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Overview

ID MAG04565
Name YHH3_bin.26
Sample SMP0123
Taxonomy
Kingdom Bacteria
Phylum Patescibacteriota
Class Patescibacteriia
Order UBA9934
Family GWF2-40-263
Genus
Species
Assembly information
Completeness (%) 94.35
Contamination (%) 1.3
GC content (%) 50.0
N50 (bp) 31,496
Genome size (bp) 1,650,816

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes982

Gene name Description KEGG GOs EC E-value Score Sequence
YHH3_k127_10438899_0 RimK-like ATPgrasp N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 550.0
YHH3_k127_10438899_1 Glutamate-cysteine ligase family 2(GCS2) K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000553 403.0
YHH3_k127_10438899_2 Methyltransferase domain - - - 0.0000000865 63.0
YHH3_k127_10567467_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 2.174e-301 938.0
YHH3_k127_10567467_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005725 436.0
YHH3_k127_10567467_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000003385 240.0
YHH3_k127_10567467_3 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000000001828 209.0
YHH3_k127_10567467_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000699 196.0
YHH3_k127_10567467_5 metallopeptidase activity - - - 0.000000000000000000000000000000000005204 146.0
YHH3_k127_10567467_6 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.000000000000000000000000009076 120.0
YHH3_k127_10662769_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 1.276e-249 801.0
YHH3_k127_10662769_1 helicase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 443.0
YHH3_k127_10662769_10 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000001081 152.0
YHH3_k127_10662769_11 - - - - 0.000000000000000000000000000000000000003235 150.0
YHH3_k127_10662769_12 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions - - - 0.0000000000000000000000000000000000005835 142.0
YHH3_k127_10662769_13 Putative tRNA binding domain K06878 - - 0.0000000000000000000000000000000236 128.0
YHH3_k127_10662769_14 MazG nucleotide pyrophosphohydrolase domain - - - 0.0000000000000000000000000002106 119.0
YHH3_k127_10662769_15 Mazg nucleotide pyrophosphohydrolase - - - 0.000000000000000000000183 100.0
YHH3_k127_10662769_16 beta-lactamase domain protein - - - 0.00000000000000000000134 105.0
YHH3_k127_10662769_17 bis(5'-adenosyl)-triphosphatase activity - - - 0.00000000000000000001221 94.0
YHH3_k127_10662769_18 Transposase IS200 like - - - 0.0000000000000000002959 96.0
YHH3_k127_10662769_19 Methyltransferase domain - - - 0.0000000000000007998 85.0
YHH3_k127_10662769_2 helicase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006178 342.0
YHH3_k127_10662769_20 - - - - 0.000000002508 70.0
YHH3_k127_10662769_23 helicase activity K06915,K19172 - - 0.0000001418 64.0
YHH3_k127_10662769_24 - - - - 0.00001332 55.0
YHH3_k127_10662769_25 thiolester hydrolase activity K06889 - - 0.00001442 55.0
YHH3_k127_10662769_26 NUDIX domain K03574 - 3.6.1.55 0.00007285 51.0
YHH3_k127_10662769_27 amine dehydrogenase activity - - - 0.00014 56.0
YHH3_k127_10662769_3 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 GO:0002097,GO:0002098,GO:0002143,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 334.0
YHH3_k127_10662769_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002991 248.0
YHH3_k127_10662769_5 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03072,K12257 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000009224 262.0
YHH3_k127_10662769_6 HD domain K06885 - - 0.0000000000000000000000000000000000000000000000000000000000000164 231.0
YHH3_k127_10662769_7 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000009486 216.0
YHH3_k127_10662769_8 PFAM LemA family protein K03744 - - 0.0000000000000000000000000000000000000000000000002987 181.0
YHH3_k127_10662769_9 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000001644 174.0
YHH3_k127_1110511_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 5.72e-224 709.0
YHH3_k127_1110511_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000008175 212.0
YHH3_k127_1110511_2 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000002159 126.0
YHH3_k127_11242985_0 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 345.0
YHH3_k127_11242985_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000001098 232.0
YHH3_k127_11242985_2 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000122 230.0
YHH3_k127_11242985_3 LysR substrate binding domain K21703 - - 0.0000000000000000000000000000000008238 132.0
YHH3_k127_11242985_4 - - - - 0.0000000000000000000005945 99.0
YHH3_k127_11242985_5 FecR protein - - - 0.00000000003795 76.0
YHH3_k127_11393497_0 GTP-binding protein TypA K06207 - - 1.461e-220 702.0
YHH3_k127_11393497_1 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003484 437.0
YHH3_k127_11393497_10 Leucine-rich repeats, typical (most populated) subfamily K19613 - - 0.0000000000000000001225 95.0
YHH3_k127_11393497_11 Domain of unknown function (DUF4082) - - - 0.0000000291 67.0
YHH3_k127_11393497_2 PFAM glutaredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004508 355.0
YHH3_k127_11393497_4 PFAM CMP dCMP deaminase zinc-binding - - - 0.00000000000000000000000000000000000000000000000000000009625 198.0
YHH3_k127_11393497_5 Pentapeptide repeat protein - - - 0.000000000000000000000000000000000000000004349 162.0
YHH3_k127_11393497_6 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000000000000000000000000000003657 148.0
YHH3_k127_11393497_7 cell volume homeostasis K03316,K11105 - - 0.0000000000000000000000000000000000004822 156.0
YHH3_k127_11393497_8 Pectinacetylesterase K19882 GO:0000902,GO:0000904,GO:0003002,GO:0003674,GO:0003824,GO:0004620,GO:0004629,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0006464,GO:0006505,GO:0006507,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0006935,GO:0007275,GO:0007389,GO:0007399,GO:0007409,GO:0007411,GO:0007444,GO:0007447,GO:0007450,GO:0008045,GO:0008081,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009952,GO:0009953,GO:0009966,GO:0009968,GO:0009987,GO:0010646,GO:0010648,GO:0012505,GO:0016043,GO:0016298,GO:0016787,GO:0016788,GO:0019538,GO:0019637,GO:0021532,GO:0021915,GO:0022008,GO:0023051,GO:0023057,GO:0030030,GO:0030111,GO:0030154,GO:0030163,GO:0030178,GO:0030182,GO:0031175,GO:0031974,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0035220,GO:0035222,GO:0035295,GO:0035601,GO:0036211,GO:0040011,GO:0042157,GO:0042159,GO:0042221,GO:0042330,GO:0042578,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044255,GO:0044260,GO:0044267,GO:0044421,GO:0044422,GO:0044424,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046486,GO:0046488,GO:0048070,GO:0048073,GO:0048076,GO:0048190,GO:0048468,GO:0048513,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0052689,GO:0060429,GO:0060828,GO:0061564,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0090090,GO:0097485,GO:0098732,GO:0120036,GO:0120039,GO:1901135,GO:1901564,GO:1901565,GO:1901575,GO:1903509,GO:1990697,GO:1990699 3.1.1.98 0.000000000000000000000000000000000008798 151.0
YHH3_k127_11393497_9 HD domain - - - 0.000000000000000000000003336 108.0
YHH3_k127_11600424_0 Heavy metal transport detoxification protein K17686 - 3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003946 313.0
YHH3_k127_11600424_1 Cytochrome C biogenesis protein transmembrane region - - - 0.000000000000000000000000000000000000000000000000000000000000904 226.0
YHH3_k127_11680210_0 Male sterility protein K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 413.0
YHH3_k127_11680210_1 Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 344.0
YHH3_k127_11680210_10 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000005147 175.0
YHH3_k127_11680210_11 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.00000000000000000000000000000001065 136.0
YHH3_k127_11680210_12 self proteolysis - - - 0.000000000000000000000000000001169 140.0
YHH3_k127_11680210_13 Histone methylation protein DOT1 - - - 0.000000000000000000000000001019 119.0
YHH3_k127_11680210_14 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.000000000000000000000008044 109.0
YHH3_k127_11680210_15 pfam nudix K01515 - 3.6.1.13 0.00000000000000000002244 97.0
YHH3_k127_11680210_16 Uncharacterized conserved protein (DUF2304) K09153 - - 0.000000000000000001861 89.0
YHH3_k127_11680210_17 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.000000000000000003157 92.0
YHH3_k127_11680210_18 Psort location Cytoplasmic, score 8.96 K01515 - 3.6.1.13 0.000000000000001962 83.0
YHH3_k127_11680210_19 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000002922 79.0
YHH3_k127_11680210_2 ABC transporter K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 309.0
YHH3_k127_11680210_20 Domain of unknown function (DUF4215) - - - 0.000000000003349 81.0
YHH3_k127_11680210_21 Belongs to the glycosyl hydrolase 43 family K20276 - - 0.00000000005231 78.0
YHH3_k127_11680210_22 Tetratricopeptide repeat - - - 0.0000003453 60.0
YHH3_k127_11680210_23 Protein tyrosine kinase - - - 0.00005688 55.0
YHH3_k127_11680210_24 PFAM Cupin 2, conserved barrel domain protein - - - 0.0001645 52.0
YHH3_k127_11680210_25 - - - - 0.0007019 51.0
YHH3_k127_11680210_3 GDP-mannose 4,6 dehydratase K01710,K08678 - 4.1.1.35,4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000009729 260.0
YHH3_k127_11680210_4 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000003173 246.0
YHH3_k127_11680210_5 Belongs to the peptidase S8 family K08651 - 3.4.21.66 0.0000000000000000000000000000000000000000000000000000000000000000006352 252.0
YHH3_k127_11680210_6 PFAM Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000001194 207.0
YHH3_k127_11680210_7 PFAM Glycosyl transferase, family 2 K21304 GO:0003674,GO:0003824,GO:0016740 2.4.1.153 0.0000000000000000000000000000000000000000000000000003847 192.0
YHH3_k127_11680210_8 Rhamnose biosynthetic enzyme K12450 - 4.2.1.76 0.00000000000000000000000000000000000000000000001927 181.0
YHH3_k127_11680210_9 Glycosyl transferase, family 2 K07011 - - 0.0000000000000000000000000000000000000000000008337 180.0
YHH3_k127_11851102_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 5.198e-270 839.0
YHH3_k127_11851102_1 AAA domain, putative AbiEii toxin, Type IV TA system K06926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007613 290.0
YHH3_k127_11851102_2 Putative auto-transporter adhesin, head GIN domain - - - 0.000000000000000000000000000000000000000000000000006003 189.0
YHH3_k127_11851102_3 RloB-like protein - - - 0.00000000000000000000000000002962 124.0
YHH3_k127_11851102_4 Glycosyl transferases group 1 - - - 0.0000000007151 59.0
YHH3_k127_12567883_0 PFAM sodium hydrogen exchanger - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 487.0
YHH3_k127_12567883_1 ATPases associated with a variety of cellular activities K01990,K11050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009305 404.0
YHH3_k127_12567883_11 Methionine biosynthesis protein MetW - - - 0.0004131 51.0
YHH3_k127_12567883_2 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000001103 228.0
YHH3_k127_12567883_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000001972 194.0
YHH3_k127_12567883_4 PFAM ATP cone domain - - - 0.00000000000000000000000000000000000000000000000005076 188.0
YHH3_k127_12567883_5 Ham1 family K02428 - 3.6.1.66 0.00000000000000000000001422 108.0
YHH3_k127_12567883_6 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K10778 - 2.1.1.63 0.00000000000000000002884 92.0
YHH3_k127_12567883_7 Lipase maturation factor - - - 0.0000000000145 69.0
YHH3_k127_12567883_8 Cupin domain - - - 0.00000000001644 67.0
YHH3_k127_12567883_9 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.000002753 59.0
YHH3_k127_12579996_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 462.0
YHH3_k127_12579996_1 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 366.0
YHH3_k127_12579996_10 Evidence 5 No homology to any previously reported sequences K09005 - - 0.00000000000001042 80.0
YHH3_k127_12579996_11 peptidyl-tyrosine sulfation - - - 0.0000000001566 66.0
YHH3_k127_12579996_12 YbaB/EbfC DNA-binding family K06187,K09747 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 - 0.00000008048 57.0
YHH3_k127_12579996_13 Development and cell death domain K10442,K10443,K10446,K10450,K10457 GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005856,GO:0008150,GO:0008582,GO:0040008,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044087,GO:0044424,GO:0044464,GO:0045886,GO:0045926,GO:0048519,GO:0048523,GO:0048638,GO:0048640,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0051093,GO:0051128,GO:0051129,GO:0051239,GO:0051241,GO:0051960,GO:0051961,GO:0051963,GO:0051964,GO:0065007,GO:0065008,GO:1904396,GO:1904397,GO:1905809,GO:2000026 - 0.000008746 57.0
YHH3_k127_12579996_14 PaaX-like protein C-terminal domain K02616 - - 0.00006152 53.0
YHH3_k127_12579996_2 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000004733 238.0
YHH3_k127_12579996_3 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000001434 206.0
YHH3_k127_12579996_4 Glycosyltransferase, group 4 family K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000001017 196.0
YHH3_k127_12579996_5 Belongs to the RimK family K05844 - - 0.0000000000000000000000000000000000000000001083 171.0
YHH3_k127_12579996_6 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000000000003871 128.0
YHH3_k127_12579996_7 S23 ribosomal protein - - - 0.0000000000000000000000004275 108.0
YHH3_k127_12579996_8 quinone binding - - - 0.000000000000000004259 89.0
YHH3_k127_12579996_9 Tryptophan tyrosine permease family - - - 0.00000000000000003845 94.0
YHH3_k127_12763401_0 Catalyzes the attachment of glycine to tRNA(Gly) K01880 GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0016874,GO:0016875,GO:0046983,GO:0140098,GO:0140101 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003777 561.0
YHH3_k127_12763401_1 exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000531 303.0
YHH3_k127_12763401_10 VTC domain - - - 0.00000000000000000000002295 109.0
YHH3_k127_12763401_11 CotH kinase protein K06330 - - 0.00000000000000000000006236 116.0
YHH3_k127_12763401_12 cellulose binding - - - 0.0000000000000000000009075 107.0
YHH3_k127_12763401_13 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.0000000000000000001339 96.0
YHH3_k127_12763401_14 AICARFT/IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000255 90.0
YHH3_k127_12763401_15 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000009551 72.0
YHH3_k127_12763401_16 Pfam:DUF2233 - - - 0.00000000005481 73.0
YHH3_k127_12763401_17 PFAM PEGA domain - - - 0.0001117 55.0
YHH3_k127_12763401_18 - - - - 0.0001344 46.0
YHH3_k127_12763401_19 protein N-acetylglucosaminyltransferase activity - - - 0.0004353 51.0
YHH3_k127_12763401_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000001689 270.0
YHH3_k127_12763401_3 Belongs to the peptidase M16 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007702 270.0
YHH3_k127_12763401_4 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000005784 234.0
YHH3_k127_12763401_5 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000005827 171.0
YHH3_k127_12763401_6 Domain of unknown function (DUF4956) - - - 0.000000000000000000000000000000000005158 145.0
YHH3_k127_12763401_7 DNA polymerase III, delta' K02341 - 2.7.7.7 0.000000000000000000000000000004395 132.0
YHH3_k127_12763401_8 SPFH domain / Band 7 family - - - 0.00000000000000000000000000001964 129.0
YHH3_k127_12763401_9 Belongs to the bacterial histone-like protein family K03530 - - 0.000000000000000000000000001794 113.0
YHH3_k127_12885597_0 histidyl-tRNA aminoacylation K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 373.0
YHH3_k127_12885597_1 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.000000000000000000000000000000005166 135.0
YHH3_k127_12885597_2 Yqey-like protein K09117 - - 0.000000000000000000000000000007538 124.0
YHH3_k127_12885597_3 - - - - 0.00002944 56.0
YHH3_k127_1467887_0 ABC transporter K09812 GO:0000910,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0008356,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016043,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0032506,GO:0042173,GO:0043937,GO:0043938,GO:0044085,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051301,GO:0065007,GO:0070297,GO:0071840,GO:0071944,GO:0090529,GO:1902531 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001229 264.0
YHH3_k127_1467887_1 Hydrolases of the alpha beta superfamily K06889 - - 0.00000000000000000000000000000001259 139.0
YHH3_k127_1467887_2 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000001738 129.0
YHH3_k127_1467887_3 AAA domain K07028 - - 0.00000008204 61.0
YHH3_k127_1467887_4 HD superfamily hydrolase K06950 - - 0.0000001566 62.0
YHH3_k127_1467887_5 cell cycle K05589,K13052 - - 0.000004726 55.0
YHH3_k127_1467887_6 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.00005411 55.0
YHH3_k127_1549003_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000001269 121.0
YHH3_k127_1549003_1 protein involved in methicillin resistance K05363,K11693 - 2.3.2.10,2.3.2.16 0.000003312 54.0
YHH3_k127_1589220_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1015.0
YHH3_k127_1589220_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 1.863e-267 847.0
YHH3_k127_1589220_10 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 GO:0002161,GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0043906,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000383 390.0
YHH3_k127_1589220_11 NAD(P)-binding Rossmann-like domain K09516 - 1.3.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006159 384.0
YHH3_k127_1589220_12 PFAM Type II secretion system protein E K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 377.0
YHH3_k127_1589220_13 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003818 316.0
YHH3_k127_1589220_14 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0006355,GO:0006508,GO:0006515,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0042623,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051603,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006778 282.0
YHH3_k127_1589220_15 Shoulder domain K17266 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007912 277.0
YHH3_k127_1589220_16 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002386 281.0
YHH3_k127_1589220_17 PFAM Metallophosphoesterase K09769 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001951 258.0
YHH3_k127_1589220_18 riboflavin synthase, alpha K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000002306 229.0
YHH3_k127_1589220_19 rRNA (adenine-C2-)-methyltransferase activity K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000003167 235.0
YHH3_k127_1589220_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 616.0
YHH3_k127_1589220_20 PFAM RNA binding S1 domain protein K02945 - - 0.00000000000000000000000000000000000000000000000000000000000001743 231.0
YHH3_k127_1589220_21 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000005926 206.0
YHH3_k127_1589220_22 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.0000000000000000000000000000000000000000000000000000007469 204.0
YHH3_k127_1589220_23 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000001038 179.0
YHH3_k127_1589220_24 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.00000000000000000000000000000000000000000000006432 173.0
YHH3_k127_1589220_25 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000003084 173.0
YHH3_k127_1589220_26 PFAM VanW family protein - - - 0.00000000000000000000000000000000000000000000202 186.0
YHH3_k127_1589220_27 beta-lactamase domain protein K02238 - - 0.000000000000000000000000000000000000000000114 175.0
YHH3_k127_1589220_28 Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively K01243 - 3.2.2.9 0.0000000000000000000000000000000000000000001959 166.0
YHH3_k127_1589220_29 PFAM ComEC Rec2-related protein K02238 - - 0.000000000000000000000000000000000000000251 168.0
YHH3_k127_1589220_3 HsdM N-terminal domain K03427 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 580.0
YHH3_k127_1589220_30 domain protein K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000005581 155.0
YHH3_k127_1589220_31 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000006948 150.0
YHH3_k127_1589220_32 - - - - 0.000000000000000000000000000000001347 137.0
YHH3_k127_1589220_33 AI-2E family transporter - - - 0.00000000000000000000000000000001938 139.0
YHH3_k127_1589220_34 Thioredoxin-like domain K03671 - - 0.000000000000000000000000000001571 123.0
YHH3_k127_1589220_35 Domain of unknown function (DUF3841) - - - 0.0000000000000000000000000000047 126.0
YHH3_k127_1589220_36 Biotin and Thiamin Synthesis associated K03150 - 4.1.99.19 0.00000000000000000000000000009967 128.0
YHH3_k127_1589220_37 nucleotidyltransferase activity - - - 0.0000000000000000000000000003768 123.0
YHH3_k127_1589220_38 Type I restriction modification DNA specificity domain K01154 - 3.1.21.3 0.00000000000000000000000000403 112.0
YHH3_k127_1589220_39 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000004281 113.0
YHH3_k127_1589220_4 glutamine synthetase K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 518.0
YHH3_k127_1589220_40 Domain of unknown function (DUF3841) - - - 0.0000000000000000000000005656 113.0
YHH3_k127_1589220_41 AAA domain K00939,K13800 - 2.7.4.14,2.7.4.3 0.0000000000000000000000008289 111.0
YHH3_k127_1589220_42 Zincin-like metallopeptidase - - - 0.00000000000000000000002234 105.0
YHH3_k127_1589220_43 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.0000000000000000000001693 111.0
YHH3_k127_1589220_44 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 - 0.00000000000000000006785 94.0
YHH3_k127_1589220_45 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000146 89.0
YHH3_k127_1589220_46 RF-1 domain K15034 - - 0.000000000000000005508 91.0
YHH3_k127_1589220_47 Phosphotransferase enzyme family - - - 0.00000000000000001128 94.0
YHH3_k127_1589220_48 protein, homolog of phage Mu protein gp30 - - - 0.00000000000000001146 100.0
YHH3_k127_1589220_49 Putative ABC-transporter type IV - - - 0.000000000000000121 88.0
YHH3_k127_1589220_5 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 486.0
YHH3_k127_1589220_50 Endonuclease containing a URI domain K07461 - - 0.000000000000001244 80.0
YHH3_k127_1589220_51 Copper amine oxidase N-terminal domain - - - 0.000000000000001337 85.0
YHH3_k127_1589220_52 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000004319 74.0
YHH3_k127_1589220_53 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.00000000000476 72.0
YHH3_k127_1589220_54 Major Facilitator Superfamily K08222 - - 0.00000000002666 76.0
YHH3_k127_1589220_55 Zn-dependent - - - 0.00000000003503 70.0
YHH3_k127_1589220_56 Major Facilitator Superfamily - - - 0.00000000003921 75.0
YHH3_k127_1589220_57 Permease for cytosine purines, uracil, thiamine, allantoin K10974 - - 0.0000000184 60.0
YHH3_k127_1589220_58 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000003371 58.0
YHH3_k127_1589220_59 - - - - 0.00000004541 63.0
YHH3_k127_1589220_6 Endoribonuclease that initiates mRNA decay K18682 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 473.0
YHH3_k127_1589220_60 Protein phosphatase, Mg2 Mn2 dependent, 1N K19790 - 3.1.3.16 0.0000001913 62.0
YHH3_k127_1589220_61 transcription activator, effector binding - - - 0.000005036 56.0
YHH3_k127_1589220_62 - - - - 0.00009039 52.0
YHH3_k127_1589220_63 COG0464 ATPases of the AAA class - - - 0.0007012 53.0
YHH3_k127_1589220_7 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 423.0
YHH3_k127_1589220_8 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004011 405.0
YHH3_k127_1589220_9 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006555 390.0
YHH3_k127_1680821_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 2.551e-264 829.0
YHH3_k127_1680821_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003183 407.0
YHH3_k127_1680821_10 NUDIX domain K03574 - 3.6.1.55 0.000000000000000000000000000000000000002928 151.0
YHH3_k127_1680821_11 Hep Hag repeat protein - - - 0.00000000000000000009274 107.0
YHH3_k127_1680821_12 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000009921 88.0
YHH3_k127_1680821_13 DUF167 K09131 - - 0.00000000002448 68.0
YHH3_k127_1680821_14 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000004749 64.0
YHH3_k127_1680821_15 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000008043 55.0
YHH3_k127_1680821_16 serine threonine protein kinase - - - 0.00003424 53.0
YHH3_k127_1680821_2 NAD-dependent epimerase dehydratase K01784,K03274 - 5.1.3.2,5.1.3.20 0.000000000000000000000000000000000000000000000000000000000000000000008487 246.0
YHH3_k127_1680821_3 DUF218 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000269 225.0
YHH3_k127_1680821_4 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000002778 216.0
YHH3_k127_1680821_5 Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000009983 206.0
YHH3_k127_1680821_6 PFAM Inositol monophosphatase K01092 GO:0003674,GO:0003824,GO:0005975,GO:0006020,GO:0006066,GO:0006793,GO:0006796,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008934,GO:0009056,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0019751,GO:0023052,GO:0042578,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0046164,GO:0046174,GO:0046434,GO:0046838,GO:0046855,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052745,GO:0052834,GO:0065007,GO:0071545,GO:0071704,GO:1901575,GO:1901615,GO:1901616 3.1.3.25 0.00000000000000000000000000000000000000000000000003521 188.0
YHH3_k127_1680821_7 Bacterial trigger factor protein (TF) C-terminus K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000008645 194.0
YHH3_k127_1680821_8 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000003207 170.0
YHH3_k127_1680821_9 Peptidase, M23 - - - 0.000000000000000000000000000000000000000001813 173.0
YHH3_k127_1766273_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 353.0
YHH3_k127_1766273_1 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003369 306.0
YHH3_k127_1766273_10 - - - - 0.000000000000000000003255 104.0
YHH3_k127_1766273_11 - K07341 - - 0.00000000000000000004251 95.0
YHH3_k127_1766273_12 Excinuclease ABC C subunit domain protein K07461 - - 0.000000000000000002124 87.0
YHH3_k127_1766273_14 - - - - 0.000000000000008989 85.0
YHH3_k127_1766273_15 - - - - 0.000000000000326 73.0
YHH3_k127_1766273_16 Protein of unknown function, DUF488 - - - 0.000000000009273 75.0
YHH3_k127_1766273_18 - - - - 0.0000000001229 67.0
YHH3_k127_1766273_2 radical SAM domain protein K06871 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006094 258.0
YHH3_k127_1766273_3 Saccharopine dehydrogenase NADP binding domain K00290 - 1.5.1.7 0.0000000000000000000000000000000000000000000000000000000002838 217.0
YHH3_k127_1766273_4 Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000000000000449 170.0
YHH3_k127_1766273_5 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000002293 166.0
YHH3_k127_1766273_6 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000004091 139.0
YHH3_k127_1766273_7 Trypsin - - - 0.000000000000000000000000007753 125.0
YHH3_k127_1766273_8 Immunoglobulin-like domain of bacterial spore germination - - - 0.0000000000000000000000004006 112.0
YHH3_k127_1766273_9 TspO/MBR family K05770 - - 0.0000000000000000000000251 105.0
YHH3_k127_2280621_0 response to heat K03694,K03695 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0010033,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030312,GO:0030554,GO:0031249,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0035966,GO:0036094,GO:0040007,GO:0042221,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 - 8.587e-301 946.0
YHH3_k127_2280621_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 1.69e-231 730.0
YHH3_k127_2280621_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000003301 206.0
YHH3_k127_2280621_11 Extradiol ring-cleavage dioxygenase, class III K06990,K09141 - - 0.000000000000000000000000000000000000000000000002458 183.0
YHH3_k127_2280621_12 Glycosyl transferase WecB/TagA/CpsF family K05946 - 2.4.1.187 0.0000000000000000000000000000000000000000002197 168.0
YHH3_k127_2280621_13 PFAM Glycosyl transferase family 2 K07011,K20444 - - 0.0000000000000000000000000000000000000000002213 169.0
YHH3_k127_2280621_14 RNA methylase, SpoU family K00599 - - - 0.000000000000000000000000000000000000000001003 160.0
YHH3_k127_2280621_15 Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate K15024 - 2.3.1.8 0.000000000000000000000000000000000000000004482 161.0
YHH3_k127_2280621_16 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000879 151.0
YHH3_k127_2280621_17 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000007913 140.0
YHH3_k127_2280621_18 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000004387 133.0
YHH3_k127_2280621_19 Glycosyl transferase K13668 - 2.4.1.346 0.00000000000000000000000000000005643 138.0
YHH3_k127_2280621_2 glutamate-tRNA ligase activity K01885,K09698 - 6.1.1.17,6.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003637 484.0
YHH3_k127_2280621_20 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000001797 128.0
YHH3_k127_2280621_21 Peptidase, M23 K21471 - - 0.0000000000000000000000000000002176 138.0
YHH3_k127_2280621_22 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000002289 139.0
YHH3_k127_2280621_23 Glycosyl transferase family 2 - - - 0.0000000000000000000000000001048 124.0
YHH3_k127_2280621_24 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000001643 118.0
YHH3_k127_2280621_25 Ribosomal protein L17 K02879 - - 0.000000000000000000000000105 109.0
YHH3_k127_2280621_26 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000005376 107.0
YHH3_k127_2280621_27 Domain of unknown function (DUF389) - - - 0.00000000000000000000001557 109.0
YHH3_k127_2280621_28 hydrolase, family 25 - - - 0.00000000000000000000003446 114.0
YHH3_k127_2280621_29 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000838 96.0
YHH3_k127_2280621_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K00557 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016740,GO:0016741,GO:0030488,GO:0030696,GO:0030697,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001602 290.0
YHH3_k127_2280621_30 - - - - 0.000000000000002731 81.0
YHH3_k127_2280621_31 Polysaccharide biosynthesis protein - - - 0.00000000000001018 87.0
YHH3_k127_2280621_32 phosphatidylinositol kinase activity - - - 0.0000000000009921 81.0
YHH3_k127_2280621_33 Phosphatidylinositol - - - 0.000000000001203 81.0
YHH3_k127_2280621_34 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000002308 66.0
YHH3_k127_2280621_35 two-component response regulator K14491 GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464 - 0.00000004219 60.0
YHH3_k127_2280621_36 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000001653 61.0
YHH3_k127_2280621_38 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0004291 52.0
YHH3_k127_2280621_39 Belongs to the peptidase S8 family - - - 0.0005676 52.0
YHH3_k127_2280621_4 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000001985 265.0
YHH3_k127_2280621_5 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000003742 231.0
YHH3_k127_2280621_6 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000029 230.0
YHH3_k127_2280621_7 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000002873 234.0
YHH3_k127_2280621_8 YibE/F-like protein - - - 0.000000000000000000000000000000000000000000000000000000000002182 222.0
YHH3_k127_2280621_9 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000002203 218.0
YHH3_k127_2527669_0 DNA polymerase K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 3.264e-259 840.0
YHH3_k127_2527669_1 Belongs to the ClpA ClpB family K03696 - - 3.413e-209 677.0
YHH3_k127_2527669_10 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840 - 5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 302.0
YHH3_k127_2527669_11 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004168 285.0
YHH3_k127_2527669_12 Isopentenyl transferase K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000008121 250.0
YHH3_k127_2527669_13 zinc metalloprotease K04771,K11749,K16922 GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016021,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0040007,GO:0043170,GO:0043856,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0045152,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:0140110,GO:1901564,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000009357 235.0
YHH3_k127_2527669_14 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000001114 217.0
YHH3_k127_2527669_15 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000008223 208.0
YHH3_k127_2527669_16 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000001072 161.0
YHH3_k127_2527669_17 Dihydrofolate reductase K00287 - 1.5.1.3 0.0000000000000000000000000000000000158 141.0
YHH3_k127_2527669_18 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.00000000000000000000000000001235 123.0
YHH3_k127_2527669_19 thioredoxin domain - - - 0.0000000000000000000000000000453 124.0
YHH3_k127_2527669_2 tRNA synthetase class II core domain (G, H, P, S and T) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009466 562.0
YHH3_k127_2527669_20 competence protein - - - 0.00000000000000000000000003815 117.0
YHH3_k127_2527669_21 Domain of unknown function (DUF4844) - - - 0.0000000000000003898 82.0
YHH3_k127_2527669_23 ribosomal protein - - - 0.0000000002171 64.0
YHH3_k127_2527669_24 membrane - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000002474 61.0
YHH3_k127_2527669_25 Resolvase, N terminal domain - - - 0.0000008066 51.0
YHH3_k127_2527669_26 Phosphate acyltransferases K00655 - 2.3.1.51 0.0001471 53.0
YHH3_k127_2527669_28 MafB19-like deaminase K01493 - 3.5.4.12 0.0002925 52.0
YHH3_k127_2527669_3 Phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 537.0
YHH3_k127_2527669_4 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 503.0
YHH3_k127_2527669_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007689 431.0
YHH3_k127_2527669_6 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000088 372.0
YHH3_k127_2527669_7 AAA-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009444 370.0
YHH3_k127_2527669_8 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 321.0
YHH3_k127_2527669_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 316.0
YHH3_k127_2614851_0 Belongs to the DEAD box helicase family K05592,K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 447.0
YHH3_k127_2614851_1 to multidrug resistance ABC transporter ATP-binding protein K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002162 395.0
YHH3_k127_2614851_10 NOL1 NOP2 sun family - - - 0.00000000000000000000000000000000000000000000000000000000000008426 225.0
YHH3_k127_2614851_11 Belongs to the peptidase S8 family K01342 - 3.4.21.62 0.000000000000000000000000000000000000000000000003805 190.0
YHH3_k127_2614851_12 SelR domain K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000001509 166.0
YHH3_k127_2614851_13 Domain of unknown function (DUF1287) K09974 - - 0.000000000000000000000000000000000000000002924 162.0
YHH3_k127_2614851_14 DUF218 domain - - - 0.000000000000000000000000000000000000001227 155.0
YHH3_k127_2614851_15 cyanophycin synthetase K03802 - 6.3.2.29,6.3.2.30 0.0000000000000000000000000000000000001473 153.0
YHH3_k127_2614851_16 Peptidase C26 K01951 - 6.3.5.2 0.00000000000000000000000000000000002588 145.0
YHH3_k127_2614851_17 coenzyme F420-1:gamma-L-glutamate ligase activity - - - 0.00000000000000000000000000000000004675 139.0
YHH3_k127_2614851_18 Histidine kinase A domain protein - - - 0.00000000000000000000002702 111.0
YHH3_k127_2614851_19 - - - - 0.0000000000000000000005071 108.0
YHH3_k127_2614851_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 360.0
YHH3_k127_2614851_20 - - - - 0.0000000000000000001952 100.0
YHH3_k127_2614851_21 - - - - 0.0000000000000003374 79.0
YHH3_k127_2614851_22 phosphatidylinositol kinase activity - - - 0.000000002665 70.0
YHH3_k127_2614851_23 Protein of unknown function (DUF3298) - - - 0.00000003567 64.0
YHH3_k127_2614851_24 - - - - 0.0000598 46.0
YHH3_k127_2614851_25 Sugar (and other) transporter - - - 0.0004847 50.0
YHH3_k127_2614851_3 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 355.0
YHH3_k127_2614851_4 Suppressor of fused protein (SUFU) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006635 295.0
YHH3_k127_2614851_5 Transposase IS200 like K07491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 294.0
YHH3_k127_2614851_6 Ribosomal protein L11 methyltransferase (PrmA) K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002901 279.0
YHH3_k127_2614851_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001122 271.0
YHH3_k127_2614851_8 PFAM Peptidase M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008778 279.0
YHH3_k127_2614851_9 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000002928 244.0
YHH3_k127_2739690_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000000000000007784 104.0
YHH3_k127_2739690_1 Serine hydrolase K07002 - - 0.00000000000003148 82.0
YHH3_k127_2739690_2 Transposase - - - 0.000000002535 59.0
YHH3_k127_2886098_0 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007067 495.0
YHH3_k127_2886098_1 Heavy metal transport detoxification protein K17686 - 3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 328.0
YHH3_k127_2886098_10 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000002733 83.0
YHH3_k127_2886098_11 N-acetylmuramoyl-L-alanine amidase K01448 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.5.1.28 0.00008497 55.0
YHH3_k127_2886098_2 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000003136 279.0
YHH3_k127_2886098_3 PFAM ABC transporter related K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003929 247.0
YHH3_k127_2886098_4 MacB-like periplasmic core domain K02004 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000002515 244.0
YHH3_k127_2886098_5 MacB-like periplasmic core domain K02004 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000002382 235.0
YHH3_k127_2886098_6 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000007503 226.0
YHH3_k127_2886098_7 Belongs to the SOS response-associated peptidase family - - - 0.00000000000000000000000000000000000000000000000000624 188.0
YHH3_k127_2886098_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000000000000000002577 109.0
YHH3_k127_2886098_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000001223 86.0
YHH3_k127_3062069_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1299.0
YHH3_k127_3062069_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1187.0
YHH3_k127_3062069_10 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000591 94.0
YHH3_k127_3062069_11 Collagen triple helix repeat - - - 0.0000000000000000004262 104.0
YHH3_k127_3062069_12 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000131 75.0
YHH3_k127_3062069_13 Collagen triple helix repeat (20 copies) - - - 0.000000006135 70.0
YHH3_k127_3062069_14 domain protein K01212,K01317,K12287,K20276 - 3.2.1.65,3.4.21.10 0.000000006897 71.0
YHH3_k127_3062069_15 Protein conserved in bacteria K15539 - - 0.000000008819 65.0
YHH3_k127_3062069_2 Ftsk_gamma K03466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 501.0
YHH3_k127_3062069_3 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009292,GO:0009294,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030420,GO:0031668,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0050896,GO:0051704,GO:0051716,GO:0071496 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 451.0
YHH3_k127_3062069_4 lysyl-tRNA synthetase K04568 - - 0.000000000000000000000000000000000000000000000000000000000004559 221.0
YHH3_k127_3062069_5 Putative metal-binding motif - - - 0.0000000000000000000000000000000000000000000000000000005584 218.0
YHH3_k127_3062069_6 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000007299 172.0
YHH3_k127_3062069_7 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000001358 151.0
YHH3_k127_3062069_8 GIY-YIG catalytic domain - - - 0.0000000000000000000000000000000002806 135.0
YHH3_k127_3062069_9 cellulase activity K00226,K05349 - 1.3.98.1,3.2.1.21 0.00000000000000000000000004578 128.0
YHH3_k127_3062846_0 guanyl-nucleotide exchange factor activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008698 323.0
YHH3_k127_3062846_1 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000001441 231.0
YHH3_k127_3062846_2 Ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.000000000000000000000000000000000000000000000504 174.0
YHH3_k127_3062846_3 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000005151 150.0
YHH3_k127_3062846_4 Serine aminopeptidase, S33 K01259 - 3.4.11.5 0.000000000000000000000000000001513 138.0
YHH3_k127_3062846_5 histidine kinase HAMP region domain protein K03406 - - 0.000000000000001107 90.0
YHH3_k127_3062846_6 Pfam:DUF955 - - - 0.000000000000009948 82.0
YHH3_k127_3062846_8 - - - - 0.00005131 46.0
YHH3_k127_3171121_0 Deoxyhypusine synthase K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009435 427.0
YHH3_k127_3171121_1 acyl carrier protein K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004201 302.0
YHH3_k127_3171121_10 MazG-like family - - - 0.0000000000000000000002725 100.0
YHH3_k127_3171121_11 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000007423 96.0
YHH3_k127_3171121_13 thiamin-triphosphatase activity K05307 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0017144,GO:0019637,GO:0034641,GO:0042357,GO:0042723,GO:0043167,GO:0043169,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050333,GO:0051186,GO:0071704,GO:0072527,GO:1901360,GO:1901564 3.6.1.28 0.000000000000000007528 91.0
YHH3_k127_3171121_14 TM2 domain - - - 0.000000001409 70.0
YHH3_k127_3171121_15 WD repeat protein Lub1 K14018 GO:0000726,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006303,GO:0006325,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0006914,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0010992,GO:0016043,GO:0016236,GO:0016567,GO:0016569,GO:0016570,GO:0016574,GO:0019538,GO:0019725,GO:0019941,GO:0030163,GO:0032182,GO:0032446,GO:0033554,GO:0034517,GO:0034641,GO:0035973,GO:0036211,GO:0042592,GO:0043130,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051603,GO:0051716,GO:0061912,GO:0061919,GO:0065007,GO:0065008,GO:0070647,GO:0071704,GO:0071840,GO:0072671,GO:0090304,GO:1901360,GO:1901564,GO:1901565,GO:1901575 - 0.0000002108 63.0
YHH3_k127_3171121_16 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 - 0.00005197 56.0
YHH3_k127_3171121_17 PaaX-like protein K02616 - - 0.0001669 51.0
YHH3_k127_3171121_2 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 GO:0003674,GO:0003824,GO:0003938,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006183,GO:0006195,GO:0006204,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009125,GO:0009126,GO:0009127,GO:0009128,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009154,GO:0009156,GO:0009158,GO:0009161,GO:0009163,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009169,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009261,GO:0009987,GO:0016020,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0030312,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046037,GO:0046039,GO:0046040,GO:0046128,GO:0046129,GO:0046390,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0072523,GO:0090407,GO:0097292,GO:0097293,GO:1901068,GO:1901070,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901659 1.1.1.205 0.0000000000000000000000000000000000000000000000000000000000000000000000000000124 272.0
YHH3_k127_3171121_3 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002812 267.0
YHH3_k127_3171121_4 VanW like protein K18346 - - 0.000000000000000000000000000000000000000000000000000000000000000001721 237.0
YHH3_k127_3171121_5 Raf kinase inhibitor-like protein, YbhB YbcL family K06910 - - 0.00000000000000000000000000000000000000000000000000000002551 201.0
YHH3_k127_3171121_6 Polymer-forming cytoskeletal - - - 0.00000000000000000000000000000002263 141.0
YHH3_k127_3171121_7 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.00000000000000000000000000000483 123.0
YHH3_k127_3171121_8 MafB19-like deaminase K01487 - 3.5.4.3 0.000000000000000000000001604 108.0
YHH3_k127_3171121_9 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.000000000000000000000003018 111.0
YHH3_k127_3369915_0 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000001403 233.0
YHH3_k127_3369915_1 PFAM ABC transporter related K01995 - - 0.0000000000000000000000000000000000000000000000000000000003106 211.0
YHH3_k127_3369915_2 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000002431 201.0
YHH3_k127_3369915_3 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000001322 194.0
YHH3_k127_3369915_4 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000007761 153.0
YHH3_k127_3369915_5 - - - - 0.00000001267 61.0
YHH3_k127_3512602_0 UMP kinase activity K00947,K09903 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0030151,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000008087 220.0
YHH3_k127_3512602_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000027 209.0
YHH3_k127_3512602_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000004988 144.0
YHH3_k127_3512602_3 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000009697 130.0
YHH3_k127_3512602_4 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.00000000000000000000000001255 112.0
YHH3_k127_3512602_5 phosphatase 2C K14803,K17499 GO:0001101,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009719,GO:0009725,GO:0009737,GO:0010033,GO:0016020,GO:0033993,GO:0042221,GO:0044464,GO:0050896,GO:0071944,GO:0097305,GO:1901700 3.1.3.16 0.0000001242 63.0
YHH3_k127_3512602_6 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008855,GO:0009056,GO:0009057,GO:0009318,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575,GO:1902494 3.1.11.6 0.000002657 52.0
YHH3_k127_3625063_0 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006336 281.0
YHH3_k127_3625063_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002271 228.0
YHH3_k127_3625063_2 HEAT repeats - - - 0.0000000000000000000000000000000000000000000000000000002628 204.0
YHH3_k127_3625063_3 - - - - 0.0000000000000000000000000000000000000000000000155 180.0
YHH3_k127_3625063_4 PFAM RNA polymerase sigma factor 70, region 4 type 2 K03088 - - 0.000000000000000000000000000000000000000000334 164.0
YHH3_k127_3665717_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000903 378.0
YHH3_k127_3665717_1 transferase activity, transferring glycosyl groups K13003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006895 339.0
YHH3_k127_3665717_10 -O-antigen - - - 0.0000000000000000000003215 113.0
YHH3_k127_3665717_11 Chaperone - - - 0.0000000000001339 81.0
YHH3_k127_3665717_12 Cytochrome C biogenesis protein transmembrane region - - - 0.0000000004883 70.0
YHH3_k127_3665717_13 S-layer homology domain - - - 0.0000003513 64.0
YHH3_k127_3665717_15 Lipid A core - O-antigen ligase and K02847 - - 0.000006659 59.0
YHH3_k127_3665717_16 O-antigen polymerase - - - 0.00007832 56.0
YHH3_k127_3665717_2 sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001377 268.0
YHH3_k127_3665717_3 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000115 207.0
YHH3_k127_3665717_4 NAD-dependent epimerase dehydratase K01784,K17947 - 5.1.3.2,5.1.3.25 0.00000000000000000000000000000000000000000000000002503 190.0
YHH3_k127_3665717_5 Cytochrome C biogenesis protein - - - 0.0000000000000000000000000000000000259 149.0
YHH3_k127_3665717_6 Putative RNA methylase family UPF0020 - - - 0.0000000000000000000000000000004487 137.0
YHH3_k127_3665717_7 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000001062 136.0
YHH3_k127_3665717_8 rRNA (adenine-N6,N6-)-dimethyltransferase activity K02528,K15256 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.00000000000000000000000009952 114.0
YHH3_k127_3665717_9 -O-antigen - - - 0.000000000000000000000001406 121.0
YHH3_k127_3865598_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005216 332.0
YHH3_k127_3865598_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002244 250.0
YHH3_k127_3865598_2 Parallel beta-helix repeats - - - 0.000000000000000000000002072 123.0
YHH3_k127_3865598_3 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000001437 103.0
YHH3_k127_3865598_4 Prokaryotic diacylglycerol kinase K00887,K00901 - 2.7.1.107,2.7.1.66 0.000000000000000000004037 96.0
YHH3_k127_3865598_5 Domain of unknown function (DUF4215) - - - 0.0000000000001072 88.0
YHH3_k127_3865598_6 this gene contains a nucleotide ambiguity which may be the result of a sequencing error - - - 0.0000000000002602 79.0
YHH3_k127_3865598_7 this gene contains a nucleotide ambiguity which may be the result of a sequencing error - - - 0.000000000001811 78.0
YHH3_k127_3865598_8 - - - - 0.000002953 59.0
YHH3_k127_3972573_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 7.152e-222 707.0
YHH3_k127_3972573_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005686 547.0
YHH3_k127_3972573_10 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000231 242.0
YHH3_k127_3972573_11 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000007086 235.0
YHH3_k127_3972573_12 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000008081 244.0
YHH3_k127_3972573_13 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000002935 239.0
YHH3_k127_3972573_14 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000003769 218.0
YHH3_k127_3972573_15 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000000000000000000000000000000000000006958 192.0
YHH3_k127_3972573_16 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.00000000000000000000000000000000000000000000004564 183.0
YHH3_k127_3972573_17 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000001595 174.0
YHH3_k127_3972573_18 Protein of unknown function (DUF3048) C-terminal domain - - - 0.00000000000000000000000000000000000000000002234 177.0
YHH3_k127_3972573_19 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000002183 135.0
YHH3_k127_3972573_2 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007881 542.0
YHH3_k127_3972573_20 Metallophosphoesterase K07098 - - 0.000000000000000000000000000004629 130.0
YHH3_k127_3972573_21 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000002737 120.0
YHH3_k127_3972573_22 50S ribosomal protein L31 K02909 - - 0.00000000000000000002657 95.0
YHH3_k127_3972573_23 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.0000000000000002745 87.0
YHH3_k127_3972573_24 phosphoesterase RecJ domain protein - - - 0.00000000000000568 87.0
YHH3_k127_3972573_25 SNARE associated Golgi protein K19302 - 3.6.1.27 0.000000000000122 77.0
YHH3_k127_3972573_26 nuclear chromosome segregation - - - 0.00000004357 63.0
YHH3_k127_3972573_27 Belongs to the Nudix hydrolase family - - - 0.000002125 55.0
YHH3_k127_3972573_28 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000002935 51.0
YHH3_k127_3972573_29 DNA mismatch repair protein MutT K01515 - 3.6.1.13 0.00004585 53.0
YHH3_k127_3972573_3 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 440.0
YHH3_k127_3972573_4 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005599 366.0
YHH3_k127_3972573_5 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 348.0
YHH3_k127_3972573_6 Belongs to the phosphoglycerate kinase family K00927,K01803 - 2.7.2.3,5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 346.0
YHH3_k127_3972573_7 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00150 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 334.0
YHH3_k127_3972573_8 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 301.0
YHH3_k127_3972573_9 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000228 240.0
YHH3_k127_4046376_0 translation elongation factor activity K02358,K15771 GO:0001666,GO:0001817,GO:0001819,GO:0002791,GO:0002793,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0008150,GO:0009274,GO:0009275,GO:0009628,GO:0009986,GO:0010035,GO:0010038,GO:0010039,GO:0010339,GO:0016020,GO:0019899,GO:0022610,GO:0030312,GO:0032677,GO:0032757,GO:0032879,GO:0032880,GO:0035375,GO:0035821,GO:0036293,GO:0040007,GO:0042221,GO:0044003,GO:0044068,GO:0044403,GO:0044406,GO:0044419,GO:0044424,GO:0044426,GO:0044444,GO:0044462,GO:0044464,GO:0044650,GO:0044651,GO:0048518,GO:0048522,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051701,GO:0051704,GO:0051817,GO:0065007,GO:0070201,GO:0070482,GO:0071944,GO:0090087,GO:1903530,GO:1903532,GO:1904951,GO:2000482,GO:2000484 - 1.539e-202 635.0
YHH3_k127_4046376_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005172 381.0
YHH3_k127_4046376_10 Heavy metal tolerance protein - - - 0.0000000000000000000000000000000000000000000000000001803 207.0
YHH3_k127_4046376_11 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000000000000000000000000000000000000000000000002037 188.0
YHH3_k127_4046376_12 Ribosomal protein L4/L1 family K02926 - - 0.0000000000000000000000000000000000000000000000000004338 192.0
YHH3_k127_4046376_13 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000003265 175.0
YHH3_k127_4046376_14 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000001254 160.0
YHH3_k127_4046376_15 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000003331 145.0
YHH3_k127_4046376_16 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000037 139.0
YHH3_k127_4046376_17 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000004055 140.0
YHH3_k127_4046376_18 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000001119 123.0
YHH3_k127_4046376_19 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000001852 119.0
YHH3_k127_4046376_2 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 332.0
YHH3_k127_4046376_20 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000003992 120.0
YHH3_k127_4046376_21 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000002242 106.0
YHH3_k127_4046376_22 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000302 95.0
YHH3_k127_4046376_23 Binds to the 23S rRNA K02876 - - 0.000000000000000000007544 97.0
YHH3_k127_4046376_24 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000009463 92.0
YHH3_k127_4046376_25 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.0000000000000000002638 94.0
YHH3_k127_4046376_26 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000002667 91.0
YHH3_k127_4046376_27 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000001707 76.0
YHH3_k127_4046376_28 Ribosomal L29 protein K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00001815 49.0
YHH3_k127_4046376_29 PaaX-like protein C-terminal domain K02616 - - 0.0005736 49.0
YHH3_k127_4046376_3 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 329.0
YHH3_k127_4046376_4 Metallopeptidase family M24 K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000002666 237.0
YHH3_k127_4046376_5 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000003316 221.0
YHH3_k127_4046376_6 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000000000000000000000000000000000000000004836 207.0
YHH3_k127_4046376_7 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000001231 203.0
YHH3_k127_4046376_8 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000003628 198.0
YHH3_k127_4046376_9 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000008446 191.0
YHH3_k127_4091338_0 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000003804 228.0
YHH3_k127_4091338_1 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000001336 185.0
YHH3_k127_4091338_2 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000003776 160.0
YHH3_k127_4091338_3 NUDIX domain - - - 0.00000002043 58.0
YHH3_k127_4311527_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 8.483e-276 878.0
YHH3_k127_4311527_1 Transketolase, pyrimidine binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 360.0
YHH3_k127_4311527_10 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000002592 119.0
YHH3_k127_4311527_12 PFAM PfkB domain protein K00852 - 2.7.1.15 0.000000000000000003063 96.0
YHH3_k127_4311527_13 Transcriptional regulator, TrmB - - - 0.0000000000000001225 89.0
YHH3_k127_4311527_14 PFAM blue (type 1) copper domain protein - - - 0.00000002587 64.0
YHH3_k127_4311527_15 transcriptional - - - 0.000002547 58.0
YHH3_k127_4311527_2 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00015 - 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003241 333.0
YHH3_k127_4311527_3 positive regulation of ATPase activity K11089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005911 334.0
YHH3_k127_4311527_4 PFAM Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000002048 254.0
YHH3_k127_4311527_6 GtrA-like protein - - - 0.00000000000000000000000000000000000000000000001895 179.0
YHH3_k127_4311527_7 ribose 5-phosphate isomerase B K01808 - 5.3.1.6 0.000000000000000000000000000000000003854 142.0
YHH3_k127_4311527_8 pfkB family carbohydrate kinase - - - 0.00000000000000000000000000000000008682 146.0
YHH3_k127_4311527_9 extracellular polysaccharide biosynthetic process K13582 - - 0.0000000000000000000000000001704 127.0
YHH3_k127_4347257_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003861 254.0
YHH3_k127_4347257_1 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000005028 233.0
YHH3_k127_4347257_2 TIGRFAM RecB family nuclease - - - 0.00000000000000000000000000000000000000000000000000006419 205.0
YHH3_k127_4347257_3 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000002666 172.0
YHH3_k127_4347257_4 HD domain - - - 0.000000000000000000000000003708 117.0
YHH3_k127_4347257_5 PFAM sigma-70 region 2 domain protein K03088 - - 0.00000000000000000001995 99.0
YHH3_k127_4347257_6 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00000000005502 68.0
YHH3_k127_4442439_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 4.811e-198 641.0
YHH3_k127_4442439_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007234 486.0
YHH3_k127_4442439_10 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000004403 176.0
YHH3_k127_4442439_11 Belongs to the peptidase S11 family K01286,K07258,K07262 GO:0000003,GO:0000270,GO:0000910,GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005623,GO:0006022,GO:0006508,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016043,GO:0016787,GO:0019538,GO:0019954,GO:0022402,GO:0022414,GO:0030203,GO:0032505,GO:0042221,GO:0042493,GO:0042597,GO:0043093,GO:0043170,GO:0044238,GO:0044464,GO:0045229,GO:0050896,GO:0051301,GO:0070011,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0140096,GO:1901135,GO:1901564 3.4.16.4 0.00000000000000000000000000000000000000000009215 172.0
YHH3_k127_4442439_12 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.0000000000000000000000000000000000000000005005 175.0
YHH3_k127_4442439_13 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000005672 117.0
YHH3_k127_4442439_14 Putative small multi-drug export protein - - - 0.00000000000000000000000003999 114.0
YHH3_k127_4442439_15 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves - - - 0.00000000000000000000000007525 115.0
YHH3_k127_4442439_16 Major Facilitator - - - 0.000000000000002903 88.0
YHH3_k127_4442439_17 T5orf172 domain - - - 0.0000000000002549 72.0
YHH3_k127_4442439_18 phosphonoacetaldehyde hydrolase activity K00817,K01560,K07025,K20866 - 2.6.1.9,3.1.3.10,3.8.1.2 0.0000000005413 68.0
YHH3_k127_4442439_19 Zn-ribbon protein possibly nucleic acid-binding - - - 0.000000001795 67.0
YHH3_k127_4442439_2 tRNA synthetases class II (D, K and N) K01893 GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005432 417.0
YHH3_k127_4442439_20 PD-(D/E)XK endonuclease - - - 0.000000008726 57.0
YHH3_k127_4442439_22 FR47-like protein K03789 - 2.3.1.128 0.0001894 49.0
YHH3_k127_4442439_3 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 378.0
YHH3_k127_4442439_4 COG1643 HrpA-like helicases K03578 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 391.0
YHH3_k127_4442439_5 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 328.0
YHH3_k127_4442439_6 PFAM CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008749 285.0
YHH3_k127_4442439_7 DNA recombination-mediator protein A K03168,K04096 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001063 286.0
YHH3_k127_4442439_8 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000002202 244.0
YHH3_k127_4442439_9 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000002332 203.0
YHH3_k127_4638677_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756,K01857 - 4.3.2.2,5.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 419.0
YHH3_k127_4638677_1 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 355.0
YHH3_k127_4638677_2 - - - - 0.0000000000000000000000000000000000002151 162.0
YHH3_k127_4638677_3 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000001579 132.0
YHH3_k127_4638677_4 deoxyhypusine monooxygenase activity K01387 - 3.4.24.3 0.0000000000000000000000000001042 134.0
YHH3_k127_4638677_5 phosphoribosylaminoimidazolesuccinocarboxamide synthase activity K01587,K01756,K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016874,GO:0016879,GO:0016881,GO:0044424,GO:0044444,GO:0044464 4.1.1.21,4.3.2.2,6.3.2.6 0.0000000000000000001294 91.0
YHH3_k127_4638677_6 Threonine aldolase K01620 - 4.1.2.48 0.0000000000000000002121 90.0
YHH3_k127_4638677_7 Transposase - - - 0.00000000000006263 83.0
YHH3_k127_4638677_8 Phosphotransferase enzyme family K17880 - 2.7.1.119 0.00000009209 64.0
YHH3_k127_4656704_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 613.0
YHH3_k127_4656704_1 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000002326 191.0
YHH3_k127_4656704_2 Haloacid dehalogenase-like hydrolase K17623 - 3.1.3.96 0.0000000000000000000000000000000000000000000002388 175.0
YHH3_k127_4656704_3 DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.000000000000000000000000001156 124.0
YHH3_k127_4656704_4 COG2165 Type II secretory pathway, pseudopilin PulG K02456 - - 0.0000000000000008049 83.0
YHH3_k127_4656704_5 cellulase activity K20276 - - 0.0000000000001142 86.0
YHH3_k127_4656704_6 Sporulation and spore germination - - - 0.000000000001699 78.0
YHH3_k127_4656704_7 Binds directly to 16S ribosomal RNA K02968 - - 0.000000009758 59.0
YHH3_k127_4656704_8 - K01406 - 3.4.24.40 0.00000003579 65.0
YHH3_k127_4656704_9 Bacterial protein of unknown function (DUF916) K00226 - 1.3.98.1 0.00003625 55.0
YHH3_k127_4733759_0 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 519.0
YHH3_k127_4733759_1 PFAM UbiA prenyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 446.0
YHH3_k127_4733759_2 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000181 254.0
YHH3_k127_4765810_0 collagenase K08303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 437.0
YHH3_k127_4765810_1 SAM-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004926 297.0
YHH3_k127_4765810_2 Belongs to the pseudouridine synthase RsuA family K06178,K06182 - 5.4.99.21,5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000003341 222.0
YHH3_k127_4765810_3 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000004184 130.0
YHH3_k127_4765810_4 Serine hydrolase K07002 - - 0.000000000000000000000000000007691 126.0
YHH3_k127_4765810_5 Pfam:DUF955 - - - 0.00000000000000001521 88.0
YHH3_k127_4765810_6 - - - - 0.0000000000004906 74.0
YHH3_k127_4765810_7 Putative metal-binding motif - - - 0.00002222 56.0
YHH3_k127_4765810_8 - - - - 0.0005911 49.0
YHH3_k127_4839055_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.334e-223 699.0
YHH3_k127_4839055_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 3.6.3.14 8.33e-210 663.0
YHH3_k127_4839055_10 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000007033 68.0
YHH3_k127_4839055_11 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.0000288 53.0
YHH3_k127_4839055_13 phosphoprotein phosphatase activity K07313 - 3.1.3.16 0.0001277 49.0
YHH3_k127_4839055_14 Photosynthesis system II assembly factor YCF48 - - - 0.0001948 53.0
YHH3_k127_4839055_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 473.0
YHH3_k127_4839055_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000000000000000000000000000000006657 241.0
YHH3_k127_4839055_4 TIGRFAM hydrolase, TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000001949 216.0
YHH3_k127_4839055_5 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000718 173.0
YHH3_k127_4839055_6 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000000003912 109.0
YHH3_k127_4839055_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000005078 79.0
YHH3_k127_4839055_8 reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000006696 77.0
YHH3_k127_4839055_9 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.000000000002171 74.0
YHH3_k127_4966472_0 DEAD DEAH box helicase K03654 - 3.6.4.12 5.084e-208 669.0
YHH3_k127_4966472_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 418.0
YHH3_k127_4966472_10 alpha-ribazole phosphatase activity K02226,K15634,K15640 - 3.1.3.73,5.4.2.12 0.0000000003377 67.0
YHH3_k127_4966472_11 - - - - 0.0000000006227 74.0
YHH3_k127_4966472_12 Transposase - - - 0.00000004255 55.0
YHH3_k127_4966472_13 BTB And C-terminal Kelch K10442 GO:0000151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005815,GO:0005829,GO:0005856,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0015630,GO:0019538,GO:0031461,GO:0031463,GO:0032991,GO:0036211,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1902494,GO:1990234 - 0.0000005094 59.0
YHH3_k127_4966472_14 protein serine/threonine phosphatase activity K01090,K20074 - 3.1.3.16 0.000004075 59.0
YHH3_k127_4966472_2 PFAM TrkA-N domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 385.0
YHH3_k127_4966472_3 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000007104 226.0
YHH3_k127_4966472_4 ABC-type Mn2 Zn2 transport system, permease component K09816,K09819,K19976 - - 0.00000000000000000000000000000000000000000000000000001774 201.0
YHH3_k127_4966472_5 COG1121 ABC-type Mn Zn transport systems ATPase component K02074 - - 0.00000000000000000000000000000000000000000000000000619 190.0
YHH3_k127_4966472_6 Belongs to the bacterial solute-binding protein 9 family K09815 - - 0.00000000000000000000000000000000000000000001307 174.0
YHH3_k127_4966472_7 Ferric uptake regulator, Fur family K03711 - - 0.00000000000000001276 87.0
YHH3_k127_4966472_8 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K03286 - - 0.000000000000001549 93.0
YHH3_k127_4966472_9 OsmC-like protein K06889,K07397 - - 0.0000000000004659 78.0
YHH3_k127_5160056_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901576 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008952 340.0
YHH3_k127_5160056_1 helicase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 344.0
YHH3_k127_5769297_0 - - - - 0.000000000000001269 83.0
YHH3_k127_5769297_1 heme binding K21472 - - 0.000000000000005804 87.0
YHH3_k127_5769297_2 metallocarboxypeptidase activity K14054 GO:0000270,GO:0003674,GO:0003824,GO:0004040,GO:0004180,GO:0004181,GO:0005488,GO:0006022,GO:0006026,GO:0006027,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008270,GO:0009050,GO:0009056,GO:0009057,GO:0009253,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019538,GO:0030203,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0046872,GO:0046914,GO:0061473,GO:0070011,GO:0071704,GO:0140096,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000006126 85.0
YHH3_k127_5769297_3 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000002068 82.0
YHH3_k127_5872004_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 614.0
YHH3_k127_5872004_1 Cell cycle protein K03588 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005062 326.0
YHH3_k127_5872004_10 Type IV pilus assembly protein PilM K02662 - - 0.000000000000001372 89.0
YHH3_k127_5872004_11 Translin family - - - 0.00000009073 61.0
YHH3_k127_5872004_12 Prokaryotic N-terminal methylation motif - - - 0.000004593 55.0
YHH3_k127_5872004_13 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.000005201 55.0
YHH3_k127_5872004_14 NUDIX hydrolase K03574 - 3.6.1.55 0.0001465 50.0
YHH3_k127_5872004_15 Development and cell death domain K10442,K10443,K10446,K10450,K10457 GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005856,GO:0008150,GO:0008582,GO:0040008,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044087,GO:0044424,GO:0044464,GO:0045886,GO:0045926,GO:0048519,GO:0048523,GO:0048638,GO:0048640,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0051093,GO:0051128,GO:0051129,GO:0051239,GO:0051241,GO:0051960,GO:0051961,GO:0051963,GO:0051964,GO:0065007,GO:0065008,GO:1904396,GO:1904397,GO:1905809,GO:2000026 - 0.0001884 53.0
YHH3_k127_5872004_2 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 299.0
YHH3_k127_5872004_3 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000005442 248.0
YHH3_k127_5872004_4 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000136 214.0
YHH3_k127_5872004_5 peptidase K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000001263 169.0
YHH3_k127_5872004_6 Ribonuclease H K03469 - 3.1.26.4 0.00000000000000000000000000000000001249 140.0
YHH3_k127_5872004_7 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.0000000000000000000002097 99.0
YHH3_k127_5872004_9 PFAM nitrogen-fixing NifU domain protein - - - 0.00000000000000004616 83.0
YHH3_k127_620573_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 2.279e-203 658.0
YHH3_k127_620573_1 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 525.0
YHH3_k127_620573_10 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000003669 181.0
YHH3_k127_620573_11 recombinase XerD K04763 - - 0.00000000000000000000000000000000000000000000001266 183.0
YHH3_k127_620573_12 NYN domain - - - 0.0000000000000000000000000000000000000000003684 167.0
YHH3_k127_620573_13 slime layer polysaccharide biosynthetic process K16710 - - 0.00000000000000000000000000000000000000004932 168.0
YHH3_k127_620573_14 Sulfotransferase - - - 0.0000000000000000000000000000000000000001099 162.0
YHH3_k127_620573_15 Sulfotransferase domain - - - 0.0000000000000000000000000000000000000007712 159.0
YHH3_k127_620573_16 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000002544 153.0
YHH3_k127_620573_17 von Willebrand factor, type A - - - 0.0000000000000000000000000000000176 127.0
YHH3_k127_620573_18 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000106 126.0
YHH3_k127_620573_19 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000001911 102.0
YHH3_k127_620573_2 PFAM magnesium chelatase ChlI subunit K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 530.0
YHH3_k127_620573_20 uridine kinase K00876 - 2.7.1.48 0.0000000000000000005914 94.0
YHH3_k127_620573_21 glycoside hydrolase, family - - - 0.000000000000001291 91.0
YHH3_k127_620573_22 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 - - 0.00000000000002569 77.0
YHH3_k127_620573_23 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000006324 66.0
YHH3_k127_620573_24 glycosyl transferase family 2 K20444 - - 0.00000002374 68.0
YHH3_k127_620573_25 O-Antigen ligase - - - 0.0000002429 64.0
YHH3_k127_620573_26 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.00009255 51.0
YHH3_k127_620573_27 - - - - 0.0001651 44.0
YHH3_k127_620573_3 SPFH domain-Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002074 285.0
YHH3_k127_620573_4 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 - 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000001657 246.0
YHH3_k127_620573_5 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.00000000000000000000000000000000000000000000000000000000000008942 217.0
YHH3_k127_620573_6 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000002712 213.0
YHH3_k127_620573_7 orotate phosphoribosyltransferase activity K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000003876 212.0
YHH3_k127_620573_8 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000001807 205.0
YHH3_k127_620573_9 NUDIX domain K18447 - 3.6.1.21 0.000000000000000000000000000000000000000000000000116 186.0
YHH3_k127_6522385_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 2.76e-312 979.0
YHH3_k127_6522385_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 2.237e-257 811.0
YHH3_k127_6522385_10 PFAM Capsule synthesis protein, CapA K07282 - - 0.000000000000000000000000000000000000000000009174 183.0
YHH3_k127_6522385_11 Belongs to the MraZ family K03925 - - 0.0000000000000000000000000000000000000000007028 165.0
YHH3_k127_6522385_12 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.0000000000000000000000000000000000000003426 165.0
YHH3_k127_6522385_13 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000003802 141.0
YHH3_k127_6522385_14 PFAM Methyltransferase K15256 - - 0.00000000000000000000000000000005999 134.0
YHH3_k127_6522385_15 cytidyltransferase-related domain K00952 - 2.7.7.1 0.00000000000000000000000008212 113.0
YHH3_k127_6522385_16 Sigma-70, region 4 - - - 0.0000000000000000000001225 106.0
YHH3_k127_6522385_17 Patatin-like phospholipase - - - 0.0000000000002766 79.0
YHH3_k127_6522385_18 BNR Asp-box repeat domain - - - 0.00000973 57.0
YHH3_k127_6522385_2 Large extracellular alpha-helical protein K06894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005467 659.0
YHH3_k127_6522385_3 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03696 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 440.0
YHH3_k127_6522385_4 PFAM phosphoesterase, RecJ domain protein K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 390.0
YHH3_k127_6522385_5 queuine tRNA-ribosyltransferase activity K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 348.0
YHH3_k127_6522385_6 Transposase IS200 like K07491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 299.0
YHH3_k127_6522385_7 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003707 282.0
YHH3_k127_6522385_8 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000001613 247.0
YHH3_k127_6522385_9 Zn peptidase - - - 0.000000000000000000000000000000000000000000000000005685 197.0
YHH3_k127_6531533_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004157 410.0
YHH3_k127_6531533_1 Protein of unknown function (DUF3179) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000254 280.0
YHH3_k127_6531533_2 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000001874 248.0
YHH3_k127_6531533_3 rRNA processing K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000006366 215.0
YHH3_k127_6531533_4 nUDIX hydrolase K08312 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019144,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872 - 0.00000000000000000000000000003485 123.0
YHH3_k127_6531533_5 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676,K06191 - - 0.000000000000000000000468 97.0
YHH3_k127_6531533_6 23S rRNA-intervening sequence protein - - - 0.000007952 49.0
YHH3_k127_6531533_7 - - - - 0.0002281 47.0
YHH3_k127_6531533_8 von Willebrand factor (vWF) type A domain K07114 - - 0.0004185 47.0
YHH3_k127_658228_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003878 489.0
YHH3_k127_658228_1 ABC transporter, transmembrane region K06147,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 302.0
YHH3_k127_658228_10 Sortase family K07284 - 3.4.22.70 0.00000000004341 72.0
YHH3_k127_658228_11 3-demethylubiquinone-9 3-O-methyltransferase activity K13611,K13612,K13613,K15675,K15676,K18827 - 2.1.1.294,2.7.1.181 0.0000000004471 70.0
YHH3_k127_658228_12 von Willebrand factor (vWF) type A domain - - - 0.00000004901 67.0
YHH3_k127_658228_13 YecM protein K09907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000004691 55.0
YHH3_k127_658228_14 selenocysteine incorporation K10837 GO:0000049,GO:0001514,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006417,GO:0006451,GO:0006518,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019222,GO:0019538,GO:0031323,GO:0031326,GO:0032268,GO:0034248,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0097159,GO:0098620,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 2.7.1.164 0.000026 53.0
YHH3_k127_658228_15 Sugar-specific transcriptional regulator TrmB - - - 0.0001828 53.0
YHH3_k127_658228_2 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - 0.00000000000000000000000000000000000000000000000000000000000001811 226.0
YHH3_k127_658228_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000003762 166.0
YHH3_k127_658228_4 Cupin domain - - - 0.00000000000000000000000000000000000000002847 155.0
YHH3_k127_658228_5 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000000000000000000000000000000000008503 154.0
YHH3_k127_658228_6 RNA-binding protein - - - 0.0000000000000000000000001425 108.0
YHH3_k127_658228_7 chlorophyll binding - - - 0.0000000000001623 82.0
YHH3_k127_658228_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000002259 83.0
YHH3_k127_658228_9 Cytochrome B5 - - - 0.00000000001428 73.0
YHH3_k127_6676654_0 PFAM Type I restriction enzyme R protein N terminus (HSDR_N) K01153 - 3.1.21.3 4.536e-321 1000.0
YHH3_k127_6676654_1 N-6 DNA Methylase K03427 - 2.1.1.72 1.653e-261 837.0
YHH3_k127_6676654_10 DNA methylase - - - 0.0000000000000000000000000000000000000000000000000000000000000004117 235.0
YHH3_k127_6676654_11 DNA methylase - - - 0.00000000000000000000000000000000000000000000000003076 188.0
YHH3_k127_6676654_12 Membrane K08984 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000004601 181.0
YHH3_k127_6676654_13 DNA alkylation repair enzyme - - - 0.00000000000000000000000000000000000000000000001847 179.0
YHH3_k127_6676654_14 - - - - 0.0000000000000000000000000000000000000000004205 166.0
YHH3_k127_6676654_15 TIGRFAM Phage - - - 0.00000000000000000000000000000001092 145.0
YHH3_k127_6676654_16 Domain of unknown function (DUF4173) - - - 0.0000000000000000000000000000001985 141.0
YHH3_k127_6676654_17 - - - - 0.00000000000000000000000000006386 123.0
YHH3_k127_6676654_18 D-alanyl-D-alanine carboxypeptidase K07262 GO:0000003,GO:0000270,GO:0000910,GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005623,GO:0006022,GO:0006508,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016043,GO:0016787,GO:0019538,GO:0019954,GO:0022402,GO:0022414,GO:0030203,GO:0032505,GO:0042221,GO:0042493,GO:0042597,GO:0043093,GO:0043170,GO:0044238,GO:0044464,GO:0045229,GO:0050896,GO:0051301,GO:0070011,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0140096,GO:1901135,GO:1901564 - 0.0000000000000000000000004204 117.0
YHH3_k127_6676654_19 Bacterial extracellular solute-binding protein K02027 - - 0.000000000000000000000003693 117.0
YHH3_k127_6676654_2 DNA polymerase X family K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 545.0
YHH3_k127_6676654_20 O-Antigen ligase - - - 0.000000000000000000001923 108.0
YHH3_k127_6676654_21 GDP-mannose mannosyl hydrolase activity - - - 0.0000000000000000005586 92.0
YHH3_k127_6676654_22 HNH nucleases - - - 0.00000000000000001548 85.0
YHH3_k127_6676654_23 TIR domain - - - 0.00000000000000007566 91.0
YHH3_k127_6676654_24 Polysaccharide biosynthesis protein - - - 0.0000000000000002423 92.0
YHH3_k127_6676654_25 Lamin Tail Domain - - - 0.0000000000000005111 94.0
YHH3_k127_6676654_27 - - - - 0.0000000000000009893 78.0
YHH3_k127_6676654_28 stage II sporulation protein K06381 - - 0.00000000000004618 86.0
YHH3_k127_6676654_29 Belongs to the peptidase S8 family - - - 0.00000000001355 79.0
YHH3_k127_6676654_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007468 422.0
YHH3_k127_6676654_30 nuclear chromosome segregation - - - 0.0000000003141 66.0
YHH3_k127_6676654_31 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000001686 66.0
YHH3_k127_6676654_32 Bacterial PH domain - - - 0.000000004019 66.0
YHH3_k127_6676654_35 - - - - 0.000302 48.0
YHH3_k127_6676654_36 - - - - 0.0004736 48.0
YHH3_k127_6676654_4 Domain of unknown function(DUF2779) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002755 379.0
YHH3_k127_6676654_5 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 370.0
YHH3_k127_6676654_6 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006973 305.0
YHH3_k127_6676654_7 endonuclease activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000141 287.0
YHH3_k127_6676654_8 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate - - - 0.00000000000000000000000000000000000000000000000000000000000000004242 227.0
YHH3_k127_6676654_9 recombinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000005512 241.0
YHH3_k127_6713886_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 GO:0008150,GO:0040007 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004109 561.0
YHH3_k127_6713886_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 351.0
YHH3_k127_6713886_10 Transcriptional regulator, TrmB - - - 0.00000000000000000000000000000000000000000000000002451 188.0
YHH3_k127_6713886_11 - - - - 0.000000000000000000000000000000000000000000000001469 180.0
YHH3_k127_6713886_12 Sodium/hydrogen exchanger family K03499 - - 0.000000000000000000000000000000000000000000000003297 187.0
YHH3_k127_6713886_13 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000007946 173.0
YHH3_k127_6713886_14 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000001099 174.0
YHH3_k127_6713886_15 COG1651 Protein-disulfide isomerase - - - 0.0000000000000000000000000002347 129.0
YHH3_k127_6713886_16 Phosphoribulokinase / Uridine kinase family K00876 - 2.7.1.48 0.00000000000000000000000000263 127.0
YHH3_k127_6713886_17 FAD binding domain - - - 0.000000000000000000000000008325 125.0
YHH3_k127_6713886_18 Transcription elongation factor, N-terminal K03624 - - 0.00000000000000000001044 100.0
YHH3_k127_6713886_19 Protein of unknown function (DUF541) K09807 - - 0.00000000000000000003926 100.0
YHH3_k127_6713886_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 347.0
YHH3_k127_6713886_20 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit - - - 0.000000000000000000462 94.0
YHH3_k127_6713886_21 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000001773 77.0
YHH3_k127_6713886_22 - - - - 0.0000000000001232 73.0
YHH3_k127_6713886_23 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.0000000007509 70.0
YHH3_k127_6713886_24 peptidase C14 caspase catalytic subunit p20 - - - 0.000000001124 66.0
YHH3_k127_6713886_25 serine-type endopeptidase activity K04772,K08372 - - 0.000000001551 70.0
YHH3_k127_6713886_26 COG0433 Predicted ATPase - - - 0.000000005354 66.0
YHH3_k127_6713886_27 Belongs to the 5'(3')-deoxyribonucleotidase family K05967 - - 0.0000002848 59.0
YHH3_k127_6713886_28 - - - - 0.0000004982 60.0
YHH3_k127_6713886_29 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00005475 52.0
YHH3_k127_6713886_3 Sodium/calcium exchanger protein K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005318 312.0
YHH3_k127_6713886_4 Nickel-dependent hydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001703 284.0
YHH3_k127_6713886_5 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity K11540 GO:0000050,GO:0000052,GO:0000166,GO:0001882,GO:0001884,GO:0002134,GO:0003674,GO:0003824,GO:0004070,GO:0004087,GO:0004088,GO:0004151,GO:0004672,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006082,GO:0006139,GO:0006206,GO:0006207,GO:0006213,GO:0006220,GO:0006221,GO:0006228,GO:0006464,GO:0006468,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009605,GO:0009719,GO:0009725,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0016053,GO:0016301,GO:0016310,GO:0016363,GO:0016597,GO:0016740,GO:0016741,GO:0016743,GO:0016772,GO:0016773,GO:0016787,GO:0016810,GO:0016812,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0017144,GO:0018107,GO:0018130,GO:0018193,GO:0018210,GO:0019103,GO:0019240,GO:0019438,GO:0019538,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0019899,GO:0030424,GO:0030554,GO:0031406,GO:0031667,GO:0031974,GO:0031981,GO:0032549,GO:0032551,GO:0032553,GO:0032555,GO:0032557,GO:0032559,GO:0032868,GO:0032991,GO:0033267,GO:0034399,GO:0034404,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0036211,GO:0036477,GO:0042221,GO:0042455,GO:0042594,GO:0042802,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043195,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043434,GO:0043436,GO:0043603,GO:0043604,GO:0043679,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045202,GO:0046051,GO:0046112,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046394,GO:0046483,GO:0046777,GO:0046872,GO:0046914,GO:0050896,GO:0055086,GO:0070013,GO:0070335,GO:0070406,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:0097458,GO:0098793,GO:0120025,GO:0120038,GO:0140096,GO:0150034,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901652,GO:1901657,GO:1901659,GO:1901698,GO:1901700 2.1.3.2,3.5.2.3,6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000001835 227.0
YHH3_k127_6713886_6 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000002943 231.0
YHH3_k127_6713886_7 - - - - 0.0000000000000000000000000000000000000000000000000000000007641 209.0
YHH3_k127_6713886_8 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K09765 - 1.17.99.6 0.000000000000000000000000000000000000000000000000004584 187.0
YHH3_k127_6713886_9 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 GO:0003674,GO:0003824,GO:0004151,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.5.2.3 0.00000000000000000000000000000000000000000000000001654 193.0
YHH3_k127_7304122_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1123.0
YHH3_k127_7304122_1 DEAD DEAH box helicase domain protein K06877 - - 0.0000000000000000000000000000000000000988 150.0
YHH3_k127_7304122_2 RNA cap guanine-N2 methyltransferase - - - 0.0000000000000000008779 90.0
YHH3_k127_7321028_0 PFAM tRNA synthetase class II (G H P and S) K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008098 474.0
YHH3_k127_7321028_1 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004887 380.0
YHH3_k127_7321028_10 Involved in formation and maintenance of cell shape K03570 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007163,GO:0008150,GO:0008360,GO:0009987,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0043621,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944,GO:0071963 - 0.0000000001016 70.0
YHH3_k127_7321028_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 362.0
YHH3_k127_7321028_3 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 325.0
YHH3_k127_7321028_4 Belongs to the GPI family K01810 - 5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 320.0
YHH3_k127_7321028_5 Phosphoribosyl transferase domain K07100 - - 0.0000000000000000000000000000000000000000000000000000000681 201.0
YHH3_k127_7321028_6 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000054 158.0
YHH3_k127_7321028_7 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides - - - 0.00000000000000000000000000000000009187 138.0
YHH3_k127_7321028_8 Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme K14656 - 2.7.7.2 0.00000000000000006197 85.0
YHH3_k127_7321028_9 NUDIX domain K03574 - 3.6.1.55 0.0000000000000007282 83.0
YHH3_k127_7356210_0 PFAM glycosyl transferase, family 51 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006011 493.0
YHH3_k127_7356210_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003693 425.0
YHH3_k127_7356210_2 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000007372 235.0
YHH3_k127_7356210_3 membrane protein (DUF2207) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000003696 233.0
YHH3_k127_7356210_4 2 iron, 2 sulfur cluster binding K04488,K07755,K13819 - 2.1.1.137 0.0000000000000000000000000000000000000000000000004001 183.0
YHH3_k127_7356210_5 Transcriptional regulator - - - 0.00000000000000001332 88.0
YHH3_k127_7356210_6 3D domain protein - - - 0.000000000000007212 81.0
YHH3_k127_7356210_7 cellular manganese ion homeostasis - - - 0.00000000000004493 79.0
YHH3_k127_7356210_8 DnaJ-class molecular chaperone with C-terminal Zn finger domain - - - 0.00001622 51.0
YHH3_k127_7736262_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1064.0
YHH3_k127_7736262_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 1.153e-228 737.0
YHH3_k127_7736262_10 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009986 346.0
YHH3_k127_7736262_11 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 344.0
YHH3_k127_7736262_12 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004139 322.0
YHH3_k127_7736262_13 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007439 321.0
YHH3_k127_7736262_14 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 306.0
YHH3_k127_7736262_15 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 293.0
YHH3_k127_7736262_16 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 303.0
YHH3_k127_7736262_17 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001474 298.0
YHH3_k127_7736262_18 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000185 248.0
YHH3_k127_7736262_19 PFAM sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005542 258.0
YHH3_k127_7736262_2 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 1.131e-220 696.0
YHH3_k127_7736262_20 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000004353 219.0
YHH3_k127_7736262_21 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000007459 198.0
YHH3_k127_7736262_22 Transposase IS200 like - - - 0.00000000000000000000000000000000000000000000000009981 186.0
YHH3_k127_7736262_23 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000005118 190.0
YHH3_k127_7736262_24 Mechanosensitive ion channel K03442 - - 0.00000000000000000000000000000000000000000000076 179.0
YHH3_k127_7736262_25 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.00000000000000000000000000000000000001298 154.0
YHH3_k127_7736262_26 Thioredoxin - - - 0.0000000000000000000000000000000000008891 148.0
YHH3_k127_7736262_27 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000002822 144.0
YHH3_k127_7736262_28 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000003163 152.0
YHH3_k127_7736262_29 Membrane protein insertase, YidC Oxa1 family K03217 - - 0.000000000000000000000000000000398 133.0
YHH3_k127_7736262_3 DNA methylase K07316 - 2.1.1.72 1.891e-201 638.0
YHH3_k127_7736262_30 tRNA nucleotidyltransferase poly(A) polymerase K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000003382 136.0
YHH3_k127_7736262_31 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000385 121.0
YHH3_k127_7736262_32 Transposase K07491 - - 0.00000000000000000000000000004941 125.0
YHH3_k127_7736262_33 Belongs to the SUA5 family K07566 - 2.7.7.87 0.0000000000000000000000000001078 123.0
YHH3_k127_7736262_34 Protein of unknown function (DUF4012) - - - 0.00000000000000000000004291 116.0
YHH3_k127_7736262_35 23S rRNA-intervening sequence protein - - - 0.0000000000000000000001795 102.0
YHH3_k127_7736262_36 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.0000000000000000000002137 103.0
YHH3_k127_7736262_37 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000007317 98.0
YHH3_k127_7736262_38 Zinc finger domain - - - 0.0000000000000000000007727 108.0
YHH3_k127_7736262_39 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000002581 97.0
YHH3_k127_7736262_4 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009163 453.0
YHH3_k127_7736262_40 DHH family K06881 - 3.1.13.3,3.1.3.7 0.00000000000000001553 95.0
YHH3_k127_7736262_42 NUDIX domain K03574 - 3.6.1.55 0.000000000000008255 85.0
YHH3_k127_7736262_43 Tellurite resistance protein TehB - - - 0.00000000000001198 82.0
YHH3_k127_7736262_44 response to antibiotic - - - 0.0000000000001908 75.0
YHH3_k127_7736262_45 PFAM ubiE COQ5 methyltransferase family - - - 0.000000000008609 72.0
YHH3_k127_7736262_46 sequence-specific DNA binding - - - 0.00000000001717 67.0
YHH3_k127_7736262_47 Nucleotidyltransferase domain - - - 0.00000000004014 74.0
YHH3_k127_7736262_48 Preprotein translocase SecG subunit K03075 - - 0.00000000006736 65.0
YHH3_k127_7736262_49 Tetratricopeptide repeat - - - 0.0000000004881 73.0
YHH3_k127_7736262_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 407.0
YHH3_k127_7736262_50 Diacylglycerol kinase catalytic domain (presumed) - - - 0.000000001436 68.0
YHH3_k127_7736262_51 peptidase M23 - - - 0.00000001047 69.0
YHH3_k127_7736262_52 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000001421 61.0
YHH3_k127_7736262_53 Belongs to the peptidase S8 family K02674 - - 0.0000003793 64.0
YHH3_k127_7736262_54 PFAM O-antigen polymerase K18814 - - 0.000003036 59.0
YHH3_k127_7736262_55 PD-(D/E)XK nuclease superfamily - - - 0.00008456 46.0
YHH3_k127_7736262_56 Belongs to the peptidase S8 family - - - 0.0002018 52.0
YHH3_k127_7736262_57 PD-(D/E)XK nuclease superfamily - - - 0.0008996 43.0
YHH3_k127_7736262_6 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007994 378.0
YHH3_k127_7736262_7 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 370.0
YHH3_k127_7736262_8 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 363.0
YHH3_k127_7736262_9 type iii restriction K01156 - 3.1.21.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000043 375.0
YHH3_k127_7834173_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000001218 232.0
YHH3_k127_7834173_1 Source PGD - - - 0.000000000000000000000000000000000000000000006954 175.0
YHH3_k127_7834173_10 FG-GAP repeat - - - 0.000000006488 68.0
YHH3_k127_7834173_11 Protein of unknown function (DUF2647) - - - 0.000000382 52.0
YHH3_k127_7834173_12 - - - - 0.0000005619 53.0
YHH3_k127_7834173_13 - - - - 0.000007517 48.0
YHH3_k127_7834173_14 - - - - 0.00007774 45.0
YHH3_k127_7834173_2 MgtC family K07507 - - 0.00000000000000000000000000003941 122.0
YHH3_k127_7834173_3 - - - - 0.00000000000000000001932 92.0
YHH3_k127_7834173_4 - - - - 0.000000000000000000107 92.0
YHH3_k127_7834173_5 Belongs to the UPF0109 family K06960 - - 0.000000000000000633 81.0
YHH3_k127_7834173_6 - - - - 0.000000000000001863 82.0
YHH3_k127_7834173_7 - - - - 0.000000000000156 75.0
YHH3_k127_7834173_8 - - - - 0.0000000002913 61.0
YHH3_k127_7834173_9 - - - - 0.000000003439 68.0
YHH3_k127_7938213_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 523.0
YHH3_k127_7938213_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004717 302.0
YHH3_k127_7938213_2 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000000000000004633 137.0
YHH3_k127_7938213_3 Binds to the 23S rRNA K02939 - - 0.0000000000000000000000000005418 118.0
YHH3_k127_7938213_4 NUDIX domain - - - 0.0000000000000000001997 94.0
YHH3_k127_7938213_5 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000007055 76.0
YHH3_k127_7938213_6 Etoposide-induced protein 2.4 (EI24) K06203 - - 0.00000000007517 72.0
YHH3_k127_7959657_0 TIGRFAM RecB family nuclease - - - 0.000000000000000000000000000000000000000000000000000000000005594 225.0
YHH3_k127_7959657_1 23S rRNA-intervening sequence protein - - - 0.0000000000000000000003934 99.0
YHH3_k127_8001475_0 Glucose-6-phosphate dehydrogenase, NAD binding domain K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 288.0
YHH3_k127_8001475_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 293.0
YHH3_k127_8001475_2 FtsZ-dependent cytokinesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003022 285.0
YHH3_k127_8001475_3 6-phosphogluconolactonase K01057 - 3.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002596 277.0
YHH3_k127_8001475_4 Ompa motb domain protein K02557 - - 0.00000000000000000000000000000000000000000000003472 181.0
YHH3_k127_8001475_5 response to abiotic stimulus K01011,K06867 - 2.8.1.1,2.8.1.2 0.00000000000000003924 87.0
YHH3_k127_8029897_0 Heat shock 70 kDa protein K04043 - - 2.571e-250 788.0
YHH3_k127_8029897_1 cysteine-tRNA ligase activity K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004747 539.0
YHH3_k127_8029897_10 NYN domain - - - 0.0000000000001566 77.0
YHH3_k127_8029897_11 PFAM von Willebrand factor type A - - - 0.000002185 60.0
YHH3_k127_8029897_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 351.0
YHH3_k127_8029897_3 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000001472 121.0
YHH3_k127_8029897_4 Aminoacyl-tRNA editing domain K09759 - 6.1.1.23 0.000000000000000000000001433 112.0
YHH3_k127_8029897_5 DHHA2 K15986 - 3.6.1.1 0.00000000000000000008654 100.0
YHH3_k127_8029897_6 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000009988 95.0
YHH3_k127_8029897_7 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000002848 87.0
YHH3_k127_8029897_8 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000001879 85.0
YHH3_k127_8029897_9 Protein of unknown function (DUF3467) - - - 0.000000000000000633 81.0
YHH3_k127_8035407_0 DNA helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 428.0
YHH3_k127_8035407_1 spermidine synthase activity K00797 GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006049 417.0
YHH3_k127_8035407_2 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000001955 189.0
YHH3_k127_8035407_5 AAA domain K01939 - 6.3.4.4 0.00000000000000000003811 98.0
YHH3_k127_8035407_6 L,D-transpeptidase catalytic domain - - - 0.000000000000000002583 98.0
YHH3_k127_8035407_7 - - - - 0.0000006191 61.0
YHH3_k127_8035407_8 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.0000585 47.0
YHH3_k127_8035407_9 Cupin - - - 0.0004854 50.0
YHH3_k127_8090523_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 465.0
YHH3_k127_8090523_1 Belongs to the MurCDEF family K01924 GO:0000166,GO:0000270,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008763,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034645,GO:0035639,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0046872,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 302.0
YHH3_k127_8090523_2 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000002293 217.0
YHH3_k127_8090523_3 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.00000000000000000000000000000000000000000004951 167.0
YHH3_k127_8090523_4 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.000000273 57.0
YHH3_k127_8459460_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 304.0
YHH3_k127_8459460_1 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002088 284.0
YHH3_k127_8459460_2 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000005738 151.0
YHH3_k127_8459460_3 pfam abc1 K03688 - - 0.00000000000000000000000011 126.0
YHH3_k127_8459460_5 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin - - - 0.0005008 51.0
YHH3_k127_8481852_0 UvrD/REP helicase N-terminal domain K03657,K07465 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 594.0
YHH3_k127_8481852_1 Functions in MreBCD complex in some organisms K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 370.0
YHH3_k127_8481852_2 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.0000000000000000000008698 104.0
YHH3_k127_8481852_3 - - - - 0.0001211 45.0
YHH3_k127_8481852_4 - - - - 0.0005298 45.0
YHH3_k127_8542001_0 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 386.0
YHH3_k127_8542001_1 TIGRFAM cysteine K12339 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 297.0
YHH3_k127_8542001_10 - - - - 0.0000000006756 61.0
YHH3_k127_8542001_11 Phosphotransferase enzyme family - - - 0.000000002417 68.0
YHH3_k127_8542001_12 Psort location Cytoplasmic, score 8.96 - - - 0.00000006086 62.0
YHH3_k127_8542001_13 - - - - 0.000000274 55.0
YHH3_k127_8542001_14 Tfp pilus assembly protein FimV - - - 0.000001403 57.0
YHH3_k127_8542001_2 transmembrane transporter activity K08166,K08170 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000003638 225.0
YHH3_k127_8542001_3 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000645 223.0
YHH3_k127_8542001_4 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000002616 163.0
YHH3_k127_8542001_5 Protein of unknown function (DUF2750) - - - 0.00000000000000000000000000000004209 133.0
YHH3_k127_8542001_6 - - - - 0.00000000000000000000000000001437 125.0
YHH3_k127_8542001_7 - - - - 0.00000000000000000000001661 104.0
YHH3_k127_8542001_8 - - - - 0.0000000000000006927 87.0
YHH3_k127_868305_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 372.0
YHH3_k127_868305_1 Beta propeller domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052 370.0
YHH3_k127_868305_2 TIGRFAM periplasmic serine protease, Do DeqQ family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000001238 233.0
YHH3_k127_868305_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000001531 220.0
YHH3_k127_868305_4 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000001345 162.0
YHH3_k127_868305_5 acetyltransferase K03828 - - 0.0000000000000000000000000000001286 128.0
YHH3_k127_8923778_0 membrane protein, required for N-linked glycosylation K07151 - 2.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009707 271.0
YHH3_k127_8923778_1 metallocarboxypeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001377 278.0
YHH3_k127_8923778_2 PFAM helix-turn-helix domain protein K07729 - - 0.000000000000000001025 87.0
YHH3_k127_8923778_4 Transposase - - - 0.00000000001074 70.0
YHH3_k127_8923778_5 Domain of unknown function (DUF4419) - - - 0.000000006442 68.0
YHH3_k127_8923778_6 - - - - 0.0000003296 57.0
YHH3_k127_8923778_7 membrane protein (DUF2178) - - - 0.000005463 53.0
YHH3_k127_8923778_8 - - - - 0.0003329 49.0
YHH3_k127_9080082_1 TIGRFAM fructose-1,6-bisphosphatase, class II K02446 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005398 320.0
YHH3_k127_9080082_2 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 301.0
YHH3_k127_9080082_3 Fructose-bisphosphate aldolase class-II - - - 0.00000000000000000000000000000000000000000000000000000000000007351 231.0
YHH3_k127_9080082_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K07291 - 2.7.8.34 0.00000000000000000000000000000000000000000000000000000000009156 213.0
YHH3_k127_9080082_6 - - - - 0.00000000003329 65.0
YHH3_k127_9193618_0 Cell division protein FtsA K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 400.0
YHH3_k127_9193618_1 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000001 255.0
YHH3_k127_9193618_10 domain, Protein K09766 - - 0.000000000000003465 90.0
YHH3_k127_9193618_11 Transcriptional regulator - - - 0.000000000001839 75.0
YHH3_k127_9193618_12 haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.00000000004825 72.0
YHH3_k127_9193618_13 COG1214 Inactive homolog of metal-dependent proteases K01409,K14742 GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.00001484 53.0
YHH3_k127_9193618_2 Metal dependent phosphohydrolases with conserved 'HD' motif. K06950 - - 0.000000000000000000000000000000000000000000000000000000000003063 215.0
YHH3_k127_9193618_3 Glycosyltransferase like family 2 K03606,K07011 - - 0.00000000000000000000000000000000000000000000000000000005292 207.0
YHH3_k127_9193618_4 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000231 207.0
YHH3_k127_9193618_5 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000004338 176.0
YHH3_k127_9193618_6 Protein of unknown function (DUF4012) - - - 0.00000000000000000000000000000003754 145.0
YHH3_k127_9193618_7 Conserved TM helix - - - 0.000000000000000000000004216 111.0
YHH3_k127_9193618_8 Transcriptional regulator, TrmB - - - 0.00000000000000001264 92.0
YHH3_k127_9193618_9 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.0000000000000000258 84.0
YHH3_k127_9287403_0 AI-2E family transporter K03548 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.000000000000000000000000000000000000000000238 171.0
YHH3_k127_9287403_1 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000009017 145.0
YHH3_k127_9287403_2 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000001373 143.0
YHH3_k127_9287403_3 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000004316 123.0
YHH3_k127_9287403_4 Trypsin - - - 0.0000000000000000000000000544 120.0
YHH3_k127_9287403_5 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000004209 55.0
YHH3_k127_9287403_6 Polysaccharide export protein, MPA1 family - - - 0.000009471 55.0
YHH3_k127_9410302_0 MgsA AAA+ ATPase C terminal K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 491.0
YHH3_k127_9410302_1 Penicillin-binding Protein dimerisation domain K03587,K08384 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008144,GO:0008150,GO:0008658,GO:0008955,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0031224,GO:0031226,GO:0031406,GO:0032153,GO:0033218,GO:0033293,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:1901363,GO:1901681 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009589 388.0
YHH3_k127_9410302_10 peptidase C14 caspase catalytic subunit p20 - - - 0.0007219 50.0
YHH3_k127_9410302_2 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007979 277.0
YHH3_k127_9410302_3 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000003415 194.0
YHH3_k127_9410302_4 PFAM Metal-dependent phosphohydrolase, HD K06951 - - 0.0000000000000000000000000000000000000000000003671 172.0
YHH3_k127_9410302_5 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.0000000000000000000000000000000331 138.0
YHH3_k127_9410302_6 Histone methylation protein DOT1 - - - 0.000000000000000000000000000105 121.0
YHH3_k127_9410302_7 Protein of unknown function (DUF917) K09703 - - 0.00000000000000000001759 103.0
YHH3_k127_9410302_8 Belongs to the NUDIX hydrolase family K03574 - 3.6.1.55 0.000000001048 70.0
YHH3_k127_9410302_9 C-terminal domain of CHU protein family - - - 0.0000001967 63.0
YHH3_k127_9640679_0 Mn2 and Fe2 transporters of the NRAMP family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 379.0
YHH3_k127_9640679_1 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 337.0
YHH3_k127_9640679_10 Domain of unknown function (DUF4430) - - - 0.0008371 48.0
YHH3_k127_9640679_2 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00226,K00254 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.3.5.2,1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000191 259.0
YHH3_k127_9640679_3 - - - - 0.00000000000000000000000000000000000119 145.0
YHH3_k127_9640679_4 phosphoribosylaminoimidazolesuccinocarboxamide synthase activity K01587,K01756,K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016874,GO:0016879,GO:0016881,GO:0044424,GO:0044444,GO:0044464 4.1.1.21,4.3.2.2,6.3.2.6 0.0000000000000000000000000000000009745 137.0
YHH3_k127_9640679_5 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000002163 139.0
YHH3_k127_9640679_6 ABC-2 family transporter protein K01992 - - 0.0000000000000000000022 104.0
YHH3_k127_9640679_7 PFAM SCP-like extracellular - - - 0.00000000000000000004073 104.0
YHH3_k127_9640679_8 TIGRFAM addiction module antidote protein, HigA family K21498 - - 0.00000007245 59.0
YHH3_k127_9640679_9 Cell envelope-related transcriptional attenuator domain - - - 0.000003687 59.0