k127_5644179_4 Transcriptional regulatory protein, C terminal - - - 0.0000007817 63.0
YHH3_k127_5644612_0 Phosphotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 344.0
YHH3_k127_5644612_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003315 242.0
YHH3_k127_5644612_2 TPR repeat - - - 0.000000002264 66.0
YHH3_k127_5646462_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 6.14e-300 931.0
YHH3_k127_5646462_1 Sel1-like repeats. K07126 - - 0.00000000000000000000000000000000000001235 153.0
YHH3_k127_5646462_2 nucleotide catabolic process - - - 0.00000000000005347 77.0
YHH3_k127_5655856_0 ABC-type nitrate sulfonate bicarbonate transport system ATPase component K02049,K15555 - - 0.00000000000000000000000000000000000000000000000000000000000000003633 233.0
YHH3_k127_5655856_1 AIR synthase related protein, N-terminal domain K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000005379 200.0
YHH3_k127_5655856_2 NMT1-like family K02051 - - 0.000000000000000000000000000000004395 141.0
YHH3_k127_5655856_3 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050,K15554 - - 0.000005945 49.0
YHH3_k127_5657832_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 404.0
YHH3_k127_5657832_1 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000009679 141.0
YHH3_k127_5657832_2 TIGRFAM cold shock domain protein CspD K03704 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006275,GO:0006355,GO:0006950,GO:0008150,GO:0008156,GO:0009266,GO:0009409,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009991,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031667,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000006792 97.0
YHH3_k127_5657832_3 Evidence 4 Homologs of previously reported genes of K18912 - 1.14.99.50 0.00000000000000000001992 98.0
YHH3_k127_5664801_0 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0042597,GO:0043170,GO:0044425,GO:0044459,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 401.0
YHH3_k127_5664801_1 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000002437 245.0
YHH3_k127_5697961_0 Helicase K03724 - - 1.945e-272 864.0
YHH3_k127_572258_0 TIGRFAM 2-methylcitrate synthase citrate synthase II K01659 - 2.3.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009389 576.0
YHH3_k127_572258_1 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K01841,K03417 - 4.1.3.30,5.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 424.0
YHH3_k127_5725680_0 modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 303.0
YHH3_k127_5725680_1 PQ loop repeat K15383 - - 0.00000000000000000000000587 103.0
YHH3_k127_5725680_2 PFAM pentapeptide repeat protein - - - 0.000000000000001273 86.0
YHH3_k127_5761790_0 Allophanate hydrolase subunit 1 K01941 - 6.3.4.6 2.11e-315 981.0
YHH3_k127_5761790_1 TIGRFAM Urea carboxylase-associated protein 1 K09967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005922 346.0
YHH3_k127_5761790_2 TIGRFAM Urea carboxylase-associated protein 2 K09967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 324.0
YHH3_k127_5774566_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 462.0
YHH3_k127_5774566_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 311.0
YHH3_k127_5774566_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001351 243.0
YHH3_k127_5785620_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1369.0
YHH3_k127_5785620_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000000000000009833 96.0
YHH3_k127_5787653_0 HlyD membrane-fusion protein of T1SS K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002023 270.0
YHH3_k127_5787653_1 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000003135 182.0
YHH3_k127_5789744_0 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 1.678e-228 716.0
YHH3_k127_5789744_1 PFAM molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005643 292.0
YHH3_k127_5789744_2 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000004587 222.0
YHH3_k127_5789744_3 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000000000000000000000000000000001717 197.0
YHH3_k127_5789744_4 - - - - 0.0000000000000000000000000000000002686 135.0
YHH3_k127_5789744_5 - - - - 0.00000000000000000008989 91.0
YHH3_k127_5810912_0 Cytochrome c - - - 5.593e-254 791.0
YHH3_k127_5825690_0 NADH-quinone oxidoreductase K00336 - 1.6.5.3 9.799e-217 684.0
YHH3_k127_5825690_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 439.0
YHH3_k127_5851967_0 PFAM Thermolysin metallopeptidase, alpha-helical domain - - - 0.000000000000000000000000000000000000000006184 175.0
YHH3_k127_5851967_1 Specifically methylates the guanosine in position 1516 of 16S rRNA K15984 - 2.1.1.242 0.000000000000000000000000000000000002828 141.0
YHH3_k127_5851967_2 pyrroloquinoline quinone binding - - - 0.000000000000000001062 94.0
YHH3_k127_5851967_3 PFAM Thermolysin metallopeptidase, alpha-helical domain - - - 0.000000000002032 75.0
YHH3_k127_5858115_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1189.0
YHH3_k127_5858115_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 8.763e-217 681.0
YHH3_k127_5858115_10 - - - - 0.00000000001071 73.0
YHH3_k127_5858115_2 peptidylprolyl isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005686 450.0
YHH3_k127_5858115_3 PFAM carbohydrate kinase K00854 - 2.7.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000001054 255.0
YHH3_k127_5858115_4 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000008016 219.0
YHH3_k127_5858115_5 Belongs to the SOS response-associated peptidase family - - - 0.00000000000000000000000000000000000000000000000000000000002402 212.0
YHH3_k127_5858115_6 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.0000000000000000000000000000000000000000000000000000001245 199.0
YHH3_k127_5858115_7 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000004128 195.0
YHH3_k127_5858115_8 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000004506 134.0
YHH3_k127_5858115_9 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000001216 128.0
YHH3_k127_5871516_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 2.753e-261 819.0
YHH3_k127_5871516_1 Glycosyltransferase like family 2 K20444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002809 252.0
YHH3_k127_5871516_2 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.000000000000000000000000000000000000000008977 163.0
YHH3_k127_5871516_3 PFAM polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000006408 145.0
YHH3_k127_5871516_4 Phosphopantetheine attachment site - - - 0.00000000000000000000000009263 108.0
YHH3_k127_5871516_5 GtrA-like protein - - - 0.000000000000000000000009953 108.0
YHH3_k127_5909582_0 domain, Protein - - - 0.00000000000000000000000000000000000000000000000002417 190.0
YHH3_k127_5909582_1 pyrroloquinoline quinone binding - - - 0.00000000000009916 79.0
YHH3_k127_5909630_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 425.0
YHH3_k127_5909630_1 Concanavalin A-like lectin/glucanases superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 396.0
YHH3_k127_5909630_2 radical SAM protein YgiQ - - - 0.00000000000000000000000000000000000000000000000000000000000000003196 225.0
YHH3_k127_5909630_3 - - - - 0.000002238 51.0
YHH3_k127_593052_0 PFAM CheW domain protein K03408 - - 0.000000000000000000000000000000000000000000000000000000000001124 213.0
YHH3_k127_593052_1 Chemotaxis protein cheW K03408 - - 0.0000000000001915 79.0
YHH3_k127_593052_2 homolog of the cytoplasmic domain of flagellar protein FhlB K04061 - - 0.000001235 51.0
YHH3_k127_593052_3 Protein of unknown function (DUF2802) - - - 0.000007687 54.0
YHH3_k127_5952292_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1096.0
YHH3_k127_5952654_0 alpha beta - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 600.0
YHH3_k127_5952654_1 PFAM SNARE associated Golgi protein K03975 - - 0.000000000000000000000000000000000000000005145 166.0
YHH3_k127_59582_0 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 575.0
YHH3_k127_59582_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 458.0
YHH3_k127_59582_2 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 307.0
YHH3_k127_59582_3 Peptidase M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001067 259.0
YHH3_k127_6019903_0 Inorganic H+ pyrophosphatase K15987 - 3.6.1.1 4.256e-250 781.0
YHH3_k127_6019903_1 Gliding motility protein GldG - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 555.0
YHH3_k127_6019903_2 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004843 368.0
YHH3_k127_6019903_3 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 353.0
YHH3_k127_6019903_4 PFAM Phosphoglycerate mutase K02226 - 3.1.3.73 0.0000000000000000000000000000000000000000000000000000000000000000000000000000426 263.0
YHH3_k127_6019903_5 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009647 259.0
YHH3_k127_6019903_6 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000471 172.0
YHH3_k127_6019903_7 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000003443 136.0
YHH3_k127_6019903_8 Domain of unknown function (DUF4340) - - - 0.000000000000000000000000000000009103 141.0
YHH3_k127_6023118_0 His Kinase A (phosphoacceptor) domain - - - 2.918e-264 826.0
YHH3_k127_6035948_0 PFAM Aminotransferase class I and II K14261 - - 5.12e-221 689.0
YHH3_k127_6035948_1 homoserine dehydrogenase K00003 - 1.1.1.3 3.02e-203 640.0
YHH3_k127_6035948_2 threonine synthase K01733 - 4.2.3.1 6.439e-195 619.0
YHH3_k127_6035948_3 Belongs to the UPF0502 family K09915 - - 0.000000000000000000000000000000000000000000000000000000000001819 216.0
YHH3_k127_6035948_4 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000007853 170.0
YHH3_k127_6035948_5 NERD domain protein - - - 0.00000000000000000000000000009705 123.0
YHH3_k127_6035948_6 Protein of unknown function (DUF498/DUF598) - - - 0.00000000000000000000000001361 119.0
YHH3_k127_6065641_0 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000941 613.0
YHH3_k127_6065641_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000001606 104.0
YHH3_k127_606868_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 4.383e-303 934.0
YHH3_k127_606868_1 phosphoserine phosphatase K02203 - 2.7.1.39,3.1.3.3 0.00000000000000000000000000000000000000000000000000000000001162 209.0
YHH3_k127_609761_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031 400.0
YHH3_k127_609761_1 PFAM SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009837 288.0
YHH3_k127_609761_2 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001221 278.0
YHH3_k127_609761_3 Putative diguanylate phosphodiesterase - - - 0.000000003358 58.0
YHH3_k127_6107731_0 Glycosyl transferase 4-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 362.0
YHH3_k127_6107731_1 Male sterility protein K00091,K01784 - 1.1.1.219,5.1.3.2 0.00000000000000000000000000000000007527 137.0
YHH3_k127_6114006_0 Protein tyrosine kinase K12132 - 2.7.11.1 2.537e-218 706.0
YHH3_k127_6114006_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001731 273.0
YHH3_k127_6114006_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000001305 232.0
YHH3_k127_6114006_3 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000001397 236.0
YHH3_k127_6114006_4 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000009066 192.0
YHH3_k127_6114006_5 (FHA) domain - - - 0.000000000000000000000000000000000000000000000000005946 188.0
YHH3_k127_6114006_6 Nucleotidyltransferase domain K07075 - - 0.0000000000000000000000000000000000003865 142.0
YHH3_k127_6114006_7 Protein of unknown function DUF86 - - - 0.00000000000000000000000000000000002427 139.0
YHH3_k127_6114006_8 Alpha/beta hydrolase family - - - 0.00000000000000005561 83.0
YHH3_k127_6120244_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.549e-311 962.0
YHH3_k127_6120244_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 477.0
YHH3_k127_6120244_2 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.000000000146 62.0
YHH3_k127_6164374_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006520,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016884,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 573.0
YHH3_k127_6164374_1 Methyl-accepting chemotaxis protein K03406 - - 0.00000000000000003386 83.0
YHH3_k127_6198331_0 Non-ribosomal peptide synthetase modules and related protein - - - 1.986e-203 645.0
YHH3_k127_6198331_1 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005011 454.0
YHH3_k127_6198331_2 Sporulation related domain - - - 0.00000000000000000000000000000002213 133.0
YHH3_k127_6198331_3 Flavin containing amine oxidoreductase - - - 0.000000000000000000009227 93.0
YHH3_k127_62266_0 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006472 444.0
YHH3_k127_62266_1 Isochorismatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 399.0
YHH3_k127_62266_2 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000003709 111.0
YHH3_k127_6235902_0 Extracellular solute-binding protein - - - 1.082e-271 845.0
YHH3_k127_6235902_1 Oligopeptide transport system permease protein OppB K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 466.0
YHH3_k127_6243718_0 type IV pilus secretin PilQ K02666 - - 5.829e-215 686.0
YHH3_k127_6243718_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000281 482.0
YHH3_k127_6243718_2 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000000000000000000000000000000000001564 199.0
YHH3_k127_6244192_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 2.322e-208 660.0
YHH3_k127_6244192_1 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006537 576.0
YHH3_k127_6244192_2 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 379.0
YHH3_k127_6244192_3 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 310.0
YHH3_k127_6244192_4 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 312.0
YHH3_k127_6244192_5 Peptidase m48 ste24p - - - 0.00000000000000000000000000000000000000000000000000000002986 206.0
YHH3_k127_6244192_6 Staphylococcal nuclease homologues - - - 0.0000000000000000000023 102.0
YHH3_k127_6244192_7 Bacterial SH3 domain - - - 0.000000000002257 75.0
YHH3_k127_625808_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.269e-231 721.0
YHH3_k127_625808_1 Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) K08964 - 4.2.1.109 0.00000000000000000000000000000000000000000000000000000000009183 211.0
YHH3_k127_625808_2 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000000000000001218 198.0
YHH3_k127_625808_3 Diguanylate cyclase K02488 - 2.7.7.65 0.00000000000000000000000000000000000000001741 158.0
YHH3_k127_625808_4 Ankyrin repeats (many copies) - - - 0.000000000000000000008523 102.0
YHH3_k127_625808_5 Cytochrome c7 and related cytochrome c - - - 0.00002161 46.0
YHH3_k127_626718_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1194.0
YHH3_k127_626718_1 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000000000007073 226.0
YHH3_k127_626718_2 PFAM carbohydrate kinase K00854 - 2.7.1.17 0.000000000000000000000000000001001 124.0
YHH3_k127_6268851_0 AAA domain K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 476.0
YHH3_k127_6268851_1 Histidine kinase K07673 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 341.0
YHH3_k127_6268851_2 response regulator receiver K07684 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000636 274.0
YHH3_k127_6268851_3 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000001465 104.0
YHH3_k127_6268851_4 Diguanylate cyclase K21021 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0008150,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0032153,GO:0032879,GO:0033554,GO:0036460,GO:0040012,GO:0040013,GO:0042802,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051270,GO:0051271,GO:0051716,GO:0052621,GO:0065007,GO:0071944,GO:1902021,GO:1902201,GO:2000145,GO:2000146 2.7.7.65 0.0003164 52.0
YHH3_k127_627396_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007241 554.0
YHH3_k127_627396_1 protein conserved in bacteria K09859 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005061 326.0
YHH3_k127_627396_2 Peptidoglycan-synthase activator LpoB K07337 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002517 246.0
YHH3_k127_627396_3 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000001177 209.0
YHH3_k127_627396_4 LPP20 lipoprotein - - - 0.000000000000000000000000000000000000000000000002487 186.0
YHH3_k127_627396_5 LPP20 lipoprotein - - - 0.0000000000000000000000000000001503 131.0
YHH3_k127_627396_6 outer membrane lipoprotein - - - 0.000000000000000002481 93.0
YHH3_k127_627396_7 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.0000000000000523 77.0
YHH3_k127_627396_8 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.0000178 56.0
YHH3_k127_6322267_0 Aldo keto - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 379.0
YHH3_k127_6322267_1 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.0000000000000000000000000000000000000000000000003633 178.0
YHH3_k127_633712_0 Aldehyde K07303 - 1.3.99.16 1.69e-271 854.0
YHH3_k127_633712_1 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000007045 113.0
YHH3_k127_6378668_0 C-methyltransferase C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006533 402.0
YHH3_k127_6378668_1 NAD dependent epimerase/dehydratase family K19180 - 1.1.1.339 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003228 275.0
YHH3_k127_6378668_2 C-methyltransferase C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000005157 235.0
YHH3_k127_6378668_3 NAD dependent epimerase/dehydratase family K19180 - 1.1.1.339 0.0000000000000000000002405 100.0
YHH3_k127_6419339_0 MMPL family K07003 - - 2.062e-274 866.0
YHH3_k127_6419339_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 411.0
YHH3_k127_6419339_2 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006942 326.0
YHH3_k127_6419339_3 Bacterial transcriptional repressor C-terminal - - - 0.0000001749 55.0
YHH3_k127_6419339_4 DNA ligase K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00006711 46.0
YHH3_k127_6429157_0 FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006333 441.0
YHH3_k127_6429157_1 Domain of Unknown Function (DUF349) - - - 0.000000000000000000000000000000009901 134.0
YHH3_k127_6437121_0 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 324.0
YHH3_k127_6437121_1 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 300.0
YHH3_k127_6439820_0 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 450.0
YHH3_k127_6439820_1 The M ring may be actively involved in energy transduction K02409 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 423.0
YHH3_k127_6439820_2 Flagellar assembly protein FliH K02411 - - 0.00000000000000000000000000000000000000000000003938 177.0
YHH3_k127_6439820_3 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10943 - - 0.00000000000000000000000007575 110.0
YHH3_k127_6439820_4 PFAM Flagellar hook-basal body complex protein FliE K02408 - - 0.000000000000000000000004697 104.0
YHH3_k127_6439820_5 Flagellar protein export ATPase FliI K02412 - 3.6.3.14 0.0000001802 53.0
YHH3_k127_6458465_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 2.046e-223 698.0
YHH3_k127_6458465_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.00000000000000000000000000000000000000000000009055 170.0
YHH3_k127_6472829_0 PFAM AIR synthase related protein domain protein K04655 - - 2.928e-200 627.0
YHH3_k127_6472829_1 TIGRFAM hydrogenase expression formation protein HypD K04654 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006769 591.0
YHH3_k127_6472829_2 Bacterial regulatory protein, Fis family K19641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 512.0
YHH3_k127_6475038_0 Belongs to the UPF0176 family K07146 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002896 349.0
YHH3_k127_6475038_1 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001503 244.0
YHH3_k127_6475038_2 Tetratricopeptide repeat - - - 0.00000000000000003238 84.0
YHH3_k127_6493524_0 Domain of unknown function(DUF2779) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 404.0
YHH3_k127_6493524_1 Nucleotidyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000004044 199.0
YHH3_k127_6493524_2 Belongs to the UPF0149 family K07039 - - 0.000000000000000000000000000000000000000000000003883 181.0
YHH3_k127_6493524_3 - - - - 0.00000000000000000000000000000008818 129.0
YHH3_k127_6493524_4 Transposase - - - 0.0005081 44.0
YHH3_k127_652604_0 Bacterial protein of unknown function (DUF839) K07093 - - 1.242e-195 622.0
YHH3_k127_652604_1 Protein of unknown function, DUF481 K07283 - - 0.00000000000000000000000000000000000000000000000000001168 198.0
YHH3_k127_652604_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008855,GO:0009056,GO:0009057,GO:0009318,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575,GO:1902494 3.1.11.6 0.0000000000000000001078 91.0
YHH3_k127_6527808_0 signal transduction histidine kinase K07637 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003528 367.0
YHH3_k127_6527808_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 323.0
YHH3_k127_6527808_10 rho-dependent transcription termination K19000 - - 0.0003385 50.0
YHH3_k127_6527808_2 Belongs to the peptidase S11 family K07262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 304.0
YHH3_k127_6527808_3 PFAM Response regulator receiver domain K07660 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 292.0
YHH3_k127_6527808_4 MMPL family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001649 241.0
YHH3_k127_6527808_5 PFAM Histidine triad (HIT) protein K02503 - - 0.00000000000000000000000000000000000000000000000002366 181.0
YHH3_k127_6527808_6 Protein of unknown function (DUF615) K09889 - - 0.000000000000000000000000000000000000013 149.0
YHH3_k127_6527808_7 PFAM cytochrome c, class I K08738 - - 0.0000000000000000000000000001493 121.0
YHH3_k127_6527808_8 sequence-specific DNA binding K13280 - 3.4.21.89 0.00000000000000006632 84.0
YHH3_k127_6527808_9 Protein of unknown function (DUF2934) - - - 0.0000007086 54.0
YHH3_k127_6571172_0 PFAM binding-protein-dependent transport systems inner membrane component K02037 - - 2.189e-264 833.0
YHH3_k127_6571172_1 Belongs to the N(4) N(6)-methyltransferase family K07316 - 2.1.1.72 0.0000000000000000000000000000004575 122.0
YHH3_k127_6571172_2 diguanylate cyclase - - - 0.000000000000000000000000000002293 127.0
YHH3_k127_6577587_0 chemotaxis K13487 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009303 343.0
YHH3_k127_6577587_1 Methyltransferase, chemotaxis proteins K00575,K13486 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000006106 237.0
YHH3_k127_6577587_2 PFAM CheW domain protein K13488 - - 0.000000000000000000000000002824 120.0
YHH3_k127_6580302_0 TPR repeat-containing protein - - - 4.8e-228 733.0
YHH3_k127_6580302_1 Sulfotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008877 254.0
YHH3_k127_658084_0 PFAM Citrate transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 403.0
YHH3_k127_658084_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0000000000000000000000000000000000000000000008253 172.0
YHH3_k127_658084_2 Putative prokaryotic signal transducing protein - - - 0.00000000000002195 77.0
YHH3_k127_6596215_0 PFAM MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007257 290.0
YHH3_k127_6596215_1 Tol-Pal system-associated acyl-CoA thioesterase K07107 - - 0.00000000000000000000000000000000000000000000001072 174.0
YHH3_k127_6596215_2 Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000000000000000000000000000001133 170.0
YHH3_k127_6608052_0 COG2274 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain K11004 - - 1.642e-243 766.0
YHH3_k127_6629233_0 dGTPase preferentially hydrolyzes dGTP over the other canonical NTPs K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0015949,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007497 508.0
YHH3_k127_6629233_1 - - - - 0.00000000000001605 76.0
YHH3_k127_6629233_2 AAA domain - - - 0.00000000003246 72.0
YHH3_k127_6663712_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008986,GO:0009058,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016781,GO:0019318,GO:0019319,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046872,GO:0071704,GO:1901576 2.7.9.2 3.603e-250 779.0
YHH3_k127_6677628_0 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 538.0
YHH3_k127_6677628_1 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 - 2.1.1.171 0.00000000000000000000000000000000008864 134.0
YHH3_k127_6677628_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 GO:0000049,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 2.7.7.87 0.00000000000000000002236 92.0
YHH3_k127_6704456_0 TonB-dependent receptor K02014,K16092 - - 0.00000000000000000000002542 114.0
YHH3_k127_6738767_0 DNA segregation ATPase FtsK SpoIIIE K03466 - - 2.452e-250 788.0
YHH3_k127_6738767_1 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000000000000000000000000000000000002953 200.0
YHH3_k127_6742651_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 8.114e-238 738.0
YHH3_k127_6742651_1 signal transduction histidine kinase K07708 - 2.7.13.3 0.000000000000005155 78.0
YHH3_k127_6742651_2 Domain of unknown function (DUF4124) - - - 0.00000000000005212 79.0
YHH3_k127_6756746_0 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009117 290.0
YHH3_k127_6756746_1 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.000000000000000000000000000000000000000000000000000000000000000000003232 240.0
YHH3_k127_6791459_0 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000769 379.0
YHH3_k127_6791459_1 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007625 242.0
YHH3_k127_6801955_0 Belongs to the GPI family K01810 GO:0003674,GO:0003824,GO:0004347,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033554,GO:0034404,GO:0034599,GO:0034641,GO:0034654,GO:0034655,GO:0042221,GO:0042802,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0055086,GO:0070887,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.3.1.9 7.126e-283 876.0
YHH3_k127_6801955_1 DsrE/DsrF-like family - - - 0.000002042 53.0
YHH3_k127_6802308_0 PFAM peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0 1150.0
YHH3_k127_6802308_1 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 485.0
YHH3_k127_6802308_2 PRMT5 oligomerisation domain K11434 - 2.1.1.319 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006302 317.0
YHH3_k127_6802308_3 response regulator receiver K02487,K06596 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 317.0
YHH3_k127_6808141_0 STAS domain K03321 - - 5.81e-233 735.0
YHH3_k127_6808141_1 Chromate transporter K07240 - - 1.007e-215 677.0
YHH3_k127_6808141_10 - - - - 0.00000000000000004523 85.0
YHH3_k127_6808141_11 - - - - 0.00000001514 63.0
YHH3_k127_6808141_2 PFAM Metal-dependent phosphohydrolase, HD K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 497.0
YHH3_k127_6808141_3 PFAM sodium calcium exchanger membrane region K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 492.0
YHH3_k127_6808141_4 response to heat K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006995 496.0
YHH3_k127_6808141_5 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004272 378.0
YHH3_k127_6808141_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 365.0
YHH3_k127_6808141_7 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000002371 241.0
YHH3_k127_6808141_8 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000004268 233.0
YHH3_k127_6808141_9 Domain of unknown function (DUF4336) - - - 0.0000000000000000000000000000000000000000000000000000006239 201.0
YHH3_k127_6862984_0 ABC transporter transmembrane region K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003813 281.0
YHH3_k127_6862984_1 phosphate-selective porin O and P - - - 0.000000000000000000000000000000000000000000000000001813 189.0
YHH3_k127_6862984_2 PFAM formyl transferase domain protein K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000004685 185.0
YHH3_k127_6863747_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002324 396.0
YHH3_k127_6863747_1 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 370.0
YHH3_k127_6863747_2 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 301.0
YHH3_k127_6863747_3 protein conserved in bacteria K07028 - - 0.0000000000000000000000000006686 118.0
YHH3_k127_6888059_0 Adenylate cyclase K05851 GO:0003674,GO:0003824,GO:0004016,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006171,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009187,GO:0009190,GO:0009259,GO:0009260,GO:0009975,GO:0009987,GO:0016829,GO:0016849,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046058,GO:0046390,GO:0046483,GO:0052652,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.1 5.367e-234 755.0
YHH3_k127_6888059_1 PFAM phospholipase Carboxylesterase K06999 - - 0.000000000000000000000000000000000000000000000000000000000000684 214.0
YHH3_k127_6888638_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 3.28e-212 663.0
YHH3_k127_6888638_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003004 547.0
YHH3_k127_6888638_2 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002869 479.0
YHH3_k127_6888638_3 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 302.0
YHH3_k127_6888638_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008638 293.0
YHH3_k127_6888638_5 Protein of unknown function (DUF721) - - - 0.00000007631 61.0
YHH3_k127_6929754_0 Belongs to the glycosyl hydrolase 57 family - - - 1.151e-235 741.0
YHH3_k127_6929754_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 4.156e-214 675.0
YHH3_k127_6929754_2 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.000000000000000000000000000000000000000000001506 169.0
YHH3_k127_6941289_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 3.571e-274 847.0
YHH3_k127_6964162_0 Neisseria PilC beta-propeller domain K02674 - - 5.147e-206 684.0
YHH3_k127_6964162_1 COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 330.0
YHH3_k127_6964162_2 Type II transport protein GspH K08084 - - 0.0000000000000000000009293 102.0
YHH3_k127_6964162_3 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.000000000000000000002934 98.0
YHH3_k127_6964162_4 Type IV Pilus-assembly protein W K02672 - - 0.0000000000000000004706 97.0
YHH3_k127_6964162_5 type IV pilus modification protein PilV K02671 - - 0.0000000000006127 77.0
YHH3_k127_6964162_6 PilX N-terminal - - - 0.00000000001373 71.0
YHH3_k127_6964162_7 Type IV pilus assembly protein PilX C-term K02673 - - 0.00000000008885 70.0
YHH3_k127_6971450_0 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 467.0
YHH3_k127_6971450_1 Sporulation related domain - - - 0.000000000000000000000000000000000000000000000001298 182.0
YHH3_k127_6974420_0 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 - 2.1.1.173,2.1.1.264 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 520.0
YHH3_k127_6974420_1 ABC transporter K06158 - - 0.000000000000000000000000000000000001438 141.0
YHH3_k127_698875_0 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003766 517.0
YHH3_k127_698875_1 COG2755 Lysophospholipase L1 and related esterases K10804 - 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000002233 238.0
YHH3_k127_698875_2 TraB family K09973 - - 0.000000000000000000000000000000000000000000000000000000000000001041 231.0
YHH3_k127_698875_3 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000002183 202.0
YHH3_k127_698875_4 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 - - 0.00000000000000000000000000001965 121.0
YHH3_k127_6992078_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 2.215e-299 936.0
YHH3_k127_6992078_1 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000006494 254.0
YHH3_k127_6992078_2 translation initiation inhibitor, yjgF family - - - 0.000000000000000000000000000000000000000000000002212 176.0
YHH3_k127_6992078_3 PFAM YicC-like - - - 0.000000000000000000000000000000000000000004889 158.0
YHH3_k127_6992078_4 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000004647 103.0
YHH3_k127_7004009_0 Histidine Phosphotransfer domain - - - 0.000000000000000000000000000000000000000000000000000000000001573 215.0
YHH3_k127_7004009_1 FecR protein - - - 0.0000000000000000000000000000000000000000000000009819 187.0
YHH3_k127_7022368_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 380.0
YHH3_k127_7022368_1 COG0642 Signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 351.0
YHH3_k127_7022368_2 Sel1-like repeats. - - - 0.0000000000000000000000005248 114.0
YHH3_k127_7039190_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003565 476.0
YHH3_k127_7039190_1 protein acetylation - - - 0.00000000000000004486 90.0
YHH3_k127_7049979_0 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002506 440.0
YHH3_k127_7049979_1 Domain of unknown function (DUF4040) K05559,K05565 - - 0.00000000000000000000000000000000000000000000000000004041 190.0
YHH3_k127_7049979_2 Membrane - - - 0.00000000000000000000000000000000001168 140.0
YHH3_k127_7057696_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009314,GO:0009380,GO:0009381,GO:0009628,GO:0009987,GO:0016787,GO:0016788,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 2.727e-237 747.0
YHH3_k127_7057696_1 Uracil DNA glycosylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 287.0
YHH3_k127_7057696_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.000000000000000000000000000000000000000000000000000000000000001231 224.0
YHH3_k127_7060997_0 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004026 402.0
YHH3_k127_7060997_1 - - - - 0.0002958 51.0
YHH3_k127_7060997_2 Domain of unknown function (DUF1857) - - - 0.0008282 42.0
YHH3_k127_7100174_0 basal body rod protein K02390 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009971 426.0
YHH3_k127_7100174_1 Belongs to the flagella basal body rod proteins family K02388 - - 0.000000000000000000000000000000000000000000000000000004011 192.0
YHH3_k127_7100174_2 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.000000000000000000000000000000000000000000000000001463 190.0
YHH3_k127_7100174_3 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000006364 130.0
YHH3_k127_7100174_4 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.00000000000000000000000000000004322 129.0
YHH3_k127_7100174_5 TIGRFAM Flagellar basal-body rod K02391 - - 0.0000000000000000000002995 98.0
YHH3_k127_7121181_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005713 570.0
YHH3_k127_7121181_1 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 499.0
YHH3_k127_7121181_10 YfaZ precursor - - - 0.00000000000001974 83.0
YHH3_k127_7121181_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005266 368.0
YHH3_k127_7121181_3 Biotin and Thiamin Synthesis associated domain K01012,K16180 - 2.8.1.6,5.4.99.58 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 314.0
YHH3_k127_7121181_4 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035870,GO:0036220,GO:0036222,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046983,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 286.0
YHH3_k127_7121181_5 TIGRFAM DJ-1 family protein K03152 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000000000009712 234.0
YHH3_k127_7121181_6 Competence protein - - - 0.0000000000000000000000000000000000000000000000000000000501 213.0
YHH3_k127_7121181_7 peptidase - - - 0.0000000000000000000000000000000000000004609 151.0
YHH3_k127_7121181_8 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000004763 146.0
YHH3_k127_7121181_9 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000000000000002719 93.0
YHH3_k127_7126036_0 response regulator receiver K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 396.0
YHH3_k127_7126036_1 - - - - 0.00000000000000000000000000000000000000000000000000000002257 201.0
YHH3_k127_7126036_2 methyltransferase activity - - - 0.000000000000000000000000000001996 126.0
YHH3_k127_7135986_0 Phosphoglucomutase K15778 - 5.4.2.2,5.4.2.8 1.097e-198 628.0
YHH3_k127_7135986_1 Peptidase M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008908 261.0
YHH3_k127_7135986_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002302 271.0
YHH3_k127_7135986_3 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000166,GO:0000287,GO:0001882,GO:0001884,GO:0002134,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019103,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0051259,GO:0051260,GO:0055086,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901136,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000001853 247.0
YHH3_k127_7135986_4 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000005167 208.0
YHH3_k127_7137480_0 response regulator K20977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006757 495.0
YHH3_k127_7137480_1 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006646 463.0
YHH3_k127_7137480_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 362.0
YHH3_k127_7137480_3 cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004301 345.0
YHH3_k127_7137480_4 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 295.0
YHH3_k127_7137480_5 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.000000000000000000000000000000000000000000002749 167.0
YHH3_k127_7137480_6 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K20978 - - 0.00000000000000000000000000008307 117.0
YHH3_k127_7137480_7 Flagellar basal body-associated protein FliL - - - 0.0000000000000000000000000005889 121.0
YHH3_k127_7137480_8 Bacterial export proteins, family 3 K02420 - - 0.000000000000000000000000002974 113.0
YHH3_k127_7137480_9 PFAM flagellar biosynthesis protein, FliO K02418 - - 0.000000000000000001299 92.0
YHH3_k127_7144656_0 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.0000000000000001559 79.0
YHH3_k127_7144656_1 Protein of unknown function (DUF2914) - - - 0.00000000000004756 81.0
YHH3_k127_7166184_0 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 359.0
YHH3_k127_7166184_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000467 319.0
YHH3_k127_7166184_2 helix_turn_helix, cAMP Regulatory protein K10914 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0007154,GO:0007584,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009605,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016070,GO:0017076,GO:0018130,GO:0019001,GO:0019219,GO:0019222,GO:0019438,GO:0030551,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0032553,GO:0032555,GO:0032561,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0035438,GO:0036094,GO:0042221,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045013,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045990,GO:0046483,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0061984,GO:0061985,GO:0065007,GO:0070887,GO:0071496,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140110,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 312.0
YHH3_k127_7166184_3 OsmC-like protein K07397 - - 0.0000000000000000000000000000000000000000000000000000000000001918 214.0
YHH3_k127_7166184_4 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000000000006295 184.0
YHH3_k127_7166184_5 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.000000000000000000000000007485 111.0
YHH3_k127_7166927_0 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006406 479.0
YHH3_k127_7166927_1 Protein of unknown function (DUF1722) - - - 0.00000000000000000000000000000000000000000000000000008672 190.0
YHH3_k127_7166927_2 Protein of unknown function (DUF2878) - - - 0.000000000000000000000000000000000000000631 156.0
YHH3_k127_7194156_0 Polysaccharide chain length determinant protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002998 265.0
YHH3_k127_7194156_1 Protein conserved in bacteria - - - 0.0000000006626 70.0
YHH3_k127_7264109_0 ABC transporter substrate-binding protein PnrA-like K02058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003866 515.0
YHH3_k127_7264109_1 fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 419.0
YHH3_k127_7264109_2 Metallo-beta-lactamase superfamily K13075 - 3.1.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006553 383.0
YHH3_k127_7264109_3 Nucleoside-binding outer membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 294.0
YHH3_k127_7264109_4 PFAM Branched-chain amino acid transport system permease component K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002257 282.0
YHH3_k127_7264109_5 FCD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001705 252.0
YHH3_k127_7264109_6 EamA-like transporter family - - - 0.000000000000000000000000116 110.0
YHH3_k127_7272331_0 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000483 477.0
YHH3_k127_7272331_1 Thioredoxin - - - 0.0000000000000000000000000000000000000000001453 162.0
YHH3_k127_7272331_2 - - - - 0.00000000000000000000003275 102.0
YHH3_k127_7282864_0 Belongs to the HpcH HpaI aldolase family - - - 2.399e-209 662.0
YHH3_k127_7288412_0 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00651 - 2.3.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005787 537.0
YHH3_k127_7288412_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000005132 113.0
YHH3_k127_7301178_0 TIGRFAM Hydrolase, ortholog 1, exosortase system type 1 associated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000601 319.0
YHH3_k127_7301178_1 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004417 317.0
YHH3_k127_7301178_2 PFAM Orn DAP Arg decarboxylase 2 K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000006803 250.0
YHH3_k127_7301178_3 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000003444 230.0
YHH3_k127_7301178_4 TIGRFAM hydrolase, ortholog 2, exosortase system type 1 associated - - - 0.0000000000000000000000000000000000000000007422 164.0
YHH3_k127_7313025_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K21307 - 1.8.5.6 0.0 1680.0
YHH3_k127_7313025_1 heat shock protein binding - - - 0.0 1106.0
YHH3_k127_7313025_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 519.0
YHH3_k127_7313025_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K21308 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 467.0
YHH3_k127_7313025_4 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 439.0
YHH3_k127_7313025_5 DMSO reductase anchor subunit (DmsC) K21309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 430.0
YHH3_k127_7313025_6 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 394.0
YHH3_k127_7313025_7 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 318.0
YHH3_k127_7313025_8 2OG-Fe(II) oxygenase - - - 0.00000000000000000000000000000000000000000000000000000001462 203.0
YHH3_k127_7313025_9 Rieske [2Fe-2S] domain K05710 - - 0.000000000000000004119 87.0
YHH3_k127_7317844_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 3.775e-230 722.0
YHH3_k127_7317844_1 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane - - - 0.000224 48.0
YHH3_k127_7319656_0 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 366.0
YHH3_k127_7319656_1 Role in flagellar biosynthesis K02421 - - 0.000000000000000000000000000000000000000000000000000000000000000003716 234.0
YHH3_k127_7343822_0 type VI secretion protein K11900 - - 8.186e-232 722.0
YHH3_k127_7343822_1 Type VI secretion K11896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 583.0
YHH3_k127_7343822_2 Type VI secretion, TssG K11895 - - 0.00000000000000000000000000000000000000000000000000000000000000000002166 244.0
YHH3_k127_7343822_3 COG0542 ATPases with chaperone activity, ATP-binding subunit K11907 - - 0.0000000000000000000000000000000000000000000000000000000008324 206.0
YHH3_k127_7343822_4 Gene 25-like lysozyme K11905 - - 0.000000000000000000000000002159 116.0
YHH3_k127_7354514_0 Putative diguanylate phosphodiesterase - - - 4.045e-243 766.0
YHH3_k127_7354514_1 COG3221 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.00000000000000000000000000000000000000974 156.0
YHH3_k127_7354514_2 Cytochrome c - - - 0.00000000000000000000000000000000064 149.0
YHH3_k127_7354514_3 Cytochrome c K17230 - - 0.00000000000000000347 99.0
YHH3_k127_7354514_4 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000004146 64.0
YHH3_k127_7354514_5 cytochrome - - - 0.0000001232 64.0
YHH3_k127_7377042_0 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002524 293.0
YHH3_k127_7377042_1 FtsX-like permease family K02004 - - 0.0000000003991 60.0
YHH3_k127_7394004_0 nitrogen regulation protein K07712 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 1.393e-226 709.0
YHH3_k127_7394004_1 signal transduction histidine kinase K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000528 349.0
YHH3_k127_7394004_2 ATPase activity, coupled to transmembrane movement of substances - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006689 289.0
YHH3_k127_7394004_3 Prokaryotic N-terminal methylation motif - - - 0.000000000000000000000000000000008065 136.0
YHH3_k127_7398691_0 Transcriptional regulatory protein, C terminal K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007859 309.0
YHH3_k127_7398691_1 His Kinase A (phospho-acceptor) domain K02484,K07645 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 306.0
YHH3_k127_7398691_2 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000006305 241.0
YHH3_k127_7398691_3 His Kinase A (phosphoacceptor) domain K07645 - 2.7.13.3 0.0000000000000000000000000000000000000000004262 164.0
YHH3_k127_7421483_0 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 325.0
YHH3_k127_7421483_1 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 291.0
YHH3_k127_7421483_2 Universal stress protein family - - - 0.0000000000000000000000000000000001227 137.0
YHH3_k127_7421483_3 Belongs to the CinA family K03743 - 3.5.1.42 0.0000000000001519 71.0
YHH3_k127_7447414_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 425.0
YHH3_k127_7447414_1 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001118 276.0
YHH3_k127_7447414_2 - - - - 0.00000000000000003875 89.0
YHH3_k127_7447414_3 Tetratricopeptide repeat - - - 0.0000000000006379 78.0
YHH3_k127_746556_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0030337,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0042802,GO:0043170,GO:0043846,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050790,GO:0061695,GO:0065007,GO:0065009,GO:0071704,GO:0090304,GO:0098772,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000673 549.0
YHH3_k127_746556_1 MotA/TolQ/ExbB proton channel family K02556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007452 351.0
YHH3_k127_746556_10 PFAM Amino acid-binding ACT K03567 - - 0.00000000000000000000000000000000000000000000000000001694 194.0
YHH3_k127_746556_11 Histidine kinase - - - 0.000000000000000000000000000000000000000000002223 182.0
YHH3_k127_746556_12 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000007434 154.0
YHH3_k127_746556_13 Transcriptional regulator K13643 - - 0.00000000000000000000000000000000001996 141.0
YHH3_k127_746556_14 Tetratricopeptide repeat - - - 0.000000000000000000000000001065 129.0
YHH3_k127_746556_15 Sel1-like repeats. K07126 - - 0.000000000000000000001295 108.0
YHH3_k127_746556_16 - - - - 0.00000000000000000002547 98.0
YHH3_k127_746556_17 protein conserved in bacteria K09920 - - 0.0000000000003093 75.0
YHH3_k127_746556_18 response K18444 - - 0.0000000001437 66.0
YHH3_k127_746556_2 Flagellar motor protein K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 302.0
YHH3_k127_746556_22 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.0002103 45.0
YHH3_k127_746556_3 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002273 278.0
YHH3_k127_746556_4 ZIP Zinc transporter K16267 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005223 280.0
YHH3_k127_746556_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001526 279.0
YHH3_k127_746556_6 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000009946 248.0
YHH3_k127_746556_7 P-aminobenzoate N-oxygenase AurF - - - 0.0000000000000000000000000000000000000000000000000000000000000000001973 240.0
YHH3_k127_746556_8 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000003297 231.0
YHH3_k127_746556_9 Protein of unknown function (DUF3047) - - - 0.0000000000000000000000000000000000000000000000000000000002183 211.0
YHH3_k127_7512039_0 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 369.0
YHH3_k127_7512039_1 PFAM MoeZ MoeB domain K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003696 295.0
YHH3_k127_7512039_2 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.0000000000000000000000000000000000000000000000000000000000003288 242.0
YHH3_k127_7512039_3 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000004719 167.0
YHH3_k127_7512039_4 Cache domain - - - 0.0000000000000000000000000000000001404 150.0
YHH3_k127_7512039_5 PBP superfamily domain K02040 - - 0.00000000000000000001052 103.0
YHH3_k127_7521028_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 579.0
YHH3_k127_7521028_1 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 0.0000000000000000000001176 98.0
YHH3_k127_7533121_0 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008149 475.0
YHH3_k127_7533121_1 iron ion homeostasis K02012 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000002222 233.0
YHH3_k127_7533121_2 Mercury scavenger that specifically binds to one mercury ion and which passes it to the mercuric reductase (MerA) via the MerT protein K08364 - - 0.000001933 52.0
YHH3_k127_7533121_3 Sel1-like repeats. - - - 0.000007015 52.0
YHH3_k127_7543987_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 9.979e-194 613.0
YHH3_k127_7543987_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 434.0
YHH3_k127_7543987_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003257 347.0
YHH3_k127_7543987_3 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.000000000000000000000000000000000000000000000000000001003 195.0
YHH3_k127_7554185_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1214.0
YHH3_k127_7554185_1 Cytokinin riboside 5'-monophosphate phosphoribohydrolase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 381.0
YHH3_k127_7554185_2 PFAM Endonuclease Exonuclease phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 306.0
YHH3_k127_7554185_3 Thiol disulfide interchange protein K03673 - - 0.00000000000000000000000000000000000000000000000000000000001759 216.0
YHH3_k127_7554185_4 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000003349 195.0
YHH3_k127_7554185_5 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000008644 196.0
YHH3_k127_7554185_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000001572 109.0
YHH3_k127_7554185_7 Protein of unknown function (DUF2782) - - - 0.00000000000001438 79.0
YHH3_k127_7585548_0 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004779 289.0
YHH3_k127_7605316_0 of ABC transporters with duplicated ATPase - - - 3.765e-273 851.0
YHH3_k127_7605316_1 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000005567 228.0
YHH3_k127_7605316_2 Smr protein MutS2 - - - 0.00000000000000000000000000000003436 132.0
YHH3_k127_7628503_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 438.0
YHH3_k127_7628503_1 AMP-binding enzyme C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006907 342.0
YHH3_k127_7628503_2 Polysaccharide deacetylase - - - 0.000000000002172 72.0
YHH3_k127_7643377_0 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000001797 250.0
YHH3_k127_7643377_1 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000003853 190.0
YHH3_k127_7643377_2 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000000003089 141.0
YHH3_k127_7643377_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000001101 63.0
YHH3_k127_7661766_0 Sodium Bile acid symporter family K03453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000413 300.0
YHH3_k127_7661766_1 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000002049 152.0
YHH3_k127_7661766_2 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.00000000000000000001687 94.0
YHH3_k127_7661766_3 EamA-like transporter family - - - 0.0000000000000000002808 92.0
YHH3_k127_7668067_0 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000109 249.0
YHH3_k127_7668067_1 - - - - 0.00000000000000000000000000000000000000000000000000001162 195.0
YHH3_k127_7668067_2 Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine K00772,K19696 - 2.4.2.28,2.4.2.44 0.000000000000000000003839 93.0
YHH3_k127_7668067_3 Peptidoglycan-binding protein, CsiV - - - 0.0000000000003941 80.0
YHH3_k127_7668067_4 - - - - 0.00000003286 61.0
YHH3_k127_7668524_0 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 444.0
YHH3_k127_7668524_1 Dehydrogenase E1 component K00164 - 1.2.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 425.0
YHH3_k127_7668524_2 PFAM peptidase M3A and M3B, thimet oligopeptidase F K01414 - 3.4.24.70 0.000000000000000000000000000000000000000000000000000000000000000000000000001741 257.0
YHH3_k127_7670397_0 beta-galactosidase activity K01192 - 3.2.1.25 2.365e-250 797.0
YHH3_k127_7670397_1 acyl-CoA dehydrogenase activity K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 500.0
YHH3_k127_7670397_2 Domain of unknown function (DUF1839) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 446.0
YHH3_k127_7670397_3 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000009188 235.0
YHH3_k127_7670397_4 thiolester hydrolase activity - - - 0.00000000000000000000000000000000000001107 153.0
YHH3_k127_7670397_5 Acyltransferase family - - - 0.00000000000000000000000000000000632 141.0
YHH3_k127_7670397_6 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000006871 99.0
YHH3_k127_7753531_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 501.0
YHH3_k127_7753531_1 Bacterial type II and III secretion system protein K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 288.0
YHH3_k127_7753531_2 PFAM Ig domain protein group 2 domain protein - - - 0.0000000000000000000000000000000000000000000001265 181.0
YHH3_k127_7753531_3 General secretion pathway protein C K02452 - - 0.00000000000000000000000000000000000000005915 163.0
YHH3_k127_775658_0 Mitochondrial fission ELM1 K07276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 303.0
YHH3_k127_775658_1 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000001651 227.0
YHH3_k127_775658_2 protein conserved in bacteria - - - 0.00000000000000000000001331 103.0
YHH3_k127_7759628_0 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 462.0
YHH3_k127_7759628_1 Methylates ribosomal protein L11 K02687 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006480,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018011,GO:0018012,GO:0018022,GO:0018023,GO:0018193,GO:0018194,GO:0018205,GO:0019538,GO:0031365,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 340.0
YHH3_k127_7759628_2 TIGRFAM MJ0042 family finger-like protein - - - 0.00000000004691 66.0
YHH3_k127_7767048_0 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.000000000000000000000000000000000000000000000000000000000000006822 224.0
YHH3_k127_7767048_1 - - - - 0.000000000000000000000000000000000000000000000000000000001141 205.0
YHH3_k127_7767048_2 HDOD domain - - - 0.0000000000000006217 85.0
YHH3_k127_7780396_0 TPR repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 596.0
YHH3_k127_7780396_1 repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 342.0
YHH3_k127_7792770_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002847 539.0
YHH3_k127_7792770_1 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 340.0
YHH3_k127_7792770_2 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000005576 207.0
YHH3_k127_7792770_3 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.00000000000000000000000007542 116.0
YHH3_k127_7821211_0 COG0642 Signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 351.0
YHH3_k127_7821211_1 Glycosyl transferase family 1 - - - 0.0000000000000000000000000000000000000000000000000000003257 200.0
YHH3_k127_7836052_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 407.0
YHH3_k127_7836052_1 phosphoserine phosphatase K01079 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 298.0
YHH3_k127_7836052_2 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.000000000000000000000000000002998 121.0
YHH3_k127_7840721_0 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002782 267.0
YHH3_k127_7840721_1 PFAM LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000263 267.0
YHH3_k127_7840721_2 Diguanylate cyclase K02488 - 2.7.7.65 0.00000000000000000000000000000000000002306 151.0
YHH3_k127_7850959_0 Signal transduction histidine kinase K15011 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007004 340.0
YHH3_k127_7850959_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000009058 230.0
YHH3_k127_7850959_2 - - - - 0.0000000000000000000000000000000000000000000001384 177.0
YHH3_k127_7850959_3 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000001499 171.0
YHH3_k127_7850959_4 Domain of unkown function (DUF1775) K09796 - - 0.000000000000000000000000000000000000000005114 167.0
YHH3_k127_7876121_0 Prokaryotic cytochrome b561 - - - 0.000000000000000000000000000000000000000000000000000000000000000007095 231.0
YHH3_k127_7876121_1 Dihaem cytochrome c - - - 0.00000000000000000000000000000000000000005546 159.0
YHH3_k127_7876121_2 Domain of unknown function (DUF1924) - - - 0.00000000000000000000000000000000003353 139.0
YHH3_k127_7876121_3 PFAM Formylglycine-generating sulfatase enzyme K06196,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000005895 87.0
YHH3_k127_7885360_0 PFAM malic K00029 - 1.1.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 570.0
YHH3_k127_7885360_1 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009571 425.0
YHH3_k127_7885360_2 nuclease K01174 - 3.1.31.1 0.000000000000000000000000000000000000000000000005418 184.0
YHH3_k127_7885360_3 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000002266 117.0
YHH3_k127_7891044_0 PFAM histone deacetylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 399.0
YHH3_k127_7891044_1 Part of a sulfur-relay system K11179 - - 0.0000000000000000000000000000000007989 133.0
YHH3_k127_7929324_0 Molybdopterin oxidoreductase Fe4S4 domain K00372 - - 2.253e-258 807.0
YHH3_k127_7999640_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 551.0
YHH3_k127_7999640_1 Na+/Pi-cotransporter K03324 GO:0003674,GO:0005215,GO:0005315,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0015291,GO:0015318,GO:0015698,GO:0016020,GO:0022804,GO:0022857,GO:0034220,GO:0035435,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 320.0
YHH3_k127_7999640_2 Involved in chromosome partitioning - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 313.0
YHH3_k127_7999640_3 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000009018 255.0
YHH3_k127_7999830_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005985 568.0
YHH3_k127_7999830_1 Displays ATPase and GTPase activities K06958 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 311.0
YHH3_k127_7999830_2 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007609 300.0
YHH3_k127_7999830_3 PFAM ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000007918 184.0
YHH3_k127_7999830_4 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.00000000000000000000000000000000000000008049 156.0
YHH3_k127_7999830_5 PTS system fructose IIA component K02793,K02794 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006793,GO:0006796,GO:0006810,GO:0008150,GO:0008152,GO:0008643,GO:0008645,GO:0008982,GO:0009401,GO:0009987,GO:0015144,GO:0015145,GO:0015149,GO:0015578,GO:0015749,GO:0015761,GO:0016020,GO:0016021,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0022870,GO:0031224,GO:0031226,GO:0034219,GO:0044237,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046323,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098657,GO:0098704,GO:0098708,GO:0098739,GO:1904659 2.7.1.191 0.000000000000000000000000000000000000003381 150.0
YHH3_k127_7999830_6 Sigma 54 modulation protein K05808 - - 0.000000000000000000000000000000000786 132.0
YHH3_k127_7999830_7 Phosphotransferase System K11189 - - 0.000006587 48.0
YHH3_k127_8044210_0 membrane organization K03641 - - 1.422e-204 669.0
YHH3_k127_8044210_1 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009453 445.0
YHH3_k127_8044210_2 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.000000000000000007963 83.0
YHH3_k127_8093503_0 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000001433 237.0
YHH3_k127_8095668_0 HlyD family secretion protein K02005 - - 0.000000000000000000000000000202 119.0
YHH3_k127_8095668_1 - - - - 0.00000000000007988 80.0
YHH3_k127_8095668_2 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.00000001832 56.0
YHH3_k127_8156463_0 PFAM Aminotransferase class-III K00819 - 2.6.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 553.0
YHH3_k127_8156463_1 Cytochrome c bacterial - - - 0.00000000000000000000000000000000000000003163 168.0
YHH3_k127_8156463_2 Arginase family K01476 - 3.5.3.1 0.000000000000000000000000000000000000206 144.0
YHH3_k127_8156463_3 threonine efflux protein - - - 0.0005876 47.0
YHH3_k127_8184951_0 Sensor histidine kinase, PAS, PAS, PAS and PAS domain-containing - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007242 432.0
YHH3_k127_8184951_1 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002162 381.0
YHH3_k127_8184951_2 YD repeat - - - 0.0008306 51.0
YHH3_k127_8216668_0 Polysaccharide biosynthesis protein K01709 - 4.2.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002148 527.0
YHH3_k127_8216668_1 Nucleotidyl transferase K00978 - 2.7.7.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007385 452.0
YHH3_k127_8216668_2 O-linked N-acetylglucosamine transferase, SPINDLY family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 464.0
YHH3_k127_8216668_3 C-methyltransferase C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004431 316.0
YHH3_k127_8216668_4 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000503 299.0
YHH3_k127_8253183_0 RNA binding K06959 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 373.0
YHH3_k127_8253183_1 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000004973 173.0
YHH3_k127_8253183_2 - - - - 0.0000000000000000000000000000000000000008408 158.0
YHH3_k127_8253183_3 Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000002031 131.0
YHH3_k127_8274600_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1302.0
YHH3_k127_8274600_1 Transcriptional regulatory protein, C terminal K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 312.0
YHH3_k127_8274600_2 His Kinase A (phospho-acceptor) domain K02484,K07645 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000004922 209.0
YHH3_k127_8304709_0 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 509.0
YHH3_k127_8304709_1 GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003346 537.0
YHH3_k127_8304709_2 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006565 331.0
YHH3_k127_8304709_3 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 302.0
YHH3_k127_8304709_4 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002948 276.0
YHH3_k127_8304709_5 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000000004678 221.0
YHH3_k127_8304709_6 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000003207 164.0
YHH3_k127_83319_0 - - - - 0.000000000000000000000617 108.0
YHH3_k127_83319_1 Prolyl 4-hydroxylase alpha subunit homologues. - - - 0.0000000001281 72.0
YHH3_k127_8353797_0 COG3210 Large exoproteins involved in heme utilization or adhesion - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 431.0
YHH3_k127_8384936_0 - - - - 1.368e-269 848.0
YHH3_k127_8384936_1 PFAM Metal-dependent phosphohydrolase, HD K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 432.0
YHH3_k127_8384936_2 TIGRFAM Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006709 416.0
YHH3_k127_8384936_3 COG0784 FOG CheY-like receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 387.0
YHH3_k127_843089_0 iron assimilation K07223 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004476 375.0
YHH3_k127_843089_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007463 279.0
YHH3_k127_843089_2 glyoxalase III activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001323 265.0
YHH3_k127_843089_3 Haem-degrading - - - 0.000000000000000000000000000000000000000000000000000000000000000000003681 240.0
YHH3_k127_843089_4 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000000000000000001282 220.0
YHH3_k127_843089_5 - - - - 0.0000000000000000000000000000000000000000000000000000001576 197.0
YHH3_k127_843089_6 Prolyl 4-hydroxylase alpha subunit homologues. K07394 - - 0.00000000000000000000000000000000000000000000000000001859 198.0
YHH3_k127_843089_7 metal-binding protein - GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010212,GO:0042802,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0050896 - 0.00000000000000000000000000000000000009507 143.0
YHH3_k127_843089_8 Pentapeptide repeats (8 copies) - - - 0.0000000000000000000000000000000000007308 142.0
YHH3_k127_843089_9 - - - - 0.00000000000000000000000000000000002796 138.0
YHH3_k127_8465121_0 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 526.0
YHH3_k127_8465121_1 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000002089 204.0
YHH3_k127_8465121_2 - - - - 0.0000000000004785 76.0
YHH3_k127_846607_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 0.0 1187.0
YHH3_k127_846607_1 4-Hydroxyphenylpyruvate dioxygenase - - - 5.799e-219 685.0
YHH3_k127_846607_2 A predicted alpha-helical domain with a conserved ER motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 316.0
YHH3_k127_846607_3 Circularly permuted ATP-grasp type 2 - - - 0.0000000000000000000004487 95.0
YHH3_k127_8482796_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 595.0
YHH3_k127_851897_0 AMP-binding enzyme C-terminal domain K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 559.0
YHH3_k127_851897_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 441.0
YHH3_k127_8545063_0 zinc protease protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 339.0
YHH3_k127_8545063_1 NAD-dependent epimerase dehydratase K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004829 324.0
YHH3_k127_8545063_2 PFAM Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001609 286.0
YHH3_k127_8545063_3 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000001941 244.0
YHH3_k127_8545740_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 GO:0000287,GO:0003674,GO:0003824,GO:0004799,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006231,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009157,GO:0009162,GO:0009165,GO:0009176,GO:0009177,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009314,GO:0009394,GO:0009628,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0032259,GO:0034641,GO:0034654,GO:0042083,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046073,GO:0046385,GO:0046483,GO:0046872,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000813 465.0
YHH3_k127_8545740_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007994 404.0
YHH3_k127_8545740_2 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000001383 156.0
YHH3_k127_8609104_0 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 381.0
YHH3_k127_8609104_1 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 333.0
YHH3_k127_8609104_2 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.00000000000000000000000000000000000000000000000000000000000424 213.0
YHH3_k127_8609104_3 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 0.00000000000000000000000000001349 119.0
YHH3_k127_8637120_0 Sel1-like repeats. K07126 - - 0.000000000000000000000000001058 125.0
YHH3_k127_8637120_1 domain, Protein - - - 0.000000000000001488 88.0
YHH3_k127_8637120_2 Protein required for attachment to host cells - - - 0.000000000001633 70.0
YHH3_k127_8637120_3 PFAM heat shock protein DnaJ - - - 0.0002055 53.0
YHH3_k127_8641552_0 COG4992 Ornithine acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 541.0
YHH3_k127_8641552_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065,K13252 - 2.1.3.3,2.1.3.6,2.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 461.0
YHH3_k127_8641552_2 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009203 424.0
YHH3_k127_8641552_3 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007293 402.0
YHH3_k127_8641552_4 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007489 336.0
YHH3_k127_8641552_5 Domain of Unknown Function (DUF349) - - - 0.0000000000000000000000000000000000000000000000000000000005084 227.0
YHH3_k127_8641552_6 COG2863 Cytochrome c553 - - - 0.000000000000000000000000000000000000000003702 162.0
YHH3_k127_8641552_7 SH3 domain K07184 - - 0.0000000000000000000000000000000000000474 151.0
YHH3_k127_8641955_0 PFAM AMP-dependent synthetase and ligase - - - 3.267e-212 671.0
YHH3_k127_8641955_1 PFAM Orn DAP Arg decarboxylase 2 K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 398.0
YHH3_k127_8646180_0 PFAM Peptidoglycan-binding lysin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001119 274.0
YHH3_k127_8646180_1 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000004048 250.0
YHH3_k127_8646180_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006418,GO:0006431,GO:0006464,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019752,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000004122 87.0
YHH3_k127_866183_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016987,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043254,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 1.264e-255 801.0
YHH3_k127_866183_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 586.0
YHH3_k127_866183_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007169 486.0
YHH3_k127_866183_3 Inositol monophosphatase family K01082 - 3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 308.0
YHH3_k127_866183_4 PFAM NUDIX hydrolase K08312 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009019 247.0
YHH3_k127_866183_5 Glutamyl-tRNA amidotransferase K09117 - - 0.000000000000000000000000000000000000000000000008695 176.0
YHH3_k127_866183_6 Belongs to the bacterial histone-like protein family - - - 0.000000000000000000000000000002064 123.0
YHH3_k127_866183_7 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000004276 110.0
YHH3_k127_866183_8 DNA alkylation repair - - - 0.0000003262 52.0
YHH3_k127_8702239_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 7.017e-226 714.0
YHH3_k127_8702239_1 aldehyde-lyase activity K01621 - 4.1.2.22,4.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008891 374.0
YHH3_k127_8702239_2 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004542 332.0
YHH3_k127_8736722_0 Ammonium transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000005633 210.0
YHH3_k127_8736722_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000001699 146.0
YHH3_k127_8736722_2 Iron-binding zinc finger CDGSH type - - - 0.00000000000000000000000000000002356 127.0
YHH3_k127_8736722_3 Domain of unknown function (DUF4124) - - - 0.0000000005768 67.0
YHH3_k127_8758535_0 MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 583.0
YHH3_k127_8758535_1 Biopolymer transport protein ExbD TolR K03559 - - 0.00000000000000000000000000000000000000000000000000000004276 201.0
YHH3_k127_8758535_2 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000002619 125.0
YHH3_k127_8758535_3 TonB C terminal - - - 0.0000000001567 65.0
YHH3_k127_876892_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 5.193e-255 793.0
YHH3_k127_876892_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004491 262.0
YHH3_k127_8769211_0 Cytochrome b(N-terminal)/b6/petB K00412 - - 6.443e-206 646.0
YHH3_k127_8769211_1 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal K00411 - 1.10.2.2 0.0000000000000000000000000000000000000000000000000000000000000000001063 234.0
YHH3_k127_8769211_2 Cytochrome C1 family K00413 - - 0.0000000000000000000000000000000000000000000000000463 186.0
YHH3_k127_8787724_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 3.724e-306 954.0
YHH3_k127_8787724_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046033,GO:0046040,GO:0046085,GO:0046086,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 492.0
YHH3_k127_8813589_0 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002346 284.0
YHH3_k127_8813589_1 riboflavin synthase, alpha K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000001378 255.0
YHH3_k127_8813589_2 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000201 179.0
YHH3_k127_8822817_0 ImcF-related N-terminal domain K11891 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005319 555.0
YHH3_k127_8822817_1 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE K11893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 342.0
YHH3_k127_8822817_2 Type VI secretion system protein DotU K11892 - - 0.0000000000000000000000000000000000000000006518 165.0
YHH3_k127_8822817_3 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ K11910 - - 0.00000000000000000000000000005628 122.0
YHH3_k127_8822817_4 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 - - - 0.00000000000000000004446 97.0
YHH3_k127_885008_0 HMGL-like K02594 - 2.3.3.14 1.863e-204 640.0
YHH3_k127_885008_1 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 445.0
YHH3_k127_885008_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000001513 171.0
YHH3_k127_885008_3 Beta-eliminating lyase K04487 - 2.8.1.7 0.000000000001482 66.0
YHH3_k127_8885057_0 Molydopterin dinucleotide binding domain K00123,K05299 - 1.17.1.10,1.17.1.9 3.399e-282 880.0
YHH3_k127_8924284_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 1.818e-250 781.0
YHH3_k127_8948864_0 part of a sulfur-relay system K11179 - - 0.0000000000000000000000000000000003493 138.0
YHH3_k127_8948864_1 - - - - 0.00000000004596 72.0
YHH3_k127_896340_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 1.802e-209 668.0
YHH3_k127_896340_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000003503 102.0
YHH3_k127_896340_2 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.00000000000000000341 88.0
YHH3_k127_896340_3 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000005188 61.0
YHH3_k127_9011558_0 Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000837 250.0
YHH3_k127_9011558_1 Protein of unknown function (DUF1614) - - - 0.00000000000000000000000000000000000000000000000000000000000000001649 235.0
YHH3_k127_9011558_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000004262 205.0
YHH3_k127_9013585_0 Alkaline and neutral invertase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 377.0
YHH3_k127_9013585_1 TIGRFAM Diguanylate cyclase - - - 0.000000000000000000000000000000000000005185 159.0
YHH3_k127_9013585_2 Protein of unknown function (DUF1622) - - - 0.00000000000000000000001317 104.0
YHH3_k127_9020926_0 Protein of unknown function (DUF3365) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001368 273.0
YHH3_k127_9020926_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008789 243.0
YHH3_k127_9020926_2 NMT1-like family K22067 - - 0.000000000000000000000000000000000000000000000000000000000001525 214.0
YHH3_k127_9020926_3 Globin - - - 0.000000000000000000000000000000000000000000000000000003707 194.0
YHH3_k127_9058191_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009314,GO:0009380,GO:0009628,GO:0032991,GO:0042802,GO:0044424,GO:0044464,GO:0050896,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 5e-324 1004.0
YHH3_k127_9058191_1 Aminotransferase K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000019 205.0
YHH3_k127_9059023_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0018130,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0055114,GO:0055129,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005165 610.0
YHH3_k127_9059023_1 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000000000000000000000000000000000000000000000000000001208 225.0
YHH3_k127_9059023_2 Processivity clamp loader gamma complex DNA pol III C-term K02340 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.000000000000000000000000000001239 124.0
YHH3_k127_9059023_3 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006417,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043023,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:0090069,GO:0090071,GO:2000112,GO:2000113 - 0.000000000000000000000000000004873 126.0
YHH3_k127_9073980_0 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843,K19810 - 5.4.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007382 412.0
YHH3_k127_9073980_1 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006417,GO:0006448,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0072344,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112,GO:2000113,GO:2001124,GO:2001125 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006353 301.0
YHH3_k127_9073980_2 COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II) K04568 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006430,GO:0006464,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016746,GO:0016755,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052868,GO:0071704,GO:0071915,GO:0072580,GO:0072581,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003627 292.0
YHH3_k127_9073980_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001935 271.0
YHH3_k127_9114943_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 489.0
YHH3_k127_9114943_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008506 387.0
YHH3_k127_9114943_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 297.0
YHH3_k127_9114943_3 - - - - 0.000000000000000000000000000000000000000388 157.0
YHH3_k127_9114943_4 signal peptide protein - - - 0.0003617 44.0
YHH3_k127_9118832_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 332.0
YHH3_k127_9118832_1 Thiamine monophosphate synthase K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 327.0
YHH3_k127_9118832_2 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009273 253.0
YHH3_k127_9118832_3 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000000000647 203.0
YHH3_k127_9118832_4 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000004874 161.0
YHH3_k127_9118832_5 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 GO:0003674,GO:0004857,GO:0005488,GO:0008150,GO:0008270,GO:0008657,GO:0010911,GO:0030234,GO:0032780,GO:0042030,GO:0043086,GO:0043167,GO:0043169,GO:0043462,GO:0044092,GO:0046872,GO:0046914,GO:0050790,GO:0051336,GO:0051346,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0072586,GO:0098772,GO:2000371,GO:2000372 - 0.00000000000000002564 83.0
YHH3_k127_9142928_0 PFAM Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009235 453.0
YHH3_k127_9142928_1 Type II secretory pathway, component ExeA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000233 300.0
YHH3_k127_9155839_0 response regulator receiver K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000325 618.0
YHH3_k127_9155839_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005342 580.0
YHH3_k127_9155839_2 Tetratricopeptide repeat - - - 0.00000000005832 71.0
YHH3_k127_9155839_3 Sugar transferase - - - 0.0000000003204 60.0
YHH3_k127_9190659_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 551.0
YHH3_k127_9190659_1 FeS assembly ATPase SufC K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005633 378.0
YHH3_k127_9190659_2 Uncharacterized protein family (UPF0051) K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004625 372.0
YHH3_k127_9190659_3 NifU-like N terminal domain K04488 - - 0.0000000000000000000000000000000000000000000000000008618 187.0
YHH3_k127_9190659_4 Iron-sulfur cluster assembly protein - - - 0.00000000000000000002463 92.0
YHH3_k127_9204726_0 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009052 498.0
YHH3_k127_9204726_1 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004962 275.0
YHH3_k127_9204726_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000001226 131.0
YHH3_k127_9210922_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 476.0
YHH3_k127_9210922_1 Oxidoreductase FAD-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 366.0
YHH3_k127_9210922_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002217 256.0
YHH3_k127_9210922_3 Bacterial-like globin K06886 - - 0.000000000000000000000000000000000000000000000000000000003579 200.0
YHH3_k127_9229954_0 Cell wall hydrolase autolysin K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 371.0
YHH3_k127_9229954_1 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 GO:0000166,GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043531,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000003018 186.0
YHH3_k127_9229954_2 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.0000000000000000000000000000000000000001318 154.0
YHH3_k127_9229954_3 Von Willebrand factor type A K02448 - - 0.0003525 44.0
YHH3_k127_9233688_0 Surface antigen variable number K07278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007435 324.0
YHH3_k127_9233688_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003486 262.0
YHH3_k127_9233688_2 surface antigen K07278 - - 0.000000000001713 74.0
YHH3_k127_9248389_0 PFAM tRNA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 535.0
YHH3_k127_9248389_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 383.0
YHH3_k127_9248389_2 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007344 319.0
YHH3_k127_9248389_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001029 250.0
YHH3_k127_9248389_4 - - - - 0.000000000000000000000000000000000000000000000006669 177.0
YHH3_k127_9248389_5 sulfur carrier activity K04085 - - 0.0000000000000000000000000005815 116.0
YHH3_k127_9248389_6 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 0.00000000000000000000000003741 108.0
YHH3_k127_9288423_0 Cysteine-rich domain - - - 2.81e-233 728.0
YHH3_k127_9288423_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006672 555.0
YHH3_k127_9288423_2 PFAM Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009412 264.0
YHH3_k127_9288423_3 Protein of unknown function (DUF3501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001276 268.0
YHH3_k127_9319779_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000408 364.0
YHH3_k127_9319779_1 - - - - 0.000000000000000000000000000000000000000000000000000000034 200.0
YHH3_k127_9319779_2 PFAM ATPase associated with various cellular activities K04748 - - 0.0000000000004592 72.0
YHH3_k127_9323014_0 TIGRFAM Oxaloacetate decarboxylase, alpha subunit K01960 - 6.4.1.1 1.08e-288 898.0
YHH3_k127_9323014_1 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01959 - 6.4.1.1 3.589e-206 646.0
YHH3_k127_9323014_2 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001147 252.0
YHH3_k127_9323014_3 PFAM peptidase S49 K04773 - - 0.00000000000000000000000000000002674 128.0
YHH3_k127_9323168_0 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 1.756e-276 864.0
YHH3_k127_9323168_1 Alpha-amylase domain K01187 - 3.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004595 307.0
YHH3_k127_9323168_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000001337 181.0
YHH3_k127_9323168_3 Thioredoxin-like domain - - - 0.000000000000000000000000000006986 125.0
YHH3_k127_9355935_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 3.061e-196 622.0
YHH3_k127_9355935_1 (ABC) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 451.0
YHH3_k127_9355935_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008111 389.0
YHH3_k127_9355935_3 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003428 347.0
YHH3_k127_9355935_4 Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second- messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a - - - 0.000000000000000000000000000002297 124.0
YHH3_k127_9368651_0 Fatty acid hydroxylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 440.0
YHH3_k127_9368651_1 SNARE associated Golgi protein - - - 0.00000000000000000000000197 106.0
YHH3_k127_9381827_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 3.713e-291 898.0
YHH3_k127_9381827_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692 463.0
YHH3_k127_9381827_2 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 387.0
YHH3_k127_9381827_3 HAD-hyrolase-like K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 308.0
YHH3_k127_9411079_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 447.0
YHH3_k127_9411079_1 O-Antigen ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 423.0
YHH3_k127_943609_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 520.0
YHH3_k127_943609_1 Glycine cleavage system P-protein K00282 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007728 281.0
YHH3_k127_9441184_0 Methyl-accepting chemotaxis protein (MCP) signaling domain - - - 0.00000000000000000000000000000000000000000000003764 183.0
YHH3_k127_9498078_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1426.0
YHH3_k127_9522804_0 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005706 546.0
YHH3_k127_9522804_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018065,GO:0018130,GO:0018160,GO:0018193,GO:0018198,GO:0019438,GO:0019538,GO:0033013,GO:0033014,GO:0034641,GO:0036211,GO:0042168,GO:0042440,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 438.0
YHH3_k127_9522804_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009330,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140097,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000001683 263.0
YHH3_k127_9522804_3 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.0000000000000006406 80.0
YHH3_k127_9523363_0 Molybdenum ABC transporter periplasmic molybdate-binding protein K02020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 322.0
YHH3_k127_9523363_1 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003393 304.0
YHH3_k127_9523363_2 COG4149 ABC-type molybdate transport system, permease component K02018 - - 0.00000000000000000000000000000000000000000000000000000000000001181 218.0
YHH3_k127_9523363_3 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 GO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004532,GO:0004536,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008297,GO:0008310,GO:0008408,GO:0008946,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0016896,GO:0019439,GO:0034611,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140097,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000000009166 86.0
YHH3_k127_9550855_0 PFAM FAD linked oxidase domain protein K03777 - 1.1.5.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000551 552.0
YHH3_k127_9550855_1 Argininosuccinate lyase C-terminal K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 434.0
YHH3_k127_9550855_10 diguanylate cyclase - - - 0.000000000000000001942 95.0
YHH3_k127_9550855_11 Protein of unknown function (DUF2835) - - - 0.000000000000002707 79.0
YHH3_k127_9550855_12 PFAM Pentapeptide repeats (8 copies) - - - 0.00000001822 63.0
YHH3_k127_9550855_2 Pseudouridine synthase K06177 - 5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007613 358.0
YHH3_k127_9550855_3 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 338.0
YHH3_k127_9550855_4 Ami_2 K03806 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000003271 246.0
YHH3_k127_9550855_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000005679 221.0
YHH3_k127_9550855_6 Protein of Unknown function (DUF2784) - - - 0.000000000000000000000000000000000000000000005651 166.0
YHH3_k127_9550855_7 Uncharacterized protein family UPF0016 - - - 0.000000000000000000000000000000000000001441 148.0
YHH3_k127_9550855_8 nucleotidyltransferase activity K01154,K07076,K18842 - 3.1.21.3 0.00000000000000000000000000000005569 128.0
YHH3_k127_9550855_9 HEPN domain - - - 0.00000000000000000003235 95.0
YHH3_k127_959459_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033554,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:1901576 2.4.1.18 1.889e-299 926.0
YHH3_k127_959459_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005372 520.0
YHH3_k127_959459_2 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000005027 184.0
YHH3_k127_960003_0 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 496.0
YHH3_k127_960003_2 Pyridine nucleotide-disulphide oxidoreductase K05297,K12265 - 1.18.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 369.0
YHH3_k127_960003_3 Provides the (R)-glutamate required for cell wall biosynthesis K01776 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0034645,GO:0036361,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0047661,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 310.0
YHH3_k127_960003_4 Response regulator receiver K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005975 261.0
YHH3_k127_960003_5 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000009533 194.0
YHH3_k127_960003_6 uses NADH to detoxify nitric oxide (NO), protecting several 4Fe-4S NO-sensitive enzymes. Has at least 2 reductase partners, only one of which (NorW, flavorubredoxin reductase) has been identified. NO probably binds to the di-iron center K05297 - 1.18.1.1 0.0000000000000000000000000008118 112.0
YHH3_k127_960003_7 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000008391 59.0
YHH3_k127_9610727_0 Ion channel K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001699 259.0
YHH3_k127_9610727_1 Protein involved in meta-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000163 171.0
YHH3_k127_9629171_0 response regulator receiver - - - 0.00000000000000000000000000000000000000000000000008356 187.0
YHH3_k127_9629171_1 nitrogen fixation sensor protein fixL K14986 - 2.7.13.3 0.0000000000000000000000000000002912 126.0
YHH3_k127_9633379_0 NB-ARC domain - - - 0.000000000000000000000000000000000000000000004623 179.0
YHH3_k127_9633379_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 0.00001148 48.0
YHH3_k127_9678047_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006809 518.0
YHH3_k127_9678047_1 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 326.0
YHH3_k127_9678047_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000006484 220.0
YHH3_k127_9678047_3 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000002985 186.0
YHH3_k127_9678047_4 Atp-dependent helicase K03578,K03579 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 0.00000000000000000000000000005343 123.0
YHH3_k127_9678047_5 - - - - 0.000000000000007783 78.0
YHH3_k127_9719524_0 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 434.0
YHH3_k127_9719524_1 Lactonase, 7-bladed beta-propeller - - - 0.00000000000000000000000000000000001786 141.0
YHH3_k127_9719524_2 - - - - 0.00000003929 59.0
YHH3_k127_9757106_0 ABC transporter transmembrane region K06147 - - 4.706e-305 943.0
YHH3_k127_9757106_1 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000428 484.0
YHH3_k127_9757106_2 PFAM Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000000000000000000000000000000000000000000000009257 224.0
YHH3_k127_9757106_3 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000000005182 212.0
YHH3_k127_9757106_4 PFAM Cold-shock protein, DNA-binding K03704 - - 0.0000000000000000000000000000007055 121.0
YHH3_k127_9757106_5 - - - - 0.0000000000000000000000000001628 118.0
YHH3_k127_9757106_6 P pilus assembly Cpx signaling pathway, periplasmic inhibitor zinc-resistance associated protein K06006 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0008150,GO:0009987,GO:0010033,GO:0014070,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0044464,GO:0050896,GO:0051082,GO:0061077,GO:1990507 - 0.0000000000000008024 86.0
YHH3_k127_9774983_0 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 301.0
YHH3_k127_9774983_1 Protein conserved in bacteria - - - 0.000000000001813 72.0
YHH3_k127_9834786_0 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006393 286.0
YHH3_k127_9834786_1 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000001483 190.0
YHH3_k127_9835302_0 Glycosyl transferases group 1 - - - 0.000000000000000000000009569 111.0
YHH3_k127_9835302_1 Glycosyl transferases group 1 - - - 0.000009357 57.0
YHH3_k127_9839646_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000678 215.0
YHH3_k127_9839646_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000003082 121.0
YHH3_k127_9839646_2 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000003098 120.0
YHH3_k127_9866869_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1022.0
YHH3_k127_9866869_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 3.936e-304 953.0
YHH3_k127_9866869_2 Participates in both transcription termination and antitermination K02600 - - 5.801e-214 674.0
YHH3_k127_9866869_3 Radical SAM superfamily K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007647 381.0
YHH3_k127_9866869_4 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007144 346.0
YHH3_k127_9866869_5 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000002212 175.0
YHH3_k127_9866869_6 Pkd domain containing protein - - - 0.0000000000000000000000000000000000002746 154.0
YHH3_k127_9866869_7 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.0000000000000000000000000000000175 128.0
YHH3_k127_9866869_8 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030490,GO:0033554,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043021,GO:0043024,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.00000000000000000000000000009296 119.0
YHH3_k127_9871205_0 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 8.715e-252 798.0
YHH3_k127_9871205_1 PFAM Transglycosylase SLT domain K08307 - - 0.0000000000000000000000000000005722 130.0
YHH3_k127_9903251_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 5.299e-239 747.0
YHH3_k127_9903251_1 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 606.0
YHH3_k127_9903251_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 349.0
YHH3_k127_9903251_3 low molecular weight K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000000000000000000000002035 218.0
YHH3_k127_9903251_4 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000003781 209.0
YHH3_k127_9903251_5 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.000000000000000000000000000000000000000000003354 174.0
YHH3_k127_9903251_6 Colicin V production protein K03558 - - 0.0000000000000000000000000000000000000003367 154.0
YHH3_k127_9903251_7 Sporulation related domain K03749 - - 0.0000000000000000000000005456 112.0
YHH3_k127_9909154_0 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000004765 164.0
YHH3_k127_9909154_1 PFAM Type IV pilus assembly PilZ - - - 0.000000000000000000000000000000000001091 142.0
YHH3_k127_9909154_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family K00569 - 2.1.1.67 0.0000000000000000001416 91.0
YHH3_k127_9909154_3 Phosphate ABC transporter substrate-binding protein K02040 - - 0.000000000004917 72.0
YHH3_k127_9918037_0 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000018 167.0
YHH3_k127_9918037_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.0000000000000000000000000000000000000004288 156.0
YHH3_k127_9918037_2 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000000000000001054 95.0
YHH3_k127_9918037_3 Methyltransferase domain - - - 0.0000000000000001454 90.0