Overview

ID MAG04556
Name YHH3_bin.14
Sample SMP0123
Taxonomy
Kingdom Bacteria
Phylum Nitrospirota
Class UBA9217
Order UBA9217
Family UBA9217
Genus JAAXXJ01
Species
Assembly information
Completeness (%) 70.7
Contamination (%) 2.18
GC content (%) 60.0
N50 (bp) 7,903
Genome size (bp) 1,901,316

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1928

Gene name Description KEGG GOs EC E-value Score Sequence
YHH3_k127_10127702_0 belongs to the CobB CobQ family K13788 - 2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005418 516.0
YHH3_k127_10127702_1 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 364.0
YHH3_k127_10127702_2 PFAM 4Fe-4S ferredoxin, iron-sulfur binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000105 241.0
YHH3_k127_10127702_3 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000002571 142.0
YHH3_k127_10130040_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 1.608e-232 730.0
YHH3_k127_10130040_1 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 472.0
YHH3_k127_10130040_2 esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 295.0
YHH3_k127_10130040_3 ferredoxin-thioredoxin reductase activity - - - 0.0000000000000000000000000000000000000001185 152.0
YHH3_k127_10130040_4 Outer membrane lipoprotein Slp family K07285 - - 0.0000000000000000000000000000000000008618 146.0
YHH3_k127_10130040_5 PFAM Glutaredoxin K06191 - - 0.00000000000000000000008225 102.0
YHH3_k127_10219577_0 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 355.0
YHH3_k127_10219577_1 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003213 277.0
YHH3_k127_10219577_2 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002505 267.0
YHH3_k127_10219577_3 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008654,GO:0009029,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0046401,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000000000000127 254.0
YHH3_k127_10219577_4 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000002867 206.0
YHH3_k127_10219577_5 Glycosyl transferases group 1 - - - 0.0000417 51.0
YHH3_k127_10227079_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 591.0
YHH3_k127_10227079_1 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 347.0
YHH3_k127_10227079_2 galactose-1-phosphate uridylyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 339.0
YHH3_k127_10227079_3 membrane organization K20543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009815 269.0
YHH3_k127_10227079_4 ATP synthase subunit D K02120 - - 0.0000000000000000000000000000000000000000000000000000000000000002843 227.0
YHH3_k127_10227079_5 copG family - - - 0.000000000000000000000000000008906 118.0
YHH3_k127_10227079_6 - - - - 0.000000000000005465 81.0
YHH3_k127_10227079_7 NosL K19342 - - 0.00000000000009248 80.0
YHH3_k127_10230121_0 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007925 577.0
YHH3_k127_10230121_1 HlyD membrane-fusion protein of T1SS K03543 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005189 284.0
YHH3_k127_10230121_2 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) - - - 0.000000000000000000000000000000000000000000005948 183.0
YHH3_k127_10230121_3 Sugar (and other) transporter K03446 - - 0.0000000000000000000000005632 105.0
YHH3_k127_10230121_4 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000005618 90.0
YHH3_k127_1023908_0 C-terminal, D2-small domain, of ClpB protein K03696 - - 0.0 1133.0
YHH3_k127_1023908_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 3.656e-284 899.0
YHH3_k127_1023908_10 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007948 542.0
YHH3_k127_1023908_11 Surface antigen K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 524.0
YHH3_k127_1023908_12 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 458.0
YHH3_k127_1023908_13 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 435.0
YHH3_k127_1023908_14 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 391.0
YHH3_k127_1023908_15 MacB-like periplasmic core domain K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 395.0
YHH3_k127_1023908_16 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005303 390.0
YHH3_k127_1023908_17 Type II secretion system (T2SS), protein F K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 389.0
YHH3_k127_1023908_18 Fe-S oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000362 385.0
YHH3_k127_1023908_19 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007588 369.0
YHH3_k127_1023908_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 3.224e-251 801.0
YHH3_k127_1023908_20 Transporter associated domain K03699,K06189 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007428 352.0
YHH3_k127_1023908_21 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004969 333.0
YHH3_k127_1023908_22 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 313.0
YHH3_k127_1023908_23 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 308.0
YHH3_k127_1023908_24 Protein of unknown function (DUF1009) K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 308.0
YHH3_k127_1023908_25 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001051 282.0
YHH3_k127_1023908_26 Involved in the biosynthesis of porphyrin-containing compound - GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006225 281.0
YHH3_k127_1023908_27 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001532 263.0
YHH3_k127_1023908_28 NHL repeat containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003525 259.0
YHH3_k127_1023908_29 PFAM phosphoesterase, RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000004012 259.0
YHH3_k127_1023908_3 polyribonucleotide nucleotidyltransferase activity K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 6.468e-251 792.0
YHH3_k127_1023908_30 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0031119,GO:0034337,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990481 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000005161 256.0
YHH3_k127_1023908_31 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000004058 252.0
YHH3_k127_1023908_32 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 0.000000000000000000000000000000000000000000000000000000000001464 212.0
YHH3_k127_1023908_33 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.000000000000000000000000000000000000000000000000000000000001472 235.0
YHH3_k127_1023908_34 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.0000000000000000000000000000000000000000000000000000007167 197.0
YHH3_k127_1023908_35 Methylates ribosomal protein L11 K02687 - - 0.00000000000000000000000000000000000000000001231 173.0
YHH3_k127_1023908_36 denitrification pathway - - - 0.00000000000000000000000000000000001043 143.0
YHH3_k127_1023908_37 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000001198 140.0
YHH3_k127_1023908_38 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.000000000000000000000000000000001565 136.0
YHH3_k127_1023908_39 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000005752 128.0
YHH3_k127_1023908_4 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 2.348e-205 649.0
YHH3_k127_1023908_40 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.0000000000000000000000000000002162 124.0
YHH3_k127_1023908_41 - - - - 0.0000000000000000000000000004068 120.0
YHH3_k127_1023908_42 Protein of unknown function (DUF503) K09764 - - 0.00000000000000000000000004205 111.0
YHH3_k127_1023908_43 ribosomal protein L7Ae L30e S12e Gadd45 K07742 - - 0.00000000000000000000000005336 114.0
YHH3_k127_1023908_44 PFAM Uncharacterised BCR, COG1649 K11931 - - 0.00000000000001518 85.0
YHH3_k127_1023908_45 Domain of unknown function (DUF374) K09778 - - 0.000000000009485 69.0
YHH3_k127_1023908_46 Late competence development protein ComFB K02241 - - 0.000000007153 61.0
YHH3_k127_1023908_47 PFAM UvrB UvrC protein K08999,K19405,K19411 GO:0003674,GO:0005488,GO:0005507,GO:0006950,GO:0008150,GO:0008270,GO:0010035,GO:0010038,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046688,GO:0046870,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0097501,GO:1990169,GO:1990170 2.7.14.1 0.00000001199 68.0
YHH3_k127_1023908_48 unfolded protein binding K06142 - - 0.00000122 57.0
YHH3_k127_1023908_49 all-trans-retinol 13,14-reductase activity - - - 0.000002722 59.0
YHH3_k127_1023908_5 TIGRFAM type IV-A pilus assembly ATPase PilB K02652 - - 1.386e-194 624.0
YHH3_k127_1023908_6 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 613.0
YHH3_k127_1023908_7 twitching motility protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006278 548.0
YHH3_k127_1023908_8 phosphorelay signal transduction system K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 553.0
YHH3_k127_1023908_9 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005074 554.0
YHH3_k127_10241152_0 Protein of unknown function (DUF401) K09133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005652 299.0
YHH3_k127_10241152_1 Single-strand binding protein family K03111 - - 0.000000000000000000000000000000000000000000004496 167.0
YHH3_k127_10241152_2 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000001475 121.0
YHH3_k127_10300007_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008266 317.0
YHH3_k127_10300007_1 myo-inosose-2 dehydratase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000837 250.0
YHH3_k127_10300007_2 Regulatory protein, FmdB family - - - 0.0000000000000000008123 89.0
YHH3_k127_10300007_3 PFAM Rhodanese domain protein - - - 0.0009967 46.0
YHH3_k127_10318903_0 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 4.836e-316 989.0
YHH3_k127_10318903_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K13378 - 1.6.5.3 2.747e-297 921.0
YHH3_k127_10318903_2 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 9.718e-202 634.0
YHH3_k127_10318903_3 NADH ubiquinone oxidoreductase 24 kD subunit K00334 GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0048037,GO:0050136,GO:0051536,GO:0051537,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000000000000000000000000000001634 199.0
YHH3_k127_10358405_0 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004637 463.0
YHH3_k127_10358405_1 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000442 142.0
YHH3_k127_10358405_2 AsmA-like C-terminal region - - - 0.000000000000000257 91.0
YHH3_k127_10358405_3 - - - - 0.00000000001439 73.0
YHH3_k127_10358405_4 - - - - 0.0000000003111 64.0
YHH3_k127_10358405_5 ribosome binding - - - 0.0001155 49.0
YHH3_k127_10366175_0 Biotin carboxylase K01959,K01961 - 6.3.4.14,6.4.1.1,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000365 615.0
YHH3_k127_10366175_1 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004074 571.0
YHH3_k127_10366175_10 helix_turn_helix, cAMP Regulatory protein - - - 0.0000000000000000000000000000000000000000000000000005704 198.0
YHH3_k127_10366175_11 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000006778 177.0
YHH3_k127_10366175_12 Acetyl-CoA carboxylase, biotin carboxyl carrier protein K01571,K01960 - 4.1.1.3,6.4.1.1 0.0000000000000000000000000000000000000000000008371 170.0
YHH3_k127_10366175_13 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000965 165.0
YHH3_k127_10366175_14 PFAM peptidase M24 K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000001577 119.0
YHH3_k127_10366175_15 Domain of unknown function (DUF1858) - - - 0.000000000000000006258 85.0
YHH3_k127_10366175_16 - - - - 0.00000000000000004674 86.0
YHH3_k127_10366175_17 sodium-dependent phosphate transmembrane transporter activity - - - 0.000000003716 66.0
YHH3_k127_10366175_18 4Fe-4S binding domain - - - 0.000001229 52.0
YHH3_k127_10366175_2 PFAM natural resistance-associated macrophage protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 461.0
YHH3_k127_10366175_3 MgtE intracellular N domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000965 409.0
YHH3_k127_10366175_4 Putative modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008075 391.0
YHH3_k127_10366175_5 Branched-chain amino acid transport system / permease component K01997 GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015175,GO:0015179,GO:0015188,GO:0015190,GO:0015192,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015820,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0043090,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0089718,GO:0098655,GO:0098656,GO:0098657,GO:0098713,GO:0098739,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003929 363.0
YHH3_k127_10366175_6 Receptor family ligand binding region K01999 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006865,GO:0008150,GO:0015711,GO:0015803,GO:0015804,GO:0015818,GO:0015820,GO:0015829,GO:0015849,GO:0016597,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0044464,GO:0046942,GO:0051179,GO:0051234,GO:0070728,GO:0071702,GO:0071705 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004815 367.0
YHH3_k127_10366175_7 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 305.0
YHH3_k127_10366175_8 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006417,GO:0006448,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0072344,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112,GO:2000113,GO:2001124,GO:2001125 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002144 271.0
YHH3_k127_10366175_9 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001232 243.0
YHH3_k127_1039613_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 9.473e-300 939.0
YHH3_k127_1039613_1 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000413 289.0
YHH3_k127_1039613_2 PFAM Hemerythrin HHE cation binding domain K07216 - - 0.000000000000000000000000000000001807 134.0
YHH3_k127_10411420_0 Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 581.0
YHH3_k127_10411420_1 Thiolase, C-terminal domain K00626,K00632 - 2.3.1.16,2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009748 392.0
YHH3_k127_10411420_2 ATP adenylyltransferase K00988 - 2.7.7.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 308.0
YHH3_k127_10411420_3 PFAM ADP-ribosylation Crystallin J1 - - - 0.0000000000000000000000000000000000000000000000000000000000000002075 234.0
YHH3_k127_10411420_4 PFAM Hemerythrin HHE cation binding domain K07216 - - 0.00000000000000000000000000000001015 131.0
YHH3_k127_10411420_5 Uncharacterized conserved protein (DUF2249) - - - 0.0000000000000000000000000001414 115.0
YHH3_k127_10411420_6 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000002809 120.0
YHH3_k127_10411420_7 EamA-like transporter family - - - 0.00000000000001849 77.0
YHH3_k127_10411420_8 electron transfer activity K05337,K17247 - - 0.0000000001848 63.0
YHH3_k127_10607608_0 PEP-utilising enzyme, mobile domain K01006 - 2.7.9.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 547.0
YHH3_k127_10607608_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004205 451.0
YHH3_k127_10614536_0 Phosphoglycerate mutase family K02226 - 3.1.3.73 0.0000000000000000000000000000000000000000000000000000003212 199.0
YHH3_k127_10614536_1 Protein of unknown function (DUF3047) - - - 0.0000000000000000000000000000000000000000000000003697 183.0
YHH3_k127_10614536_2 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.000000000000000000000000000000000000000000000001805 180.0
YHH3_k127_10614536_3 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.00000000000000000000000000000000000000000003496 170.0
YHH3_k127_10614536_4 Domain of unknown function (DUF4384) - - - 0.0000000000000000001698 98.0
YHH3_k127_10627523_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 461.0
YHH3_k127_10627523_1 SMART metal-dependent phosphohydrolase, HD region K06950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003136 259.0
YHH3_k127_10627523_2 Chromate resistance exported protein - - - 0.000000000000000000000000000000000000000000000000000000000000005005 228.0
YHH3_k127_10627523_3 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.000000000000000000000000000000000000000000000000000000001313 203.0
YHH3_k127_10627523_4 SMART metal-dependent phosphohydrolase, HD region K06950 - - 0.0000000000001261 74.0
YHH3_k127_10631587_0 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000007648 205.0
YHH3_k127_10631587_1 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000001579 103.0
YHH3_k127_10631587_2 PFAM Glycosyl transferase, group 1 - - - 0.00000001905 65.0
YHH3_k127_10637580_0 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 379.0
YHH3_k127_10637580_1 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008794 377.0
YHH3_k127_10637580_10 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 - 5.2.1.8 0.0000007692 60.0
YHH3_k127_10637580_11 Histidine kinase K02482 - 2.7.13.3 0.000001462 61.0
YHH3_k127_10637580_2 Surface antigen K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 368.0
YHH3_k127_10637580_3 NADH flavin oxidoreductase NADH oxidase K00354 - 1.6.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 327.0
YHH3_k127_10637580_4 TIGRFAM signal peptide peptidase SppA, 36K type K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282 310.0
YHH3_k127_10637580_5 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008867 272.0
YHH3_k127_10637580_6 PIN domain - - - 0.00000000000000000000000000000000000002265 147.0
YHH3_k127_10637580_7 TIGRFAM looped-hinge helix DNA binding domain, AbrB family - - - 0.000000000000000000000002086 105.0
YHH3_k127_10637580_8 Diguanylate cyclase - - - 0.0000000000000000001371 104.0
YHH3_k127_10637580_9 Membrane - - - 0.00000000000008966 73.0
YHH3_k127_10642029_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000009362 230.0
YHH3_k127_10642029_1 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000004166 144.0
YHH3_k127_10642029_2 - - - - 0.0000000000000000000000002092 115.0
YHH3_k127_10642029_3 PFAM peptidase M28 - - - 0.0000000000000000006181 90.0
YHH3_k127_10642029_4 PFAM amino acid-binding ACT domain protein - - - 0.00000005463 62.0
YHH3_k127_10708797_0 Nitrogenase component 1 type Oxidoreductase K02587 - - 1.391e-294 929.0
YHH3_k127_10708797_1 Nitrogen regulatory protein P-II K02589 - - 0.0000000000000000000000000000000000000000000000000006054 185.0
YHH3_k127_10708797_2 Nitrogen regulatory protein P-II K02590 - - 0.00000000000000000000000000000000000000000000000002905 181.0
YHH3_k127_10708797_3 Dinitrogenase iron-molybdenum cofactor K02596 - - 0.000000000000000000000000000000000000000000009269 165.0
YHH3_k127_10708797_4 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000001505 150.0
YHH3_k127_10708797_5 cofactor biosynthesis protein NifB K02585 - - 0.00000000000000000000000000000000005323 138.0
YHH3_k127_10708797_6 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000005729 126.0
YHH3_k127_10807363_0 Elongator protein 3, MiaB family, Radical SAM K02585 - - 0.000000000000000000000000000000000000000000000000000000000000000004966 232.0
YHH3_k127_10807363_1 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.00000000000000000000000000000000000000000000000000000000000008911 230.0
YHH3_k127_10963544_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 621.0
YHH3_k127_10963544_1 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.000000000000000000002415 96.0
YHH3_k127_10963544_2 Thiolase, C-terminal domain K00626,K00632 - 2.3.1.16,2.3.1.9 0.00008326 45.0
YHH3_k127_11048720_0 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 483.0
YHH3_k127_11048720_1 Memo-like protein K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009604 274.0
YHH3_k127_11048720_2 NosL - - - 0.00000000000000000000000000000000000000000000000000000000009668 214.0
YHH3_k127_11048720_3 AAA domain, putative AbiEii toxin, Type IV TA system K02003 - - 0.00000000000000000000000000000000000000000000000004603 192.0
YHH3_k127_11048720_4 NosL - - - 0.000000000000000000000000000000000000000000000001225 178.0
YHH3_k127_11048720_5 DJ-1/PfpI family K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000002409 172.0
YHH3_k127_11048720_6 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.00000000000000000000000000000000000000003507 154.0
YHH3_k127_11048720_7 - - - - 0.00000000000000000000002997 102.0
YHH3_k127_11048720_8 signal-transduction protein containing cAMP-binding and CBS domains K07315 - 3.1.3.3 0.00000000000000001815 92.0
YHH3_k127_11048720_9 signal-transduction protein containing cAMP-binding and CBS domains K07315 - 3.1.3.3 0.0000000000000004172 88.0
YHH3_k127_11057809_0 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 1.419e-240 755.0
YHH3_k127_11057809_1 pilus assembly protein K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000647 346.0
YHH3_k127_11057809_2 Pilus assembly protein, PilO K02664 - - 0.0000000000000000000000121 108.0
YHH3_k127_11057809_3 Fimbrial assembly protein (PilN) K02663 - - 0.000000000000000000006809 100.0
YHH3_k127_11057809_4 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K11686,K13640,K18997 - - 0.00000000000000011 82.0
YHH3_k127_11081770_0 General secretory system II, protein E domain protein K02652 - - 6.689e-219 692.0
YHH3_k127_11081770_1 Type II secretion system (T2SS), protein F K02455,K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005418 263.0
YHH3_k127_11081770_2 Outer membrane lipoprotein Slp family K07285 - - 0.0000000000000000000000000000000000000004241 154.0
YHH3_k127_11081770_3 PFAM Hemerythrin HHE cation binding domain K07216 - - 0.00000000000000000000008827 102.0
YHH3_k127_11081770_4 Putative prokaryotic signal transducing protein - - - 0.0000000000000000008224 92.0
YHH3_k127_11093689_0 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005546 580.0
YHH3_k127_11093689_1 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008864 444.0
YHH3_k127_11093689_2 Trypsin K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004612 447.0
YHH3_k127_11093689_3 Large family of predicted nucleotide-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006061 336.0
YHH3_k127_11093689_4 Transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005616 325.0
YHH3_k127_11093689_5 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 317.0
YHH3_k127_11093689_6 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 0.000000000000000000000000000000000000000000000007291 179.0
YHH3_k127_11093689_7 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000000000000000000000001115 170.0
YHH3_k127_11116403_0 PFAM ABC transporter related K06020 - 3.6.3.25 1.839e-301 930.0
YHH3_k127_11116403_1 Cytochrome b/b6/petB K03887 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000721 271.0
YHH3_k127_11116403_10 - - - - 0.00000001788 62.0
YHH3_k127_11116403_11 - - - - 0.00000003031 56.0
YHH3_k127_11116403_12 SurA N-terminal domain K03771 - 5.2.1.8 0.0003947 51.0
YHH3_k127_11116403_2 - K07112 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000003534 195.0
YHH3_k127_11116403_3 Protein of unknown function (DUF1255) K09913 - 2.4.2.1,2.4.2.2 0.000000000000000000000000000000000000000000000000004358 182.0
YHH3_k127_11116403_4 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000001048 188.0
YHH3_k127_11116403_5 LemA family K03744 - - 0.0000000000000000000000000000000000000000000008336 172.0
YHH3_k127_11116403_6 Rieske [2Fe-2S] domain K02636,K03886 - 1.10.9.1 0.00000000000000000000000000008624 121.0
YHH3_k127_11116403_9 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000002506 64.0
YHH3_k127_11176988_0 PEP-utilising enzyme, N-terminal K02768,K08483,K11183 - 2.7.1.202,2.7.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008349 586.0
YHH3_k127_11176988_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000778 445.0
YHH3_k127_11176988_10 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000004621 185.0
YHH3_k127_11176988_11 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.0000000000000000000000000000000000000005109 157.0
YHH3_k127_11176988_12 PTS system mannose/fructose/sorbose family IID component K02796 - - 0.000000000000000000000000000000000001189 150.0
YHH3_k127_11176988_13 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02806 - - 0.0000000000000000000000000000004257 127.0
YHH3_k127_11176988_14 PTS system sorbose subfamily IIB component K02769,K02793,K02794 - 2.7.1.191,2.7.1.202 0.0000000000000000000000000000005887 127.0
YHH3_k127_11176988_15 COG2893 Phosphotransferase system, mannose fructose-specific component IIA K02793 - 2.7.1.191 0.00000000000000000000000000001317 122.0
YHH3_k127_11176988_16 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.000000000000000000000000000165 117.0
YHH3_k127_11176988_17 PFAM V-type ATPase 116 kDa K02123 - - 0.000000000000000000000004297 104.0
YHH3_k127_11176988_18 OstA-like protein K09774 - - 0.000000000000000000000005773 109.0
YHH3_k127_11176988_19 phosphocarrier protein hpr K08485,K11189 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006808,GO:0006810,GO:0008150,GO:0008152,GO:0008643,GO:0009401,GO:0009987,GO:0010033,GO:0010243,GO:0016310,GO:0016740,GO:0016772,GO:0019538,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0065007,GO:0071702,GO:0071704,GO:1901564,GO:1901698 - 0.00000000000000000000002128 104.0
YHH3_k127_11176988_2 lipopolysaccharide transport protein B ATP-binding component of ABC superfamily K01990,K06861 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 317.0
YHH3_k127_11176988_20 PTS system sorbose-specific iic component K02795 - - 0.00000000000000002302 92.0
YHH3_k127_11176988_21 Lipopolysaccharide-assembly, LptC-related - - - 0.000002492 57.0
YHH3_k127_11176988_3 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004746 296.0
YHH3_k127_11176988_4 Bacterial protein of unknown function (DUF853) K06915 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001111 282.0
YHH3_k127_11176988_5 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000181 278.0
YHH3_k127_11176988_6 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001073 262.0
YHH3_k127_11176988_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000001649 229.0
YHH3_k127_11176988_8 - - - - 0.000000000000000000000000000000000000000000000000000000000003463 221.0
YHH3_k127_11176988_9 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000003977 207.0
YHH3_k127_11215725_0 PFAM flavin reductase domain protein FMN-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000006608 230.0
YHH3_k127_11215725_1 SnoaL-like domain - - - 0.000000000000000000000000000000000001495 145.0
YHH3_k127_11215725_2 PFAM NADH flavin oxidoreductase NADH oxidase K10680 - - 0.0000000000000000000000000000000003237 132.0
YHH3_k127_11215725_3 Pfam:Pyridox_oxidase - - - 0.00000000000000000000008499 100.0
YHH3_k127_11218577_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11747 - - 1.245e-228 724.0
YHH3_k127_11218577_1 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004582 446.0
YHH3_k127_11218577_2 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.11.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 434.0
YHH3_k127_11218577_3 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001511 283.0
YHH3_k127_11218577_4 Flavodoxin-like fold K03923,K11748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001508 254.0
YHH3_k127_11218577_5 protocatechuate 3,4-dioxygenase activity K03381 - 1.13.11.1 0.00000000000000000000000000000000001227 137.0
YHH3_k127_11218577_6 Copper/zinc superoxide dismutase (SODC) K04565 - 1.15.1.1 0.0000000000000000000000000000000938 128.0
YHH3_k127_11218577_7 - - - - 0.00000000000003446 78.0
YHH3_k127_11262520_0 aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000009636 169.0
YHH3_k127_11262520_1 Long-chain acyl-CoA synthetase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000005356 170.0
YHH3_k127_11315769_0 Protein of unknown function (DUF1847) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 386.0
YHH3_k127_11315769_1 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002289 259.0
YHH3_k127_11315769_2 PFAM Cytochrome C biogenesis protein transmembrane region K06196 - - 0.00000000000000000000000000000000000000000000000002358 185.0
YHH3_k127_11315769_3 cheY-homologous receiver domain K03413 - - 0.00000000003234 73.0
YHH3_k127_11315769_4 PilZ domain - - - 0.0000257 55.0
YHH3_k127_11357999_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009425 570.0
YHH3_k127_11357999_1 Belongs to the cysteine synthase cystathionine beta- synthase family K01883,K12339 - 2.5.1.47,6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 335.0
YHH3_k127_11357999_2 CHAT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001305 273.0
YHH3_k127_11357999_3 Nitroreductase family - - - 0.00000000000000000000000000000000009564 143.0
YHH3_k127_11357999_4 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000005855 120.0
YHH3_k127_11357999_6 Prokaryotic homologs of the JAB domain - - - 0.00000000000006932 77.0
YHH3_k127_11417931_0 PAS domain K13598 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 526.0
YHH3_k127_11417931_1 PFAM UvrB UvrC protein K08999,K19405,K19411 GO:0003674,GO:0005488,GO:0005507,GO:0006950,GO:0008150,GO:0008270,GO:0010035,GO:0010038,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046688,GO:0046870,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0097501,GO:1990169,GO:1990170 2.7.14.1 0.000000000000000000000000000000000000000000000003451 196.0
YHH3_k127_11417931_2 Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine 7-oxoG) from DNA. Also nicks DNA at apurinic apyrimidinic sites (AP sites) K03653 - 4.2.99.18 0.00000000000000000000000000000000001165 143.0
YHH3_k127_11417931_3 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000003849 112.0
YHH3_k127_11417931_4 NHL repeat - - - 0.000000000000000000000005521 119.0
YHH3_k127_11417931_5 Rhodanese Homology Domain - - - 0.00000000000000001111 88.0
YHH3_k127_11417931_6 PFAM Peptidoglycan-binding lysin domain - - - 0.00000000000001721 79.0
YHH3_k127_11417931_7 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0000003394 64.0
YHH3_k127_11450188_0 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005179 372.0
YHH3_k127_11450188_1 PFAM peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003896 326.0
YHH3_k127_11450188_2 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005566 310.0
YHH3_k127_11450188_3 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000000000349 156.0
YHH3_k127_11450414_0 Flotillin K07192 - - 4.208e-231 724.0
YHH3_k127_11450414_1 - - - - 0.000000000000000000000000000000000000000000000000000000001292 207.0
YHH3_k127_11450414_2 TPR repeat - - - 0.0000000000000000000000000000000000000000000000000008128 191.0
YHH3_k127_11503915_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001935 277.0
YHH3_k127_11503915_1 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003355 262.0
YHH3_k127_11503915_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003773 255.0
YHH3_k127_11503915_3 OsmC-like protein K09136 - - 0.000000000000000000000000000000000000000000004513 166.0
YHH3_k127_11503915_4 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000003934 102.0
YHH3_k127_11503915_5 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0031123,GO:0031404,GO:0032991,GO:0033204,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042301,GO:0042779,GO:0042780,GO:0042781,GO:0043167,GO:0043168,GO:0043170,GO:0043199,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901681,GO:1902494,GO:1902555,GO:1905267,GO:1905348,GO:1990904 3.1.26.5 0.0000000000003084 75.0
YHH3_k127_11503915_6 Belongs to the bacterial ribosomal protein bL34 family K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000002468 57.0
YHH3_k127_11533183_0 Domain in cystathionine beta-synthase and other proteins. K07182 - - 1.173e-234 741.0
YHH3_k127_11533183_1 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000001168 148.0
YHH3_k127_11533183_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000005684 137.0
YHH3_k127_11533183_3 Domain of unknown function (DUF4212) - - - 0.0000000000000004994 79.0
YHH3_k127_11557464_0 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 526.0
YHH3_k127_11576347_0 FAD binding domain K00394 - 1.8.99.2 0.0 1059.0
YHH3_k127_11576347_1 Belongs to the sulfate adenylyltransferase family K00958,K13811 - 2.7.1.25,2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007488 597.0
YHH3_k127_11576347_2 FAD dependent oxidoreductase K16885 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004551 532.0
YHH3_k127_11576347_3 Methyl-viologen-reducing hydrogenase, delta subunit K03388,K16885,K16886 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 431.0
YHH3_k127_11576347_4 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 316.0
YHH3_k127_11576347_5 Adenosine-5'-phosphosulfate reductase beta subunit K00395 - 1.8.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000001277 241.0
YHH3_k127_11576347_6 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000005743 230.0
YHH3_k127_11576347_7 Beta-lactamase K01256,K17836 - 3.4.11.2,3.5.2.6 0.00000000004619 74.0
YHH3_k127_11635413_0 Mut7-C RNAse domain K09122 - - 0.00000000000000000000000000004269 122.0
YHH3_k127_11635413_1 E1-E2 ATPase K17686 - 3.6.3.54 0.000000000000000000000062 98.0
YHH3_k127_11645761_0 - - - - 0.00000000000000000000000000000000000000000000000000000054 199.0
YHH3_k127_11645761_1 Protein of unknown function DUF86 - - - 0.0000000000000000000000000000000007982 133.0
YHH3_k127_11645761_2 PFAM Nucleotidyltransferase domain K07075 - - 0.00000000000000000000000000001707 119.0
YHH3_k127_11645761_3 - - - - 0.00003331 46.0
YHH3_k127_11658652_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1108.0
YHH3_k127_11658652_1 - K07112 - - 0.00000000000000000000000000000000000000000000000000000000000282 215.0
YHH3_k127_11658652_2 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K00406,K01011,K07112 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000001148 121.0
YHH3_k127_11658652_3 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000000001008 109.0
YHH3_k127_11658652_4 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.000000000000000000000313 99.0
YHH3_k127_11658652_5 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K00406,K01011,K07112 - 2.8.1.1,2.8.1.2 0.0000000000002127 72.0
YHH3_k127_11658652_6 Peptidase, M23 family - - - 0.0000000000003417 69.0
YHH3_k127_11687663_0 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000000584 119.0
YHH3_k127_11687663_1 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000001884 115.0
YHH3_k127_11687663_2 Glycosyltransferase family 9 (heptosyltransferase) K02841 - - 0.00000000000000009143 80.0
YHH3_k127_11687663_3 Protein of unknown function (DUF1566) - - - 0.0000000000000005639 85.0
YHH3_k127_11687663_4 FecR protein - - - 0.0009807 51.0
YHH3_k127_11737576_0 4Fe-4S binding domain - - - 9.058e-221 695.0
YHH3_k127_11737576_1 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 364.0
YHH3_k127_11737576_2 Protein of unknown function (DUF559) - - - 0.00000000000000000000000000000000002103 139.0
YHH3_k127_11757899_0 MotA/TolQ/ExbB proton channel family K03561,K03562 - - 0.0000000000000000000000000000000000000000000002316 176.0
YHH3_k127_11757899_1 Biopolymer transport protein ExbD/TolR K03560 - - 0.00000000000000000000000000000000004817 138.0
YHH3_k127_11757899_2 MoeA domain protein domain I and II K03750,K07219 - 2.10.1.1 0.00000000000000000001438 93.0
YHH3_k127_11796967_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 2.292e-203 636.0
YHH3_k127_11796967_1 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004075 340.0
YHH3_k127_11796967_2 -O-antigen K02847 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 299.0
YHH3_k127_11796967_3 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000005687 246.0
YHH3_k127_11796967_4 Glycosyltransferase Family 4 - - - 0.00000003367 59.0
YHH3_k127_11808329_0 Signal transducing histidine kinase, homodimeric domain K02487,K03407,K06596 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008818 523.0
YHH3_k127_11808329_1 cheY-homologous receiver domain - - - 0.0000000000000000000000001448 111.0
YHH3_k127_11808329_2 chemotaxis K03408 - - 0.000000001918 64.0
YHH3_k127_11808329_3 Two component signalling adaptor domain K03408 - - 0.0000003182 60.0
YHH3_k127_1184810_0 Two component, sigma54 specific, transcriptional regulator, Fis family K02667,K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005087 435.0
YHH3_k127_1184810_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000353 233.0
YHH3_k127_1184810_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000006897 227.0
YHH3_k127_1184810_3 Pfam Response regulator receiver - - - 0.0000000000000000000000000000000001367 136.0
YHH3_k127_1184810_4 Peptidase U62 modulator of DNA gyrase K03568 - - 0.000000000000000000000004926 104.0
YHH3_k127_1184810_5 drug transmembrane transporter activity K03327 - - 0.000000000000000002196 86.0
YHH3_k127_1184810_6 Methyltransferase domain K16215 - 2.1.1.243 0.0000000003663 72.0
YHH3_k127_11859634_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001603 301.0
YHH3_k127_11859634_1 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000009327 215.0
YHH3_k127_11859634_2 Putative MetA-pathway of phenol degradation - - - 0.0000000000000000000008278 96.0
YHH3_k127_11909157_0 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.000000000000000000000000000000000000000000000000000000000000365 219.0
YHH3_k127_11909157_1 MoaE protein K03635 - 2.8.1.12 0.00000000000000000000000000000000000000000000008402 178.0
YHH3_k127_11909157_2 PFAM Formiminotransferase-cyclodeaminase - - - 0.000000000000000000000000000000000000000000323 166.0
YHH3_k127_11909157_3 Transcriptional regulator, MerR family - - - 0.00000000000000000000000000004098 121.0
YHH3_k127_11909157_4 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000003351 60.0
YHH3_k127_11909157_5 metalloendopeptidase activity K03799 - - 0.000000273 57.0
YHH3_k127_11921796_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 5.545e-195 615.0
YHH3_k127_11921796_1 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000385 546.0
YHH3_k127_11921796_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 310.0
YHH3_k127_11921796_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001956 289.0
YHH3_k127_11921796_4 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004092 283.0
YHH3_k127_11921796_5 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000002286 237.0
YHH3_k127_11921796_6 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000001121 204.0
YHH3_k127_1196085_0 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 550.0
YHH3_k127_1196085_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 512.0
YHH3_k127_1196085_2 PFAM Phage derived protein Gp49-like (DUF891) - - - 0.000000000000000000000000000000000000001094 150.0
YHH3_k127_1196085_3 Helix-turn-helix domain - - - 0.0000000000000000000000000001441 117.0
YHH3_k127_1196085_4 tyrosine recombinase K04763 - - 0.00000000000000000000001213 103.0
YHH3_k127_11963905_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0006457,GO:0008150,GO:0009987 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005207 355.0
YHH3_k127_11963905_1 PFAM regulatory protein, MerR K13640 - - 0.00000000000000000000000000000004457 132.0
YHH3_k127_11963905_2 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.000000006051 59.0
YHH3_k127_12007224_0 Glycosyl hydrolase 36 superfamily, catalytic domain - - - 5.179e-264 819.0
YHH3_k127_12007224_1 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000001864 82.0
YHH3_k127_12007224_2 Leucine-rich repeat (LRR) protein - - - 0.0000000000004404 81.0
YHH3_k127_12080373_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 5.201e-250 782.0
YHH3_k127_12080373_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 583.0
YHH3_k127_12080373_10 Phosphomethylpyrimidine kinase K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009171 323.0
YHH3_k127_12080373_11 RmlD substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004304 307.0
YHH3_k127_12080373_12 Cytidylyltransferase K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001616 285.0
YHH3_k127_12080373_13 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000001718 255.0
YHH3_k127_12080373_14 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000000000000000000002986 235.0
YHH3_k127_12080373_15 DNA integration - - - 0.0000000000000000000000000000000000000000000000000000000000000004797 237.0
YHH3_k127_12080373_16 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000001958 201.0
YHH3_k127_12080373_17 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000001613 186.0
YHH3_k127_12080373_18 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000008851 166.0
YHH3_k127_12080373_19 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.5 0.000000000000000000000000000000000000000005481 161.0
YHH3_k127_12080373_2 PFAM NAD-dependent epimerase dehydratase K08678 - 4.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005289 507.0
YHH3_k127_12080373_20 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000003696 145.0
YHH3_k127_12080373_21 electron transfer activity K05337,K17247 - - 0.00000000000000000007367 91.0
YHH3_k127_12080373_22 Cytochrome C oxidase, mono-heme subunit/FixO K00405 - - 0.000000001866 63.0
YHH3_k127_12080373_3 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 497.0
YHH3_k127_12080373_4 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282 447.0
YHH3_k127_12080373_5 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 445.0
YHH3_k127_12080373_6 SIS domain K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009568 402.0
YHH3_k127_12080373_7 PFAM DAHP synthetase I KDSA K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007958 390.0
YHH3_k127_12080373_8 Glycosyltransferase family 9 (heptosyltransferase) K02843,K02849 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002875 381.0
YHH3_k127_12080373_9 SMART Elongator protein 3 MiaB NifB K18707 - 2.8.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002289 379.0
YHH3_k127_12093958_0 OmpA family K02557 - - 0.0000000000000000000000000000000000001565 151.0
YHH3_k127_12103095_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005119 447.0
YHH3_k127_12103095_1 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 360.0
YHH3_k127_12103095_2 COG4591 ABC-type transport system, involved in lipoprotein release, permease component K02004 - - 0.0000000003799 61.0
YHH3_k127_12143800_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652 - 2.3.1.29,2.3.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008012 411.0
YHH3_k127_12143800_1 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012,K16180 - 2.8.1.6,5.4.99.58 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003043 312.0
YHH3_k127_12143800_2 PFAM short chain dehydrogenase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000006363 224.0
YHH3_k127_12143800_3 6-carboxyhexanoate--CoA ligase K01906 - 6.2.1.14 0.000000000000000000000000000000000000000000000000000000006013 208.0
YHH3_k127_12143800_4 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000001442 114.0
YHH3_k127_12164948_0 COG1104 Cysteine sulfinate desulfinase cysteine desulfurase K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004856 491.0
YHH3_k127_12164948_1 Mechanosensitive ion channel K03442 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006921 367.0
YHH3_k127_12164948_2 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 343.0
YHH3_k127_12164948_3 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006105 293.0
YHH3_k127_12164948_4 Fe-S iron-sulfur cluster assembly protein, NifU family K04488 - - 0.00000000000000000000000000000000000000000000000000000001984 200.0
YHH3_k127_12164948_5 TIGRFAM transcriptional regulator, Rrf2 family - - - 0.0000000000000000000000000000000000000000005517 162.0
YHH3_k127_12164948_6 Bifunctional nuclease K08999 - - 0.00000000000000000000000000000000000005596 151.0
YHH3_k127_12164948_7 Belongs to the sulfur carrier protein TusA family - - - 0.0000000000000000001412 94.0
YHH3_k127_12164948_8 PFAM 4Fe-4S ferredoxin - - - 0.00000000000001028 86.0
YHH3_k127_12166250_0 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000005061 190.0
YHH3_k127_12166250_1 diguanylate cyclase - - - 0.0000000000000000000000000000000000007937 158.0
YHH3_k127_12166250_2 Domain of unknown function (DUF3786) - - - 0.0000000000000000000000000000000001661 141.0
YHH3_k127_12166250_3 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 0.0000000000000000000000007173 104.0
YHH3_k127_12166250_4 - - - - 0.000000000000000000162 93.0
YHH3_k127_12399309_0 PFAM N-acetylneuraminic acid synthase K01654,K15898 - 2.5.1.56,2.5.1.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 518.0
YHH3_k127_12399309_1 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 455.0
YHH3_k127_12399309_2 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002747 276.0
YHH3_k127_12399309_3 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.00000000000000000000000000000000000000000000000002098 202.0
YHH3_k127_12399309_4 COG3980 Spore coat polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000009094 171.0
YHH3_k127_12399309_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000003263 158.0
YHH3_k127_12400584_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2064.0
YHH3_k127_12400584_1 RNA polymerase beta subunit external 1 domain K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1707.0
YHH3_k127_12400584_10 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000000001971 88.0
YHH3_k127_12400584_11 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000004648 80.0
YHH3_k127_12400584_12 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000008689 80.0
YHH3_k127_12400584_13 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03073 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000006782 63.0
YHH3_k127_12400584_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1049.0
YHH3_k127_12400584_3 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 326.0
YHH3_k127_12400584_4 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000003048 229.0
YHH3_k127_12400584_5 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000008389 229.0
YHH3_k127_12400584_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000000000000005675 224.0
YHH3_k127_12400584_7 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000002665 217.0
YHH3_k127_12400584_8 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000000004144 181.0
YHH3_k127_12400584_9 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000001732 174.0
YHH3_k127_12412027_0 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 494.0
YHH3_k127_12412027_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000759 253.0
YHH3_k127_12412027_2 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000001029 215.0
YHH3_k127_12412027_3 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000001711 200.0
YHH3_k127_12412027_4 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000000000000000000000000000002613 154.0
YHH3_k127_12412027_5 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000001874 136.0
YHH3_k127_12412027_6 TIGRFAM transcriptional regulator, AbrB family - - - 0.000000000000000001476 87.0
YHH3_k127_12436908_0 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015175,GO:0015179,GO:0015188,GO:0015192,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 365.0
YHH3_k127_12436908_1 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008843 314.0
YHH3_k127_12436908_2 PFAM ABC transporter related K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 291.0
YHH3_k127_12436908_3 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 289.0
YHH3_k127_12436908_4 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000064 247.0
YHH3_k127_12436908_5 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001958 233.0
YHH3_k127_12436908_6 PFAM transglutaminase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000101 235.0
YHH3_k127_12436908_7 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.00000000000000000000000000000000000000000000001759 173.0
YHH3_k127_12436908_8 Transcriptional regulator - - - 0.00001608 50.0
YHH3_k127_12436908_9 - - - - 0.0001615 51.0
YHH3_k127_12483976_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 520.0
YHH3_k127_12483976_1 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005602 298.0
YHH3_k127_12483976_2 PFAM Rhodanese domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002003 275.0
YHH3_k127_12483976_3 thiosulfate sulfurtransferase activity - - - 0.000000000000000000000000000000000000000000000000001623 192.0
YHH3_k127_12483976_4 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000317 160.0
YHH3_k127_12483976_5 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000006071 151.0
YHH3_k127_12483976_6 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000007613 128.0
YHH3_k127_12483976_7 Belongs to the ABC transporter superfamily K02032 - - 0.00000006117 57.0
YHH3_k127_12577602_0 4Fe-4S dicluster domain - - - 4.313e-209 653.0
YHH3_k127_12577602_1 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 522.0
YHH3_k127_12577602_2 ATPase, AAA K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006088 487.0
YHH3_k127_12577602_3 Endoribonuclease that initiates mRNA decay K18682 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 486.0
YHH3_k127_12577602_4 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 357.0
YHH3_k127_12577602_5 nucleic acid binding OB-fold tRNA helicase-type K03698 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411 326.0
YHH3_k127_12577602_6 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 321.0
YHH3_k127_12577602_7 - - - - 0.00000000000000000000000000000000000000004818 156.0
YHH3_k127_12577602_8 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000001551 72.0
YHH3_k127_1259391_0 Thioredoxin-like domain K03671 - - 0.0000000000000000000000000000000000000000000319 162.0
YHH3_k127_1259391_1 Thioredoxin-like - - - 0.000000000000000000000000000000003985 138.0
YHH3_k127_1259391_2 Protein of unknown function (DUF3047) - - - 0.00000000000000001233 87.0
YHH3_k127_1259391_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000001958 69.0
YHH3_k127_1259391_4 Belongs to the SAICAR synthetase family K01923,K01945 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6,6.3.4.13 0.000009186 53.0
YHH3_k127_12596317_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003611 595.0
YHH3_k127_12596317_1 peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004747 437.0
YHH3_k127_12596317_2 peptidase C14 caspase catalytic subunit p20 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 425.0
YHH3_k127_12596317_3 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000006477 238.0
YHH3_k127_12596317_4 phosphoribosylanthranilate isomerase activity K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000004661 225.0
YHH3_k127_12596317_5 Belongs to the TrpC family K01609 - 4.1.1.48 0.000000000000000000000000002829 113.0
YHH3_k127_12627263_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007115 401.0
YHH3_k127_12627263_1 Peptidase C26 K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006053 299.0
YHH3_k127_12627263_2 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000004784 152.0
YHH3_k127_12627263_3 Belongs to the TrpC family K01609,K13498 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48,5.3.1.24 0.0004591 45.0
YHH3_k127_12665694_0 Putative beta-barrel porin 2 K20920 - - 0.0000000000000000000000000000000003936 146.0
YHH3_k127_12716445_0 Citrate transporter - - - 0.00000000000000000000003299 109.0
YHH3_k127_12716445_1 PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000004191 76.0
YHH3_k127_12716445_2 histidine kinase A domain protein - - - 0.000000000006586 75.0
YHH3_k127_12716445_3 Uncharacterized ACR, COG1430 K09005 - - 0.0000000004902 69.0
YHH3_k127_1272272_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 1.869e-207 659.0
YHH3_k127_1272272_1 4Fe-4S ferredoxin iron-sulfur binding domain protein K07138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004552 422.0
YHH3_k127_1272272_2 Belongs to the LarC family K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 385.0
YHH3_k127_1272272_3 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 373.0
YHH3_k127_1272272_4 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 292.0
YHH3_k127_1272272_5 Evidence 4 Homologs of previously reported genes of K02016 - - 0.00000000000000000000000000000000000000000000006773 173.0
YHH3_k127_1272272_6 protein encoded in hypervariable junctions of pilus gene clusters - - - 0.00000004526 54.0
YHH3_k127_12740466_0 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000359 505.0
YHH3_k127_12740466_1 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007945 301.0
YHH3_k127_12740466_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 296.0
YHH3_k127_12740466_3 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000002207 96.0
YHH3_k127_12740466_4 Pseudouridine synthase K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.0000355 46.0
YHH3_k127_12783868_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.481e-294 925.0
YHH3_k127_12783868_1 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006983 374.0
YHH3_k127_12783868_10 PFAM HAMP domain - - - 0.00000000000000000000000000000000000008784 154.0
YHH3_k127_12783868_11 Belongs to the small heat shock protein (HSP20) family - - - 0.00000000000000000001521 96.0
YHH3_k127_12783868_2 N-terminal domain of galactosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005951 370.0
YHH3_k127_12783868_3 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003743 308.0
YHH3_k127_12783868_4 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000000000004467 217.0
YHH3_k127_12783868_5 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.000000000000000000000000000000000000000000000000000000000003165 217.0
YHH3_k127_12783868_6 Peptidase S24-like K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000001893 203.0
YHH3_k127_12783868_7 - - - - 0.000000000000000000000000000000000000000000000000001409 185.0
YHH3_k127_12783868_8 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000001547 176.0
YHH3_k127_12783868_9 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.000000000000000000000000000000000000006997 148.0
YHH3_k127_12889220_0 isocitrate dehydrogenase activity K00031 GO:0000287,GO:0003674,GO:0003824,GO:0004448,GO:0004450,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006102,GO:0008150,GO:0008152,GO:0008270,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016614,GO:0016616,GO:0016999,GO:0017144,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044464,GO:0045333,GO:0046487,GO:0046872,GO:0046914,GO:0055114,GO:0071704,GO:0071944,GO:0072350 1.1.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000554 570.0
YHH3_k127_12889220_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000003127 233.0
YHH3_k127_12889220_2 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis - - - 0.000000000000000000000000000000000000000000001115 170.0
YHH3_k127_12889220_3 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000002203 154.0
YHH3_k127_12889220_4 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000001489 135.0
YHH3_k127_1326946_0 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008936 293.0
YHH3_k127_1326946_1 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.000000000000000000000000000000000000001374 148.0
YHH3_k127_1326946_2 PFAM metal-dependent phosphohydrolase, HD sub domain K06950 - - 0.0000000000000000000000000000000000002071 146.0
YHH3_k127_1341809_0 extracellular solute-binding protein, family 5 K02035,K15584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005291 404.0
YHH3_k127_1341809_1 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0022857,GO:0051179,GO:0051234,GO:0055085 - 0.0000000000000000000000000000000000000000000000000008385 196.0
YHH3_k127_1428770_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 7.116e-210 661.0
YHH3_k127_1428770_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008974 396.0
YHH3_k127_1428770_2 TIGR00255 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001324 241.0
YHH3_k127_1428770_3 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000001616 224.0
YHH3_k127_1428770_4 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000004207 214.0
YHH3_k127_1428770_5 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000003286 61.0
YHH3_k127_1428770_6 Tetratricopeptide repeat - - - 0.0000647 52.0
YHH3_k127_1429353_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 3.669e-278 870.0
YHH3_k127_1429353_1 drug transmembrane transporter activity K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005349 392.0
YHH3_k127_1429353_2 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000006473 266.0
YHH3_k127_1429353_3 metal-dependent phosphohydrolase HD region K07814 - - 0.0000000000000007555 79.0
YHH3_k127_1474990_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000504 582.0
YHH3_k127_1474990_1 Electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006424 470.0
YHH3_k127_1474990_10 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000006976 147.0
YHH3_k127_1474990_11 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000000283 118.0
YHH3_k127_1474990_12 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000009513 113.0
YHH3_k127_1474990_13 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.0000000000001014 78.0
YHH3_k127_1474990_14 PFAM Tetratricopeptide repeat - - - 0.00000002396 67.0
YHH3_k127_1474990_15 Acyl transferase domain K00645 - 2.3.1.39 0.0002263 45.0
YHH3_k127_1474990_2 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007597 402.0
YHH3_k127_1474990_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 407.0
YHH3_k127_1474990_4 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621,K21576,K21577 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.21.4.2,1.21.4.3,1.21.4.4,2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 379.0
YHH3_k127_1474990_5 PFAM Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 372.0
YHH3_k127_1474990_6 electron transfer activity K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016020,GO:0016491,GO:0022900,GO:0030312,GO:0040007,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 337.0
YHH3_k127_1474990_7 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004056 314.0
YHH3_k127_1474990_8 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004691 301.0
YHH3_k127_1474990_9 isoleucine patch superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005084 276.0
YHH3_k127_149904_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 348.0
YHH3_k127_149904_1 CO dehydrogenase K07321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 308.0
YHH3_k127_149904_10 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000003504 85.0
YHH3_k127_149904_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 302.0
YHH3_k127_149904_3 PFAM GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000167 253.0
YHH3_k127_149904_4 CMP dCMP deaminase, zinc-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000004767 240.0
YHH3_k127_149904_5 Response regulator receiver domain K03413 - - 0.0000000000000000000000000000000000000000000000005954 177.0
YHH3_k127_149904_6 4Fe-4S dicluster domain K03390,K16887 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000002192 173.0
YHH3_k127_149904_7 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000000002597 165.0
YHH3_k127_149904_8 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000008977 143.0
YHH3_k127_149904_9 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00000000000000000000000000000000002089 141.0
YHH3_k127_1521887_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 302.0
YHH3_k127_1521887_1 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002093 255.0
YHH3_k127_1521887_2 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000007274 189.0
YHH3_k127_1543746_0 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000001177 209.0
YHH3_k127_1543746_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000057 150.0
YHH3_k127_1543746_2 PFAM Rubrerythrin - - - 0.0000000000000002526 86.0
YHH3_k127_1587038_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 477.0
YHH3_k127_1587038_1 twitching motility protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005423 459.0
YHH3_k127_1587038_2 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000000000000001012 197.0
YHH3_k127_1587038_3 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000425 172.0
YHH3_k127_1587038_4 cheY-homologous receiver domain - - - 0.000000000000000000019 100.0
YHH3_k127_1587038_5 - - - - 0.000007687 54.0
YHH3_k127_1592808_0 Part of a membrane complex involved in electron transport K03615 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007112 503.0
YHH3_k127_1592808_1 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006447 469.0
YHH3_k127_1592808_10 Peptidase m48 ste24p - - - 0.000000000000000000000000000000000000000000000000000000000000003311 227.0
YHH3_k127_1592808_11 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000001382 166.0
YHH3_k127_1592808_12 Part of a membrane complex involved in electron transport K03612 - - 0.000000000000000000000000001985 119.0
YHH3_k127_1592808_13 PFAM nitrogen-fixing NifU domain protein - - - 0.0000000000000000000000008001 111.0
YHH3_k127_1592808_14 Sh3 type 3 domain protein K02450,K12132 - 2.7.11.1 0.00000000000001428 81.0
YHH3_k127_1592808_15 - - - - 0.0000000004838 73.0
YHH3_k127_1592808_16 - - - - 0.0000000007601 66.0
YHH3_k127_1592808_17 cellulase activity - - - 0.000002597 61.0
YHH3_k127_1592808_2 Chase2 domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 443.0
YHH3_k127_1592808_3 Part of a membrane complex involved in electron transport K03614 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 353.0
YHH3_k127_1592808_4 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 339.0
YHH3_k127_1592808_5 Putative Fe-S cluster K03616 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004231 336.0
YHH3_k127_1592808_6 TIGRFAM MazG family protein K02428,K02499 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 289.0
YHH3_k127_1592808_7 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000334 245.0
YHH3_k127_1592808_8 Part of a membrane complex involved in electron transport K03617 - - 0.000000000000000000000000000000000000000000000000000000000000000000003288 239.0
YHH3_k127_1592808_9 Part of a membrane complex involved in electron transport K03613 - - 0.0000000000000000000000000000000000000000000000000000000000000000925 227.0
YHH3_k127_1592887_0 PFAM band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 410.0
YHH3_k127_1592887_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007406 405.0
YHH3_k127_1592887_2 PFAM ADP-ribosylation Crystallin J1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000463 366.0
YHH3_k127_1592887_3 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 328.0
YHH3_k127_159538_0 Belongs to the NAGSA dehydrogenase family. Type 1 subfamily K00145,K05829 GO:0003674,GO:0003824,GO:0003942,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004309 399.0
YHH3_k127_159538_1 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000007934 190.0
YHH3_k127_159538_2 Ribosomal protein S9/S16 K02996 - - 0.000000000000000000000000000000000000000000000006489 174.0
YHH3_k127_159538_3 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000007276 64.0
YHH3_k127_1636796_0 Protein of unknown function (DUF3641) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889 347.0
YHH3_k127_1636796_1 Protein of unknown function (DUF3047) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005239 256.0
YHH3_k127_164866_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 3.695e-234 735.0
YHH3_k127_164866_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.702e-204 644.0
YHH3_k127_164866_2 3-isopropylmalate dehydrogenase activity K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0040007,GO:0044424,GO:0044464,GO:0055114 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004252 544.0
YHH3_k127_164866_3 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004409 422.0
YHH3_k127_164866_4 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 361.0
YHH3_k127_164866_5 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000153 262.0
YHH3_k127_164866_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000003218 228.0
YHH3_k127_164866_7 phosphatidylethanolamine metabolic process K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000005443 221.0
YHH3_k127_1667659_0 COG0210 Superfamily I DNA and RNA helicases K16898 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000002391 205.0
YHH3_k127_1696848_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009143 277.0
YHH3_k127_1696848_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000709 273.0
YHH3_k127_1696848_2 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.00000000000000000000000000000003218 134.0
YHH3_k127_1696848_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000001883 74.0
YHH3_k127_1696848_4 PFAM Rhodanese domain protein - - - 0.000000859 55.0
YHH3_k127_1696848_5 cheY-homologous receiver domain - - - 0.0009772 47.0
YHH3_k127_1744963_0 DNA topoisomerase II activity K02469,K02621 GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006276,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008150,GO:0008152,GO:0009330,GO:0009987,GO:0016020,GO:0016043,GO:0019897,GO:0019898,GO:0022402,GO:0030541,GO:0032991,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0098813,GO:1901360,GO:1901363 5.99.1.3 3.193e-222 712.0
YHH3_k127_1744963_1 - - - - 0.000000000000000000000000000000000000004098 147.0
YHH3_k127_1744963_2 Phage derived protein Gp49-like (DUF891) - - - 0.000000000000000000000000000000000009421 141.0
YHH3_k127_1744963_3 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000000000000000000004129 128.0
YHH3_k127_1797939_0 AAA domain K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000649 538.0
YHH3_k127_1826658_0 Beta-Casp domain K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 398.0
YHH3_k127_1826658_1 Restriction endonuclease K07448 - - 0.0000005734 61.0
YHH3_k127_1826658_2 SMI1 / KNR4 family - - - 0.0006502 51.0
YHH3_k127_1858972_0 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 456.0
YHH3_k127_1858972_1 Outer membrane protein beta-barrel domain - - - 0.000000000000000000001363 100.0
YHH3_k127_188903_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007696 399.0
YHH3_k127_188903_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002002 281.0
YHH3_k127_188903_2 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004113 255.0
YHH3_k127_188903_3 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000000002867 76.0
YHH3_k127_1921573_0 NADH-quinone oxidoreductase chain L K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 621.0
YHH3_k127_1921573_1 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 582.0
YHH3_k127_1921573_10 Signal transduction histidine kinase, nitrogen specific, NtrB K07708,K10942 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000009047 270.0
YHH3_k127_1921573_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000009052 225.0
YHH3_k127_1921573_12 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000000005641 177.0
YHH3_k127_1921573_13 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000006481 186.0
YHH3_k127_1921573_14 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000006867 174.0
YHH3_k127_1921573_15 cyclic nucleotide binding K01420,K10716 - - 0.000000000000000000000000000000000000000000002832 171.0
YHH3_k127_1921573_16 methyltransferase - - - 0.000000000000000000000000000000000000000007821 161.0
YHH3_k127_1921573_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000004429 145.0
YHH3_k127_1921573_18 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000000000000000000001004 141.0
YHH3_k127_1921573_19 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000005722 130.0
YHH3_k127_1921573_2 Ammonium Transporter Family K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 549.0
YHH3_k127_1921573_20 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000002701 113.0
YHH3_k127_1921573_22 PFAM Cyclic nucleotide-binding - - - 0.0000000000000000001315 94.0
YHH3_k127_1921573_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 497.0
YHH3_k127_1921573_4 PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 500.0
YHH3_k127_1921573_5 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00336 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 469.0
YHH3_k127_1921573_6 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 440.0
YHH3_k127_1921573_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008863 438.0
YHH3_k127_1921573_8 Ammonium Transporter K03320 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 353.0
YHH3_k127_1921573_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 348.0
YHH3_k127_1946379_0 Glutamine synthetase, catalytic region K01915 - 6.3.1.2 0.0 1232.0
YHH3_k127_1946379_1 Amino acid permease - - - 4.925e-258 811.0
YHH3_k127_1946379_10 cheY-homologous receiver domain K03413 - - 0.00000000000000000000003391 103.0
YHH3_k127_1946379_11 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.0000000000000000003048 88.0
YHH3_k127_1946379_2 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 437.0
YHH3_k127_1946379_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007771 388.0
YHH3_k127_1946379_4 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 329.0
YHH3_k127_1946379_5 Adenylate kinase, active site lid K00939 GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 317.0
YHH3_k127_1946379_6 Transcriptional regulatory protein, C terminal K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 315.0
YHH3_k127_1946379_7 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007892 291.0
YHH3_k127_1946379_8 histidine kinase HAMP region domain protein - - - 0.00000000000000000000000000000000000000000000000001194 203.0
YHH3_k127_1946379_9 Imidazoleglycerol-phosphate dehydratase K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.0000000000000000000000000000000000000003948 150.0
YHH3_k127_195146_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 2.525e-321 1000.0
YHH3_k127_195146_1 Belongs to the glutamate synthase family K00265 - 1.4.1.13,1.4.1.14 6.229e-298 923.0
YHH3_k127_195146_10 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.0000000000001226 74.0
YHH3_k127_195146_13 Protein of unknown function (DUF1523) - - - 0.00007279 50.0
YHH3_k127_195146_2 PFAM ferredoxin-dependent glutamate synthase - - - 5.297e-286 883.0
YHH3_k127_195146_3 FMN binding - - - 3.479e-274 850.0
YHH3_k127_195146_4 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 577.0
YHH3_k127_195146_5 Elongation factor SelB winged helix 3 K03833 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 558.0
YHH3_k127_195146_6 glutamate synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 393.0
YHH3_k127_195146_7 Ribonuclease R winged-helix domain K09720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 379.0
YHH3_k127_195146_8 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000003362 237.0
YHH3_k127_195146_9 Domain of unknown function (DUF4154) - - - 0.00000000000000000000000001583 116.0
YHH3_k127_1955877_0 Uncharacterised protein family (UPF0182) K09118 - - 1.834e-315 985.0
YHH3_k127_1955877_1 PFAM sodium calcium exchanger membrane region K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 312.0
YHH3_k127_1955877_2 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000002241 128.0
YHH3_k127_2003946_0 Pyridoxal-phosphate dependent enzyme K06001 - 4.2.1.20 4.93e-217 681.0
YHH3_k127_2003946_1 PFAM HhH-GPD family protein K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001573 271.0
YHH3_k127_2003946_2 radical SAM K06871 - - 0.0000000000000000000000000000000000000000000000000002326 197.0
YHH3_k127_2003946_3 Cyclic nucleotide-monophosphate binding domain K10914 - - 0.0000000000000000000000000000000001001 139.0
YHH3_k127_2003946_4 Transcriptional - - - 0.000000000000000000000000000000003389 131.0
YHH3_k127_2137245_0 Cache domain - - - 5.821e-252 789.0
YHH3_k127_2137245_1 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005933 383.0
YHH3_k127_2137245_2 ABC1 family K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 314.0
YHH3_k127_2137245_3 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007861 292.0
YHH3_k127_2137245_4 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000009836 269.0
YHH3_k127_2137245_5 - - - - 0.00000000000000000000000000000000000000000004012 165.0
YHH3_k127_2137245_6 Histidine kinase K07641,K07642,K07711 - 2.7.13.3 0.0000000000000000000000000127 117.0
YHH3_k127_2137245_7 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000003357 99.0
YHH3_k127_2137245_8 PFAM PASTA domain - - - 0.000000000000000001146 97.0
YHH3_k127_2137245_9 Protein of unknown function DUF116 K09729 - - 0.00000000001654 64.0
YHH3_k127_2189763_0 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003283 266.0
YHH3_k127_2189763_1 phosphorelay signal transduction system - - - 0.0000000000797 71.0
YHH3_k127_2211433_0 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000005514 265.0
YHH3_k127_2211433_1 auxin-activated signaling pathway K07088 - - 0.0000000000000000000000000000000000000000000000426 177.0
YHH3_k127_2211433_2 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 - 3.1.3.18 0.000000000414 61.0
YHH3_k127_2224084_0 COG1194 A G-specific DNA glycosylase K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006088 301.0
YHH3_k127_2224084_1 radical SAM K06871 - - 0.0000000000000000000000000000000000000000000000002957 188.0
YHH3_k127_2224084_2 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 0.0000000000000000000000000000000000004408 141.0
YHH3_k127_2224084_3 Transcriptional - - - 0.0000000000000000000000000000000002954 134.0
YHH3_k127_2229543_0 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003695 338.0
YHH3_k127_2229543_1 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001143 288.0
YHH3_k127_2229543_2 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001141 273.0
YHH3_k127_2229543_3 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002635 251.0
YHH3_k127_2229543_4 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000001553 149.0
YHH3_k127_2229543_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000004172 149.0
YHH3_k127_2229543_6 dolichyl monophosphate biosynthetic process - - - 0.00000000000000003571 89.0
YHH3_k127_2229543_7 Carbon monoxide dehydrogenase subunit G (CoxG) - - - 0.0005638 48.0
YHH3_k127_2237815_0 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 462.0
YHH3_k127_2237815_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006198 326.0
YHH3_k127_2237815_2 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002625 305.0
YHH3_k127_2237815_3 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000003772 266.0
YHH3_k127_2237815_4 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000002097 226.0
YHH3_k127_2237815_5 Periplasmic binding protein - - - 0.000000000000000000000000000000000000000000000000000005719 209.0
YHH3_k127_2237815_6 - - - - 0.000000000000000004255 90.0
YHH3_k127_2237815_7 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000000000001681 83.0
YHH3_k127_2237815_8 - - - - 0.00000000006546 70.0
YHH3_k127_2237815_9 Peptidase family M50 - - - 0.000000002194 59.0
YHH3_k127_2259826_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 3.424e-290 904.0
YHH3_k127_2259826_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000572 554.0
YHH3_k127_2259826_10 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000001144 124.0
YHH3_k127_2259826_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002541 356.0
YHH3_k127_2259826_3 Serine acetyltransferase, N-terminal K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006884 280.0
YHH3_k127_2259826_4 ADP-ribosylation factor family K06883 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005303 265.0
YHH3_k127_2259826_5 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.0000000000000000000000000000000000000000000000000000000000000000001377 237.0
YHH3_k127_2259826_6 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000004985 224.0
YHH3_k127_2259826_7 - - - - 0.000000000000000000000000000000000000000000000000000000000003089 228.0
YHH3_k127_2259826_8 inositol monophosphate 1-phosphatase activity K01082,K01092 - 3.1.3.25,3.1.3.7 0.00000000000000000000000000000000000000000000000000000008243 206.0
YHH3_k127_2259826_9 RHS protein - - - 0.00000000000000000000000000000000005842 143.0
YHH3_k127_2322748_0 PFAM CheW domain protein K03408 - - 0.000000000000000000000000000000000000000000000000000000006013 208.0
YHH3_k127_2322748_1 TIGRFAM phosphate binding protein K02040 - - 0.00000000000000000000000000000000000003887 146.0
YHH3_k127_2322748_2 Diguanylate cyclase - - - 0.0000000000000000000000000000000001588 142.0
YHH3_k127_2322748_3 PFAM response regulator receiver - - - 0.000000000008429 70.0
YHH3_k127_2400614_0 PFAM MltA K08304 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008059 328.0
YHH3_k127_2400614_1 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000007625 229.0
YHH3_k127_2400614_2 - - - - 0.000001919 58.0
YHH3_k127_254735_0 PAS PAC sensor hybrid histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 501.0
YHH3_k127_254735_1 MraW methylase family K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003381 333.0
YHH3_k127_254735_2 Belongs to the MraZ family K03925 - - 0.0000000000000000000000000000000000002804 144.0
YHH3_k127_254735_3 HNH nucleases - - - 0.0000000000000000000000000000000000003962 141.0
YHH3_k127_254735_4 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000007246 142.0
YHH3_k127_254735_5 ribosomal large subunit export from nucleus - - - 0.0000000001803 62.0
YHH3_k127_254735_6 STAS domain K04749 - - 0.0000000003836 65.0
YHH3_k127_254735_7 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 0.00002085 49.0
YHH3_k127_254735_8 Essential cell division protein - - - 0.000182 49.0
YHH3_k127_2578545_0 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11779,K11784 - 1.21.98.1,2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000439 470.0
YHH3_k127_2578545_1 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008074 456.0
YHH3_k127_2578545_2 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 312.0
YHH3_k127_2578545_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008793 305.0
YHH3_k127_2578545_4 Amidohydrolase family K20810 - 3.5.4.40 0.00000000000000000000000000000000000000000000000000000216 207.0
YHH3_k127_2578545_5 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000008111 166.0
YHH3_k127_2578545_6 Prokaryotic N-terminal methylation motif K02650 - - 0.0000000000000000000001089 99.0
YHH3_k127_2578545_7 MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.000000000000000001253 90.0
YHH3_k127_2604380_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004346 572.0
YHH3_k127_2604380_1 anaerobic electron transport chain - GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016491,GO:0019645,GO:0022900,GO:0022904,GO:0044237,GO:0045333,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003881 560.0
YHH3_k127_2604380_2 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 469.0
YHH3_k127_2604380_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 434.0
YHH3_k127_2604380_4 Amino acid kinase family K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006507 380.0
YHH3_k127_2604380_5 8 heme-binding sites - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005652 333.0
YHH3_k127_2604380_6 Histidine kinase - - - 0.00000000000000000000000000004357 121.0
YHH3_k127_2604380_7 response regulator, receiver - - - 0.0000000000000001181 85.0
YHH3_k127_2613193_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000006871 99.0
YHH3_k127_2613193_1 PFAM Uncharacterised protein family (UPF0153) K06940 - - 0.000000000001155 79.0
YHH3_k127_2613193_2 PFAM Tetratricopeptide - - - 0.0005505 50.0
YHH3_k127_2627652_0 TIGRFAM amine acid ABC transporter, permease protein, 3-TM region, His Glu Gln Arg opine family K02029,K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006667 527.0
YHH3_k127_2627652_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 419.0
YHH3_k127_2627652_2 COG1126 ABC-type polar amino acid transport system, ATPase component K10010 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001005 265.0
YHH3_k127_2627652_3 cheY-homologous receiver domain - - - 0.0000000000000000000000236 109.0
YHH3_k127_2627652_4 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000002499 91.0
YHH3_k127_2627652_5 Regulator of chromosome condensation (RCC1) repeat - - - 0.00000000000000001407 83.0
YHH3_k127_2627652_6 helix_turn_helix, arabinose operon control protein K07720 - - 0.0000009344 54.0
YHH3_k127_2638417_0 GMC oxidoreductase K03333 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009405,GO:0016491,GO:0016614,GO:0016899,GO:0016995,GO:0044419,GO:0051704,GO:0055114 1.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003111 466.0
YHH3_k127_2638417_1 Uncharacterised conserved protein (DUF2156) K01163 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 319.0
YHH3_k127_2638417_2 - - - - 0.0000000000000000000000385 102.0
YHH3_k127_2733456_0 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008433 516.0
YHH3_k127_2733456_1 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000445 451.0
YHH3_k127_2733456_2 nitric oxide reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000005936 210.0
YHH3_k127_2733456_3 Transcriptional regulatory protein, C terminal - - - 0.00000000000000001381 88.0
YHH3_k127_2733456_4 cheY-homologous receiver domain - - - 0.000000001377 66.0
YHH3_k127_2796143_0 GTP-binding protein TypA K06207 - - 4.043e-265 830.0
YHH3_k127_2796143_1 Sugar (and other) transporter K03446 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 615.0
YHH3_k127_2796143_2 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005097 415.0
YHH3_k127_2796143_3 DoxX K15977 - - 0.00000000000000000000000000000000000000000000000002423 183.0
YHH3_k127_2796143_4 MarR family transcriptional K15973 - - 0.0000000000000000000000000000000000000000000000003791 179.0
YHH3_k127_2796143_5 DUF218 domain - GO:0000270,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0030203,GO:0031224,GO:0042546,GO:0043164,GO:0043170,GO:0044085,GO:0044425,GO:0044464,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901564 - 0.000000000000000000000000000144 124.0
YHH3_k127_2859152_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006074 455.0
YHH3_k127_2859152_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 459.0
YHH3_k127_2859152_2 PFAM Class II aldolase K01628 - 4.1.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 383.0
YHH3_k127_2859152_3 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.0000000000000000000000000000000000000006121 151.0
YHH3_k127_2859152_4 - - - - 0.000000000000000000002005 96.0
YHH3_k127_2859152_5 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000001481 74.0
YHH3_k127_2859152_6 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.000000000008665 76.0
YHH3_k127_2864517_0 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 294.0
YHH3_k127_2864517_1 Cation efflux family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003349 266.0
YHH3_k127_2864517_2 PFAM phosphate transporter K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001249 262.0
YHH3_k127_2864517_3 - - - - 0.00000000000000000000001755 104.0
YHH3_k127_2864517_4 response regulator, receiver - - - 0.000000000001553 77.0
YHH3_k127_2870421_0 metal-dependent phosphohydrolase HD region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 509.0
YHH3_k127_2870421_1 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006248 411.0
YHH3_k127_2870421_2 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000359 180.0
YHH3_k127_2870421_3 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000008141 134.0
YHH3_k127_2870421_4 SurA N-terminal domain K03771 - 5.2.1.8 0.00000000000000000000000000000001349 141.0
YHH3_k127_2870421_5 Smr domain - - - 0.00000000000000000000000000002986 125.0
YHH3_k127_2870421_6 Belongs to the 'phage' integrase family - - - 0.00000257 50.0
YHH3_k127_2885954_0 Argininosuccinate lyase C-terminal K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 560.0
YHH3_k127_2885954_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.0000000107 56.0
YHH3_k127_2964511_0 PFAM Radical SAM - - - 4.034e-206 653.0
YHH3_k127_2964511_1 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000003564 152.0
YHH3_k127_2964511_2 Cold shock K03704 - - 0.000000000000000000000005691 102.0
YHH3_k127_2966071_1 Tellurite resistance protein TehB - - - 0.0000000000000000000000000000000000000000000000000000000000008332 219.0
YHH3_k127_3050690_0 lyase activity - - - 0.000000000000000000000000000000000000000004991 167.0
YHH3_k127_3050690_1 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.0000000001189 67.0
YHH3_k127_3056861_0 Domain of unknown function (DUF4149) - - - 0.000000000000000000000000000000000325 137.0
YHH3_k127_3056861_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000003372 135.0
YHH3_k127_3056861_2 Cytokinin dehydrogenase 1, FAD and cytokinin binding - - - 0.000000000000002648 88.0
YHH3_k127_3072040_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000123 283.0
YHH3_k127_3072040_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K09765 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000003022 219.0
YHH3_k127_3072040_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000006019 144.0
YHH3_k127_3072040_3 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000002811 83.0
YHH3_k127_3072040_4 calcium ion homeostasis - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0008150,GO:0012505,GO:0016020,GO:0031984,GO:0042175,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0048878,GO:0050801,GO:0055065,GO:0055074,GO:0055080,GO:0065007,GO:0065008,GO:0072507,GO:0098771,GO:0098827 - 0.000001182 55.0
YHH3_k127_3087196_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1076.0
YHH3_k127_3087196_1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 5.222e-260 812.0
YHH3_k127_3087196_10 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000001061 241.0
YHH3_k127_3087196_11 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000002238 215.0
YHH3_k127_3087196_12 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000002191 201.0
YHH3_k127_3087196_13 Glycoprotease family K01409,K14742 GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.0000000000000000000000000000000000000000000000000001393 193.0
YHH3_k127_3087196_14 thiolester hydrolase activity K06889 - - 0.0000000000000000000000000000000000000000000002758 178.0
YHH3_k127_3087196_15 Protein of unknown function DUF86 - - - 0.000000000000000000000000000000000008709 139.0
YHH3_k127_3087196_16 WYL domain K13573 - - 0.0000000000000000000000000000001492 129.0
YHH3_k127_3087196_17 Acylphosphatase K01512 - 3.6.1.7 0.000000000000000000000000000000506 124.0
YHH3_k127_3087196_18 Nucleotidyltransferase domain K07075 - - 0.00000000000000000000000000002342 119.0
YHH3_k127_3087196_19 Acetyltransferase (GNAT) domain K03789 - 2.3.1.128 0.000000000000000000000000001785 122.0
YHH3_k127_3087196_2 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 GO:0003674,GO:0003824,GO:0003938,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.205 9.218e-224 703.0
YHH3_k127_3087196_20 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.00000000000000000000000002443 117.0
YHH3_k127_3087196_21 ACT domain K01653 - 2.2.1.6 0.000000000000000002946 84.0
YHH3_k127_3087196_22 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 - 0.000000000000000009312 90.0
YHH3_k127_3087196_23 Domain of unknown function (DUF4253) - - - 0.000000000000002371 86.0
YHH3_k127_3087196_24 Pkd domain containing protein K12567 - 2.7.11.1 0.00000000000004848 85.0
YHH3_k127_3087196_25 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000005744 72.0
YHH3_k127_3087196_27 ABC transporter K02003 - - 0.0000000006125 60.0
YHH3_k127_3087196_28 Nucleotidyltransferase domain - - - 0.00000005056 62.0
YHH3_k127_3087196_29 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000005522 59.0
YHH3_k127_3087196_3 Belongs to the IlvD Edd family K01687 - 4.2.1.9 2.608e-203 646.0
YHH3_k127_3087196_4 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007455 610.0
YHH3_k127_3087196_5 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003109 474.0
YHH3_k127_3087196_6 Sigma-54 interaction domain K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005345 428.0
YHH3_k127_3087196_7 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002773 427.0
YHH3_k127_3087196_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 354.0
YHH3_k127_3087196_9 Belongs to the pseudouridine synthase RsuA family K06178,K06181,K06182 - 5.4.99.20,5.4.99.21,5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000001743 284.0
YHH3_k127_3094821_0 Telomere recombination K04656 - - 5.122e-229 738.0
YHH3_k127_3094821_1 Na dependent nucleoside transporter K03317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004882 488.0
YHH3_k127_3094821_2 Hydrogenase formation hypA family K04654 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007973 435.0
YHH3_k127_3094821_3 TIGRFAM hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 383.0
YHH3_k127_3094821_4 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005803 295.0
YHH3_k127_3094821_5 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000005377 91.0
YHH3_k127_3094821_6 carbon dioxide binding K04653 - - 0.0000000000001082 78.0
YHH3_k127_3094821_7 - - - - 0.0000003795 54.0
YHH3_k127_3246569_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 520.0
YHH3_k127_3246569_1 peptidyl-lysine modification to peptidyl-hypusine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009024 383.0
YHH3_k127_3246569_2 PFAM Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 306.0
YHH3_k127_3246569_3 PFAM binding-protein-dependent transport systems inner membrane component K02034,K15582 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004723 264.0
YHH3_k127_3246569_4 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000003971 240.0
YHH3_k127_3246569_5 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000001089 232.0
YHH3_k127_3246569_6 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000001383 95.0
YHH3_k127_3369962_0 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 297.0
YHH3_k127_3369962_1 PFAM Rhodanese domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002827 283.0
YHH3_k127_3369962_2 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000003883 166.0
YHH3_k127_3483532_0 PFAM aminotransferase, class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 605.0
YHH3_k127_3483532_1 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000007352 171.0
YHH3_k127_3495106_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000423 331.0
YHH3_k127_3495106_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000001464 265.0
YHH3_k127_3495106_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000008937 230.0
YHH3_k127_3495106_3 Putative methyltransferase - - - 0.0000000000000000000000000002094 128.0
YHH3_k127_3495106_5 ABC transporter K02003 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00005736 46.0
YHH3_k127_3495185_0 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 2.731e-225 719.0
YHH3_k127_3495185_1 histidine kinase HAMP region domain protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004688 385.0
YHH3_k127_3495185_2 histidine kinase HAMP region domain protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 359.0
YHH3_k127_3495185_3 PFAM response regulator receiver K03413 - - 0.00000000000000000000000000000000000000001096 157.0
YHH3_k127_3495185_4 STAS domain - - - 0.00000000000000000001208 96.0
YHH3_k127_3497278_0 PFAM Transketolase K00615 - 2.2.1.1 4.595e-241 762.0
YHH3_k127_3497278_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 324.0
YHH3_k127_3497278_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0030964,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002862 275.0
YHH3_k127_3497278_3 Belongs to the complex I subunit 6 family K00339 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016021,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000000000000000000000000000002384 199.0
YHH3_k127_3497278_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000000000000000000003413 148.0
YHH3_k127_353427_0 PFAM peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 502.0
YHH3_k127_353427_1 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009016 401.0
YHH3_k127_353427_2 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 357.0
YHH3_k127_353427_3 PFAM Uncharacterised protein family (UPF0153) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004035 354.0
YHH3_k127_353427_4 Flavin reductase like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000517 235.0
YHH3_k127_353427_5 Cupin domain - - - 0.00000000000000000000000000000000000000000000000005181 188.0
YHH3_k127_353427_6 Plasmid maintenance system killer K07334 - - 0.000000000000000000000000000000000000000144 153.0
YHH3_k127_353427_7 addiction module antidote protein HigA K21498 - - 0.000000000000000000000000000000000001562 143.0
YHH3_k127_3640802_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 370.0
YHH3_k127_3640802_1 Transglycosylase SLT domain K06381,K08309 - - 0.00000000000000000000000000000000000000000000000000000000000001399 237.0
YHH3_k127_3640802_2 Cobalt uptake substrate-specific transmembrane region K02007 - - 0.000000000000000000000000000000000005969 146.0
YHH3_k127_3640802_3 PFAM membrane protein of K08972 - - 0.0000000000000000000002045 105.0
YHH3_k127_3640802_4 PFAM Cobalt transport protein K02008 - - 0.0000000000000000005825 93.0
YHH3_k127_3659704_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 - 1.2.7.11,1.2.7.3 6.013e-234 736.0
YHH3_k127_3659704_1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002593 445.0
YHH3_k127_3659704_2 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 353.0
YHH3_k127_3659704_3 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000000000000000000000000000000000000006337 192.0
YHH3_k127_3659704_4 PFAM Dinitrogenase iron-molybdenum cofactor biosynthesis protein - - - 0.0000000000000000000000000000000000000000001588 162.0
YHH3_k127_3659704_5 LysE type translocator - - - 0.000000000000000000000000002462 113.0
YHH3_k127_3659704_6 part of a sulfur-relay system K11179 - - 0.00000000000000000000002066 105.0
YHH3_k127_3659704_7 Mediates influx of magnesium ions K03284 - - 0.00000000000003711 76.0
YHH3_k127_3659704_8 radical SAM domain protein - - - 0.000005446 59.0
YHH3_k127_3676891_0 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000003752 193.0
YHH3_k127_3676891_1 3-demethylubiquinone-9 3-O-methyltransferase activity K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000001537 114.0
YHH3_k127_3676891_2 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000005942 98.0
YHH3_k127_3676891_3 transferase activity, transferring glycosyl groups - - - 0.00000000000000000156 99.0
YHH3_k127_3693679_0 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 463.0
YHH3_k127_3693679_1 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 464.0
YHH3_k127_3693679_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02472 - 1.1.1.336 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 460.0
YHH3_k127_3693679_3 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 316.0
YHH3_k127_3693679_4 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.0000000000000000000000000000001481 125.0
YHH3_k127_3693679_5 methyltransferase - - - 0.0000258 54.0
YHH3_k127_3703462_0 DEAD DEAH box helicase K03654 - 3.6.4.12 1.042e-210 665.0
YHH3_k127_3710161_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 1.549e-204 651.0
YHH3_k127_3710161_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006362 299.0
YHH3_k127_3710161_10 isopentenyl-diphosphate delta-isomerase activity - - - 0.000000000000000000000000000000003391 137.0
YHH3_k127_3710161_11 bacterial (prokaryotic) histone like domain K05788 - - 0.00000000000000000000000000009594 118.0
YHH3_k127_3710161_12 metalloendopeptidase activity K03799 - - 0.0000000000000000000000001608 118.0
YHH3_k127_3710161_13 PBS lyase HEAT-like repeat - - - 0.000001247 61.0
YHH3_k127_3710161_14 Cytochrome b/b6/petB K00412,K03888 - - 0.00002409 48.0
YHH3_k127_3710161_2 Cytochrome c3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 308.0
YHH3_k127_3710161_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006415 306.0
YHH3_k127_3710161_4 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008783 276.0
YHH3_k127_3710161_5 cytidylate kinase activity K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000000000001046 237.0
YHH3_k127_3710161_6 denitrification pathway - - - 0.0000000000000000000000000000000000000000000000000000000000000001237 235.0
YHH3_k127_3710161_7 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000001285 230.0
YHH3_k127_3710161_8 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000002274 158.0
YHH3_k127_3710161_9 Rieske [2Fe-2S] domain K02636,K03886 - 1.10.9.1 0.00000000000000000000000000000000000000005488 157.0
YHH3_k127_3755166_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0008144,GO:0008150,GO:0009266,GO:0009314,GO:0009405,GO:0009408,GO:0009628,GO:0009966,GO:0009967,GO:0009986,GO:0009987,GO:0010646,GO:0010647,GO:0016032,GO:0016462,GO:0016465,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018995,GO:0019058,GO:0019068,GO:0020003,GO:0022610,GO:0023051,GO:0023056,GO:0030430,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033643,GO:0033644,GO:0033646,GO:0033647,GO:0033648,GO:0033655,GO:0035639,GO:0035821,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0043900,GO:0043903,GO:0044174,GO:0044175,GO:0044183,GO:0044215,GO:0044216,GO:0044217,GO:0044218,GO:0044279,GO:0044403,GO:0044406,GO:0044419,GO:0044421,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0044650,GO:0044764,GO:0046812,GO:0046872,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051704,GO:0051817,GO:0052047,GO:0052212,GO:0061077,GO:0065007,GO:0065010,GO:0097159,GO:0097367,GO:0101031,GO:1901222,GO:1901224,GO:1901265,GO:1901363,GO:1902531,GO:1902533,GO:1990220,GO:2000535 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007383 591.0
YHH3_k127_3755166_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 421.0
YHH3_k127_3755166_2 Peptidase family M23 K21471 GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000003159 246.0
YHH3_k127_3755166_3 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000000000000000000000000001879 193.0
YHH3_k127_3755166_4 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.000000000000000000000000000000000006912 138.0
YHH3_k127_3755166_5 cell division ATP-binding protein FtsE K09812 - - 0.0000000000000001959 81.0
YHH3_k127_3762272_0 Putative ATP-binding cassette K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000398 428.0
YHH3_k127_3762272_1 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 301.0
YHH3_k127_3790324_0 Tim44 K02117,K08678,K11646,K15539,K17835,K21636 - 1.1.98.6,1.4.1.24,3.6.3.14,3.6.3.15,4.1.1.35,4.1.99.20 8.239e-216 697.0
YHH3_k127_3793399_0 PFAM Carbamoyltransferase K00612 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 511.0
YHH3_k127_3793399_1 Glycosyltransferase, group 1 family protein - - - 0.000005576 58.0
YHH3_k127_3793399_2 ATPase of the PP-loop superfamily implicated in cell cycle control - - - 0.00001036 48.0
YHH3_k127_3810482_0 Phospholipase K01058 - 3.1.1.32,3.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006004 312.0
YHH3_k127_3810482_1 Fatty acid cis/trans isomerase (CTI) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004371 243.0
YHH3_k127_3810482_2 - - - - 0.0000000000000000000000002291 113.0
YHH3_k127_3810482_3 - - - - 0.000000000000000007038 93.0
YHH3_k127_3813753_0 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 511.0
YHH3_k127_3813753_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000003735 218.0
YHH3_k127_3842970_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 395.0
YHH3_k127_3842970_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.0000000000000000000000000004197 117.0
YHH3_k127_3842970_2 DNA ligase K01971 - 6.5.1.1 0.00000000009536 62.0
YHH3_k127_3851494_0 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 549.0
YHH3_k127_3851494_1 Ion transport 2 domain protein K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004885 481.0
YHH3_k127_3851494_2 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009454 463.0
YHH3_k127_3851494_3 Ecdysteroid kinase K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 475.0
YHH3_k127_3851494_4 Oxidoreductase FAD-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 401.0
YHH3_k127_3851494_5 NADH ubiquinone oxidoreductase 20 kDa subunit K14128 - 1.8.98.5 0.00000000000000000000000000000000000000000000000000000000000000000000006766 245.0
YHH3_k127_3851494_6 Glutamine amidotransferase class-I - - - 0.000000000000000000000000000000000000000000000000000000000000000001243 233.0
YHH3_k127_3851494_7 Bacterial Ig-like domain 2 - - - 0.0000000000000000001106 98.0
YHH3_k127_3913362_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 325.0
YHH3_k127_3913362_1 Sporulation and spore germination - - - 0.000000000001644 73.0
YHH3_k127_4012650_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005674 603.0
YHH3_k127_4012650_1 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 527.0
YHH3_k127_4012650_2 Outer membrane usher protein K07347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006005 486.0
YHH3_k127_4012650_3 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 380.0
YHH3_k127_4012650_4 beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 357.0
YHH3_k127_4012650_5 Glycosyltransferase family 28 N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006145 303.0
YHH3_k127_4012650_6 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001271 258.0
YHH3_k127_4012650_7 pilus organization K07346 - - 0.0000000000000000000000000000000000000000000000000004186 194.0
YHH3_k127_4012650_8 Bacterial regulatory protein, Fis family K02667 - - 0.000000000000001606 83.0
YHH3_k127_4012650_9 curli production assembly transport component CsgG - - - 0.0000179 53.0
YHH3_k127_4196653_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 436.0
YHH3_k127_4196653_1 Lytic transglycolase K03642 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004153 278.0
YHH3_k127_4196653_2 cytochrome c - - - 0.0000000000000000009461 89.0
YHH3_k127_4297391_0 Glycosyl hydrolase family 57 - - - 2.94e-208 670.0
YHH3_k127_4297391_1 nucleotidyltransferase activity K07075 - - 0.00000000000000000000000000000000000000000000007933 174.0
YHH3_k127_4297391_2 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000005011 166.0
YHH3_k127_4297391_3 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.00000000000000000001176 94.0
YHH3_k127_4297391_4 HEPN domain - - - 0.00000000000000007083 87.0
YHH3_k127_4297391_5 cell cycle K05589,K12065,K13052 - - 0.0000004447 59.0
YHH3_k127_4353568_0 PFAM Transketolase, C-terminal domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 399.0
YHH3_k127_4353568_1 Dehydrogenase E1 component K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 363.0
YHH3_k127_4353568_2 PFAM ABC transporter K09812 - - 0.000000000000000000000000000000000000001609 153.0
YHH3_k127_4353568_3 - - - - 0.000000000000000000000000006454 117.0
YHH3_k127_4379161_0 Sulfate permease family K01673,K03321 - 4.2.1.1 7.097e-219 692.0
YHH3_k127_4379161_1 response to heat K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 322.0
YHH3_k127_4379161_2 - - - - 0.000000000000000000000000000000000000000000002097 168.0
YHH3_k127_4379161_3 NlpC p60 family K13694,K13695 - 3.4.17.13 0.0001663 53.0
YHH3_k127_4408751_0 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000002905 201.0
YHH3_k127_4408751_1 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000003713 157.0
YHH3_k127_4408751_2 Uncharacterised protein family UPF0102 K07460 - - 0.00000000000000000000000001709 113.0
YHH3_k127_4408751_3 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000001518 105.0
YHH3_k127_4412970_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 1.81e-236 749.0
YHH3_k127_4412970_1 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 530.0
YHH3_k127_4412970_2 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 319.0
YHH3_k127_4412970_3 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 301.0
YHH3_k127_4412970_4 Haemolytic - - - 0.000000000000000000000000000000001341 136.0
YHH3_k127_4412970_5 mRNA binding - - - 0.0000000000000000000000008831 106.0
YHH3_k127_4412970_6 PFAM Uncharacterised protein family UPF0150 - - - 0.00000000000000000001018 96.0
YHH3_k127_4430445_0 Belongs to the PstS family K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 471.0
YHH3_k127_4430445_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001232 253.0
YHH3_k127_4430445_2 PFAM porin Gram-negative type - - - 0.0000000000005183 75.0
YHH3_k127_4452822_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 3.88e-258 808.0
YHH3_k127_4452822_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 331.0
YHH3_k127_4452822_2 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004974 292.0
YHH3_k127_4452822_3 PFAM AMP-dependent synthetase and ligase K01908 - 6.2.1.17 0.00000000000000000000000000000000000003251 144.0
YHH3_k127_4452822_4 Protein of unknown function (DUF2845) - - - 0.00000000000000000000000000000000002615 143.0
YHH3_k127_4452822_5 Fe-S cluster domain protein - - - 0.0000000000000000000000000000002289 133.0
YHH3_k127_4545846_0 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989,K02428 - 2.7.7.56,3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005827 304.0
YHH3_k127_4545846_1 Membrane protein, UPF0016 and UPF0016 domain-containing - - - 0.00000000000000000000000000581 117.0
YHH3_k127_4560379_0 Protein of unknown function (DUF1722) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 419.0
YHH3_k127_4560379_1 PFAM NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008781 410.0
YHH3_k127_4560379_2 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004173 322.0
YHH3_k127_4560379_3 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000003126 268.0
YHH3_k127_4560379_4 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.000000000000000000000000000000000000000000000000000000000000000004079 235.0
YHH3_k127_4560379_5 Domain of unknown function (DUF4337) - - - 0.00000000000000000000000000000000000000000007068 163.0
YHH3_k127_4560379_6 Predicted membrane protein (DUF2177) - - - 0.0000000000000000000000000000000000000009212 156.0
YHH3_k127_4560379_7 Domain of unknown function (DUF4337) - - - 0.000000000000000000000000000000418 123.0
YHH3_k127_4560379_8 Pfam:Pyridox_oxidase - - - 0.00000000000000000000000000003689 121.0
YHH3_k127_4560379_9 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000002997 101.0
YHH3_k127_4578101_0 protein histidine kinase activity K07636,K07652 - 2.7.13.3 0.00000000000000000000000002911 108.0
YHH3_k127_4578101_1 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000004201 115.0
YHH3_k127_4578101_2 protein histidine kinase activity K07636,K07652 - 2.7.13.3 0.0000000002337 62.0
YHH3_k127_4578101_3 positive regulation of growth - GO:0008150,GO:0040008,GO:0045927,GO:0048518,GO:0050789,GO:0065007 - 0.00000002883 59.0
YHH3_k127_4578101_4 ABC transporter K01996 - - 0.00000004946 55.0
YHH3_k127_4623031_0 beta-glucosidase activity K05350 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 323.0
YHH3_k127_4623031_1 Transporter associated domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002371 264.0
YHH3_k127_4623031_2 PFAM response regulator receiver K07657,K07659,K07664,K11329 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001661 250.0
YHH3_k127_4623031_3 - - - - 0.000000000000000000000000001402 119.0
YHH3_k127_4623031_4 transposition, DNA-mediated K20971 - - 0.00000000000000005165 84.0
YHH3_k127_4623031_5 mercury ion transmembrane transporter activity K01533,K07213 - 3.6.3.4 0.00000000000002654 79.0
YHH3_k127_4641183_0 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007808 499.0
YHH3_k127_4641183_1 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000006004 254.0
YHH3_k127_4641183_2 Signal transduction histidine kinase, nitrogen specific, NtrB K07708 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000002127 233.0
YHH3_k127_4641183_3 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000003086 221.0
YHH3_k127_4641183_4 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000008801 60.0
YHH3_k127_464857_0 TIGRFAM acetylornithine and succinylornithine K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 503.0
YHH3_k127_464857_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 403.0
YHH3_k127_464857_2 Family 5 K02035,K15580 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 373.0
YHH3_k127_464857_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 292.0
YHH3_k127_464857_4 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000000000000004325 183.0
YHH3_k127_464857_5 Peptidase C26 K07010 - - 0.000000000000000000000000000000000000000000000235 176.0
YHH3_k127_464857_7 small metal-binding protein - - - 0.000001604 55.0
YHH3_k127_464857_8 chemotaxis signal transduction protein K02659 - - 0.000376 53.0
YHH3_k127_4673018_0 Evidence 2b Function of strongly homologous gene - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006866 541.0
YHH3_k127_4673018_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 332.0
YHH3_k127_4673018_2 Beta-lactamase K17836 - 3.5.2.6 0.00000000000000000000000000000000000000009599 164.0
YHH3_k127_4673018_3 Type II secretion system protein E K02243,K02652 - - 0.0000000000000000000000000003122 123.0
YHH3_k127_4673018_4 COG NOG19146 non supervised orthologous group - - - 0.000001773 51.0
YHH3_k127_4673018_5 Protein of unknown function (DUF1573) - - - 0.000006504 51.0
YHH3_k127_4682002_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 410.0
YHH3_k127_4682002_1 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000008171 179.0
YHH3_k127_4682002_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.0000000000000000000000000000000000000005001 155.0
YHH3_k127_4682002_3 Could be involved in septation K06412 - - 0.000000000000000000000000000000001089 132.0
YHH3_k127_4727372_0 4 iron, 4 sulfur cluster binding K07139 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464,GO:0048037,GO:0051536,GO:0051539,GO:0051540 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 394.0
YHH3_k127_4727372_1 Lytic transglycosylase, SLT, LysM and LysM domain-containing K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007395 347.0
YHH3_k127_4727372_2 DNA polymerase alpha chain like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003819 272.0
YHH3_k127_4727372_3 Fibronectin-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000001301 222.0
YHH3_k127_4727372_4 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000003774 195.0
YHH3_k127_4727372_5 - - - - 0.000000000000000000000004482 101.0
YHH3_k127_4727372_6 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000005384 92.0
YHH3_k127_4727372_7 cell envelope organization K05807,K08309 - - 0.00000000000005526 81.0
YHH3_k127_4727372_8 Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000000000002703 78.0
YHH3_k127_4740769_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 2.572e-306 970.0
YHH3_k127_4740769_1 Putative RNA methylase family UPF0020 K07444,K12297 - 2.1.1.173,2.1.1.264 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003435 468.0
YHH3_k127_4740769_2 Pyridoxal-phosphate dependent enzyme K01738,K01883,K12339 - 2.5.1.47,6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 395.0
YHH3_k127_4740769_3 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006252 286.0
YHH3_k127_4740769_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K13888 - - 0.0000000000000000000000000000000000000000000000000000000008086 215.0
YHH3_k127_4740769_5 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000001107 164.0
YHH3_k127_4740769_6 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00000000000000000004418 95.0
YHH3_k127_4740769_7 Fe-S-cluster oxidoreductase K06940 - - 0.00000000000000000008307 89.0
YHH3_k127_4740769_8 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000004969 83.0
YHH3_k127_4740769_9 Protein of unknown function (DUF2892) - - - 0.0000000000003817 71.0
YHH3_k127_4761688_0 metal-dependent phosphohydrolase, HD sub domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004201 421.0
YHH3_k127_4761688_1 Tfp pilus assembly protein FimV - - - 0.000000000000000000000000000000000000001361 171.0
YHH3_k127_4761688_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000003628 139.0
YHH3_k127_478253_0 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004316 289.0
YHH3_k127_478253_1 cog0421, spermidine synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003987 274.0
YHH3_k127_478253_2 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000000000000414 183.0
YHH3_k127_478253_3 helicase K03722 - 3.6.4.12 0.0000000000000000000000000000000000000000000000005215 178.0
YHH3_k127_478253_5 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate - - - 0.0000000000000000000000000000000000000000003238 162.0
YHH3_k127_478253_6 response regulator - - - 0.000001808 58.0
YHH3_k127_4788622_0 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000002749 136.0
YHH3_k127_4788622_1 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000002832 120.0
YHH3_k127_4788622_2 Protein of unknown function K09800 - - 0.000000003588 69.0
YHH3_k127_4788622_3 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000006584 59.0
YHH3_k127_4791137_0 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000002269 140.0
YHH3_k127_4791137_1 RNA recognition motif - - - 0.00000000000000000000000001044 113.0
YHH3_k127_4791137_2 TfoX N-terminal domain - - - 0.000000000000000000001219 100.0
YHH3_k127_4791137_3 - - - - 0.0000000000000000005795 92.0
YHH3_k127_4791137_4 structural constituent of ribosome K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000003981 65.0
YHH3_k127_4791137_5 PFAM Positive regulator of sigma(E) RseC MucC K03803 - - 0.000003198 55.0
YHH3_k127_4791137_6 SRPBCC domain-containing protein - - - 0.00001771 48.0
YHH3_k127_4808395_0 histidine kinase A domain protein domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008565 488.0
YHH3_k127_4808395_1 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008478 366.0
YHH3_k127_4808395_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.0000000000000000000000000000000000008119 143.0
YHH3_k127_4808395_3 cyclic nucleotide binding K10914 - - 0.000000000000000000000000000000000257 135.0
YHH3_k127_4808395_4 peptidyl-tyrosine sulfation - - - 0.0001866 53.0
YHH3_k127_4922832_0 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003673 462.0
YHH3_k127_4922832_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 316.0
YHH3_k127_4922832_2 two component, sigma54 specific, transcriptional regulator, Fis family K07713 - - 0.00000000000000000000000000000000000001049 150.0
YHH3_k127_4922832_4 ribosomal protein - - - 0.0000000000000000000000002686 109.0
YHH3_k127_4922832_5 integral membrane protein - - - 0.000000000000002454 83.0
YHH3_k127_4922832_6 Putative OmpA-OmpF-like porin family - - - 0.0001261 51.0
YHH3_k127_4992442_0 Transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 459.0
YHH3_k127_4992442_1 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000759 300.0
YHH3_k127_4992442_2 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000005541 190.0
YHH3_k127_4992442_3 Phage integrase, N-terminal SAM-like domain - - - 0.000000000000000000000000000000000000000000006392 167.0
YHH3_k127_4992442_4 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000000000000000000947 165.0
YHH3_k127_4992442_5 PhoQ Sensor - - - 0.000000000000000000000001573 111.0
YHH3_k127_4992442_6 2Fe-2S -binding domain - - - 0.00000000001227 70.0
YHH3_k127_4992442_7 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.00000002709 57.0
YHH3_k127_5030656_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008928 328.0
YHH3_k127_5030656_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004757 267.0
YHH3_k127_5030656_2 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000003873 188.0
YHH3_k127_5085789_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 4.187e-320 999.0
YHH3_k127_5085789_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 5.172e-301 943.0
YHH3_k127_5085789_10 PFAM IstB domain protein ATP-binding protein - - - 0.0002378 45.0
YHH3_k127_5085789_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 554.0
YHH3_k127_5085789_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 406.0
YHH3_k127_5085789_4 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008274 389.0
YHH3_k127_5085789_5 Uncharacterized protein conserved in bacteria (DUF2155) - - - 0.0000000000000000000000000000003137 130.0
YHH3_k127_5085789_6 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 GO:0002097,GO:0002100,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 3.5.4.33 0.00000000000000003969 86.0
YHH3_k127_5085789_7 TPR repeat - - - 0.000000000000001834 83.0
YHH3_k127_5085789_8 peptidyl-tyrosine sulfation - - - 0.000000000000443 79.0
YHH3_k127_5133578_0 Outer membrane lipoprotein - - - 0.000000000000000000000000323 115.0
YHH3_k127_5133578_1 YtkA-like - - - 0.0000000000000000000000004098 109.0
YHH3_k127_5180764_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 1.168e-194 619.0
YHH3_k127_5180764_1 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 524.0
YHH3_k127_5180764_10 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000002803 123.0
YHH3_k127_5180764_11 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000004479 113.0
YHH3_k127_5180764_12 Roadblock/LC7 domain - - - 0.00000000000001465 78.0
YHH3_k127_5180764_13 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.00000000000008635 71.0
YHH3_k127_5180764_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003252 418.0
YHH3_k127_5180764_3 PhoH-like protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 381.0
YHH3_k127_5180764_4 7TM-HD extracellular K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 395.0
YHH3_k127_5180764_5 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007004 340.0
YHH3_k127_5180764_6 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000000005377 205.0
YHH3_k127_5180764_7 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.00000000000000000000000000000000000000000000000000003486 194.0
YHH3_k127_5180764_8 Prokaryotic diacylglycerol kinase K00901 - 2.7.1.107 0.00000000000000000000000000000000000000000000000000005238 195.0
YHH3_k127_5180764_9 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000001705 126.0
YHH3_k127_5227176_0 TIGRFAM cytochrome C family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003646 316.0
YHH3_k127_5227176_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000001985 247.0
YHH3_k127_5227176_2 transferase activity, transferring glycosyl groups K20742 - 3.4.14.13 0.00000000000000000000000000000000000000000000000000000000000000001607 230.0
YHH3_k127_5227176_3 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000217 139.0
YHH3_k127_5227176_4 OsmC-like protein K07397 - - 0.0000000000000000000001998 104.0
YHH3_k127_5231143_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 537.0
YHH3_k127_5231143_1 Protein of unknown function DUF47 K02039,K07220 - - 0.0000000000000000000000000000000000000000000001424 178.0
YHH3_k127_5231143_2 Phosphate transporter family K03306 GO:0003674,GO:0005215,GO:0005315,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0015291,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661 - 0.0000000000000000000000000000000000001502 145.0
YHH3_k127_5237439_0 DNA photolyase K01669 - 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 613.0
YHH3_k127_5237439_1 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation K03800 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 6.3.1.20 0.00000000000000000000000000000000000000000000000000006411 196.0
YHH3_k127_5237439_2 Putative zinc- or iron-chelating domain K06940 - - 0.000002104 50.0
YHH3_k127_5302185_0 Fructose-1,6-bisphosphate aldolase, class II K01624 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 514.0
YHH3_k127_5302185_1 Protein involved in outer membrane biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 312.0
YHH3_k127_5302185_2 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.0000000000000000000000000000000000000000005319 163.0
YHH3_k127_5302185_3 Cold shock K03704 - - 0.0000000000000000000000003277 105.0
YHH3_k127_5302185_4 - - - - 0.000000000006779 67.0
YHH3_k127_5335975_0 O-methyltransferase activity - - - 5.572e-203 651.0
YHH3_k127_5335975_1 SelR domain K07305,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000002442 255.0
YHH3_k127_5335975_2 - - - - 0.00000000000000000000816 97.0
YHH3_k127_5409725_0 Permease YjgP YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000004153 240.0
YHH3_k127_5409725_1 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.000000000000000000000000000000000000000000000002326 180.0
YHH3_k127_5409725_2 Permease, YjgP YjgQ family K11720 - - 0.000000000000000007826 89.0
YHH3_k127_5409725_3 - - - - 0.00000000000000008408 89.0
YHH3_k127_5409725_4 - - - - 0.0000000000000004548 83.0
YHH3_k127_5410312_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 7.017e-226 714.0
YHH3_k127_5410312_1 General secretory system II, protein E domain protein K02454 - - 4.405e-218 696.0
YHH3_k127_5410312_2 PFAM nickel-dependent hydrogenase large subunit K00436,K14126 - 1.12.1.2,1.8.98.5 1.686e-199 629.0
YHH3_k127_5410312_3 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004233 408.0
YHH3_k127_5410312_4 Fe-S type, tartrate fumarate subfamily, alpha K01677 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 367.0
YHH3_k127_5410312_5 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 289.0
YHH3_k127_5410312_6 CBS domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003352 262.0
YHH3_k127_5410312_7 Hydro-lyase, Fe-S type, tartrate fumarate subfamily, beta subunit K01678 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000009045 250.0
YHH3_k127_5410312_8 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.0000000000000000000002973 97.0
YHH3_k127_5429649_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.998e-245 766.0
YHH3_k127_5429649_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.763e-234 734.0
YHH3_k127_5429649_10 ATP synthase B/B' CF(0) K02109 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000001582 78.0
YHH3_k127_5429649_11 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000004026 74.0
YHH3_k127_5429649_2 Metallo-beta-lactamase superfamily K22405 - 1.6.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006946 603.0
YHH3_k127_5429649_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 295.0
YHH3_k127_5429649_4 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001856 280.0
YHH3_k127_5429649_5 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.000000000000000000000000000000000000000000000000000000000002396 211.0
YHH3_k127_5429649_6 Belongs to the Fur family K09825 - - 0.000000000000000000000000000000000000001099 151.0
YHH3_k127_5429649_7 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000284 116.0
YHH3_k127_5429649_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000003381 115.0
YHH3_k127_5429649_9 PFAM Rubredoxin-type Fe(Cys)4 protein - - - 0.00000000000000004371 81.0
YHH3_k127_5549647_0 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 2.811e-206 661.0
YHH3_k127_5634633_0 phosphatase activity K05967 - - 0.00000000000000000000000000000000000000002326 161.0
YHH3_k127_5634633_1 endo-1,4-beta-xylanase activity - GO:0005575,GO:0005576 - 0.00000000000008567 83.0
YHH3_k127_5634633_2 Kelch motif - - - 0.0000001308 60.0
YHH3_k127_5634633_3 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0006973 45.0
YHH3_k127_563516_0 Domain of unknown function (DUF4105) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004812 528.0
YHH3_k127_563516_1 Curli production assembly/transport component CsgG - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005504 265.0
YHH3_k127_563516_2 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000001045 179.0
YHH3_k127_563516_3 TIGRFAM siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000000000000008906 189.0
YHH3_k127_563516_4 Tetratricopeptide repeat K05807 - - 0.00000000000000000000000000000000001484 145.0
YHH3_k127_563516_5 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000000000000000000000000000001226 125.0
YHH3_k127_563516_6 - - - - 0.00000000000000000000672 94.0
YHH3_k127_563516_7 Domain of unknown function (DUF4388) - - - 0.0000000000000000001972 104.0
YHH3_k127_563516_8 Chaperone protein DNAj K03686 GO:0000003,GO:0000740,GO:0000741,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006457,GO:0006458,GO:0006996,GO:0006997,GO:0007275,GO:0007349,GO:0008150,GO:0008219,GO:0009553,GO:0009558,GO:0009559,GO:0009561,GO:0009653,GO:0009856,GO:0009987,GO:0010197,GO:0010198,GO:0010623,GO:0012501,GO:0016043,GO:0022414,GO:0030154,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0044706,GO:0048229,GO:0048284,GO:0048468,GO:0048646,GO:0048856,GO:0048869,GO:0051084,GO:0051085,GO:0051704,GO:0061024,GO:0061025,GO:0061077,GO:0071840,GO:0090174 - 0.000000003495 70.0
YHH3_k127_5853748_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007501 391.0
YHH3_k127_5853748_1 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000001443 158.0
YHH3_k127_5853748_2 DEAD DEAH box helicase domain protein K03654 - 3.6.4.12 0.000000000000000000000000000001079 126.0
YHH3_k127_5855606_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 478.0
YHH3_k127_5855606_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005012 369.0
YHH3_k127_5855606_10 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000427 160.0
YHH3_k127_5855606_11 metalloendopeptidase activity K03799 - - 0.000000000000000000000000000000000006263 152.0
YHH3_k127_5855606_12 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000002172 94.0
YHH3_k127_5855606_13 - - - - 0.00000000000000000003912 96.0
YHH3_k127_5855606_15 - - - - 0.0006697 45.0
YHH3_k127_5855606_2 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 357.0
YHH3_k127_5855606_3 Poly A polymerase head domain K00970,K00974,K07276,K19545 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000002157 263.0
YHH3_k127_5855606_4 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000002237 205.0
YHH3_k127_5855606_5 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008495,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.000000000000000000000000000000000000000000000000000000006766 211.0
YHH3_k127_5855606_6 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000106 210.0
YHH3_k127_5855606_7 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.000000000000000000000000000000000000000000000000008869 189.0
YHH3_k127_5855606_8 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275,K02297 - 1.10.3.10,1.9.3.1 0.0000000000000000000000000000000000000000000000001982 181.0
YHH3_k127_5855606_9 Domain of unknown function (DUF4145) - - - 0.00000000000000000000000000000000000000000000001403 179.0
YHH3_k127_5879508_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 537.0
YHH3_k127_5879508_1 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 355.0
YHH3_k127_5879508_2 MFS/sugar transport protein - - - 0.00000000000000000000000000000000000000000000000000000009924 201.0
YHH3_k127_5879508_3 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000002097 201.0
YHH3_k127_5879508_4 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000002805 132.0
YHH3_k127_5879508_5 metaphase/anaphase transition of mitotic cell cycle K03350 GO:0000003,GO:0000070,GO:0000151,GO:0000152,GO:0000209,GO:0000278,GO:0000280,GO:0000375,GO:0000377,GO:0000398,GO:0000819,GO:0001775,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005680,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0006139,GO:0006396,GO:0006397,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0006810,GO:0006887,GO:0006996,GO:0007049,GO:0007050,GO:0007059,GO:0007088,GO:0007091,GO:0007275,GO:0007338,GO:0007343,GO:0007346,GO:0007389,GO:0008150,GO:0008152,GO:0008283,GO:0008356,GO:0008380,GO:0009056,GO:0009057,GO:0009504,GO:0009566,GO:0009653,GO:0009719,GO:0009725,GO:0009733,GO:0009790,GO:0009791,GO:0009793,GO:0009798,GO:0009888,GO:0009896,GO:0009933,GO:0009948,GO:0009949,GO:0009952,GO:0009987,GO:0010014,GO:0010015,GO:0010033,GO:0010071,GO:0010154,GO:0010467,GO:0010498,GO:0010564,GO:0010638,GO:0010965,GO:0015630,GO:0016043,GO:0016070,GO:0016071,GO:0016192,GO:0016567,GO:0016740,GO:0017156,GO:0019538,GO:0019787,GO:0019899,GO:0019902,GO:0019903,GO:0019941,GO:0019953,GO:0022402,GO:0022414,GO:0022622,GO:0030071,GO:0030154,GO:0030163,GO:0031145,GO:0031331,GO:0031461,GO:0031974,GO:0031981,GO:0032270,GO:0032436,GO:0032446,GO:0032501,GO:0032502,GO:0032940,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034399,GO:0034641,GO:0036211,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0043900,GO:0043901,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044784,GO:0045055,GO:0045732,GO:0045786,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045930,GO:0045931,GO:0046483,GO:0046903,GO:0048285,GO:0048316,GO:0048364,GO:0048507,GO:0048508,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048532,GO:0048608,GO:0048731,GO:0048829,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051247,GO:0051276,GO:0051301,GO:0051603,GO:0051704,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060467,GO:0060468,GO:0060471,GO:0061458,GO:0061630,GO:0061659,GO:0062033,GO:0065001,GO:0065007,GO:0070013,GO:0070647,GO:0070979,GO:0071704,GO:0071840,GO:0071849,GO:0071850,GO:0071851,GO:0080154,GO:0090068,GO:0090304,GO:0090421,GO:0097159,GO:0098813,GO:0099402,GO:0140014,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903047,GO:1903052,GO:1903364,GO:1905392,GO:1905818,GO:1905820,GO:1990234,GO:2000241,GO:2000242,GO:2001252 - 0.0000001711 64.0
YHH3_k127_5883629_0 Rubrerythrin - GO:0003674,GO:0005488,GO:0005506,GO:0006950,GO:0006979,GO:0008150,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0050896 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002977 281.0
YHH3_k127_5883629_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000008534 216.0
YHH3_k127_5883629_2 Phospholipase D. Active site motifs. - - - 0.00000000000000000000000000002371 123.0
YHH3_k127_5883629_3 Ogr/Delta-like zinc finger - - - 0.000000000000004719 79.0
YHH3_k127_5910340_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009318 448.0
YHH3_k127_5910340_1 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004009 251.0
YHH3_k127_5910340_2 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000004517 247.0
YHH3_k127_5910340_3 PBS lyase HEAT-like repeat - - - 0.0000000000000000005625 102.0
YHH3_k127_5910340_4 COG0330 Membrane protease subunits, stomatin prohibitin homologs - - - 0.000000000000002603 78.0
YHH3_k127_5910340_5 SPFH domain / Band 7 family - - - 0.00000000000003607 75.0
YHH3_k127_5910340_6 HEAT repeats - - - 0.00000004928 66.0
YHH3_k127_5925473_0 ABC-2 type transporter K09694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 318.0
YHH3_k127_5925473_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001131 271.0
YHH3_k127_5925473_2 Putative TM nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000003011 215.0
YHH3_k127_5925473_3 Permease family K06901 - - 0.00000000000000000000000000000000000000000001885 164.0
YHH3_k127_5925473_4 Protein of unknown function DUF86 - - - 0.00000000000000000000000000000000005807 136.0
YHH3_k127_5925473_5 Nucleotidyltransferase domain K07075 - - 0.0000000000000000002532 91.0
YHH3_k127_5925473_7 - K21495 - - 0.00001017 47.0
YHH3_k127_5964096_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 3.823e-237 740.0
YHH3_k127_5964096_1 Glutamine synthetase, catalytic region K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 301.0
YHH3_k127_5964096_2 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000000000000001744 196.0
YHH3_k127_5964096_3 Hemerythrin HHE cation binding domain K07216 - - 0.00000000000000000000000000000000000000000006528 165.0
YHH3_k127_5964096_4 Tetratricopeptide repeats - - - 0.000000000000000000000000000001521 140.0
YHH3_k127_6002890_0 Arginyl tRNA synthetase N terminal dom K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 607.0
YHH3_k127_6002890_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005229 512.0
YHH3_k127_6002890_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002766 503.0
YHH3_k127_6002890_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001114 278.0
YHH3_k127_6002890_4 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000004075 252.0
YHH3_k127_6002890_5 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000003908 199.0
YHH3_k127_6002890_6 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.0000000000000000000000000000000000000000000000915 181.0
YHH3_k127_6002890_7 Methyltransferase K08316 - 2.1.1.171 0.000000000000000000000000000000000000000006179 161.0
YHH3_k127_6002890_8 Preprotein translocase subunit K03210 - - 0.0000000000000000000000000003551 117.0
YHH3_k127_6004343_0 Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006049 607.0
YHH3_k127_6004343_1 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 586.0
YHH3_k127_6004343_10 NapC/NirT cytochrome c family, N-terminal region - - - 0.0000000000000000000000000000000003038 144.0
YHH3_k127_6004343_11 energy transducer activity K03832 - - 0.00000000000000000007419 104.0
YHH3_k127_6004343_12 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000004306 91.0
YHH3_k127_6004343_13 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117 - - 0.000000000000000004298 87.0
YHH3_k127_6004343_14 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.0000000000000871 75.0
YHH3_k127_6004343_15 Pfam Polyketide cyclase dehydrase and lipid transport - - - 0.0000003974 62.0
YHH3_k127_6004343_16 - - - - 0.0000005273 61.0
YHH3_k127_6004343_2 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008083 377.0
YHH3_k127_6004343_3 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 350.0
YHH3_k127_6004343_4 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002297 285.0
YHH3_k127_6004343_5 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002033 278.0
YHH3_k127_6004343_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0022804,GO:0022857,GO:0022884,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.000000000000000000000000000000000000000000000000000000000000000000000456 248.0
YHH3_k127_6004343_7 Menaquinol oxidoreductase complex Cbc4, cytochrome c subunit - - - 0.0000000000000000000000000000000000000000000000000000000003143 205.0
YHH3_k127_6004343_8 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000005407 186.0
YHH3_k127_6004343_9 molybdopterin-guanine dinucleotide biosynthesis protein K03753,K13818 - 2.7.7.77 0.00000000000000000000000000000000001096 141.0
YHH3_k127_6047195_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003484 487.0
YHH3_k127_6047195_1 GtrA-like protein K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 478.0
YHH3_k127_6047195_2 Pfam:DUF2029 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001546 267.0
YHH3_k127_6047195_3 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000236 119.0
YHH3_k127_610580_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 7.306e-233 734.0
YHH3_k127_610580_1 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003929 514.0
YHH3_k127_610580_2 - - - - 0.0000000000000003587 82.0
YHH3_k127_610580_3 PFAM UspA - - - 0.0000000000007804 73.0
YHH3_k127_6123665_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001139 278.0
YHH3_k127_6123665_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000005328 123.0
YHH3_k127_6123665_2 Sporulation related domain - - - 0.00000000009672 70.0
YHH3_k127_618842_0 Putative diguanylate phosphodiesterase - - - 9.294e-194 632.0
YHH3_k127_618842_1 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 314.0
YHH3_k127_618842_2 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007695 278.0
YHH3_k127_618842_3 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008493 273.0
YHH3_k127_618842_4 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001673 267.0
YHH3_k127_618842_5 PFAM Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000002295 230.0
YHH3_k127_618842_7 3-beta hydroxysteroid dehydrogenase isomerase K21271,K22320 - 1.1.1.394,1.1.1.412 0.0000000000000000000001273 109.0
YHH3_k127_618842_8 DNA-binding transcription factor activity K03655,K03892,K21903 - 3.6.4.12 0.00000000000000000000121 98.0
YHH3_k127_618842_9 - - - - 0.00000000000001066 76.0
YHH3_k127_6262350_0 Sulfatase K01130 - 3.1.6.1 0.0 1229.0
YHH3_k127_6262350_1 Domain of unknown function (DUF4143) K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004862 405.0
YHH3_k127_6262350_2 Glycosyl hydrolase family 63 C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000003159 212.0
YHH3_k127_6262350_3 - - - - 0.000000000000000102 81.0
YHH3_k127_6312465_0 Molecular chaperone. Has ATPase activity K04079 - - 9.998e-258 808.0
YHH3_k127_6312465_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 2.691e-257 804.0
YHH3_k127_6312465_2 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.000000000000000000000000000000000009051 138.0
YHH3_k127_6312465_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000001154 138.0
YHH3_k127_6312465_4 Heat shock 70 kDa protein K04043 - - 0.0006279 48.0
YHH3_k127_6371986_0 Phosphonate ABC transporter, periplasmic K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 347.0
YHH3_k127_6371986_1 Domain of unknown function (DUF4372) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 342.0
YHH3_k127_6371986_2 unusual protein kinase K03688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009488 263.0
YHH3_k127_6371986_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000101 162.0
YHH3_k127_6387139_0 type II and III secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006198 482.0
YHH3_k127_6387139_1 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006321 439.0
YHH3_k127_6387139_10 PFAM Fimbrial assembly family protein K02461,K02662,K02663,K12289 - - 0.00000000282 67.0
YHH3_k127_6387139_11 Pilus assembly protein, PilO K02664 - - 0.000000003794 65.0
YHH3_k127_6387139_13 - - - - 0.00004159 53.0
YHH3_k127_6387139_2 Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006394 309.0
YHH3_k127_6387139_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002899 263.0
YHH3_k127_6387139_4 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000001482 183.0
YHH3_k127_6387139_5 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000001571 172.0
YHH3_k127_6387139_6 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000000001264 139.0
YHH3_k127_6387139_7 type II secretion system protein G K02456 - - 0.00000000000000000000000000003942 124.0
YHH3_k127_6387139_8 Pilus assembly protein K02662 - - 0.0000000000000000002646 99.0
YHH3_k127_6387139_9 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0000000000000001753 83.0
YHH3_k127_6399943_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006152,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016053,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019439,GO:0019510,GO:0019752,GO:0030554,GO:0031667,GO:0033353,GO:0034641,GO:0034655,GO:0034656,GO:0036094,GO:0036293,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046700,GO:0048037,GO:0048511,GO:0048512,GO:0050662,GO:0050667,GO:0050896,GO:0051186,GO:0051187,GO:0051287,GO:0055086,GO:0070482,GO:0071268,GO:0071704,GO:0072521,GO:0072523,GO:0097159,GO:0097458,GO:0098604,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901657,GO:1901658 3.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008154 548.0
YHH3_k127_6399943_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005148 548.0
YHH3_k127_6399943_2 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003874 391.0
YHH3_k127_6399943_3 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008546 323.0
YHH3_k127_6399943_4 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003817 277.0
YHH3_k127_6399943_5 TonB-dependent receptor plug K02014 - - 0.0000000000000000000000000000000000000000000000000000003574 216.0
YHH3_k127_6399943_6 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000002702 198.0
YHH3_k127_6399943_7 ABC transporter K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000155 180.0
YHH3_k127_6399943_8 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.000000000000001244 80.0
YHH3_k127_6399943_9 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00005115 53.0
YHH3_k127_6412871_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601,K03797 - 3.1.11.6,3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008 400.0
YHH3_k127_6412871_1 YmdB-like protein K09769 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000714 349.0
YHH3_k127_6412871_2 Endoribonuclease that initiates mRNA decay K18682 - - 0.000000000000000000000000000000000000217 142.0
YHH3_k127_6476581_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 7.356e-252 791.0
YHH3_k127_6476581_1 Belongs to the GPI family K01810 - 5.3.1.9 3.804e-215 680.0
YHH3_k127_6476581_10 GIY-YIG catalytic domain protein K07461 - - 0.000000000000000000001608 104.0
YHH3_k127_6476581_11 Belongs to the ParB family K03497 - - 0.00000000000000000002101 93.0
YHH3_k127_6476581_12 S4 domain K14761 - - 0.00000000000000006875 82.0
YHH3_k127_6476581_13 Sulfur reduction protein DsrE - - - 0.0000001731 55.0
YHH3_k127_6476581_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 445.0
YHH3_k127_6476581_3 Cellulose biosynthesis protein BcsQ K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 329.0
YHH3_k127_6476581_4 Aminotransferase, class V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 330.0
YHH3_k127_6476581_5 HD domain K07023 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008827 283.0
YHH3_k127_6476581_6 Adenylate kinase - - - 0.0000000000000000000000000000000000000000214 162.0
YHH3_k127_6476581_7 mRNA cleavage and polyadenylation factor CLP1 P-loop K06947 - - 0.000000000000000000000000000000000000002077 160.0
YHH3_k127_6476581_8 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.000000000000000000000000000000000004879 147.0
YHH3_k127_6476581_9 Belongs to the Nudix hydrolase family - - - 0.0000000000000000000000000006133 125.0
YHH3_k127_6558397_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 539.0
YHH3_k127_6558397_1 TIGRFAM Glyceraldehyde-3-phosphate dehydrogenase, type I K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007624 430.0
YHH3_k127_6558397_2 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005872 411.0
YHH3_k127_6558397_3 TIGRFAM riboflavin biosynthesis protein RibF K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003572 289.0
YHH3_k127_6558397_4 CbiX - - - 0.00000000000000000000001347 104.0
YHH3_k127_6558397_5 Domain of unknown function (DUF1844) - - - 0.0000000000000000002434 93.0
YHH3_k127_6558397_6 - - - - 0.0000000000003496 72.0
YHH3_k127_6566175_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005081 329.0
YHH3_k127_6566175_1 CO dehydrogenase/acetyl-CoA synthase delta subunit K00194 - 2.1.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000003413 248.0
YHH3_k127_6566175_2 thymidylate synthase (FAD) activity K03465 - 2.1.1.148 0.000000000000000000000000000000000000000000000000000000000000000000005499 240.0
YHH3_k127_6566175_3 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676,K06191 - - 0.00000000001131 66.0
YHH3_k127_6708496_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 348.0
YHH3_k127_6708496_1 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000003159 203.0
YHH3_k127_6708496_2 PFAM Patatin K07001 - - 0.000000000000000000000001019 110.0
YHH3_k127_6749722_0 PBP superfamily domain K05772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009302 370.0
YHH3_k127_6749722_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 356.0
YHH3_k127_6749722_2 Binding-protein-dependent transport system inner membrane component K05773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 295.0
YHH3_k127_6749722_3 cytochrome complex assembly - - - 0.00000000000000000000000000000000000000000000000000000000002242 215.0
YHH3_k127_6749722_4 regulation of translation K03530 - - 0.00000000000000000000000000000000000002777 145.0
YHH3_k127_6749722_5 Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.00000000000000000000000000000000003476 140.0
YHH3_k127_6749722_6 cytochrome c biogenesis protein - - - 0.0000000000000000000000000000000000831 142.0
YHH3_k127_6749722_7 PFAM Outer membrane lipoprotein Slp K07285 - - 0.000001136 55.0
YHH3_k127_6749722_8 - - - - 0.000004039 55.0
YHH3_k127_6761710_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0 1274.0
YHH3_k127_6761710_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 5.306e-264 831.0
YHH3_k127_6761710_10 Domain of unknown function (DUF4113) K03502 - - 0.000002423 54.0
YHH3_k127_6761710_11 Domain of unknown function (DUF4136) - - - 0.00001942 54.0
YHH3_k127_6761710_2 DHH family K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 373.0
YHH3_k127_6761710_3 proteolysis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 293.0
YHH3_k127_6761710_4 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001068 265.0
YHH3_k127_6761710_5 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000005824 161.0
YHH3_k127_6761710_6 Response regulator receiver domain - - - 0.000000000000000000000000000000000000003451 151.0
YHH3_k127_6761710_7 - - - - 0.00000000000000000000000000000009925 134.0
YHH3_k127_6761710_8 PFAM Smr protein MutS2 - - - 0.000000000000000000000000000004381 121.0
YHH3_k127_6761710_9 DHH family K07462 - - 0.0000000000000002153 81.0
YHH3_k127_6821531_0 Arsenite efflux pump ACR3 and related permeases K03325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 533.0
YHH3_k127_6821531_1 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007716 533.0
YHH3_k127_6821531_10 PFAM Thioredoxin K03671 - - 0.00000000000000000003109 95.0
YHH3_k127_6821531_11 sequence-specific DNA binding - - - 0.000000002106 63.0
YHH3_k127_6821531_2 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002827 474.0
YHH3_k127_6821531_3 PFAM ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006097 330.0
YHH3_k127_6821531_4 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000001706 228.0
YHH3_k127_6821531_5 phosphoprotein phosphatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000006156 226.0
YHH3_k127_6821531_6 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.00000000000000000000000000000000000000001381 156.0
YHH3_k127_6821531_7 3'-5' exonuclease - - - 0.000000000000000000000000000000002128 134.0
YHH3_k127_6821531_8 Thioredoxin domain - - - 0.0000000000000000000002879 98.0
YHH3_k127_6821531_9 Toxin-antitoxin system, toxin component, RelE family - - - 0.000000000000000000002763 97.0
YHH3_k127_6832470_0 Heat shock 70 kDa protein K04043 - - 2.624e-211 662.0
YHH3_k127_6832470_1 HrcA protein C terminal domain K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 309.0
YHH3_k127_6832470_2 PFAM Aminotransferase class I and II K10206 - 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000002081 261.0
YHH3_k127_6832470_3 Deoxynucleoside kinase K15518 - 2.7.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000005323 255.0
YHH3_k127_6832470_4 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000003627 168.0
YHH3_k127_6832470_5 GrpE K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.0000000000000000000000000000004292 135.0
YHH3_k127_6832470_6 Hsp20/alpha crystallin family - - - 0.000000000000000000000000001354 120.0
YHH3_k127_6991472_0 AIR synthase related protein, N-terminal domain K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006492 402.0
YHH3_k127_6991472_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001631 273.0
YHH3_k127_6991472_2 phosphatase activity K20881 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008477,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016798,GO:0016799,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050483,GO:0050484 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007812 270.0
YHH3_k127_6991472_3 MarC family integral membrane protein K05595 - - 0.00000000000000000000000000000000000000000000000007374 195.0
YHH3_k127_6991472_4 membrane K00389 - - 0.000000000000000000000000000000000000002144 151.0
YHH3_k127_7000512_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 580.0
YHH3_k127_7000512_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008117 438.0
YHH3_k127_7000512_10 TIGRFAM 4-oxalocrotonate tautomerase family enzyme K01821 - 5.3.2.6 0.000000000000000000000000006039 111.0
YHH3_k127_7000512_11 Omptin family - - - 0.000000000000000000000001529 115.0
YHH3_k127_7000512_13 SpoVT / AbrB like domain - - - 0.0000000000000000008298 87.0
YHH3_k127_7000512_14 Fimbrial assembly family protein K02461 - - 0.00000000000006467 77.0
YHH3_k127_7000512_15 Type II secretion system (T2SS), protein M K02462 - - 0.00000000000007489 79.0
YHH3_k127_7000512_16 - - - - 0.00001762 55.0
YHH3_k127_7000512_2 NeuB family K03856,K04516 - 2.5.1.54,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 432.0
YHH3_k127_7000512_3 3'(2'),5'-bisphosphate nucleotidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006473 334.0
YHH3_k127_7000512_4 UPF0126 domain - - - 0.000000000000000000000000000000000000000000000000000000000000002486 223.0
YHH3_k127_7000512_5 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000000000000000000000000000000000000000001205 183.0
YHH3_k127_7000512_6 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000003536 185.0
YHH3_k127_7000512_7 PIN domain - - - 0.00000000000000000000000000000000009573 136.0
YHH3_k127_7000512_8 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000001192 127.0
YHH3_k127_7000512_9 Protein of unknown function (DUF559) K07316 - 2.1.1.72 0.000000000000000000000000000002555 124.0
YHH3_k127_7065450_0 Ftsk_gamma K03466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 603.0
YHH3_k127_7065450_1 GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 511.0
YHH3_k127_7065450_10 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0030288,GO:0030313,GO:0031975,GO:0032940,GO:0033036,GO:0034613,GO:0042597,GO:0042886,GO:0042953,GO:0042954,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0051641,GO:0070727,GO:0071702,GO:0071705,GO:0072321,GO:0072322,GO:0072323,GO:0072657 - 0.000000000004518 76.0
YHH3_k127_7065450_11 Two component transcriptional regulator, LuxR family K02282 - - 0.00000000001395 68.0
YHH3_k127_7065450_2 Alpha/beta hydrolase family K07019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 404.0
YHH3_k127_7065450_3 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 325.0
YHH3_k127_7065450_4 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000007493 244.0
YHH3_k127_7065450_5 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000003046 241.0
YHH3_k127_7065450_6 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000000000000001323 231.0
YHH3_k127_7065450_7 regulator, PATAN and FRGAF domain-containing - - - 0.000000000000000000000000000000000000004016 153.0
YHH3_k127_7065450_8 Cysteine-rich small domain K07162 - - 0.0000000000000000000001753 99.0
YHH3_k127_7065450_9 PFAM response regulator receiver - - - 0.00000000000000005641 86.0
YHH3_k127_7080146_0 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 587.0
YHH3_k127_7080146_1 Lumazine binding domain K00793 - 2.5.1.9 0.000000000000000000000000000000000003223 139.0
YHH3_k127_7080146_2 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000713 53.0
YHH3_k127_7091822_0 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 308.0
YHH3_k127_7091822_1 imidazoleglycerol-phosphate dehydratase activity K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.00000000000000000000000000000000000000000000000007865 181.0
YHH3_k127_7091822_2 PFAM Uncharacterised protein family UPF0150 - - - 0.000000001443 67.0
YHH3_k127_7091822_3 helix_turn_helix, mercury resistance - - - 0.000004756 56.0
YHH3_k127_7091822_4 mRNA binding - - - 0.0002115 50.0
YHH3_k127_7095666_0 glycosyl transferase family 2 K00786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009947 264.0
YHH3_k127_7095666_1 PFAM Lytic transglycosylase catalytic K08309 - - 0.00000000000000000000000000000000000000000004609 170.0
YHH3_k127_7095666_2 Sigma-54 interaction domain K06714 - - 0.0000000000000000000000000000000000005835 142.0
YHH3_k127_7095666_3 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.00000000000000000000000000000004553 135.0
YHH3_k127_7095666_4 Uncharacterized conserved protein (DUF2304) - - - 0.00000000000000000002414 94.0
YHH3_k127_709735_0 Transport of potassium into the cell K03549 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 443.0
YHH3_k127_709735_1 TIGRFAM cytochrome C family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 401.0
YHH3_k127_709735_2 Alpha-tubulin suppressor and related RCC1 domain-containing proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008202 331.0
YHH3_k127_709735_3 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005939 261.0
YHH3_k127_709735_4 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000225 177.0
YHH3_k127_709735_5 denitrification pathway - - - 0.0000000000000000000000001051 124.0
YHH3_k127_709735_6 Protein of unknown function (DUF1566) - - - 0.000000000000000001797 100.0
YHH3_k127_7103445_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000359 289.0
YHH3_k127_7103445_1 inositol monophosphate 1-phosphatase activity K01082,K01092 - 3.1.3.25,3.1.3.7 0.000000000000000000000000000000000009163 142.0
YHH3_k127_714685_0 PFAM NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006644 260.0
YHH3_k127_714685_1 PFAM Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000677 237.0
YHH3_k127_714685_2 Belongs to the Fur family K03711,K09825 - - 0.000000000000000000000000000000000000000000000000001607 187.0
YHH3_k127_714685_3 - - - - 0.00000000000000000000000000000000000000133 158.0
YHH3_k127_714685_4 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000003103 119.0
YHH3_k127_714685_5 Thioredoxin K03672 - 1.8.1.8 0.0000000000000000002145 94.0
YHH3_k127_714685_6 COG0526 Thiol-disulfide isomerase and thioredoxins K03672 - 1.8.1.8 0.00000000000000007842 86.0
YHH3_k127_714685_7 Flavin reductase like domain - - - 0.00000000000001689 74.0
YHH3_k127_714685_9 Flavin reductase like domain - - - 0.00000006147 61.0
YHH3_k127_7312701_0 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009601 482.0
YHH3_k127_7312701_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006606 412.0
YHH3_k127_7312701_2 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 306.0
YHH3_k127_7312701_3 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000007517 244.0
YHH3_k127_7312701_4 PFAM amino acid-binding ACT domain protein - - - 0.000000000000000000000000000000000000000000000000008573 188.0
YHH3_k127_7328411_0 GTP-binding GTPase Middle Region K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 357.0
YHH3_k127_7328411_1 PFAM glycosyl transferase, family 9 K02841 - - 0.000000000000000000000000000000000000000000000000000000000111 211.0
YHH3_k127_7328411_2 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000001406 87.0
YHH3_k127_7328411_3 peptidase U32 K08303 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000003496 76.0
YHH3_k127_7330362_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 441.0
YHH3_k127_7330362_1 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 394.0
YHH3_k127_7330362_2 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 375.0
YHH3_k127_7330362_3 PFAM cytochrome c assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000613 218.0
YHH3_k127_7368514_0 Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 295.0
YHH3_k127_7368514_1 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.0000000000000000000000000000000000000000000000000000000004872 209.0
YHH3_k127_7368514_2 - - - - 0.000000000000000000000000000000001253 133.0
YHH3_k127_7368514_3 Transglycosylase SLT domain K08307 - - 0.00000000000261 68.0
YHH3_k127_7368514_4 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000001291 61.0
YHH3_k127_7368514_5 N-acetylmuramoyl-L-alanine amidase K01448 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.5.1.28 0.00000007761 64.0
YHH3_k127_7368514_6 Sporulation and spore germination - - - 0.000009169 55.0
YHH3_k127_7368514_7 Heavy-metal-associated domain K07213 - - 0.00002397 49.0
YHH3_k127_7368514_8 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000539 43.0
YHH3_k127_7413375_0 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 589.0
YHH3_k127_7413375_1 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00335,K18331,K22339 - 1.12.1.3,1.17.1.11,1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 343.0
YHH3_k127_7413375_2 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000449 327.0
YHH3_k127_7413375_3 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000104 170.0
YHH3_k127_7413375_4 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.000000000000000003213 89.0
YHH3_k127_7457613_0 elongation factor G domain IV K02355 - - 6.042e-205 660.0
YHH3_k127_7457613_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 5.475e-203 658.0
YHH3_k127_7457613_10 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004102 283.0
YHH3_k127_7457613_11 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.00000000000000000000000000000000000000000000008471 182.0
YHH3_k127_7457613_12 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000002541 97.0
YHH3_k127_7457613_13 - - - - 0.000000000000000000007138 95.0
YHH3_k127_7457613_14 - - - - 0.00003924 55.0
YHH3_k127_7457613_2 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 516.0
YHH3_k127_7457613_3 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0000018,GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0032300,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 452.0
YHH3_k127_7457613_4 PFAM PfkB domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 432.0
YHH3_k127_7457613_5 Belongs to the peptidase M16 family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 413.0
YHH3_k127_7457613_6 Peptidase M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 412.0
YHH3_k127_7457613_7 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 381.0
YHH3_k127_7457613_8 ACT domain K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411 375.0
YHH3_k127_7457613_9 PFAM Integral membrane protein TerC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 332.0
YHH3_k127_7510527_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K02660,K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 374.0
YHH3_k127_7510527_1 Twitching motility two-component system response regulator PilH K02658 - - 0.00000000000000000000000000000000000000002371 155.0
YHH3_k127_7510527_2 Signal transducing histidine kinase, homodimeric domain K02487,K03407,K06596 - 2.7.13.3 0.0000000000000000000000000003954 118.0
YHH3_k127_7510527_3 Domain of unknown function (DUF4388) - - - 0.00000000000000000000001765 111.0
YHH3_k127_7510527_4 PFAM CheW domain protein K03408 - - 0.000000000000000000399 93.0
YHH3_k127_7530009_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 1.655e-260 837.0
YHH3_k127_7530009_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533 - 3.6.3.4 3.747e-244 779.0
YHH3_k127_7530009_10 Bacterial regulatory proteins, tetR family K09017 - - 0.0000000000000001961 89.0
YHH3_k127_7530009_11 Cytochrome oxidase maturation protein - - - 0.00000000000003023 75.0
YHH3_k127_7530009_12 FixH - - - 0.00000001639 62.0
YHH3_k127_7530009_2 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 1.871e-220 687.0
YHH3_k127_7530009_3 NAD(P)H-binding K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000088 385.0
YHH3_k127_7530009_4 Cation efflux family K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000001768 248.0
YHH3_k127_7530009_5 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.000000000000000000000000000000000000000000000000000000000001757 218.0
YHH3_k127_7530009_6 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.0000000000000000000000000000000000000000000000000000001518 202.0
YHH3_k127_7530009_7 acetyltransferase - - - 0.0000000000000000000000000000000000000000001092 161.0
YHH3_k127_7530009_8 FixH - - - 0.000000000000000002833 90.0
YHH3_k127_7530009_9 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.00000000000000003015 94.0
YHH3_k127_754375_0 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 563.0
YHH3_k127_754375_1 Chalcone and stilbene synthases, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002378 477.0
YHH3_k127_754375_2 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K02298 - 1.10.3.10,1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 442.0
YHH3_k127_754375_3 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001939 246.0
YHH3_k127_754375_4 Transposase - - - 0.000000000000000000000000000000000000000002632 161.0
YHH3_k127_7556916_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 5.442e-264 827.0
YHH3_k127_7556916_1 Ami_3 K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007377 334.0
YHH3_k127_7556916_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000802 302.0
YHH3_k127_7556916_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000009355 213.0
YHH3_k127_7556916_4 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000002632 209.0
YHH3_k127_7556916_5 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000000002833 154.0
YHH3_k127_7556916_6 zinc-ribbon domain - - - 0.0000000000000000009076 93.0
YHH3_k127_7556916_7 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000003049 72.0
YHH3_k127_7562049_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 303.0
YHH3_k127_7562049_1 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000002854 237.0
YHH3_k127_7562049_2 Psort location Cytoplasmic, score 8.96 - - - 0.000000000000000000000000000000001051 134.0
YHH3_k127_7562049_3 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000000000000000000004121 98.0
YHH3_k127_7562049_4 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.0000000000000000009777 87.0
YHH3_k127_7562049_5 addiction module component, TIGR02574 family - - - 0.00000000000000003474 83.0
YHH3_k127_7586557_0 PFAM glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 349.0
YHH3_k127_7586557_1 methyltransferase - - - 0.000000000000000000000000000000000000000000000202 176.0
YHH3_k127_7586557_2 Tetratricopeptide repeat - - - 0.000000001611 63.0
YHH3_k127_7586557_3 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000001286 56.0
YHH3_k127_7623861_0 SMART Elongator protein 3 MiaB NifB - - - 9.455e-228 711.0
YHH3_k127_7623861_1 PFAM Cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002865 383.0
YHH3_k127_7623861_2 cytochrome c biogenesis protein K07399 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 392.0
YHH3_k127_7623861_3 SMART Elongator protein 3 MiaB NifB K04034 - 1.21.98.3 0.0000000000000000000000000000000000005553 142.0
YHH3_k127_7623861_5 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.0000000000000000000000005858 108.0
YHH3_k127_7623861_7 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.0000000000000001112 91.0
YHH3_k127_7623861_9 Polyketide cyclase / dehydrase and lipid transport - - - 0.00004449 52.0
YHH3_k127_7742931_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00437,K05922,K06281 - 1.12.2.1,1.12.5.1,1.12.99.6 5.98e-229 717.0
YHH3_k127_7742931_1 PFAM Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007373 298.0
YHH3_k127_7742931_2 Hydrogenase maturation protease K03605 - - 0.00000000000000000000000000000000000001715 151.0
YHH3_k127_7742931_3 Belongs to the NiFe NiFeSe hydrogenase large subunit family K05922,K06281 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0009897,GO:0009986,GO:0016020,GO:0016151,GO:0019897,GO:0019898,GO:0031232,GO:0031236,GO:0043167,GO:0043169,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0071944,GO:0098552,GO:0098567 1.12.5.1,1.12.99.6 0.0000000000000000000000000002502 114.0
YHH3_k127_7760336_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 3.022e-218 681.0
YHH3_k127_7760336_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 602.0
YHH3_k127_7760336_10 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000002668 246.0
YHH3_k127_7760336_11 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000000000001257 227.0
YHH3_k127_7760336_12 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000000000000000000000000000000001429 222.0
YHH3_k127_7760336_13 histidine kinase, HAMP K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000001233 228.0
YHH3_k127_7760336_14 Forms part of the polypeptide exit tunnel K02926 - - 0.000000000000000000000000000000000000000000000000000000000005641 213.0
YHH3_k127_7760336_15 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000261 201.0
YHH3_k127_7760336_16 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000004596 201.0
YHH3_k127_7760336_17 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000006286 200.0
YHH3_k127_7760336_18 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000000000000000297 197.0
YHH3_k127_7760336_19 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000004836 205.0
YHH3_k127_7760336_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007279 398.0
YHH3_k127_7760336_20 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000001282 178.0
YHH3_k127_7760336_21 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000002216 179.0
YHH3_k127_7760336_22 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000000000001751 168.0
YHH3_k127_7760336_23 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000005041 153.0
YHH3_k127_7760336_24 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000000009597 147.0
YHH3_k127_7760336_25 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000000000017 141.0
YHH3_k127_7760336_26 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000003584 145.0
YHH3_k127_7760336_27 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000000006648 127.0
YHH3_k127_7760336_28 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000001047 124.0
YHH3_k127_7760336_29 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000000005937 114.0
YHH3_k127_7760336_3 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 391.0
YHH3_k127_7760336_30 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000000000000000000000001074 114.0
YHH3_k127_7760336_31 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000007677 104.0
YHH3_k127_7760336_32 Ribosomal protein L30 K02907 - - 0.000000000000005486 76.0
YHH3_k127_7760336_33 Ribosomal L29 protein K02904 - - 0.00000000000004535 74.0
YHH3_k127_7760336_34 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000002446 67.0
YHH3_k127_7760336_4 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002811 333.0
YHH3_k127_7760336_5 Methionine aminopeptidase K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 323.0
YHH3_k127_7760336_6 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003748 301.0
YHH3_k127_7760336_7 metal-dependent phosphohydrolase HD region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003677 310.0
YHH3_k127_7760336_8 ribosomal L5P family C-terminus K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003461 261.0
YHH3_k127_7760336_9 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009289 260.0
YHH3_k127_7765546_0 metal-dependent phosphohydrolase, HD sub domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 314.0
YHH3_k127_7860136_0 Transcriptional regulator K18136 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000159 258.0
YHH3_k127_7903563_0 Transcriptional regulator K11921,K19338 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 325.0
YHH3_k127_7903563_1 GYD domain - - - 0.0000000000000000000000000000000000000873 145.0
YHH3_k127_7903563_2 Permease family K06901 - - 0.000000000000000000000000000000004703 129.0
YHH3_k127_7903563_3 Competence protein ComEC K02238 - - 0.0000000000000000000000003598 110.0
YHH3_k127_7903563_4 Protein of unknown function (DUF3187) - - - 0.000000000000000000001481 107.0
YHH3_k127_7903563_5 Predicted RNA-binding protein - - - 0.000000006388 61.0
YHH3_k127_8010289_0 purine nucleobase transmembrane transporter activity K06901 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007957 449.0
YHH3_k127_8010289_1 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.0000000000000000000000000000000000000000000000000000001726 197.0
YHH3_k127_8072722_0 Voltage gated chloride channel K03281 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004253 571.0
YHH3_k127_8072722_1 glycosyl transferase family 2 K21349 - 2.4.1.268 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 542.0
YHH3_k127_8072722_2 COG0463 Glycosyltransferases involved in cell wall biogenesis K13693 - 2.4.1.266 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 526.0
YHH3_k127_8072722_3 hydroxypyruvate reductase K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 497.0
YHH3_k127_8072722_4 hydrolase (HAD superfamily) K07026 - 3.1.3.70 0.000000000000000000000000000000000006656 147.0
YHH3_k127_8072722_5 transmembrane transport - - - 0.000000000000000000000000002339 120.0
YHH3_k127_8072722_6 Trehalose-phosphatase K16055 - 2.4.1.15,3.1.3.12 0.00000000000000000000000001748 113.0
YHH3_k127_8072722_7 transcription factor binding - - - 0.0000000000000000002561 95.0
YHH3_k127_8072722_8 Domain in cystathionine beta-synthase and other proteins. K07182 - - 0.0000000000000003562 80.0
YHH3_k127_8072722_9 Copper resistance protein CopZ K07213 - - 0.0006817 46.0
YHH3_k127_807451_0 Belongs to the mannose-6-phosphate isomerase type 2 family K16011 - 2.7.7.13,5.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003607 510.0
YHH3_k127_807451_1 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 471.0
YHH3_k127_807451_2 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K15778 - 5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 429.0
YHH3_k127_807451_3 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase K00996 - 2.7.8.6 0.00000000000000000000000000000000000000000000001619 183.0
YHH3_k127_8078313_0 FAD dependent oxidoreductase K07137 - - 1.449e-229 721.0
YHH3_k127_8078313_1 Short-chain dehydrogenase reductase Sdr - - - 2.133e-220 694.0
YHH3_k127_8078313_11 NlpC/P60 family - - - 0.000000000000000000000000002949 114.0
YHH3_k127_8078313_12 FR47-like protein - - - 0.00000000000009817 75.0
YHH3_k127_8078313_13 Response regulator, receiver - - - 0.0007058 50.0
YHH3_k127_8078313_2 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 587.0
YHH3_k127_8078313_3 Orn/Lys/Arg decarboxylase, C-terminal domain K01582,K01585 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008923,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564 4.1.1.18,4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009875 578.0
YHH3_k127_8078313_4 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 GO:0003674,GO:0003824,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0010487,GO:0016740,GO:0016765,GO:0034641,GO:0042401,GO:0043919,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0071704,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004743 421.0
YHH3_k127_8078313_5 RNA pseudouridylate synthase K06175 - 5.4.99.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 296.0
YHH3_k127_8078313_6 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001407 251.0
YHH3_k127_8078313_7 PFAM Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000001045 235.0
YHH3_k127_8078313_8 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.00000000000000000000000000000000000000000000000000006271 189.0
YHH3_k127_8119915_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003119 503.0
YHH3_k127_8119915_10 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000122 77.0
YHH3_k127_8119915_2 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003792 328.0
YHH3_k127_8119915_3 PFAM ABC transporter related K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000007229 231.0
YHH3_k127_8119915_4 it plays a direct role in the translocation of protons across the membrane K02108 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000000000000000000000000002939 215.0
YHH3_k127_8119915_5 - - - - 0.000000000000000000000000000000000000000000000001754 184.0
YHH3_k127_8119915_6 ferroxidase activity K03594 GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0097577,GO:0098771 1.16.3.1 0.000000000000000000000000000000000000000002928 160.0
YHH3_k127_8119915_7 PFAM Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.00000000000000000000000005412 108.0
YHH3_k127_8119915_9 Copper chaperone PCu(A)C K07152,K09796 - - 0.00000000000000513 81.0
YHH3_k127_8153342_0 denitrification pathway - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004393 319.0
YHH3_k127_8153342_1 Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein) K03620,K08354 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000005609 261.0
YHH3_k127_8153342_2 TPR repeat - - - 0.0000000000000000000000006942 117.0
YHH3_k127_8153342_3 XRE family transcriptional regulator K07667 - - 0.00005727 54.0
YHH3_k127_8236116_0 PAS domain K09155 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003597 259.0
YHH3_k127_8282572_0 Large extracellular alpha-helical protein K06894 - - 0.0 2136.0
YHH3_k127_8282572_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 362.0
YHH3_k127_8282572_2 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 372.0
YHH3_k127_8282572_3 SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 317.0
YHH3_k127_8282572_4 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000005119 213.0
YHH3_k127_8282572_5 chlorophyll binding - - - 0.0000000000000000000000000000000000000000000000000000009004 197.0
YHH3_k127_8282572_6 metal cluster binding - - - 0.0000000000000000000000000000000000000000000000000001956 194.0
YHH3_k127_8282572_7 YARHG - - - 0.0000000000001115 83.0
YHH3_k127_8282572_8 Penicillin-Binding Protein C-terminus Family K05367 - 2.4.1.129 0.00000000003083 65.0
YHH3_k127_8429921_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 6.277e-277 865.0
YHH3_k127_8429921_1 glycolate transport K14393 - - 0.0000000000000000001041 90.0
YHH3_k127_8433651_0 low molecular weight K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000007672 170.0
YHH3_k127_8433651_1 Cytochrome b/b6/petB K00412,K03888 - - 0.000000000000000000000000005889 111.0
YHH3_k127_8433651_2 Thioredoxin domain - - - 0.0000000000000000002035 90.0
YHH3_k127_8433651_3 Domain of unknown function (DUF2703) - - - 0.000000000182 67.0
YHH3_k127_8433651_4 ABC-type transport system involved in Fe-S cluster assembly, ATPase component K09013 - - 0.000005509 50.0
YHH3_k127_8433651_5 Iron-sulphur cluster biosynthesis K13628 - - 0.0002932 45.0
YHH3_k127_8502645_0 B3/4 domain K01890 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 546.0
YHH3_k127_8502645_1 AAA domain, putative AbiEii toxin, Type IV TA system K02006 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002037 289.0
YHH3_k127_8502645_10 PDGLE domain K02009 - - 0.00000000000000003888 91.0
YHH3_k127_8502645_2 cobalt ion transport K02007 GO:0000041,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015675,GO:0016020,GO:0016021,GO:0030001,GO:0031224,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008895 263.0
YHH3_k127_8502645_3 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000000000000000002686 243.0
YHH3_k127_8502645_4 Cobalt transport protein K02008 - - 0.0000000000000000000000000000000000000000000000000000000000000003403 230.0
YHH3_k127_8502645_5 nickel-responsive regulator K07722 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000004605 190.0
YHH3_k127_8502645_6 PFAM formylmethanofuran dehydrogenase, subunit E region K11261 - 1.2.7.12 0.0000000000000000000000000000000000000000000000002169 183.0
YHH3_k127_8502645_7 OmpA family K02557 - - 0.000000000000000000000000000000000000000000000006363 183.0
YHH3_k127_8502645_8 - - - - 0.0000000000000000000000000000000000000000000002958 177.0
YHH3_k127_8502645_9 TIGRFAM riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.00000000000000000000000000002749 127.0
YHH3_k127_8502947_0 PFAM magnesium chelatase ChlI subunit K07391 - - 9.811e-212 670.0
YHH3_k127_8502947_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003637 439.0
YHH3_k127_8502947_2 Universal stress protein family - - - 0.000000000000000000000000000000000008089 142.0
YHH3_k127_8502947_3 cysteine-type peptidase activity - - - 0.000000000000001551 90.0
YHH3_k127_8502947_4 Ferritin-like domain K03594 - 1.16.3.1 0.0000002499 53.0
YHH3_k127_8513697_0 Domain of unknown function (DUF4931) K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002617 529.0
YHH3_k127_8513697_1 Belongs to the PEP-utilizing enzyme family K01006,K22424 - 2.7.3.13,2.7.9.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 498.0
YHH3_k127_8513697_2 membrane K08984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001963 278.0
YHH3_k127_8513697_3 Fic/DOC family K07341 - - 0.0000000000000000000000000000000000000001811 153.0
YHH3_k127_8513697_4 PFAM SpoVT AbrB - - - 0.000000000000000007816 85.0
YHH3_k127_8513697_5 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000003954 59.0
YHH3_k127_8560008_0 Ribosomal protein S1-like RNA-binding domain K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 483.0
YHH3_k127_8560008_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000001604 54.0
YHH3_k127_8599096_0 histidine kinase HAMP region domain protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 474.0
YHH3_k127_8599096_1 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02481,K11384 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 437.0
YHH3_k127_8599096_2 histidine kinase HAMP region domain protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003192 429.0
YHH3_k127_8599096_3 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000003054 247.0
YHH3_k127_8599096_4 PFAM CheW domain protein K03408 - - 0.000000000000000000000000000000000000000000000000000000000000000001586 231.0
YHH3_k127_8599096_5 Histidine kinase - - - 0.0000000000000001558 85.0
YHH3_k127_8599096_6 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.000006093 48.0
YHH3_k127_8599096_7 Tetratricopeptide repeat - - - 0.0001567 53.0
YHH3_k127_86775_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006414 569.0
YHH3_k127_86775_1 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 353.0
YHH3_k127_86775_2 PFAM CMP dCMP deaminase zinc-binding K01493 - 3.5.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000007654 252.0
YHH3_k127_86775_3 ATP cone domain K07738 - - 0.0000000000000000000000000000000000000000000000000000000002599 207.0
YHH3_k127_86775_4 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000007934 190.0
YHH3_k127_86775_5 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000001623 192.0
YHH3_k127_86775_6 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000004406 176.0
YHH3_k127_8750996_0 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 454.0
YHH3_k127_8750996_1 Acyl-transferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 299.0
YHH3_k127_8750996_2 Scramblase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001236 240.0
YHH3_k127_8750996_3 PFAM small multidrug resistance protein K11741 - - 0.00000000000000000000000000000000000000000000000001125 181.0
YHH3_k127_8750996_4 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000001289 175.0
YHH3_k127_8750996_5 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000002995 70.0
YHH3_k127_8753631_0 Sigma-54 interaction domain K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006339 431.0
YHH3_k127_8753631_1 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007778 419.0
YHH3_k127_8753631_10 NapC/NirT cytochrome c family, N-terminal region - - - 0.0000000000000000000000000000000004784 145.0
YHH3_k127_8753631_11 PFAM UspA - - - 0.00000000000000000000003569 114.0
YHH3_k127_8753631_12 PFAM histidine kinase, HAMP region domain protein K03406 - - 0.0000000000000006047 81.0
YHH3_k127_8753631_13 Universal stress protein family - - - 0.0000005607 57.0
YHH3_k127_8753631_2 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006403 318.0
YHH3_k127_8753631_3 histidine kinase HAMP region domain protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 304.0
YHH3_k127_8753631_4 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000006188 231.0
YHH3_k127_8753631_5 Belongs to the UPF0178 family K09768 - - 0.0000000000000000000000000000000000000000000000000000000000001027 215.0
YHH3_k127_8753631_6 Universal stress protein - - - 0.000000000000000000000000000000000000000000000000000000000001794 220.0
YHH3_k127_8753631_7 histidine kinase HAMP region domain protein K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000001558 212.0
YHH3_k127_8753631_8 Putative transmembrane protein (Alph_Pro_TM) - - - 0.000000000000000000000000000000000000000000000000000887 194.0
YHH3_k127_8753631_9 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000008851 162.0
YHH3_k127_8788762_0 response regulator K02481,K07715 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 510.0
YHH3_k127_8788762_1 Nitronate monooxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004053 500.0
YHH3_k127_8788762_10 deoxyhypusine monooxygenase activity - - - 0.000000000000000008817 89.0
YHH3_k127_8788762_11 Heavy-metal-associated domain K07213 - - 0.0000000000003817 71.0
YHH3_k127_8788762_12 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000001387 72.0
YHH3_k127_8788762_13 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00001659 55.0
YHH3_k127_8788762_2 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 366.0
YHH3_k127_8788762_3 Domains HisKA, HATPase_c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 325.0
YHH3_k127_8788762_4 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002849 264.0
YHH3_k127_8788762_5 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000000000000000000000000000000000000000000000000000000002415 213.0
YHH3_k127_8788762_6 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000001439 128.0
YHH3_k127_8788762_7 Domain of unknown function (DUF4253) - - - 0.00000000000000000000000000002682 125.0
YHH3_k127_8788762_8 - - - - 0.00000000000000000000000006252 117.0
YHH3_k127_8788762_9 PFAM RNA recognition motif - - - 0.000000000000000000000001276 107.0
YHH3_k127_8835360_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 1.302e-213 669.0
YHH3_k127_8835360_1 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009427 317.0
YHH3_k127_8835360_2 amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000007389 206.0
YHH3_k127_8835360_3 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000002323 157.0
YHH3_k127_8835360_4 PFAM thioesterase superfamily K02614 - - 0.0000000000000000000000000000000000000005507 153.0
YHH3_k127_8835360_5 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.000000001509 59.0
YHH3_k127_8844461_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000001767 194.0
YHH3_k127_8857793_0 Sigma-54 interaction domain - - - 6.699e-211 662.0
YHH3_k127_8857793_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004047 458.0
YHH3_k127_8857793_2 Tex-like protein N-terminal domain K06959 - - 0.00000000000000000000000000000000000000000000000000000000000000001202 228.0
YHH3_k127_8857793_3 Protein of unknown function (DUF4197) - - - 0.0000000000000000000000000000000000000000000000000000000000000003371 228.0
YHH3_k127_8857793_4 denitrification pathway - - - 0.0000000000000000000000000000000000000000000000000000001571 203.0
YHH3_k127_8857793_5 TIGRFAM addiction module antidote protein, HigA family K21498 - - 0.0000000000000000000000000000000000000000003425 161.0
YHH3_k127_8857793_6 PFAM Plasmid maintenance system killer K07334 - - 0.00000000000000000000000000000000000005115 149.0
YHH3_k127_8857793_7 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000002253 135.0
YHH3_k127_8857793_8 DnaK suppressor protein K06204 - - 0.0000000000000000001822 91.0
YHH3_k127_8857793_9 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000001426 51.0
YHH3_k127_9085842_0 FtsX-like permease family K02004 - - 1.405e-314 983.0
YHH3_k127_9085842_1 PFAM ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 340.0
YHH3_k127_915225_0 PFAM extracellular solute-binding protein, family 5 K02035,K13893 - - 2.537e-207 661.0
YHH3_k127_915225_1 Phosphoglycerate kinase K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 552.0
YHH3_k127_915225_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 447.0
YHH3_k127_915225_3 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003612 366.0
YHH3_k127_915225_4 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004741 312.0
YHH3_k127_915225_5 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000001161 240.0
YHH3_k127_915225_6 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000904 203.0
YHH3_k127_915225_7 Preprotein translocase SecG subunit K03075 - - 0.0000000000000000005432 90.0
YHH3_k127_915225_8 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000001669 55.0
YHH3_k127_9175009_0 Domain of unknown function (DUF1957) K16149 - 2.4.1.18 1.043e-257 802.0
YHH3_k127_9175009_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003504 509.0
YHH3_k127_9175009_2 FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004393 493.0
YHH3_k127_9175009_3 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 408.0
YHH3_k127_9175009_4 PFAM CheW domain protein K03408 - - 0.00000000000000000000000000000000000000000000000000000000000004142 218.0
YHH3_k127_9175009_5 Domain of unknown function (DUF4912) K09942 - - 0.00000000000000000000000000000000004172 147.0
YHH3_k127_9175009_6 - - - - 0.000000000000000000000000000000267 128.0
YHH3_k127_9175009_7 - - - - 0.0000000000000000000000000008708 116.0
YHH3_k127_9175009_9 chemotaxis K03406 - - 0.00085 45.0
YHH3_k127_9276032_0 ATP synthase alpha/beta family, nucleotide-binding domain K02118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005032 470.0
YHH3_k127_9276032_1 Cytochrome C biogenesis protein - - - 0.0000000000000000000001534 105.0
YHH3_k127_9304908_0 Molybdopterin oxidoreductase Fe4S4 domain K00123,K22341 - 1.17.1.11,1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 608.0
YHH3_k127_9304908_1 Formate--tetrahydrofolate ligase K01938 - 6.3.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 547.0
YHH3_k127_9304908_10 - - - - 0.000000000000000001347 91.0
YHH3_k127_9304908_11 S4 domain protein - - - 0.0000000000000001246 83.0
YHH3_k127_9304908_12 Protein of unknown function (DUF402) - - - 0.0000000000008904 74.0
YHH3_k127_9304908_2 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 454.0
YHH3_k127_9304908_3 molybdopterin oxidoreductase Fe4S4 region K05299 - 1.17.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 394.0
YHH3_k127_9304908_4 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003599 328.0
YHH3_k127_9304908_5 phosphorelay signal transduction system K02535,K13599,K16363 - 3.5.1.108,4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000618 327.0
YHH3_k127_9304908_6 Pfam SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004466 285.0
YHH3_k127_9304908_7 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001139 277.0
YHH3_k127_9304908_8 Extradiol ring-cleavage dioxygenase class III protein subunit B K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002599 269.0
YHH3_k127_9304908_9 cyclic nucleotide-binding - - - 0.00000000000000000000000004986 118.0
YHH3_k127_9358716_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 4.133e-217 698.0
YHH3_k127_9358716_1 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007558 336.0
YHH3_k127_9358716_2 protein with SCP PR1 domains - - - 0.000000000000000000000000000000000000000000000113 175.0
YHH3_k127_9358716_3 - - - - 0.000000000000000000000000000000000000000000006164 167.0
YHH3_k127_9358716_4 signal-transduction protein containing cAMP-binding and CBS domains - - - 0.0000000000000000000000000000000000004456 147.0
YHH3_k127_9358716_5 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000003879 77.0
YHH3_k127_9358716_6 NosL K19342 - - 0.00000000007473 69.0
YHH3_k127_9366778_0 BadF BadG BcrA BcrD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008861 357.0
YHH3_k127_9366778_1 - - - - 0.0000000000000000000000000000000000000000000000001841 182.0
YHH3_k127_9366778_2 YoeB-like toxin of bacterial type II toxin-antitoxin system - - - 0.00000000000000000000000000000000001881 138.0
YHH3_k127_9366778_3 Antitoxin component of a toxin-antitoxin (TA) module K08591,K19159 - 2.3.1.15 0.0000000000000000000000000008274 114.0
YHH3_k127_9366778_4 phosphorelay signal transduction system - - - 0.000000001966 67.0
YHH3_k127_9368610_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008555 467.0
YHH3_k127_9368610_1 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004029 413.0
YHH3_k127_9368610_10 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000001045 235.0
YHH3_k127_9368610_11 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000004855 230.0
YHH3_k127_9368610_12 adenylylsulfate kinase activity K00860,K00955 - 2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000001449 156.0
YHH3_k127_9368610_13 NapC/NirT cytochrome c family, N-terminal region - - - 0.00000000000000000000000000000000001929 146.0
YHH3_k127_9368610_14 - - - - 0.000000000000000000000000000003905 131.0
YHH3_k127_9368610_16 Domain of unknown function (DUF4388) - - - 0.0000000003651 68.0
YHH3_k127_9368610_17 Domain of unknown function (DUF3786) - - - 0.000000998 58.0
YHH3_k127_9368610_18 Fic/DOC family - - - 0.00008068 48.0
YHH3_k127_9368610_2 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004137 412.0
YHH3_k127_9368610_3 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000728 368.0
YHH3_k127_9368610_4 PFAM asparagine synthase K06864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 305.0
YHH3_k127_9368610_5 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 301.0
YHH3_k127_9368610_6 Thiamine biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006925 296.0
YHH3_k127_9368610_7 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 300.0
YHH3_k127_9368610_8 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000576 268.0
YHH3_k127_9368610_9 HNH nucleases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008827 259.0
YHH3_k127_937121_0 COG0058 Glucan phosphorylase - - - 6.078e-252 789.0
YHH3_k127_937121_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.252e-195 617.0
YHH3_k127_937121_10 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000001167 185.0
YHH3_k127_937121_11 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.0000000000000000000000000000000000000000000009241 171.0
YHH3_k127_937121_12 NUDIX domain K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000009578 162.0
YHH3_k127_937121_13 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.00000000000000000000000005235 112.0
YHH3_k127_937121_14 Zincin-like metallopeptidase - - - 0.000000000000000000000002892 107.0
YHH3_k127_937121_15 cyclic diguanylate phosphodiesterase - - - 0.000000000000000002875 86.0
YHH3_k127_937121_16 antisigma factor binding K04749 - - 0.00000000000000008128 86.0
YHH3_k127_937121_17 Putative zinc- or iron-chelating domain - - - 0.0000000000000006574 85.0
YHH3_k127_937121_18 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.0000000001166 72.0
YHH3_k127_937121_2 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835,K01840 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 546.0
YHH3_k127_937121_3 PFAM peptidase M48 Ste24p K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003686 503.0
YHH3_k127_937121_4 PFAM tRNA synthetase, class II (G, H, P and S) K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003361 465.0
YHH3_k127_937121_5 metal-dependent phosphohydrolase, HD sub domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 427.0
YHH3_k127_937121_6 Protein phosphatase 2C domain K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006921 389.0
YHH3_k127_937121_7 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 395.0
YHH3_k127_937121_8 PFAM ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005052 323.0
YHH3_k127_937121_9 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000000000000001256 195.0
YHH3_k127_9384825_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 362.0
YHH3_k127_9384825_1 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00000000000000000000000000000000002272 136.0
YHH3_k127_9384825_2 Plasmid stabilization system - - - 0.00000000000000000000000000000149 123.0
YHH3_k127_9384825_3 Belongs to the ompA family - - - 0.0000000000007913 80.0
YHH3_k127_9441877_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 1.497e-321 1007.0
YHH3_k127_9441877_1 pfam abc1 K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000003652 231.0
YHH3_k127_9441877_2 RecX family K03565 - - 0.00000000000000000000007801 105.0
YHH3_k127_9441877_3 Addiction module toxin, RelE StbE family K06218 - - 0.00000000000000000006836 92.0
YHH3_k127_9441877_4 - - - - 0.0000000000003319 74.0
YHH3_k127_9441877_6 toxin-antitoxin pair type II binding - - - 0.00000008606 62.0
YHH3_k127_945405_0 Domain of unknown function (DUF4139) - - - 4.34e-202 641.0
YHH3_k127_945405_1 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008937 383.0
YHH3_k127_945405_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008211 355.0
YHH3_k127_945405_3 PFAM Isochorismatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001407 243.0
YHH3_k127_945405_4 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000004427 203.0
YHH3_k127_945405_5 CHASE K02488,K21009 - 2.7.7.65 0.00000000000000000000000000000000000000000000000001867 192.0
YHH3_k127_945405_6 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000196 114.0
YHH3_k127_945405_7 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000004803 89.0
YHH3_k127_945405_8 Putative zinc-finger - - - 0.000000000000000001525 98.0
YHH3_k127_945405_9 Glutaredoxin K03676 - - 0.00000000000001839 74.0
YHH3_k127_9455551_0 PFAM Carbamoyltransferase K00612 - - 2.989e-286 890.0
YHH3_k127_9455551_1 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000001548 233.0
YHH3_k127_9455551_2 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000008509 234.0
YHH3_k127_9455551_3 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000001275 201.0
YHH3_k127_9455551_4 ATPase of the PP-loop superfamily implicated in cell cycle control - - - 0.0000000000000000000000000000000000000000000002392 171.0
YHH3_k127_9455551_6 - - - - 0.00000000003684 66.0
YHH3_k127_9455551_7 glycosyl transferase - - - 0.000009789 57.0
YHH3_k127_9462855_0 Chorismate mutase type II K14170 - 4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 431.0
YHH3_k127_9462855_1 Aminotransferase class I and II K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 390.0
YHH3_k127_9462855_2 NeuB family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000002063 158.0
YHH3_k127_9497231_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537,K01539 - 3.6.3.8,3.6.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 476.0
YHH3_k127_9497231_1 CO dehydrogenase acetyl-CoA synthase gamma subunit (Corrinoid Fe-S protein) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 314.0
YHH3_k127_9497231_2 Bacterial protein of unknown function (DUF922) - - - 0.0000000000000000002798 96.0
YHH3_k127_9586994_0 Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro K10206 - 2.6.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 410.0
YHH3_k127_9586994_1 fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 304.0
YHH3_k127_9586994_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000003131 259.0
YHH3_k127_9586994_3 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000003454 188.0
YHH3_k127_9597370_0 peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 456.0
YHH3_k127_9597370_1 - - - - 0.00000000000000000000000000000000000004293 148.0
YHH3_k127_9597370_2 phosphoribosyl-ATP diphosphatase activity K01523 - 3.6.1.31 0.000000000000000000003235 101.0
YHH3_k127_9597370_3 Belongs to the peptidase S1C family K04691,K04771,K04772 - 3.4.21.107 0.00008139 56.0
YHH3_k127_9655409_0 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000036 466.0
YHH3_k127_9655409_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000525 384.0
YHH3_k127_9655409_2 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002704 253.0
YHH3_k127_9655409_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002021 246.0
YHH3_k127_9655409_4 Domain of unknown function (DUF4337) - - - 0.0000000000000000000000000000000000000000000000000000000000003369 216.0
YHH3_k127_9655409_5 LysM domain - - - 0.0000000000000000159 92.0
YHH3_k127_965725_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 326.0
YHH3_k127_965725_1 PFAM Cytochrome b5 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004537 308.0
YHH3_k127_965725_2 Cytochrome C and Quinol oxidase polypeptide I K04561 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016661,GO:0016662,GO:0016966,GO:0055114 1.7.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000371 293.0
YHH3_k127_965725_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 288.0
YHH3_k127_965725_4 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000006971 195.0
YHH3_k127_965725_5 4Fe-4S binding domain - - - 0.000000000000000000000000000000004363 140.0
YHH3_k127_965725_6 PFAM CBS domain K07182 - - 0.000000000000000000000007369 108.0
YHH3_k127_965725_7 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.00000000000004698 74.0
YHH3_k127_965725_8 HPP family K07168 - - 0.0000000000001071 73.0
YHH3_k127_965725_9 Cupin 2, conserved barrel domain protein - - - 0.0000000001189 66.0
YHH3_k127_965841_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1084.0
YHH3_k127_965841_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006282 551.0
YHH3_k127_965841_2 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 546.0
YHH3_k127_965841_3 radical SAM domain protein K04070 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002985 352.0
YHH3_k127_965841_4 acid phosphatase activity - - - 0.00000000000000000000000000000000000000000000002373 181.0
YHH3_k127_965841_5 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000009411 98.0
YHH3_k127_9705752_0 Pyridine nucleotide-disulphide oxidoreductase K00520 - 1.16.1.1 0.000000000000000000000000000000000000000000000000000000000000002883 229.0
YHH3_k127_9705752_1 protein conserved in bacteria (DUF2064) K09931 - - 0.00000000000000000000000000000000000000000000000000000000001456 214.0
YHH3_k127_9705752_2 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000001812 158.0
YHH3_k127_9705752_3 Flagellar hook protein flgE - - - 0.0000000000000000000000003232 116.0
YHH3_k127_9737811_0 SMART Nucleotide binding protein, PINc K07175 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 546.0
YHH3_k127_9737811_1 Belongs to the SUA5 family K07566 - 2.7.7.87 0.00000000000001382 75.0
YHH3_k127_9767205_0 Addiction module antidote protein, HigA K18831 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005756 410.0
YHH3_k127_9767205_1 BAAT / Acyl-CoA thioester hydrolase C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 403.0
YHH3_k127_9767205_2 PFAM DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003336 269.0
YHH3_k127_9767205_3 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.00000000000000000000000000000000000000000000000001112 184.0
YHH3_k127_9767205_4 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000000002511 184.0
YHH3_k127_9767205_5 RelE-like toxin of type II toxin-antitoxin system HigB - - - 0.0000000000000000000000000000000004844 133.0
YHH3_k127_9767205_6 Protein involved in outer membrane biogenesis - - - 0.00000000000000000002976 99.0
YHH3_k127_9767205_7 toxin-antitoxin pair type II binding K08591,K19159 GO:0003674,GO:0005488,GO:0005515,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0040008,GO:0045927,GO:0048518,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097351,GO:1903506,GO:2000112,GO:2001141 2.3.1.15 0.00000006025 58.0
YHH3_k127_9767205_8 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00007302 46.0
YHH3_k127_9808371_0 NiFe/NiFeSe hydrogenase small subunit C-terminal K06282 - 1.12.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 437.0
YHH3_k127_9808371_1 Cytochrome C oxidase, cbb3-type, subunit III K08906 - - 0.00000000000000000000000008798 109.0
YHH3_k127_9808371_2 Solute carrier family 35 - - - 0.0000000000005343 76.0
YHH3_k127_9846936_0 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 0.0 1245.0
YHH3_k127_9846936_1 Domain in cystathionine beta-synthase and other proteins. K07182 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007281 366.0
YHH3_k127_9846936_2 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000007625 242.0
YHH3_k127_9846936_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00124 - - 0.00000001937 55.0
YHH3_k127_9889334_0 AICARFT/IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 361.0
YHH3_k127_9889334_1 PFAM Cysteine-rich domain K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000003355 238.0
YHH3_k127_9889334_2 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000001322 134.0
YHH3_k127_9889334_3 Tetratricopeptide repeat - - - 0.00000000000000000000000004349 115.0
YHH3_k127_9889334_4 monooxygenase activity K00688,K15760,K16157,K16242,K18223,K22353,K22357 GO:0003674,GO:0003824,GO:0004497,GO:0005575,GO:0008150,GO:0008152,GO:0009987,GO:0015049,GO:0015050,GO:0015947,GO:0016491,GO:0016705,GO:0016709,GO:0032991,GO:0043446,GO:0044237,GO:0055114,GO:0071704,GO:1902494 1.14.13.227,1.14.13.236,1.14.13.25,1.14.13.69,2.4.1.1 0.0000002624 57.0
YHH3_k127_9923464_0 Homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003129 540.0
YHH3_k127_9923464_1 Involved in molybdopterin and thiamine biosynthesis, family 2 K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 375.0
YHH3_k127_9923464_2 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 387.0
YHH3_k127_9923464_3 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000006626 178.0
YHH3_k127_9923464_4 ThiS family K03636 - - 0.00000000000000000000000000001312 121.0
YHH3_k127_9923464_5 JAB/MPN domain - - - 0.00000000000000000000000006387 112.0
YHH3_k127_9923464_6 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000001051 112.0
YHH3_k127_9923464_7 sulfur carrier activity - - - 0.00000000000000000000006646 102.0
YHH3_k127_9923464_8 NIL - - - 0.0000000000000000000001143 104.0