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Overview

ID MAG04566
Name YHH3_bin.28
Sample SMP0123
Taxonomy
Kingdom Bacteria
Phylum Bacteroidota
Class Bacteroidia
Order Chitinophagales
Family Saprospiraceae
Genus
Species
Assembly information
Completeness (%) 85.75
Contamination (%) 2.38
GC content (%) 50.0
N50 (bp) 9,925
Genome size (bp) 2,555,344

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2197

Gene name Description KEGG GOs EC E-value Score Sequence
YHH3_k127_10063980_0 ligase activity - - - 7.491e-224 702.0
YHH3_k127_10063980_1 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009925 608.0
YHH3_k127_10063980_2 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 339.0
YHH3_k127_10063980_3 Prokaryotic glutathione synthetase, ATP-grasp domain K01920 - 6.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000005062 255.0
YHH3_k127_10063980_4 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000008755 113.0
YHH3_k127_10082260_0 PFAM Formylglycine-generating sulfatase enzyme - - - 3.929e-206 647.0
YHH3_k127_10082260_1 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005515 547.0
YHH3_k127_10082260_2 Gliding motility-associated protein GldM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006302 317.0
YHH3_k127_10082260_3 of the beta-lactamase superfamily I K06167 - 3.1.4.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009269 284.0
YHH3_k127_10082260_4 TIGRFAM gliding motility-associated protein GldL - - - 0.000000000000000000000000000000000000000000000000000000000000000001504 231.0
YHH3_k127_10082260_5 Type IX secretion system membrane protein PorP/SprF - - - 0.0000000000000000000000000000000000000000000000000000001194 207.0
YHH3_k127_10082260_6 - - - - 0.0005623 44.0
YHH3_k127_10111987_0 Molydopterin dinucleotide binding domain K08352 - 1.8.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003715 597.0
YHH3_k127_10111987_1 Protein of unknown function (DUF3307) - - - 0.0000000000000000000000000000000000000000000000000000000000000005524 227.0
YHH3_k127_10111987_2 SatD family (SatD) - - - 0.000000000000000000000000000000000000000000000000000000000004878 214.0
YHH3_k127_10111987_3 secondary active sulfate transmembrane transporter activity K03321 - - 0.0000000000001772 72.0
YHH3_k127_10148892_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005798 582.0
YHH3_k127_10148892_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 501.0
YHH3_k127_10148892_10 TraB family K09973 - - 0.0000000000000000000000000000000000000000000000000000000000000000009684 239.0
YHH3_k127_10148892_11 PFAM EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000001543 229.0
YHH3_k127_10148892_12 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000004873 222.0
YHH3_k127_10148892_13 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.00000000000000000000000000000000000000008929 152.0
YHH3_k127_10148892_14 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000008239 132.0
YHH3_k127_10148892_15 - - - - 0.0000000000000000000000000000006124 128.0
YHH3_k127_10148892_16 Hydrolase Nlp P60 K13695 - - 0.00000000000000000000000000001528 125.0
YHH3_k127_10148892_17 - - - - 0.00000000000000000000000001527 116.0
YHH3_k127_10148892_18 Colicin V production protein K03558 - - 0.00000000000000005871 88.0
YHH3_k127_10148892_19 Fungalysin metallopeptidase (M36) - - - 0.000000000000005827 83.0
YHH3_k127_10148892_2 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004071 491.0
YHH3_k127_10148892_20 cellulose binding - - - 0.00000003359 64.0
YHH3_k127_10148892_3 Alanine dehydrogenase/PNT, C-terminal domain K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 387.0
YHH3_k127_10148892_4 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 335.0
YHH3_k127_10148892_5 Peptidase, M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 347.0
YHH3_k127_10148892_6 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218,K03437 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009817 273.0
YHH3_k127_10148892_7 amidohydrolase K13566 - 3.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000001075 271.0
YHH3_k127_10148892_8 COGs COG0663 Carbonic anhydrase acetyltransferase isoleucine patch superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003438 264.0
YHH3_k127_10148892_9 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000001712 248.0
YHH3_k127_10172715_0 bleomycin resistance protein - - - 0.0000000000000000000000000000000000000000000000000000003825 195.0
YHH3_k127_10172715_1 - - - - 0.0000000000000000000000000000003686 128.0
YHH3_k127_10172715_2 bleomycin resistance protein - - - 0.0000000000000000962 80.0
YHH3_k127_10172715_3 SPTR CHU large protein - - - 0.0000001265 63.0
YHH3_k127_10198732_0 TonB dependent receptor - - - 0.0 1133.0
YHH3_k127_10198732_1 DNA polymerase III alpha subunit K02337,K14162 - 2.7.7.7 0.0 1078.0
YHH3_k127_10198732_2 Pkd domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 494.0
YHH3_k127_10198732_3 impB/mucB/samB family K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007096 457.0
YHH3_k127_10198732_4 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000000000000000000000000000000212 209.0
YHH3_k127_10198732_5 - - - - 0.00000000000000000000000000000000000000004416 156.0
YHH3_k127_10214165_0 Exodeoxyribonuclease V, gamma subunit K03657 - 3.6.4.12 3.459e-276 883.0
YHH3_k127_10214165_1 transglycosylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005263 332.0
YHH3_k127_10214165_2 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000368 270.0
YHH3_k127_10214165_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K05606 - 5.1.99.1 0.000000000000000000000000000000000000000000000000000003617 195.0
YHH3_k127_10214165_4 S23 ribosomal protein - - - 0.0000000000000000000000000000000000005097 143.0
YHH3_k127_10214165_5 Protein of unknown function, DUF393 - - - 0.0000000000000000000000000001197 119.0
YHH3_k127_10214165_6 Lysine exporter protein (Lyse ygga) - - - 0.000000000000000000001582 102.0
YHH3_k127_10214165_7 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 0.00000000000000000009646 90.0
YHH3_k127_1026391_0 Belongs to the UbiD family K03182 - 4.1.1.98 6.817e-250 781.0
YHH3_k127_1026391_1 PFAM Cytochrome c, class I - - - 3.498e-197 625.0
YHH3_k127_1026391_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 436.0
YHH3_k127_1026391_3 Oxidoreductase K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 389.0
YHH3_k127_1027349_0 hemolysin activation secretion protein - - - 3.442e-271 870.0
YHH3_k127_1027349_1 of the RND superfamily K07003 - - 8.84e-234 745.0
YHH3_k127_1027349_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 498.0
YHH3_k127_1027349_3 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001152 279.0
YHH3_k127_1027349_4 beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005708 264.0
YHH3_k127_1027349_5 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000001607 242.0
YHH3_k127_1027349_6 PFAM Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000002497 136.0
YHH3_k127_1027349_7 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.000000000005569 68.0
YHH3_k127_10280735_0 Amidophosphoribosyltransferase K00764 - 2.4.2.14 2.39e-279 871.0
YHH3_k127_10280735_1 PFAM Metallo-beta-lactamase superfamily - - - 1.588e-225 706.0
YHH3_k127_10280735_10 phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000002727 209.0
YHH3_k127_10280735_11 YeeE YedE family K07112 - - 0.000000000000000000000000000000000000000000000000000001899 198.0
YHH3_k127_10280735_12 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000004111 164.0
YHH3_k127_10280735_13 DinB superfamily - - - 0.000000000000000000000000000000000000000009853 161.0
YHH3_k127_10280735_14 CpeT/CpcT family (DUF1001) - - - 0.00000000000000000000000000000000000000001719 165.0
YHH3_k127_10280735_15 Thioredoxin K03671 - - 0.000000000000000000000000000000000000002761 148.0
YHH3_k127_10280735_16 Protein of unknown function (DUF3365) - - - 0.000000000000000000000000000000002761 136.0
YHH3_k127_10280735_17 PFAM Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000001406 116.0
YHH3_k127_10280735_18 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000001753 121.0
YHH3_k127_10280735_19 PFAM Rhodanese-like domain - - - 0.000000000000000000000000004467 113.0
YHH3_k127_10280735_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 4.626e-200 639.0
YHH3_k127_10280735_20 - - - - 0.000000000000000000000002181 105.0
YHH3_k127_10280735_21 Rhodanese-related sulfurtransferase - - - 0.000000000000000000001523 100.0
YHH3_k127_10280735_22 PFAM Rhodanese-like domain - - - 0.0000000000000000002532 91.0
YHH3_k127_10280735_23 Domain of unknown function (DUF4412) - - - 0.0000000003111 71.0
YHH3_k127_10280735_3 Imidazolonepropionase and related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 507.0
YHH3_k127_10280735_4 PFAM M42 glutamyl aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 473.0
YHH3_k127_10280735_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 401.0
YHH3_k127_10280735_6 PFAM Aminotransferase class I and II K14287 - 2.6.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 402.0
YHH3_k127_10280735_7 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537 398.0
YHH3_k127_10280735_8 AhpC TSA family K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002916 330.0
YHH3_k127_10280735_9 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000001326 216.0
YHH3_k127_103621_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1275.0
YHH3_k127_103621_1 Periplasmic component of the Tol biopolymer transport system - - - 0.0 1040.0
YHH3_k127_103621_2 Zinc carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 530.0
YHH3_k127_103621_3 MafB19-like deaminase K01487 - 3.5.4.3 0.0000000009374 59.0
YHH3_k127_103621_4 metallopeptidase activity K09933 - - 0.0002197 47.0
YHH3_k127_10406273_0 Glycosyl hydrolase family 47 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 559.0
YHH3_k127_10406273_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 468.0
YHH3_k127_10406273_2 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005436 441.0
YHH3_k127_10406273_3 Thioredoxin - - - 0.0000000000000000000000000000000000000000000000000000007907 199.0
YHH3_k127_10406273_4 Protein of unknown function (DUF1624) - - - 0.0000000000000000000000000000000000000000000000000006903 187.0
YHH3_k127_10406273_5 - - - - 0.000000000000000000000000000000000000000000002005 168.0
YHH3_k127_10406273_6 - - - - 0.000000000000000000000000000000001721 132.0
YHH3_k127_10406273_7 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.0000000000004266 70.0
YHH3_k127_10414830_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 593.0
YHH3_k127_10414830_1 lipoprotein localization to outer membrane K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 427.0
YHH3_k127_10414830_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 377.0
YHH3_k127_10414830_3 AAA domain, putative AbiEii toxin, Type IV TA system K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003763 304.0
YHH3_k127_10479881_0 SnoaL-like polyketide cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001233 256.0
YHH3_k127_10479881_1 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000002098 176.0
YHH3_k127_10479881_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000005692 171.0
YHH3_k127_10479881_3 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000006912 138.0
YHH3_k127_10649153_0 TonB dependent receptor K16091 - - 2.445e-207 671.0
YHH3_k127_10649153_1 OsmC-like protein K06889,K07397 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006262 442.0
YHH3_k127_10649153_10 integral membrane protein - - - 0.0000000000000000000000000000000002418 140.0
YHH3_k127_10649153_2 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004916 368.0
YHH3_k127_10649153_3 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004343 357.0
YHH3_k127_10649153_4 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007957 315.0
YHH3_k127_10649153_5 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 301.0
YHH3_k127_10649153_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 308.0
YHH3_k127_10649153_7 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 290.0
YHH3_k127_10649153_8 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006574 267.0
YHH3_k127_10649153_9 FR47-like protein - - - 0.000000000000000000000000000000000000000005591 160.0
YHH3_k127_10676210_0 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 334.0
YHH3_k127_10676210_1 Glycosyl transferase family 2 K20534 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 327.0
YHH3_k127_10676210_2 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 321.0
YHH3_k127_10728160_0 Peptidase family C25 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 550.0
YHH3_k127_1074018_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 4.609e-246 776.0
YHH3_k127_1074018_1 iron-regulated protein - - - 0.0000000000000000000000000000000000000000000000000000000000113 213.0
YHH3_k127_1074018_2 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000002358 145.0
YHH3_k127_10752329_0 Glycosyltransferase like family 2 - - - 1.572e-199 641.0
YHH3_k127_10752329_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007011 321.0
YHH3_k127_10752329_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004085 267.0
YHH3_k127_10752329_3 amidohydrolase K01436 - - 0.000000000000000008292 85.0
YHH3_k127_10804878_0 Protein of unknown function (DUF3570) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004461 570.0
YHH3_k127_10804878_1 ApbE family K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008842 465.0
YHH3_k127_10804878_2 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 410.0
YHH3_k127_10804878_3 Sodium/calcium exchanger protein K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 379.0
YHH3_k127_10804878_4 Thiol-disulfide isomerase - - - 0.00000000000000000000000000000000000000000000005425 173.0
YHH3_k127_10804878_5 Domain of unknown function (DUF305) - - - 0.0000000000000000000000000000000000000000000006197 171.0
YHH3_k127_10804878_6 GCN5-related N-acetyl-transferase K06975 - - 0.000000000000000000000000000000266 124.0
YHH3_k127_10804878_7 Domain of unknown function (DUF4266) - - - 0.000000000000000000000001518 105.0
YHH3_k127_10819871_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 4.178e-305 946.0
YHH3_k127_10819871_1 Glycosyl transferase family 21 K00694 - 2.4.1.12 3.483e-236 740.0
YHH3_k127_10819871_10 Male sterility protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000316 269.0
YHH3_k127_10819871_11 - - - - 0.00000000000000000000000000000006913 141.0
YHH3_k127_10819871_12 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000384 92.0
YHH3_k127_10819871_2 CDP-glucose 4,6-dehydratase K01709 - 4.2.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005425 520.0
YHH3_k127_10819871_3 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005306 492.0
YHH3_k127_10819871_4 PFAM pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 447.0
YHH3_k127_10819871_5 Glycosyl hydrolase family 26 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 407.0
YHH3_k127_10819871_6 L,D-transpeptidase catalytic domain K19234 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 350.0
YHH3_k127_10819871_7 NADP oxidoreductase coenzyme F420-dependent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 340.0
YHH3_k127_10819871_8 COGs COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00978 - 2.7.7.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 327.0
YHH3_k127_10819871_9 Protein of unknown function (DUF3089) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 317.0
YHH3_k127_108374_0 DEAD DEAH box helicase K03724 - - 3.293e-242 762.0
YHH3_k127_108374_1 DNA ligase K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 7.975e-205 649.0
YHH3_k127_108374_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009104 593.0
YHH3_k127_108374_3 Domain of unknown function (DUF4010) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 423.0
YHH3_k127_108374_4 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 417.0
YHH3_k127_108374_5 peptide-methionine (S)-S-oxide reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 317.0
YHH3_k127_108374_6 - - - - 0.00000000000000000004186 90.0
YHH3_k127_108374_7 - - - - 0.000000000004779 71.0
YHH3_k127_108374_8 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00003788 55.0
YHH3_k127_10838982_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 462.0
YHH3_k127_10838982_1 lysine 2,3-aminomutase activity - - - 0.000006978 48.0
YHH3_k127_108757_0 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 524.0
YHH3_k127_108757_1 hydrolase, family 16 - - - 0.000000000000000000000000000000000000000000000000004392 184.0
YHH3_k127_10898361_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 2.708e-278 865.0
YHH3_k127_10898361_1 chelatase, subunit chli K07391 - - 5.432e-209 663.0
YHH3_k127_10898361_2 exodeoxyribonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003817 324.0
YHH3_k127_10898361_3 Protein of unknown function, DUF255 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000297 289.0
YHH3_k127_10898361_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000009968 193.0
YHH3_k127_10898361_5 Calx-beta domain - - - 0.00000000000000000000000000000002217 146.0
YHH3_k127_10933223_0 CoA binding domain - - - 7.82e-276 874.0
YHH3_k127_10933223_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 2.528e-244 767.0
YHH3_k127_10933223_10 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 293.0
YHH3_k127_10933223_11 Protein of unknown function (DUF1572) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009981 273.0
YHH3_k127_10933223_12 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position - - - 0.0000000000000000000000000000000000000000000000002122 188.0
YHH3_k127_10933223_13 SMART PUR-alpha beta gamma DNA RNA-binding - - - 0.0000000000000000000000000000000000000000000001808 169.0
YHH3_k127_10933223_14 Helix-hairpin-helix motif - - - 0.00000000000000000000000000000000000008784 154.0
YHH3_k127_10933223_15 Universal stress protein family - - - 0.000000000000000000000000000000000000268 153.0
YHH3_k127_10933223_16 Competence protein K02238 - - 0.000000000000000000000000000000000002248 158.0
YHH3_k127_10933223_17 Alpha/beta hydrolase family K19707 - - 0.000000000000000000000000000000000008746 148.0
YHH3_k127_10933223_18 JAB/MPN domain K21140 - 3.13.1.6 0.0000000000000000000000000000004281 126.0
YHH3_k127_10933223_19 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000005533 124.0
YHH3_k127_10933223_2 ABC transporter K18889 - - 2.408e-230 727.0
YHH3_k127_10933223_20 ThiS family K03636 - - 0.00000000000000000000002393 102.0
YHH3_k127_10933223_21 Protein of unknown function (DUF2905) - - - 0.000000000000000000004576 94.0
YHH3_k127_10933223_22 Universal stress protein family - - - 0.0000007356 60.0
YHH3_k127_10933223_3 Fructose-1-6-bisphosphatase, N-terminal domain K03841 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005042 567.0
YHH3_k127_10933223_4 UBA THIF-type NAD FAD binding protein K21029,K21147 - 2.7.7.80,2.8.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008231 511.0
YHH3_k127_10933223_5 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003752 506.0
YHH3_k127_10933223_6 Metallo-beta-lactamase superfamily K06136 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002136 375.0
YHH3_k127_10933223_7 including yeast histone deacetylase and acetoin utilization protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008941 351.0
YHH3_k127_10933223_8 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009463 331.0
YHH3_k127_10933223_9 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 312.0
YHH3_k127_10952319_0 Non-essential cell division protein that could be required for efficient cell constriction - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 409.0
YHH3_k127_10952319_1 Response regulator of the LytR AlgR family K02477 - - 0.00000000000000005334 88.0
YHH3_k127_10964864_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 3.548e-220 690.0
YHH3_k127_10964864_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01534 - 3.6.3.3,3.6.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007082 491.0
YHH3_k127_10964864_10 Protein of unknown function (DUF3575) - - - 0.0000000000022 75.0
YHH3_k127_10964864_11 Protein of unknown function (DUF3575) - - - 0.0000000001216 69.0
YHH3_k127_10964864_12 Protein of unknown function (DUF3575) - - - 0.0000004447 59.0
YHH3_k127_10964864_2 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 419.0
YHH3_k127_10964864_3 ArgK protein K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 313.0
YHH3_k127_10964864_4 Peptidase, M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004389 286.0
YHH3_k127_10964864_5 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.0000000000000000000000000000000000000000000000000000000000000000000222 234.0
YHH3_k127_10964864_6 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000000000000000000000001166 186.0
YHH3_k127_10964864_7 Psort location Extracellular, score 9.64 - - - 0.00000000000000000001079 110.0
YHH3_k127_10964864_8 chlorophyll binding - - - 0.000000000000002518 92.0
YHH3_k127_10964864_9 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.0000000000002633 73.0
YHH3_k127_10999214_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.0 1053.0
YHH3_k127_10999214_1 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006492 536.0
YHH3_k127_10999214_10 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000001921 103.0
YHH3_k127_10999214_11 Dodecin K09165 - - 0.00000000000000000009195 90.0
YHH3_k127_10999214_12 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000002996 62.0
YHH3_k127_10999214_13 C-terminal domain of CHU protein family - - - 0.0001974 54.0
YHH3_k127_10999214_2 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 471.0
YHH3_k127_10999214_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002114 271.0
YHH3_k127_10999214_4 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000224 243.0
YHH3_k127_10999214_5 transglycosylase K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000001466 246.0
YHH3_k127_10999214_6 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000000000000001939 230.0
YHH3_k127_10999214_8 Bacterial protein of unknown function (DUF937) - - - 0.00000000000000000000000000000000000000004573 159.0
YHH3_k127_10999214_9 O-antigen ligase like membrane protein K02847 - - 0.0000000000000000000000000000000000000002975 165.0
YHH3_k127_11000333_0 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 318.0
YHH3_k127_11000333_1 DNA polymerase III K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005185 302.0
YHH3_k127_11011871_0 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004703 387.0
YHH3_k127_11011871_1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 296.0
YHH3_k127_11011871_2 domain protein - - - 0.00000000000000000000000000000002858 131.0
YHH3_k127_11011871_3 small membrane protein - - - 0.0000000000000000000000000113 114.0
YHH3_k127_11011871_4 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000003629 100.0
YHH3_k127_11020931_0 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 350.0
YHH3_k127_11020931_1 PKD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000004736 244.0
YHH3_k127_11025868_0 Hypothetical methyltransferase K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 474.0
YHH3_k127_11025868_1 COG0798 Arsenite efflux pump ACR3 and related K03325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 371.0
YHH3_k127_11025868_2 PFAM Low molecular weight phosphotyrosine protein phosphatase K01104,K03741 - 1.20.4.1,3.1.3.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000321 265.0
YHH3_k127_11025868_3 PFAM Bacterial regulatory protein, arsR family - - - 0.0000000000000000000000000000000000000000001144 161.0
YHH3_k127_11025868_4 PFAM Pentapeptide repeats (8 copies) - - - 0.0000000000000000000000000000002315 127.0
YHH3_k127_11045374_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1433.0
YHH3_k127_11045374_1 elongation factor G domain IV K02355 - - 0.0 1012.0
YHH3_k127_11045374_2 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003058 330.0
YHH3_k127_11045374_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002636 319.0
YHH3_k127_11045374_4 NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000007646 214.0
YHH3_k127_11045374_5 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000006066 198.0
YHH3_k127_11045374_6 PFAM Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000142 187.0
YHH3_k127_11045374_7 Cytochrome c K00406,K12263 - - 0.000000000000000006975 87.0
YHH3_k127_11126373_0 Fatty acid desaturase K00496 - 1.14.15.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003975 392.0
YHH3_k127_11126373_1 involved in cell wall biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004853 355.0
YHH3_k127_11126373_2 2Fe-2S iron-sulfur cluster binding domain K02613 - - 0.0000000000000000000000000000000002932 135.0
YHH3_k127_11126373_3 Lysine transporter LysE - - - 0.0002323 46.0
YHH3_k127_11228578_0 RNA polymerase, sigma-54 factor K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009798 610.0
YHH3_k127_11228578_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009288 409.0
YHH3_k127_11284416_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 1.464e-226 712.0
YHH3_k127_11284416_1 PFAM Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 341.0
YHH3_k127_11284416_2 Protein of unknown function (DUF3667) - - - 0.00000000000000001655 86.0
YHH3_k127_11290931_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 5.587e-306 950.0
YHH3_k127_11290931_1 HlyD family secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 404.0
YHH3_k127_11290931_2 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002137 288.0
YHH3_k127_11290931_3 Catalyzes the cleavage of beta-carotene at its central double bond (15,15') to yield two molecules of all-trans-retinal K21817 - 1.13.11.63 0.000000000000000000001373 105.0
YHH3_k127_11290931_5 lycopene cyclase K06443 - 5.5.1.19 0.0000000001049 64.0
YHH3_k127_11294304_0 COG0642 Signal transduction histidine kinase - - - 0.0 1267.0
YHH3_k127_11294304_1 Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004411 508.0
YHH3_k127_11294304_2 KR domain K00038 - 1.1.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 401.0
YHH3_k127_11294304_3 COGs COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 352.0
YHH3_k127_11294304_4 Y_Y_Y domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006212 263.0
YHH3_k127_11294304_5 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000002929 210.0
YHH3_k127_11294304_6 AdoMet dependent proline di-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000002624 209.0
YHH3_k127_11310767_0 Phosphoesterase PA-phosphatase related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000449 472.0
YHH3_k127_11310767_1 Transposase - - - 0.000000000000000002641 88.0
YHH3_k127_11310767_2 Transposase DDE domain group 1 - - - 0.0000001174 57.0
YHH3_k127_11363339_0 Formate--tetrahydrofolate ligase K01938 GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 499.0
YHH3_k127_11363339_1 Peptidase family M28 - - - 0.000000000000000000000000000000007234 134.0
YHH3_k127_11367676_0 acyl-CoA dehydrogenase K00252 - 1.3.8.6 4.071e-238 738.0
YHH3_k127_11367676_1 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001374 258.0
YHH3_k127_11367676_2 chlorophyll binding - - - 0.000000000000000000000000000000000000000008723 159.0
YHH3_k127_11367676_3 Beta-lactamase - - - 0.0000000000000000000000000000000000000007126 154.0
YHH3_k127_11367676_4 Protein of unknown function (DUF2892) - - - 0.00000000000000000000341 94.0
YHH3_k127_11367676_5 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000000002793 85.0
YHH3_k127_11413338_0 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001263 258.0
YHH3_k127_11413338_1 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000002079 231.0
YHH3_k127_11413338_2 Cytochrome c - - - 0.000000000000001405 83.0
YHH3_k127_11413338_3 amine dehydrogenase activity - - - 0.00000000000002964 87.0
YHH3_k127_11413338_4 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0006222 53.0
YHH3_k127_11422853_0 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006883 466.0
YHH3_k127_11422853_1 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 450.0
YHH3_k127_11422853_2 PFAM Peptidase family M20 M25 M40 K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000593 356.0
YHH3_k127_11422853_3 lysine 2,3-aminomutase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000286 344.0
YHH3_k127_11422853_4 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000008861 237.0
YHH3_k127_11422853_5 Belongs to the ATCase OTCase family K09065,K13043 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 0.0000000000000000000000000000006457 123.0
YHH3_k127_11422853_6 - - - - 0.0000000000000000000008906 100.0
YHH3_k127_11422853_7 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000000000000001015 78.0
YHH3_k127_11475939_0 RelA SpoT domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 350.0
YHH3_k127_11475939_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000149 280.0
YHH3_k127_11475939_2 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000000000000000000000001638 184.0
YHH3_k127_11475939_3 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000000000001143 139.0
YHH3_k127_11483571_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 3.335e-208 654.0
YHH3_k127_11483571_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000074 531.0
YHH3_k127_11483571_10 outer membrane chaperone Skp (OmpH) K06142 - - 0.00000000000000000000000000000000000000000000000000000003033 201.0
YHH3_k127_11483571_11 COG0607 Rhodanese-related sulfurtransferase - - - 0.000000000000000000000000000000000000000000006596 169.0
YHH3_k127_11483571_12 PFAM outer membrane chaperone Skp (OmpH) K06142 - - 0.000000000000000000000000000000003566 134.0
YHH3_k127_11483571_13 Domain of unknown function (DUF4294) - - - 0.00000000000000000000000001138 110.0
YHH3_k127_11483571_14 Lipid A 3-O-deacylase (PagL) - - - 0.00000000000004768 84.0
YHH3_k127_11483571_2 Histidine ammonia-lyase K01745 - 4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008458 535.0
YHH3_k127_11483571_3 epimerase dehydratase family K01784,K08679 - 5.1.3.2,5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 504.0
YHH3_k127_11483571_4 Oxidoreductase family, C-terminal alpha beta domain K13016 - 1.1.1.335 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 431.0
YHH3_k127_11483571_5 mannose-1-phosphate guanylyltransferase K00971 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 405.0
YHH3_k127_11483571_6 diphosphomevalonate decarboxylase K01597 - 4.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 376.0
YHH3_k127_11483571_7 Asp/Glu/Hydantoin racemase K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 323.0
YHH3_k127_11483571_8 Peptidase M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003591 281.0
YHH3_k127_11483571_9 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000001329 257.0
YHH3_k127_11574774_0 Ferrochelatase K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 444.0
YHH3_k127_11574774_1 Protein of unknown function (DUF1624) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000453 282.0
YHH3_k127_11574774_2 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000001385 214.0
YHH3_k127_11574774_3 PFAM Uncharacterised protein family (UPF0093) K08973 - - 0.00000000000000000000000000000000000000000000006431 174.0
YHH3_k127_11671753_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007019 511.0
YHH3_k127_11671753_1 Belongs to the UPF0176 family K07146 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 468.0
YHH3_k127_11671753_2 Belongs to the peptidase S8 family K13276 GO:0005575,GO:0005576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002869 465.0
YHH3_k127_11671753_3 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001312 297.0
YHH3_k127_11671753_4 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000000000000000000000000875 231.0
YHH3_k127_11671753_5 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000005075 177.0
YHH3_k127_11671753_6 PFAM Peptidase M22, glycoprotease K14742 - - 0.00000000000000000000000000000000000000466 154.0
YHH3_k127_11671753_7 DNA-binding transcription factor activity K03892 - - 0.00000000000000000000000000000007943 126.0
YHH3_k127_11671753_8 Molecular chaperone DnaK - - - 0.000000000000000000000000000009784 122.0
YHH3_k127_11770946_0 COG1228 Imidazolonepropionase and related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 493.0
YHH3_k127_11770946_1 Helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000001091 198.0
YHH3_k127_11770946_2 COG1228 Imidazolonepropionase and related - - - 0.00000001691 59.0
YHH3_k127_11924412_0 Sodium:sulfate symporter transmembrane region K14445 - - 1.431e-217 684.0
YHH3_k127_11924412_1 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 374.0
YHH3_k127_11924412_2 thiolester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 309.0
YHH3_k127_11924412_3 Leucine-rich repeat (LRR) protein - - - 0.00001837 53.0
YHH3_k127_11938482_0 Sortilin, neurotensin receptor 3, - - - 0.0 1333.0
YHH3_k127_11938482_1 COG0330 Membrane protease subunits stomatin prohibitin homologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006574 303.0
YHH3_k127_11938482_2 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000001573 225.0
YHH3_k127_11938482_4 DNA replication, synthesis of RNA primer K04066 - - 0.000000000000000000000000000000000000000000000000001625 201.0
YHH3_k127_11938482_5 Methyltransferase domain - - - 0.000000000000000000000000000000000000000002401 166.0
YHH3_k127_11979335_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 612.0
YHH3_k127_11979335_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 365.0
YHH3_k127_11979335_2 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000000009712 234.0
YHH3_k127_11979335_3 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000001269 214.0
YHH3_k127_12033149_0 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02622 - - 9.504e-305 944.0
YHH3_k127_12033149_1 Hydrogenase formation hypA family K04654 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 507.0
YHH3_k127_12033149_2 PFAM AIR synthase related protein, N-terminal domain K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 448.0
YHH3_k127_12033149_3 TIGRFAM NiFe hydrogenase maturation protein HypF K04656 - - 0.000000000000000000000000000000000000000000000000000000000000003462 228.0
YHH3_k127_12033149_4 PFAM hydrogenase expression formation protein (HUPF HYPC) K04653 - - 0.000000000000000000000000000136 117.0
YHH3_k127_12033149_5 PFAM S23 ribosomal protein - - - 0.0000000000000004267 82.0
YHH3_k127_12042321_0 TonB-dependent receptor plug - - - 0.0 1442.0
YHH3_k127_12042321_1 Starch-binding associating with outer membrane K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 587.0
YHH3_k127_12042321_2 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005442 283.0
YHH3_k127_12042321_3 - - - - 0.0000000000000000000000000005652 124.0
YHH3_k127_12042321_4 Belongs to the peptidase S8 family - - - 0.000000000000000000000000001946 122.0
YHH3_k127_12043635_0 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002016 262.0
YHH3_k127_12043635_1 OmpA MotB domain protein K02557 - - 0.00000000000000000000000000000000000000000000000000006428 199.0
YHH3_k127_12043635_2 Pregnancy-associated plasma protein-A - - - 0.000000000000000000000000000000000000000000000000004272 196.0
YHH3_k127_12043635_3 Inorganic pyrophosphatase K01507 - 3.6.1.1 0.0000000264 63.0
YHH3_k127_12091643_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 524.0
YHH3_k127_12091643_1 Domain of unknown function (DUF4143) K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007897 439.0
YHH3_k127_12091643_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000001943 91.0
YHH3_k127_12105002_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001923 287.0
YHH3_k127_12105002_1 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002298 270.0
YHH3_k127_12105002_2 HSCB C-terminal oligomerisation domain K04082 - - 0.000000000000000000000000000000001162 137.0
YHH3_k127_12105002_3 VIT family - - - 0.0000000000000000000000000000005176 123.0
YHH3_k127_12105002_4 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000002857 124.0
YHH3_k127_12105002_5 Acetyltransferase (GNAT) domain - - - 0.000005984 53.0
YHH3_k127_1215292_0 Domain of unknown function (DUF4976) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007202 463.0
YHH3_k127_1215292_1 Belongs to the glycosyl hydrolase 32 family K00692 - 2.4.1.10 0.00000000000000000000000000000000000000000000000005608 195.0
YHH3_k127_1215292_2 Belongs to the glycosyl hydrolase 32 family K01193 - 3.2.1.26 0.0000000000000000000000000000000000000004462 170.0
YHH3_k127_1215292_3 Concanavalin A-like lectin/glucanases superfamily - - - 0.00000000000000008452 95.0
YHH3_k127_1215292_4 COG1621 Beta-fructosidases (levanase invertase) K01193 - 3.2.1.26 0.00000000000003974 73.0
YHH3_k127_1215292_5 Glycosyl hydrolase family 32 K01193 - 3.2.1.26 0.000003397 60.0
YHH3_k127_12236934_0 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases K00174 - 1.2.7.11,1.2.7.3 9.111e-256 802.0
YHH3_k127_12236934_1 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 7.097e-232 728.0
YHH3_k127_12236934_10 Sporulation protein YtfJ (Spore_YtfJ) - - - 0.0000000000000000000000000000000195 131.0
YHH3_k127_12236934_11 - - - - 0.000000000000000000000000000004173 128.0
YHH3_k127_12236934_12 regulator of chromosome condensation, RCC1 - - - 0.00000000000000000000004732 117.0
YHH3_k127_12236934_13 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000000000000001877 102.0
YHH3_k127_12236934_15 - - - - 0.0000000007652 67.0
YHH3_k127_12236934_16 Peptide-N-glycosidase F, C terminal - - - 0.0000247 58.0
YHH3_k127_12236934_2 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 617.0
YHH3_k127_12236934_3 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000092 380.0
YHH3_k127_12236934_4 Zinc metalloprotease (Elastase) K01387 - 3.4.24.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007891 357.0
YHH3_k127_12236934_5 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007561 268.0
YHH3_k127_12236934_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000003265 230.0
YHH3_k127_12236934_7 Protein of unknown function (DUF2490) - - - 0.00000000000000000000000000000000000000000000000000000003653 203.0
YHH3_k127_12236934_8 Thioredoxin-like - - - 0.00000000000000000000000000000000002844 149.0
YHH3_k127_12236934_9 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00169,K03737 - 1.2.7.1 0.00000000000000000000000000000000005481 153.0
YHH3_k127_12237417_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 3.167e-209 677.0
YHH3_k127_12237417_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 429.0
YHH3_k127_12237417_2 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000001601 213.0
YHH3_k127_12243956_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 439.0
YHH3_k127_12243956_2 Protein of unknown function (DUF4256) - - - 0.00000000000000000000000000000002347 128.0
YHH3_k127_12255865_0 epimerase - - - 4.11e-205 647.0
YHH3_k127_12255865_1 Mate efflux family protein K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000749 550.0
YHH3_k127_12255865_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 484.0
YHH3_k127_12255865_3 PFAM ROK family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 379.0
YHH3_k127_12255865_4 Protein conserved in bacteria K09950 - - 0.00000000000000000000000000000000000000000000000000000004885 199.0
YHH3_k127_12255865_5 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000002747 158.0
YHH3_k127_12255865_6 - - - - 0.0000000000000000000000000000000000006186 145.0
YHH3_k127_12314214_0 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 421.0
YHH3_k127_12314214_1 Peptidase family C25 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007499 371.0
YHH3_k127_12314214_2 LppC putative lipoprotein - - - 0.0004591 45.0
YHH3_k127_12424086_0 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006687 253.0
YHH3_k127_12424086_1 PFAM Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000002087 241.0
YHH3_k127_12424086_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000007746 100.0
YHH3_k127_12424086_3 - - - - 0.0000000000000000000003795 101.0
YHH3_k127_1250077_0 Y_Y_Y domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 565.0
YHH3_k127_1250077_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 516.0
YHH3_k127_1250077_2 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 313.0
YHH3_k127_1250077_3 response regulator K07684 - - 0.0000000000000000000000000000000000000000000001113 171.0
YHH3_k127_1250077_5 Histidine kinase - - - 0.0000000000000000000000000000004057 125.0
YHH3_k127_12502929_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 1.526e-250 797.0
YHH3_k127_12502929_1 TonB-dependent Receptor Plug - - - 2.835e-229 735.0
YHH3_k127_12502929_10 NAD(P)H-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007567 319.0
YHH3_k127_12502929_11 COG0419 ATPase involved in DNA repair K03546 - - 0.000000000000000000000000000000000000000000000000000000000000000000002561 246.0
YHH3_k127_12502929_12 Putative cyclase - - - 0.00000000000000000000000000000000000000000000007854 175.0
YHH3_k127_12502929_13 Phosphonoacetate hydrolase K06193 - - 0.000000000000000000000000000000000000000000002455 169.0
YHH3_k127_12502929_14 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000002785 147.0
YHH3_k127_12502929_15 Protein of unknown function, DUF481 - - - 0.00000000000000000000000000000000006458 143.0
YHH3_k127_12502929_16 - - - - 0.0000000000000000000000000000000001702 136.0
YHH3_k127_12502929_17 Galactose oxidase, central domain - - - 0.00000000000000000000000000000001274 144.0
YHH3_k127_12502929_18 DoxX - - - 0.0000000000000000000000000002691 119.0
YHH3_k127_12502929_19 PFAM Heavy-metal-associated domain - - - 0.000000000000001959 78.0
YHH3_k127_12502929_2 PAP2 superfamily - - - 4.308e-223 700.0
YHH3_k127_12502929_20 COG COG1073 Hydrolases of the alpha beta superfamily K06889 - - 0.0000000000000618 83.0
YHH3_k127_12502929_3 aminoacyl-histidine dipeptidase K01270 - - 1.088e-208 658.0
YHH3_k127_12502929_4 GMC oxidoreductase K03333 - 1.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003003 599.0
YHH3_k127_12502929_5 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03547 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 497.0
YHH3_k127_12502929_6 synthase K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000355 470.0
YHH3_k127_12502929_7 Thiopurine S-methyltransferase (TPMT) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004462 347.0
YHH3_k127_12502929_8 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 340.0
YHH3_k127_12502929_9 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 329.0
YHH3_k127_12543593_0 metallocarboxypeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 432.0
YHH3_k127_12543593_1 Transcriptional regulator, Crp Fnr family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 404.0
YHH3_k127_12543593_10 Psort location Cytoplasmic, score 8.96 K02619 - 4.1.3.38 0.00000000000000000000000000000000306 137.0
YHH3_k127_12543593_11 negative regulation of translational initiation K13652 - - 0.00000000000000000000000000000000334 141.0
YHH3_k127_12543593_12 PFAM Penicillinase repressor - - - 0.0000000000000000000000000000285 122.0
YHH3_k127_12543593_13 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000119 105.0
YHH3_k127_12543593_14 - - - - 0.00000000000000004489 87.0
YHH3_k127_12543593_15 metallopeptidase activity K01179,K03768,K08738 - 3.2.1.4,5.2.1.8 0.00000000003437 77.0
YHH3_k127_12543593_16 Domain present in PSD-95, Dlg, and ZO-1/2. K08372 - - 0.000001383 59.0
YHH3_k127_12543593_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004478 389.0
YHH3_k127_12543593_3 DJ-1/PfpI family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003707 362.0
YHH3_k127_12543593_4 para-aminobenzoate synthase component I K01665 - 2.6.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 323.0
YHH3_k127_12543593_5 PFAM Peptidase M56, BlaR1 - - - 0.000000000000000000000000000000000000000000000000000000513 217.0
YHH3_k127_12543593_6 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000005546 191.0
YHH3_k127_12543593_7 IMP dehydrogenase activity K04767,K07182 - - 0.00000000000000000000000000000000000000000000000000001197 192.0
YHH3_k127_12543593_8 Belongs to the universal stress protein A family - - - 0.00000000000000000000000000000000000000000005538 170.0
YHH3_k127_12543593_9 Universal stress protein family - - - 0.0000000000000000000000000000000000002599 151.0
YHH3_k127_12595182_0 Histidine kinase - - - 0.0000000000000000000000000000000006852 151.0
YHH3_k127_12595182_1 Response regulator of the LytR AlgR family K02477 - - 0.00000000182 64.0
YHH3_k127_12595182_2 ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - 0.000175 55.0
YHH3_k127_12598208_0 PFAM peptidase T2 asparaginase 2 K13051 - 3.4.19.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 360.0
YHH3_k127_12598208_1 Phosphate acyltransferases - - - 0.000000000000000000000000000001096 134.0
YHH3_k127_12598208_2 Bacterial membrane protein YfhO - - - 0.0000000000000000000006636 96.0
YHH3_k127_12656384_0 Sulfotransferase domain - - - 0.000000000000000000000000000000000000431 153.0
YHH3_k127_12656384_1 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000000000001893 104.0
YHH3_k127_12750722_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.937e-198 625.0
YHH3_k127_12750722_1 phosphohydrolase K06885 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005756 269.0
YHH3_k127_12750722_2 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000007206 216.0
YHH3_k127_12750722_3 Protein involved in cellulose biosynthesis - - - 0.0000000000000000000000000000000000000002946 160.0
YHH3_k127_12851532_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 2.269e-253 787.0
YHH3_k127_12851532_1 domain, Protein K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 489.0
YHH3_k127_12851532_2 membrane protein involved in aromatic hydrocarbon degradation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008102 336.0
YHH3_k127_12851532_3 Domain of unknown function (DUF3127) - - - 0.000000000000000000000000000000000001066 143.0
YHH3_k127_12851532_4 transcriptional regulator - - - 0.000000000000000000000000000000001532 134.0
YHH3_k127_12851532_5 energy transducer activity K01181,K03832 - 3.2.1.8 0.000000000000000000000000000000003233 145.0
YHH3_k127_12851532_6 - - - - 0.000000000000000000000000000001841 129.0
YHH3_k127_12851532_8 Homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 0.000000000004048 67.0
YHH3_k127_12876844_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0 1109.0
YHH3_k127_12876844_1 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005964 496.0
YHH3_k127_12876844_2 SprB repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 406.0
YHH3_k127_12876844_3 Zn_pept - - - 0.000000007115 69.0
YHH3_k127_12889440_0 Flavin-binding monooxygenase-like K18277 - 1.14.13.148 4.049e-210 660.0
YHH3_k127_12889440_1 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000002629 171.0
YHH3_k127_12889440_2 Sugar (and other) transporter - - - 0.000176 44.0
YHH3_k127_1324048_0 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000086 486.0
YHH3_k127_1324048_1 AhpC/TSA family - - - 0.00000000000000000000000000000000000000000000000000000000000001717 220.0
YHH3_k127_1324048_2 Pfam Phospholipase Carboxylesterase - - - 0.00000000000000000000000000000000008577 139.0
YHH3_k127_1324048_3 - - - - 0.000000000000000000000005747 112.0
YHH3_k127_1343090_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0 1046.0
YHH3_k127_1343090_1 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000978 417.0
YHH3_k127_1343090_2 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00632 - 2.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 339.0
YHH3_k127_1343090_3 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004348 309.0
YHH3_k127_1343090_4 D,D-heptose 1,7-bisphosphate phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000007372 212.0
YHH3_k127_1343090_5 TonB family domain protein - - - 0.0000000000000000000000000000000000002574 153.0
YHH3_k127_1343090_6 biopolymer transport protein K03559 - - 0.0000000000000000000000000007772 117.0
YHH3_k127_1343090_7 Biopolymer transport protein ExbD/TolR K03559 - - 0.000000000000000000000000009298 113.0
YHH3_k127_1343662_0 AcrB/AcrD/AcrF family K07787,K15726 - - 5.935e-219 688.0
YHH3_k127_1343662_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 491.0
YHH3_k127_1343662_2 Ferritin-like domain K04047 - - 0.000000000000000000000000000000000000006654 151.0
YHH3_k127_1343662_3 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000002938 138.0
YHH3_k127_1343662_4 - - - - 0.0000000000001194 75.0
YHH3_k127_1454853_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 454.0
YHH3_k127_1454853_1 PFAM Scaffold protein Nfu NifU N terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 326.0
YHH3_k127_1454853_2 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000714 262.0
YHH3_k127_1454853_3 Lipid A 3-O-deacylase (PagL) - - - 0.00000000000000004696 93.0
YHH3_k127_1457052_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 7.434e-302 934.0
YHH3_k127_1457052_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 7.439e-199 627.0
YHH3_k127_1457052_2 Protein of unknown function (DUF819) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 574.0
YHH3_k127_1457052_3 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005138 387.0
YHH3_k127_1457052_4 PFAM Starch synthase, catalytic domain K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 351.0
YHH3_k127_1457052_5 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000036 276.0
YHH3_k127_1457052_6 Domain of unknown function (DUF4290) - - - 0.00000000000000000000000000000000000000000000000000000000225 207.0
YHH3_k127_1457052_7 Domain of unknown function (DUF4270) - - - 0.00000000000000000000000009839 122.0
YHH3_k127_1480511_0 Belongs to the glycerate kinase type-1 family K00865 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000007476 268.0
YHH3_k127_1480511_1 Superfamily I DNA and RNA K10742 - 3.6.4.12 0.00002286 55.0
YHH3_k127_1481734_0 PFAM Cytochrome C oxidase subunit II, periplasmic domain K00376 - 1.7.2.4 0.0 1118.0
YHH3_k127_1481734_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 508.0
YHH3_k127_1481734_10 IMP dehydrogenase activity K04767,K07182 - - 0.000000000000000000000000000000000000000000000004187 177.0
YHH3_k127_1481734_11 NosL K19342 - - 0.000000000000000000000000000000000000006071 151.0
YHH3_k127_1481734_12 transcriptional regulator - - - 0.00000000000000000000000000000000002963 140.0
YHH3_k127_1481734_13 Glycosyltransferase like family 2 - - - 0.000000000000002283 87.0
YHH3_k127_1481734_14 - - - - 0.000000001085 59.0
YHH3_k127_1481734_15 DNA mismatch repair protein - - - 0.00000003734 60.0
YHH3_k127_1481734_16 - - - - 0.0000002981 59.0
YHH3_k127_1481734_17 domain, Protein K08642 - - 0.00007958 55.0
YHH3_k127_1481734_2 Periplasmic copper-binding protein (NosD) K07218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 457.0
YHH3_k127_1481734_3 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 328.0
YHH3_k127_1481734_4 ABC-2 family transporter protein K19341 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005 310.0
YHH3_k127_1481734_5 ABC-type multidrug transport system ATPase component K19340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 302.0
YHH3_k127_1481734_6 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 298.0
YHH3_k127_1481734_7 lipoprotein involved in nitrous oxide reduction K19342 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001427 273.0
YHH3_k127_1481734_8 protein N-acetylglucosaminyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000003359 211.0
YHH3_k127_1481734_9 PFAM cytochrome c - - - 0.0000000000000000000000000000000000000000000000001526 181.0
YHH3_k127_1487796_0 Fe-S cluster K03616 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 316.0
YHH3_k127_1487796_1 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.000000000000000000000000000000000000000000000000002823 207.0
YHH3_k127_1487796_2 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000491 178.0
YHH3_k127_1499396_0 Methionine synthase K00548 - 2.1.1.13 0.0 1587.0
YHH3_k127_1499396_1 Cys/Met metabolism PLP-dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003244 492.0
YHH3_k127_1499396_2 PFAM FAD dependent oxidoreductase K15736 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 477.0
YHH3_k127_1499396_3 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 396.0
YHH3_k127_1499396_4 Bacterial transferase hexapeptide repeat K13018 - 2.3.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 313.0
YHH3_k127_1499396_5 Protein of unknown function (DUF2851) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003105 321.0
YHH3_k127_1499396_6 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000003005 196.0
YHH3_k127_1499396_7 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000000003245 190.0
YHH3_k127_1499396_8 Oxidoreductase family, C-terminal alpha beta domain K13016 - 1.1.1.335 0.0000000000000000000000000000000009546 132.0
YHH3_k127_1578880_0 Acyl-CoA dehydrogenase, middle domain K00232 - 1.3.3.6 3.715e-240 770.0
YHH3_k127_1578880_1 Sugar nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008944 463.0
YHH3_k127_1578880_10 C-terminal domain of CHU protein family - - - 0.00000000000000000001189 106.0
YHH3_k127_1578880_11 Belongs to the UPF0102 family K07460 - - 0.00000000000006363 78.0
YHH3_k127_1578880_12 Beta-lactamase - - - 0.00001332 59.0
YHH3_k127_1578880_13 Leucyl aminopeptidase K19701 - 3.4.11.10,3.4.11.6 0.000773 52.0
YHH3_k127_1578880_2 apolipoprotein N-acyltransferase K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005269 386.0
YHH3_k127_1578880_3 Bacterial phospho-glucose isomerase C-terminal SIS domain K15916 - 5.3.1.8,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008429 349.0
YHH3_k127_1578880_4 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 340.0
YHH3_k127_1578880_5 Spermidine synthase K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000001285 243.0
YHH3_k127_1578880_6 photosynthesis - - - 0.00000000000000000000000000000000000000000000000003026 185.0
YHH3_k127_1578880_7 Gliding motility-associated C-terminal domain - - - 0.0000000000000000000000000000000000000000000001864 186.0
YHH3_k127_1578880_8 Ribosomal protein L31 K02909 - - 0.0000000000000000000000000000000000000007015 151.0
YHH3_k127_1578880_9 - - - - 0.0000000000000000000000003887 110.0
YHH3_k127_1580331_0 COG1131 ABC-type multidrug transport system ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094 338.0
YHH3_k127_1580331_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000006072 223.0
YHH3_k127_1580331_2 TIGRFAM Gliding motility-associated ABC transporter permease protein GldF K01992 - - 0.00000000000000000000000000000000000004875 145.0
YHH3_k127_166099_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 5.857e-240 749.0
YHH3_k127_166099_1 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 354.0
YHH3_k127_166099_10 30S ribosomal protein Thx K19033 - - 0.00008775 46.0
YHH3_k127_166099_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 335.0
YHH3_k127_166099_3 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001595 281.0
YHH3_k127_166099_4 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000001748 230.0
YHH3_k127_166099_5 TIGRFAM endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000002862 161.0
YHH3_k127_166099_6 Thioredoxin - - - 0.00000000000000000000000000000000000000005954 157.0
YHH3_k127_166099_7 acr, cog1399 - - - 0.0000000000000000000000000000000000000002289 156.0
YHH3_k127_166099_9 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000003088 94.0
YHH3_k127_1672269_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 4.117e-210 669.0
YHH3_k127_1672269_1 protein related to deoxyribodipyrimidine photolyase K06876 - - 2.45e-199 635.0
YHH3_k127_1672269_10 oxidoreductase activity - - - 0.00000003507 68.0
YHH3_k127_1672269_2 domain, Protein K20276 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007438 520.0
YHH3_k127_1672269_3 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 318.0
YHH3_k127_1672269_4 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006966 309.0
YHH3_k127_1672269_5 SdrD B-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003885 310.0
YHH3_k127_1672269_6 with different specificities (related to short-chain alcohol - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008896 253.0
YHH3_k127_1672269_7 COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002747 256.0
YHH3_k127_1672269_8 Protein of unknown function (DUF429) - - - 0.000000000000000000000000000003137 126.0
YHH3_k127_1672269_9 protein conserved in bacteria - - - 0.00000000000000002791 82.0
YHH3_k127_1746283_0 PFAM TonB-dependent Receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 629.0
YHH3_k127_1746283_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001102 255.0
YHH3_k127_1746283_2 ATPase kinase involved in NAD metabolism - - - 0.00000000000000000000001287 107.0
YHH3_k127_1747771_0 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 538.0
YHH3_k127_1747771_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 365.0
YHH3_k127_1747771_2 Domain of unknown function (DUF4837) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 299.0
YHH3_k127_1758497_0 Beta-eliminating lyase K01668 - 4.1.99.2 3.602e-222 696.0
YHH3_k127_1758497_1 Glycosyl hydrolases family 17 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 349.0
YHH3_k127_1758497_2 xylan catabolic process K03932 - - 0.00000000000000000000000000000000000000000000244 176.0
YHH3_k127_1758497_3 Y_Y_Y domain - - - 0.00000000000000000000003389 100.0
YHH3_k127_1783955_0 Phage plasmid primase, P4 family domain protein K06919 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 349.0
YHH3_k127_1783955_1 Type I restriction and modification enzyme - subunit R C terminal K01153 - 3.1.21.3 0.000000000000000000000000000000000000000000001158 169.0
YHH3_k127_1783955_2 Phage regulatory protein - - - 0.000131 49.0
YHH3_k127_1793661_0 Adenosine/AMP deaminase K01488 - 3.5.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 390.0
YHH3_k127_1793661_1 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009135 287.0
YHH3_k127_1793661_2 Endonuclease Exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004337 253.0
YHH3_k127_1793661_3 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000002351 180.0
YHH3_k127_1835064_0 aconitate hydratase K01681 - 4.2.1.3 0.0 1265.0
YHH3_k127_1835064_1 Ribosomal protein S1 K02945 - - 2.073e-302 943.0
YHH3_k127_1835064_2 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 1.149e-255 800.0
YHH3_k127_1835064_3 COG1233 Phytoene dehydrogenase and related K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 2.372e-227 713.0
YHH3_k127_1835064_4 PFAM ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006344 589.0
YHH3_k127_1835064_5 Squalene phytoene synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 389.0
YHH3_k127_1835064_6 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.0000000000000000000000000000000000000000000000000334 182.0
YHH3_k127_1835064_7 TIGRFAM lycopene cyclase domain - - - 0.000000000000000000000000000000000000007709 158.0
YHH3_k127_1835238_0 Glycosyl hydrolase family 109 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007802 547.0
YHH3_k127_1835238_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 465.0
YHH3_k127_1835238_2 Protein of unknown function DUF45 K07043 - - 0.0000000000000000000000000000000000000001479 160.0
YHH3_k127_1860621_0 ASPIC and UnbV - - - 6.241e-221 708.0
YHH3_k127_1860621_1 Domain of unknown function (DUF4397) - - - 1.429e-218 711.0
YHH3_k127_1860621_10 Protein of unknown function (DUF1698) - - - 0.00000000000000000000000000000000000000000000000000000003804 203.0
YHH3_k127_1860621_11 Domain of unknown function (DUF4397) - - - 0.0000000000000000000000000000000000000000000002074 173.0
YHH3_k127_1860621_12 COG NOG25147 non supervised orthologous group - - - 0.000000000000000000000000000000000000129 157.0
YHH3_k127_1860621_13 Penicillinase repressor - - - 0.000000000000000000000000000000000004029 141.0
YHH3_k127_1860621_14 - - - - 0.0000000000000000002298 88.0
YHH3_k127_1860621_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 549.0
YHH3_k127_1860621_3 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 458.0
YHH3_k127_1860621_4 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004894 454.0
YHH3_k127_1860621_5 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004814 450.0
YHH3_k127_1860621_6 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 303.0
YHH3_k127_1860621_7 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002491 282.0
YHH3_k127_1860621_8 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000000000000000000000001371 211.0
YHH3_k127_1860621_9 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000009625 210.0
YHH3_k127_1864390_0 IgGFc binding protein - - - 0.000000000000000000000000000000000000000000000000000000001944 228.0
YHH3_k127_1864390_1 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.000000000000000000000000000000000002746 142.0
YHH3_k127_1864390_2 metallopeptidase activity K13735 - - 0.00000000000000000000000001097 128.0
YHH3_k127_1864390_3 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.00000000000000003088 83.0
YHH3_k127_189231_0 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003386 431.0
YHH3_k127_189231_1 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 390.0
YHH3_k127_189231_10 - - - - 0.0000000000000000002311 92.0
YHH3_k127_189231_11 - - - - 0.00000000000004952 75.0
YHH3_k127_189231_12 cellulose binding - - - 0.0001184 54.0
YHH3_k127_189231_13 - - - - 0.0001621 46.0
YHH3_k127_189231_3 Methyltransferase FkbM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000211 251.0
YHH3_k127_189231_4 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000004809 250.0
YHH3_k127_189231_5 Cupin 2, conserved barrel domain protein K09988 - 5.3.1.15 0.00000000000000000000000000000000000000000000000000000000000001133 218.0
YHH3_k127_189231_6 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000616 210.0
YHH3_k127_189231_7 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000001584 164.0
YHH3_k127_189231_8 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000002444 151.0
YHH3_k127_189231_9 beta-galactosidase activity - - - 0.0000000000000000000000000006697 115.0
YHH3_k127_1921693_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005219 515.0
YHH3_k127_1921693_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003904 463.0
YHH3_k127_1921693_10 Protein of unknown function (DUF3810) - - - 0.00000000000000000000000000002954 127.0
YHH3_k127_1921693_11 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.00000000000000000002298 94.0
YHH3_k127_1921693_2 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 455.0
YHH3_k127_1921693_3 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006282 427.0
YHH3_k127_1921693_4 phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 363.0
YHH3_k127_1921693_5 Polyphosphate nucleotide phosphotransferase, PPK2 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002414 283.0
YHH3_k127_1921693_6 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000002782 168.0
YHH3_k127_1921693_7 PFAM FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03767,K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000005927 168.0
YHH3_k127_1921693_8 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.000000000000000000000000000000000000000001266 160.0
YHH3_k127_1921693_9 N-acetylglucosamine kinase - - - 0.000000000000000000000000000000002775 140.0
YHH3_k127_1925440_0 Threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 482.0
YHH3_k127_1925440_1 PFAM ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000524 389.0
YHH3_k127_1925440_2 Electron transfer flavoprotein K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 363.0
YHH3_k127_1925440_3 Peptidase C1-like family K01372 - 3.4.22.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005873 355.0
YHH3_k127_1925440_4 PFAM Uncharacterised ACR, COG1259 K08999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002069 258.0
YHH3_k127_1925440_5 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000009222 235.0
YHH3_k127_1925440_6 - - - - 0.0000000001465 71.0
YHH3_k127_1944594_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 465.0
YHH3_k127_1944594_1 Phosphoglycerate mutase family - - - 0.0000000000000000000000722 106.0
YHH3_k127_199569_0 Fibronectin type III-like domain K05349 - 3.2.1.21 3.69e-201 639.0
YHH3_k127_199569_1 Psort location Cytoplasmic, score K03332 - 3.2.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007412 502.0
YHH3_k127_199569_2 Belongs to the glycosyl hydrolase 32 family K00692 - 2.4.1.10 0.0000000000000000000000000000007724 135.0
YHH3_k127_2046959_0 Alanine dehydrogenase/PNT, C-terminal domain K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005517 596.0
YHH3_k127_2046959_1 FAD linked oxidases, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008901 494.0
YHH3_k127_2046959_2 Phospholipid methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009224 258.0
YHH3_k127_2046959_3 energy transducer activity K03646,K03832 - - 0.000000005992 67.0
YHH3_k127_2052101_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1514.0
YHH3_k127_2052101_1 Pyridoxal-dependent decarboxylase conserved domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005553 582.0
YHH3_k127_2052101_2 Thioredoxin K01829 - 5.3.4.1 0.000000000000000000000000000000000008 141.0
YHH3_k127_2054899_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1072.0
YHH3_k127_2054899_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 1.37e-233 733.0
YHH3_k127_2054899_2 Participates in both transcription termination and antitermination K02600 - - 1.02e-211 663.0
YHH3_k127_2054899_3 Radical SAM K11784 - 1.21.98.1 1.038e-200 633.0
YHH3_k127_2054899_4 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 607.0
YHH3_k127_2054899_5 Protein of unknown function (DUF2400) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 339.0
YHH3_k127_2054899_6 PhoD-like phosphatase K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 340.0
YHH3_k127_2054899_7 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000273 289.0
YHH3_k127_2054899_8 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000001021 131.0
YHH3_k127_2054899_9 Domain of unknown function (DUF4783) - - - 0.0000000000000001417 84.0
YHH3_k127_2103156_0 Motility related/secretion protein - - - 0.0 2070.0
YHH3_k127_2103156_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 4.549e-295 918.0
YHH3_k127_2103156_2 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009937 419.0
YHH3_k127_2103156_3 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007016 357.0
YHH3_k127_2103156_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000139 212.0
YHH3_k127_2103156_5 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000001662 159.0
YHH3_k127_2103156_6 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000004793 108.0
YHH3_k127_2131709_0 heat shock protein 70 K04043,K04044 - - 1.85e-234 740.0
YHH3_k127_2131709_1 PFAM TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003304 443.0
YHH3_k127_2131709_2 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000795 372.0
YHH3_k127_2131709_3 Amidinotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006883 338.0
YHH3_k127_2131709_4 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000004763 179.0
YHH3_k127_2131709_5 Translation initiation factor SUI1 K03113 - - 0.00000000000000000000000000000000000002149 147.0
YHH3_k127_2224095_0 PFAM glycoside hydrolase family 3 - - - 1.183e-279 889.0
YHH3_k127_2224095_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 453.0
YHH3_k127_2224095_2 ABC-type transport system involved in lipoprotein release permease component K09808,K09815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 372.0
YHH3_k127_2224095_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 295.0
YHH3_k127_2224095_4 ROK family K00845,K00886 - 2.7.1.2,2.7.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000001168 252.0
YHH3_k127_2224095_5 Peptidyl-prolyl cis-trans isomerase K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000001877 247.0
YHH3_k127_2224095_6 - - - - 0.00000000000000000000000000000000000005301 146.0
YHH3_k127_2242576_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 595.0
YHH3_k127_2242576_1 Peptidase S8 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 368.0
YHH3_k127_2242576_2 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 301.0
YHH3_k127_2242576_3 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.0000000000000000000000000000000000000000000000000000002568 209.0
YHH3_k127_2242576_4 spermine spermidine synthase K08496 - - 0.000000000000543 81.0
YHH3_k127_2245513_0 secondary active sulfate transmembrane transporter activity K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000659 429.0
YHH3_k127_2245513_1 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000003572 241.0
YHH3_k127_2245513_2 - - - - 0.00000000000001519 83.0
YHH3_k127_2247992_0 PFAM Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008976 607.0
YHH3_k127_2247992_1 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004883 565.0
YHH3_k127_2247992_2 4 iron, 4 sulfur cluster binding - - - 0.000000000000000000002195 93.0
YHH3_k127_2323651_0 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 491.0
YHH3_k127_2323651_1 ABC transporter K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 395.0
YHH3_k127_2323651_10 Tetratricopeptide repeat - - - 0.0000000000000000009054 97.0
YHH3_k127_2323651_11 Oxygen tolerance - - - 0.0000000000005376 74.0
YHH3_k127_2323651_13 Oxygen tolerance - - - 0.0000003208 58.0
YHH3_k127_2323651_3 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 381.0
YHH3_k127_2323651_4 Phage integrase, N-terminal SAM-like domain K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000613 356.0
YHH3_k127_2323651_5 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 338.0
YHH3_k127_2323651_6 mechanosensitive ion channel K16052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 333.0
YHH3_k127_2323651_7 Bacterial Ig-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005256 295.0
YHH3_k127_2323651_8 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006667 255.0
YHH3_k127_2323651_9 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000001056 133.0
YHH3_k127_233312_0 Glycosyl transferase family 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008654 304.0
YHH3_k127_233312_1 Belongs to the 'phage' integrase family K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001745 281.0
YHH3_k127_233312_2 dithiol-disulfide isomerase involved in polyketide biosynthesis K01829 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000000000001592 221.0
YHH3_k127_233312_3 - - - - 0.000000000000000000006758 93.0
YHH3_k127_233312_4 - - - - 0.00000000000223 76.0
YHH3_k127_2369042_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 392.0
YHH3_k127_2369042_1 Haem-binding domain - - - 0.000000000000000000000000000000000000000000001235 170.0
YHH3_k127_2369042_2 Leucine-rich repeat (LRR) protein - - - 0.00000000000000000000886 108.0
YHH3_k127_2369042_3 - - - - 0.000000000008913 72.0
YHH3_k127_2388317_0 PFAM Transposase, Mutator family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 479.0
YHH3_k127_2388317_1 transposase activity K07483 - - 0.00000000000000000006869 92.0
YHH3_k127_2402493_0 TonB-dependent receptor K16089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 529.0
YHH3_k127_2402493_1 Phosphoesterase PA-phosphatase related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 493.0
YHH3_k127_2402493_2 Belongs to the glutaminase family K01425 - 3.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008725 364.0
YHH3_k127_2402493_3 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000003185 227.0
YHH3_k127_2402493_4 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000000000000000000006183 196.0
YHH3_k127_2402493_5 Belongs to the UPF0145 family - - - 0.0000000000000000000000000000000000000000005403 158.0
YHH3_k127_2402493_6 Diadenosine tetraphosphate hydrolase - - - 0.0000000000000000000000000000000000001807 147.0
YHH3_k127_2402493_7 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.00000000000000004601 81.0
YHH3_k127_2402493_8 - - - - 0.00000005986 62.0
YHH3_k127_2405236_0 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003825 417.0
YHH3_k127_2405236_1 Pfam:SusD K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 367.0
YHH3_k127_2405236_2 PKD domain - - - 0.000000000000001677 82.0
YHH3_k127_2521195_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 527.0
YHH3_k127_2521195_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 425.0
YHH3_k127_2521195_10 - - - - 0.000004066 54.0
YHH3_k127_2521195_11 - - - - 0.00002234 54.0
YHH3_k127_2521195_2 RmuC family K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 386.0
YHH3_k127_2521195_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003897 344.0
YHH3_k127_2521195_4 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005304 274.0
YHH3_k127_2521195_5 Belongs to the ATCase OTCase family K09065,K13043 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 0.000000000000000000000000000000000000000000000006528 175.0
YHH3_k127_2521195_6 - - - - 0.00000000000000000000000000000000000000007813 162.0
YHH3_k127_2521195_7 Protein of unknown function (DUF4199) - - - 0.00000000000000000000000000000000000004041 148.0
YHH3_k127_2521195_8 - - - - 0.00000000000000000000000000437 117.0
YHH3_k127_2521195_9 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000002766 79.0
YHH3_k127_2530165_0 Heat shock protein Hsp90 K04079 - - 3.209e-247 777.0
YHH3_k127_2530165_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K01929 - 5.1.1.1,6.3.2.10 4.046e-203 659.0
YHH3_k127_2530165_2 PPIC-type PPIASE domain K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009427 607.0
YHH3_k127_2530165_3 peptidylprolyl isomerase K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000387 435.0
YHH3_k127_2530165_4 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 419.0
YHH3_k127_2530165_5 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.00000000000000000000000000000000000000000000000000000154 203.0
YHH3_k127_2567832_0 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000287 169.0
YHH3_k127_2567832_1 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.00000000000000000000000000001729 123.0
YHH3_k127_2567832_2 Domain of unknown function (DUF4783) - - - 0.0002712 49.0
YHH3_k127_25965_0 2-epimerase K16213 - 5.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000005976 254.0
YHH3_k127_25965_1 - - - - 0.0000000000000000000000000000000000000000000001476 178.0
YHH3_k127_25965_2 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000006038 167.0
YHH3_k127_25965_3 Divergent 4Fe-4S mono-cluster - - - 0.0000000000000000000000000000008269 122.0
YHH3_k127_25965_4 Peptidase family M23 - - - 0.000000000267 62.0
YHH3_k127_2599617_0 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 439.0
YHH3_k127_2599617_1 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005094 372.0
YHH3_k127_2599617_2 COGs COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006488 377.0
YHH3_k127_2599617_3 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002269 248.0
YHH3_k127_2599617_4 Acetyltransferase (GNAT) domain K03824 - - 0.0000000000000000000000000000000000000000000000002004 182.0
YHH3_k127_2599617_5 - - - - 0.0000000000000000000000000000000000000000000000007111 177.0
YHH3_k127_2599617_6 PFAM O-methyltransferase K00588 - 2.1.1.104 0.00000000000000000000000000000000000000001377 157.0
YHH3_k127_2599617_7 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000003248 159.0
YHH3_k127_2599617_8 - - - - 0.000000000000000000000000000000002639 133.0
YHH3_k127_2657860_0 Pfam Proprotein convertase - - - 5.163e-201 670.0
YHH3_k127_2657860_1 Animal haem peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 530.0
YHH3_k127_2657860_2 MatE K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 446.0
YHH3_k127_2657860_3 domain, Protein K20276 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 322.0
YHH3_k127_2657860_4 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000003278 232.0
YHH3_k127_2657860_5 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000002934 216.0
YHH3_k127_266885_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000003627 168.0
YHH3_k127_266885_1 response regulator receiver - - - 0.00000000000000000002181 95.0
YHH3_k127_266885_2 response regulator, receiver - - - 0.0000000000000009615 83.0
YHH3_k127_266885_3 Response regulator, receiver K02487,K02657,K02658,K06596 - - 0.000000001855 64.0
YHH3_k127_2705107_0 PFAM 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 561.0
YHH3_k127_2705107_1 Belongs to the CinA family K03742,K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 411.0
YHH3_k127_2705107_2 Ribosomal RNA adenine dimethylase - - - 0.0000000000000000000000000000000000000000237 161.0
YHH3_k127_2705107_3 PFAM Biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.00000000000000000000000000000000000000004425 161.0
YHH3_k127_2742691_0 PS-10 peptidase S37 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 559.0
YHH3_k127_2742691_1 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 374.0
YHH3_k127_2742691_2 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000404 60.0
YHH3_k127_2747456_0 BNR Asp-box repeat - - - 0.0 1404.0
YHH3_k127_2747456_1 Zn-dependent hydrolase K01069 - 3.1.2.6 7.946e-215 674.0
YHH3_k127_2747456_2 Peptide-N-glycosidase F, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000556 370.0
YHH3_k127_2747456_3 Thioesterase domain - - - 0.000000000000000000000000000000000000000000000000000000000001626 218.0
YHH3_k127_2747456_4 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000002516 175.0
YHH3_k127_2779566_0 Bacterial membrane protein YfhO - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 470.0
YHH3_k127_2784712_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.0 1740.0
YHH3_k127_2784712_1 Aldehyde dehydrogenase family K10217 - 1.2.1.32,1.2.1.85 3.943e-219 689.0
YHH3_k127_2784712_10 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000001245 221.0
YHH3_k127_2784712_11 NUDIX domain - - - 0.00000000000000000000000000000000000000000000000000004165 194.0
YHH3_k127_2784712_12 Belongs to the sigma-70 factor family - - - 0.000000000000000000000005581 109.0
YHH3_k127_2784712_14 Anti-sigma-K factor rskA - - - 0.0000000000004853 79.0
YHH3_k127_2784712_2 malic enzyme K00027,K00029 - 1.1.1.38,1.1.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 580.0
YHH3_k127_2784712_3 Peptidase, M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005462 447.0
YHH3_k127_2784712_4 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006096 383.0
YHH3_k127_2784712_5 Enoyl-(Acyl carrier protein) reductase K13775 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007724 353.0
YHH3_k127_2784712_6 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 347.0
YHH3_k127_2784712_7 Patatin-like phospholipase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 320.0
YHH3_k127_2784712_8 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001156 285.0
YHH3_k127_2784712_9 Two component transcriptional regulator, winged helix family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001356 280.0
YHH3_k127_2794772_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 3.536e-319 987.0
YHH3_k127_2794772_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 3.051e-279 865.0
YHH3_k127_2794772_10 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007719 368.0
YHH3_k127_2794772_11 Type IX secretion system membrane protein PorP/SprF - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005618 287.0
YHH3_k127_2794772_12 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000276 247.0
YHH3_k127_2794772_13 Methyltransferase domain K13623 - - 0.00000000000000000000000000000000000000000000000000000000000001332 223.0
YHH3_k127_2794772_14 Belongs to the arginase family K01479 - 3.5.3.8 0.000000000000000000000000000000000000000000000001288 188.0
YHH3_k127_2794772_15 Peptidase family C25 - - - 0.000000000000000000000000000000000000000005219 160.0
YHH3_k127_2794772_16 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000001212 101.0
YHH3_k127_2794772_2 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 9.922e-262 814.0
YHH3_k127_2794772_3 gliding motility-associated lipoprotein GldJ - - - 1.04e-229 719.0
YHH3_k127_2794772_4 NhaP-type Na H and K H - - - 2.751e-224 710.0
YHH3_k127_2794772_5 ABC transporter K18890 - - 2.911e-216 685.0
YHH3_k127_2794772_6 Amidase K02433 - 6.3.5.6,6.3.5.7 1.152e-197 630.0
YHH3_k127_2794772_7 Dehydrogenase K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 578.0
YHH3_k127_2794772_8 alanine dehydrogenase K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 522.0
YHH3_k127_2794772_9 Protein of unknown function (DUF3419) K13622 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000439 365.0
YHH3_k127_2805185_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 4.659e-289 903.0
YHH3_k127_2805185_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 4.732e-264 820.0
YHH3_k127_2805185_10 Protein of unknown function (DUF1761) - - - 0.0000000000000000000000000000000000000000000000000001586 190.0
YHH3_k127_2805185_11 Activator of Hsp90 ATPase - - - 0.000000000000000000000000000000000000000000000001613 177.0
YHH3_k127_2805185_12 Probable molybdopterin binding domain K07141 - 2.7.7.76 0.0000000000000000000000000000000008041 138.0
YHH3_k127_2805185_13 domain, Protein - - - 0.000000000000000000000007735 104.0
YHH3_k127_2805185_14 - - - - 0.000000000000000000007915 98.0
YHH3_k127_2805185_15 ATP synthase K02114 - - 0.000000000000000001707 87.0
YHH3_k127_2805185_16 - - - - 0.0008282 42.0
YHH3_k127_2805185_2 Carbon-nitrogen hydrolase - - - 1.719e-245 767.0
YHH3_k127_2805185_3 Membrane protein involved in D-alanine export - - - 1.884e-220 691.0
YHH3_k127_2805185_4 Patatin-like phospholipase - - - 1.282e-194 623.0
YHH3_k127_2805185_5 PFAM peptidase C45 acyl-coenzyme A 6-aminopenicillanic acid acyl-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 429.0
YHH3_k127_2805185_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 349.0
YHH3_k127_2805185_7 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000001766 244.0
YHH3_k127_2805185_8 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001087 242.0
YHH3_k127_2805185_9 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000007847 241.0
YHH3_k127_2840259_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 3.296e-305 953.0
YHH3_k127_2840259_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 604.0
YHH3_k127_2840259_10 Protein of unknown function (DUF1698) - - - 0.000000000000000000000000000000000000000000003168 172.0
YHH3_k127_2840259_11 Membrane - - - 0.00000000000000000000000007456 111.0
YHH3_k127_2840259_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 591.0
YHH3_k127_2840259_3 COGs COG2270 Permease of the major facilitator superfamily K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 428.0
YHH3_k127_2840259_4 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 366.0
YHH3_k127_2840259_5 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000982 332.0
YHH3_k127_2840259_6 Belongs to the RimK family K05844 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004779 303.0
YHH3_k127_2840259_7 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003 272.0
YHH3_k127_2840259_8 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) K03545 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004199 278.0
YHH3_k127_2840259_9 D-alanyl-D-alanine carboxypeptidase K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000005665 231.0
YHH3_k127_2915867_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 514.0
YHH3_k127_2915867_1 NAD dependent epimerase dehydratase family K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 499.0
YHH3_k127_2915867_2 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 458.0
YHH3_k127_2915867_3 transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000002854 251.0
YHH3_k127_2915867_4 - - - - 0.00000000000000000000000000000000000000006481 164.0
YHH3_k127_2915867_5 TIGRFAM rfaE bifunctional protein - - - 0.0003341 44.0
YHH3_k127_2934238_0 COG0659 Sulfate permease and related - - - 1.283e-205 651.0
YHH3_k127_2934238_1 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961,K01965,K01968 - 6.3.4.14,6.4.1.2,6.4.1.3,6.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006554 388.0
YHH3_k127_2934238_2 Transcriptional regulator - - - 0.00000000000000000000000000000000008997 138.0
YHH3_k127_2934238_3 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.0000000000000000000000000000000001254 146.0
YHH3_k127_2934238_4 Biotin-requiring enzyme K01960 - 6.4.1.1 0.000000000000000000000000000214 120.0
YHH3_k127_2934238_5 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.000000000000000000000003503 102.0
YHH3_k127_2934238_6 Belongs to the universal stress protein A family - - - 0.00000000000000000000002281 110.0
YHH3_k127_2939092_0 translation release factor activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 417.0
YHH3_k127_2939092_1 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000002691 154.0
YHH3_k127_2939092_2 COGs COG3324 protein related to lactoylglutathione lyase - - - 0.000000000000000000004241 93.0
YHH3_k127_2939092_3 Prolyl oligopeptidase family - - - 0.0000000002618 64.0
YHH3_k127_294453_0 TIGRFAM formate dehydrogenase, alpha subunit, archaeal-type K00123,K18332 - 1.12.1.3,1.17.1.9 3.252e-313 967.0
YHH3_k127_2949558_0 PFAM Integrase catalytic region - - - 0.00000000000000000000000000000000000000000000002019 189.0
YHH3_k127_2949558_1 PFAM IstB domain protein ATP-binding protein - - - 0.0000000000000000000000000000000000000000000002833 176.0
YHH3_k127_2949558_2 Potassium uptake protein K03499 - - 0.000000000000003558 78.0
YHH3_k127_2957859_0 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 1.372e-201 638.0
YHH3_k127_2957859_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 388.0
YHH3_k127_2957859_2 ABC transporter K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000000000000000000125 213.0
YHH3_k127_2957859_3 helix_turn_helix, mercury resistance - - - 0.000000000000000000001114 96.0
YHH3_k127_2957859_4 Protein of unknown function (DUF3667) - - - 0.0009869 49.0
YHH3_k127_2995695_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 525.0
YHH3_k127_2995695_1 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000002391 106.0
YHH3_k127_2998217_0 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 333.0
YHH3_k127_2998217_1 ABC transporter K09691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003705 258.0
YHH3_k127_2998217_2 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000001829 220.0
YHH3_k127_2998217_3 Transport permease protein K09690 - - 0.00000000000000000000000000000000000000000004195 172.0
YHH3_k127_3024598_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 4.962e-198 624.0
YHH3_k127_3024598_1 PFAM Phosphoadenosine phosphosulfate reductase K00957 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 471.0
YHH3_k127_3024598_2 Inositol monophosphatase family K01082 - 3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008873 294.0
YHH3_k127_3024598_3 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.000000000000000000000000000000000000000000006164 167.0
YHH3_k127_3070237_0 decarboxylase K01585 - 4.1.1.19 5.264e-228 713.0
YHH3_k127_3070237_1 Deoxyhypusine synthase K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005402 511.0
YHH3_k127_3070237_2 NADH:flavin oxidoreductase / NADH oxidase family K10680 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006957 407.0
YHH3_k127_3070237_3 Arginase family K01480 - 3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 383.0
YHH3_k127_3070237_4 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000002015 224.0
YHH3_k127_3070237_5 - - - - 0.0000000000000001687 88.0
YHH3_k127_3103179_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1163.0
YHH3_k127_3103179_1 Amidohydrolase family - - - 9.383e-215 681.0
YHH3_k127_3103179_10 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000009347 232.0
YHH3_k127_3103179_11 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000001329 222.0
YHH3_k127_3103179_12 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000006667 201.0
YHH3_k127_3103179_13 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000327 191.0
YHH3_k127_3103179_14 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000001462 168.0
YHH3_k127_3103179_15 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000001746 156.0
YHH3_k127_3103179_16 Acetyltransferase (GNAT) domain K00657 - 2.3.1.57 0.00000000000000000000000000000000000000002878 157.0
YHH3_k127_3103179_17 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000004863 142.0
YHH3_k127_3103179_18 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000006774 135.0
YHH3_k127_3103179_19 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000001137 134.0
YHH3_k127_3103179_2 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004249 443.0
YHH3_k127_3103179_20 single-stranded DNA-binding protein K03111 - - 0.00000000000000000000000000005398 121.0
YHH3_k127_3103179_21 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.0000000000000000000000000009162 115.0
YHH3_k127_3103179_22 Belongs to the universal ribosomal protein uL29 family K02904 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000001578 105.0
YHH3_k127_3103179_23 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000008631 93.0
YHH3_k127_3103179_3 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 390.0
YHH3_k127_3103179_4 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 302.0
YHH3_k127_3103179_5 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008316 294.0
YHH3_k127_3103179_6 Forms part of the polypeptide exit tunnel K02926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004096 260.0
YHH3_k127_3103179_7 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000331 264.0
YHH3_k127_3103179_8 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000001029 239.0
YHH3_k127_3103179_9 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000004264 234.0
YHH3_k127_3125690_0 COG0188 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) A subunit K02621 - - 0.0 1185.0
YHH3_k127_3125690_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.136e-284 880.0
YHH3_k127_3125690_10 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 452.0
YHH3_k127_3125690_11 Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 433.0
YHH3_k127_3125690_12 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006509 410.0
YHH3_k127_3125690_13 Transporter associated domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 405.0
YHH3_k127_3125690_14 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 396.0
YHH3_k127_3125690_15 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 305.0
YHH3_k127_3125690_16 COG2812 DNA polymerase III, gamma tau subunits K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 300.0
YHH3_k127_3125690_17 Belongs to the peptidase S8 family K21636 - 1.1.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003931 294.0
YHH3_k127_3125690_18 ECF sigma factor K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003233 243.0
YHH3_k127_3125690_19 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000000000000002267 211.0
YHH3_k127_3125690_2 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 5.215e-272 859.0
YHH3_k127_3125690_20 PFAM thioredoxin domain K05838 - - 0.0000000000000000000000000000000000000000000000000000000008518 211.0
YHH3_k127_3125690_21 Outer membrane protein Omp28 - - - 0.00000000000000000000000000000000000000000000000000000008726 204.0
YHH3_k127_3125690_22 Thioredoxin - - - 0.000000000000000000000000000000000000000000000000000000874 196.0
YHH3_k127_3125690_23 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000000000000000000000000006186 185.0
YHH3_k127_3125690_24 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000000000719 180.0
YHH3_k127_3125690_25 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000007743 173.0
YHH3_k127_3125690_26 Lipase (class 2) - - - 0.000000000000000000000000000000000000001153 163.0
YHH3_k127_3125690_27 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000003884 143.0
YHH3_k127_3125690_28 Thioredoxin - - - 0.0000000000000000000000000000000469 133.0
YHH3_k127_3125690_29 Lipopolysaccharide-assembly, LptC-related - - - 0.000000000000000000000002258 109.0
YHH3_k127_3125690_3 Endoribonuclease that initiates mRNA decay K18682 - - 7.515e-254 792.0
YHH3_k127_3125690_30 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000004238 99.0
YHH3_k127_3125690_31 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000002521 80.0
YHH3_k127_3125690_32 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000001684 73.0
YHH3_k127_3125690_33 belongs to the glycosyl hydrolase 13 family - - - 0.0000002191 61.0
YHH3_k127_3125690_4 Dihydrolipoyl dehydrogenase K00382 - 1.8.1.4 7.512e-237 738.0
YHH3_k127_3125690_5 - - - - 4.7e-207 658.0
YHH3_k127_3125690_6 4Fe-4S binding domain - - - 4.292e-196 624.0
YHH3_k127_3125690_7 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003058 574.0
YHH3_k127_3125690_8 PFAM PSP1 C-terminal conserved region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 481.0
YHH3_k127_3125690_9 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003666 451.0
YHH3_k127_3164565_0 COGs COG0471 Di- and tricarboxylate transporter - - - 7.432e-195 624.0
YHH3_k127_3164565_1 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007954 370.0
YHH3_k127_3164565_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 314.0
YHH3_k127_3164565_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007292 313.0
YHH3_k127_3164565_4 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0000000000000000000000000000000000000001956 156.0
YHH3_k127_3164565_5 Thermolysin metallopeptidase, alpha-helical domain K01400 - 3.4.24.28 0.0003168 53.0
YHH3_k127_3191002_0 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005339 473.0
YHH3_k127_3191002_1 ATPases associated with a variety of cellular activities K02010,K02017,K10112,K11076 - 3.6.3.29,3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000002709 265.0
YHH3_k127_3191002_2 4 iron, 4 sulfur cluster binding - - - 0.0000000000000000000000000000000000000000000000000000000000000002899 227.0
YHH3_k127_3191002_3 Binding-protein-dependent transport system inner membrane component K02054 - - 0.00000000000000000000000000000000000000000000000000000000000000672 226.0
YHH3_k127_3191002_4 Binding-protein-dependent transport system inner membrane component K02053 - - 0.0000000000000000000000000000000000000000000000000000000111 208.0
YHH3_k127_3191002_5 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000000000000000000000000000002373 189.0
YHH3_k127_3211047_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003971 434.0
YHH3_k127_3211047_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008858 261.0
YHH3_k127_3215532_0 Fibrobacter succinogenes major domain (Fib_succ_major) - - - 0.000000000000000000000000000000000000000000001453 178.0
YHH3_k127_3215532_1 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.00000000000000000000001742 100.0
YHH3_k127_3215532_2 - - - - 0.0000000000000001793 91.0
YHH3_k127_3233616_0 PFAM ASPIC and UnbV - - - 0.0 1035.0
YHH3_k127_3233616_1 Domain in cystathionine beta-synthase and other proteins. - - - 1.013e-265 835.0
YHH3_k127_3233616_2 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003472 594.0
YHH3_k127_3233616_3 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 384.0
YHH3_k127_3233616_4 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 295.0
YHH3_k127_3233616_5 PFAM ASPIC and UnbV - - - 0.0000000000000000000000000000000000000001593 156.0
YHH3_k127_3233616_6 GtrA-like protein - - - 0.0000000000000000000000000007424 117.0
YHH3_k127_3315424_0 amino acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 420.0
YHH3_k127_3315424_1 PDZ DHR GLGF domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 353.0
YHH3_k127_3315424_2 Domain of unknown function (DUF1905) - - - 0.000000000000000000000000000000000000000000000000000000000000000005343 228.0
YHH3_k127_3315424_3 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000004696 161.0
YHH3_k127_3315424_4 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000000000000004867 139.0
YHH3_k127_3315424_5 - - - - 0.0000000007917 63.0
YHH3_k127_3315424_6 Tetratricopeptide repeat - - - 0.00000002191 66.0
YHH3_k127_3315424_7 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.000000175 63.0
YHH3_k127_3315424_8 leucine- rich repeat protein - - - 0.0007856 46.0
YHH3_k127_3316850_0 Peptidase family M49 - - - 6.313e-237 744.0
YHH3_k127_3316850_1 PUA domain containing protein K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 428.0
YHH3_k127_3316850_2 chlorophyll binding K03640 - - 0.000000000000000000000000000000000000000000000000000000000000001775 227.0
YHH3_k127_3316850_3 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000001956 196.0
YHH3_k127_336949_0 RNA-binding PUA-like domain of methyltransferase RsmF - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 347.0
YHH3_k127_336949_1 Belongs to the UbiD family K03182 - 4.1.1.98 0.000000000000000000000000000000000001767 139.0
YHH3_k127_3380464_0 ABC-type Na efflux pump, permease component K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005359 399.0
YHH3_k127_3380464_1 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 374.0
YHH3_k127_3380464_2 lipid kinase, YegS Rv2252 BmrU family - - - 0.0000000000000000000000000000000000000000001296 171.0
YHH3_k127_3380464_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000009954 158.0
YHH3_k127_3394540_0 Belongs to the glycosyl hydrolase 13 family K21575 - 3.2.1.135 9.409e-196 628.0
YHH3_k127_3394540_1 peptidase, M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007733 289.0
YHH3_k127_3394540_2 Putative esterase - - - 0.000000000000000000002766 96.0
YHH3_k127_347587_0 Belongs to the glycosyl hydrolase 30 family K01201 - 3.2.1.45 4.873e-239 746.0
YHH3_k127_347587_1 COG2211 Na melibiose symporter and related K03292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006706 493.0
YHH3_k127_3499839_0 ASPIC and UnbV - - - 0.000000000000005437 91.0
YHH3_k127_3500741_0 - - - - 0.0 1334.0
YHH3_k127_3500741_1 hydrolase, family 16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008864 341.0
YHH3_k127_350383_0 Y_Y_Y domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002274 291.0
YHH3_k127_350383_1 PFAM Y_Y_Y domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001832 283.0
YHH3_k127_350383_2 xylan catabolic process K03932 - - 0.00000000000000000000001661 104.0
YHH3_k127_3508400_0 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 499.0
YHH3_k127_3512186_0 peptidase M24 K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004856 543.0
YHH3_k127_3512186_1 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000211 156.0
YHH3_k127_3512186_2 PFAM Transglycosylase-associated protein - - - 0.0000000000000000003835 89.0
YHH3_k127_3527259_0 domain, Protein K20276 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 497.0
YHH3_k127_3527259_1 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 413.0
YHH3_k127_3527259_2 TIGRFAM TIGR02453 family protein - - - 0.000000000000000000000000000000000000000000000000000000000002636 216.0
YHH3_k127_3573130_0 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005918 563.0
YHH3_k127_3573130_1 PFAM Kelch motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 369.0
YHH3_k127_3573130_2 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006601 389.0
YHH3_k127_3573130_3 YeeE YedE family K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000003636 237.0
YHH3_k127_3573130_4 - - - - 0.00000000000000000000000000000000000000000000000000000000002078 214.0
YHH3_k127_3573130_5 PFAM YeeE YedE family (DUF395) K07112 - - 0.000000000000000000000000000000000000000000000000001235 185.0
YHH3_k127_3573130_6 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000006407 130.0
YHH3_k127_3573130_7 metallopeptidase activity - - - 0.0000000000433 78.0
YHH3_k127_3605966_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 316.0
YHH3_k127_3605966_1 Bacterial PH domain K08981 - - 0.000000000000000000000000000002263 132.0
YHH3_k127_3605966_2 Bacterial PH domain K09167 - - 0.000000000000000000000002068 109.0
YHH3_k127_3606466_0 PFAM NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000007079 261.0
YHH3_k127_3606466_1 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000183 209.0
YHH3_k127_3606466_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000941 169.0
YHH3_k127_3606466_3 - - - - 0.000000000000000000000000000000000001571 141.0
YHH3_k127_3606466_4 Pyridoxal-dependent decarboxylase conserved domain - - - 0.00000000000001386 74.0
YHH3_k127_360653_0 Domain of unknown function DUF11 - - - 0.00000000000000000000000000000004385 145.0
YHH3_k127_3608417_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005751 334.0
YHH3_k127_3608417_1 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.00000000000000000000000000000000000003098 144.0
YHH3_k127_3608417_2 Uncharacterized protein conserved in bacteria (DUF2141) - - - 0.0000000000000000004639 92.0
YHH3_k127_3635066_0 Leucyl aminopeptidase K19701 - 3.4.11.10,3.4.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 344.0
YHH3_k127_3635066_1 PFAM BNR Asp-box repeat - - - 0.0000000000000000000000000000000000000000000000000008245 187.0
YHH3_k127_3635066_2 xyloglucan:xyloglucosyl transferase activity - - - 0.00000000000000000000000000000000000000009172 167.0
YHH3_k127_3635066_3 Fibrobacter succinogenes major domain (Fib_succ_major) - - - 0.00000000000000000008793 102.0
YHH3_k127_3645262_0 Histidine kinase K19694 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003529 427.0
YHH3_k127_3645262_2 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000002075 194.0
YHH3_k127_3654996_0 DNA segregation ATPase FtsK SpoIIIE and related K03466 - - 1.176e-265 841.0
YHH3_k127_3654996_1 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 1.829e-251 779.0
YHH3_k127_3654996_10 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 289.0
YHH3_k127_3654996_11 outer membrane assembly lipoprotein YfiO K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000002677 241.0
YHH3_k127_3654996_12 Domain of unknown function (DUF4835) - - - 0.000000000000000000000000000000000000000000000000000000000000000004724 237.0
YHH3_k127_3654996_14 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000001039 198.0
YHH3_k127_3654996_15 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000000000002106 190.0
YHH3_k127_3654996_16 PFAM Outer membrane lipoprotein carrier protein LolA K03634 - - 0.000000000000000000000000000000000000000000001195 173.0
YHH3_k127_3654996_17 RNA polymerase - - - 0.000000000000000000000000000000000003874 139.0
YHH3_k127_3654996_18 IMP dehydrogenase activity K04767,K07182 - - 0.000000000000000000000000000000009863 131.0
YHH3_k127_3654996_19 1-aminocyclopropane-1-carboxylate deaminase K01505 - 3.5.99.7 0.00000000000000000000000000000001629 138.0
YHH3_k127_3654996_2 ABC transporter K06147,K11085 - - 7.039e-220 697.0
YHH3_k127_3654996_20 protein-disulfide reductase activity K01286,K07258 - 3.4.16.4 0.0000000000000000007618 96.0
YHH3_k127_3654996_3 PFAM GH3 auxin-responsive promoter - - - 7.526e-211 666.0
YHH3_k127_3654996_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 534.0
YHH3_k127_3654996_5 PFAM Amidohydrolase family K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000992 504.0
YHH3_k127_3654996_6 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004858 481.0
YHH3_k127_3654996_7 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007956 452.0
YHH3_k127_3654996_8 SPTR CHU large protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003665 470.0
YHH3_k127_3654996_9 Saccharopine dehydrogenase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 414.0
YHH3_k127_3660244_0 COGs COG4995 conserved - - - 0.000000000000000008685 85.0
YHH3_k127_3746462_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 5.79e-317 979.0
YHH3_k127_3746462_1 Two component regulator propeller domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000914 589.0
YHH3_k127_3746462_10 rod shape-determining protein MreD - - - 0.00000000000000000000000000000001163 133.0
YHH3_k127_3746462_11 D-alanyl-D-alanine carboxypeptidase - - - 0.000000000006395 70.0
YHH3_k127_3746462_2 Cell shape determining protein MreB Mrl K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 565.0
YHH3_k127_3746462_3 N-acetyl-alpha-D-glucosaminyl L-malate synthase K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 556.0
YHH3_k127_3746462_4 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005159 517.0
YHH3_k127_3746462_5 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 417.0
YHH3_k127_3746462_6 Peptidase M16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 369.0
YHH3_k127_3746462_7 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 298.0
YHH3_k127_3746462_8 MerR family K22491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000137 261.0
YHH3_k127_3746462_9 shape-determining protein MreC K03570 - - 0.000000000000000000000000000000000000000000000000000000001477 210.0
YHH3_k127_3768527_0 PFAM Peptidase C14, caspase catalytic - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005923 253.0
YHH3_k127_3768527_1 - - - - 0.00000000000000000000000000000000000000000000000000000000008128 208.0
YHH3_k127_3768527_2 Hep Hag repeat protein K01406,K21449 - 3.4.24.40 0.000000005422 68.0
YHH3_k127_377096_0 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000008343 244.0
YHH3_k127_377096_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000002676 238.0
YHH3_k127_3778593_0 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 1.994e-233 751.0
YHH3_k127_3778593_1 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 567.0
YHH3_k127_3778593_10 PFAM Peptidase, membrane zinc metallopeptidase K06973 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005458 293.0
YHH3_k127_3778593_11 Translation initiation inhibitor, yjgF family K15067 - 3.5.99.5 0.000000000000000000000000000000000000000000000000000000000000000004032 228.0
YHH3_k127_3778593_12 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000008026 201.0
YHH3_k127_3778593_14 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000002525 55.0
YHH3_k127_3778593_2 seryl-tRNA synthetase K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005678 541.0
YHH3_k127_3778593_3 Metal-dependent hydrolase K03392 - 4.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 529.0
YHH3_k127_3778593_4 Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid K00486 - 1.14.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000824 497.0
YHH3_k127_3778593_5 Tryptophan 2,3-dioxygenase K00453 - 1.13.11.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 486.0
YHH3_k127_3778593_6 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 344.0
YHH3_k127_3778593_7 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006844 338.0
YHH3_k127_3778593_8 short-chain dehydrogenase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008756 299.0
YHH3_k127_3778593_9 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002091 291.0
YHH3_k127_3925148_0 Protein of unknown function (DUF2723) - - - 0.0 1217.0
YHH3_k127_3925148_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 3.169e-241 756.0
YHH3_k127_3925148_10 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000000000000000000004623 213.0
YHH3_k127_3925148_11 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000006766 205.0
YHH3_k127_3925148_12 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000004465 201.0
YHH3_k127_3925148_13 PFAM Pseudouridine synthase, RsuA and RluB C D E F K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000001067 199.0
YHH3_k127_3925148_14 (HIT) family K02503 - - 0.00000000000000000000000000000000000000000000000396 175.0
YHH3_k127_3925148_15 Protein of unknown function (DUF4230) - - - 0.00000000000000000000000000000000000004932 150.0
YHH3_k127_3925148_16 Rhodanese Homology Domain K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000002622 102.0
YHH3_k127_3925148_2 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 545.0
YHH3_k127_3925148_3 amino acid peptide transporter K03305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007603 512.0
YHH3_k127_3925148_4 Outer membrane receptor K16087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 508.0
YHH3_k127_3925148_5 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006719 469.0
YHH3_k127_3925148_6 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 361.0
YHH3_k127_3925148_7 long-chain fatty acid transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 326.0
YHH3_k127_3925148_8 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005891 304.0
YHH3_k127_3925148_9 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000000000000000000003799 233.0
YHH3_k127_3927124_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 2.356e-221 706.0
YHH3_k127_3927124_1 Esterase of the alpha-beta hydrolase superfamily - - - 0.000000000000000000000000000000000000000000002092 186.0
YHH3_k127_3927124_10 iron ion homeostasis K04758 - - 0.0004795 46.0
YHH3_k127_3927124_2 protein conserved in bacteria (DUF2237) K09966 - - 0.00000000000000000000000000000000002346 139.0
YHH3_k127_3927124_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000001391 131.0
YHH3_k127_3927124_4 SdpI/YhfL protein family - - - 0.0000000000000000000002454 100.0
YHH3_k127_3927124_5 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000008476 87.0
YHH3_k127_3927124_6 Domain of unknown function (DUF4153) - - - 0.00000000000000001275 97.0
YHH3_k127_3927124_9 - - - - 0.0000008472 51.0
YHH3_k127_3935516_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 8.685e-288 898.0
YHH3_k127_3935516_1 PFAM Aminotransferase class I and II K00639 - 2.3.1.29 3.781e-202 636.0
YHH3_k127_3935516_2 Cystathionine beta-synthase K01697,K01738 - 2.5.1.47,4.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005648 392.0
YHH3_k127_3935516_3 Psort location Cytoplasmic, score 8.96 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 360.0
YHH3_k127_3935516_4 - - - - 0.000000000000000000000000000000008085 138.0
YHH3_k127_3950366_0 Cys/Met metabolism PLP-dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 450.0
YHH3_k127_3950366_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005898 311.0
YHH3_k127_3950366_2 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004341 280.0
YHH3_k127_3950366_3 Protein of unknown function (DUF721) - - - 0.000000001951 62.0
YHH3_k127_3954620_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 326.0
YHH3_k127_3954620_1 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.0000000000000000000000000000000000000000000000000000000000000000001312 232.0
YHH3_k127_3956053_0 SOUL heme-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004742 286.0
YHH3_k127_3956053_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000005711 231.0
YHH3_k127_3956053_2 phosphoglycerate mutase - - - 0.0000000000000000000000000000000000000000000000000000009537 199.0
YHH3_k127_3956053_3 Lipocalin / cytosolic fatty-acid binding protein family - - - 0.00000000000000000002579 91.0
YHH3_k127_3956053_4 - - - - 0.00000000000001811 75.0
YHH3_k127_3989792_0 beta-galactosidase activity - - - 0.0 1366.0
YHH3_k127_4020344_0 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005962 276.0
YHH3_k127_4020344_1 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001487 243.0
YHH3_k127_4020344_2 Belongs to the UPF0403 family - - - 0.00000000000000000000000000000000000000000000000000000000000003286 216.0
YHH3_k127_4020344_3 Cytochrome c - - - 0.00000000000000000001059 95.0
YHH3_k127_4022023_0 ABC transporter, ATP-binding protein K15738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005493 560.0
YHH3_k127_4022023_1 Nucleotidyltransferase domain K07075 - - 0.00000000000000000000001825 102.0
YHH3_k127_4030927_0 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 554.0
YHH3_k127_4030927_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000375 236.0
YHH3_k127_4030927_2 Ferric uptake regulator family K03711 - - 0.000000000000000000000000000000000000002179 151.0
YHH3_k127_4030927_3 Domain of unknown function (DUF4625) - - - 0.00000000000000000000000000000004851 137.0
YHH3_k127_4069369_0 cytochrome C peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 353.0
YHH3_k127_4073700_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 1.125e-244 787.0
YHH3_k127_4076354_0 glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005711 453.0
YHH3_k127_4076354_1 TIGRFAM N-terminal double-transmembrane domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 464.0
YHH3_k127_4076354_2 Dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 373.0
YHH3_k127_4076354_3 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000006307 186.0
YHH3_k127_4076354_4 Protein of unknown function (DUF4199) - - - 0.000000000000000000005394 99.0
YHH3_k127_4103395_0 protein involved in exopolysaccharide biosynthesis - - - 4.234e-320 1015.0
YHH3_k127_4103395_1 COG0308 Aminopeptidase N - - - 4.569e-315 981.0
YHH3_k127_4103395_2 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 437.0
YHH3_k127_4103395_3 phosphoesterase, PA-phosphatase related - - - 0.00000000000000000000000000000000000000001469 162.0
YHH3_k127_4103395_4 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA - - - 0.00000000000000000000000000000000000003182 147.0
YHH3_k127_4103395_5 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K04757 - 2.7.11.1 0.0000000000000000000000000000000000001308 145.0
YHH3_k127_4103395_6 Domain of unknown function (DUF4294) - - - 0.00000000000000001962 88.0
YHH3_k127_4105498_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 604.0
YHH3_k127_4105498_1 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003611 372.0
YHH3_k127_4105498_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003536 299.0
YHH3_k127_4105498_3 Doxx family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008354 298.0
YHH3_k127_4231319_0 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002903 315.0
YHH3_k127_4231319_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000005742 55.0
YHH3_k127_4257514_0 Glycosyl hydrolases family 17 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 517.0
YHH3_k127_4257514_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 443.0
YHH3_k127_4257514_2 Belongs to the glycosyl hydrolase 30 family K01201 - 3.2.1.45 0.000000000000000000000000000000000667 133.0
YHH3_k127_4258572_0 PFAM EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001294 276.0
YHH3_k127_4258572_1 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000003652 255.0
YHH3_k127_4258572_2 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000005886 202.0
YHH3_k127_4258572_3 Clp protease adaptor protein ClpS K06891 - - 0.0000000000000000000000000006376 115.0
YHH3_k127_4283505_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1062.0
YHH3_k127_4283505_1 2-methylthioadenine synthetase K18707 - 2.8.4.5 1.783e-205 647.0
YHH3_k127_4283505_2 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 402.0
YHH3_k127_4283505_3 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008026 296.0
YHH3_k127_4283505_4 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000003093 254.0
YHH3_k127_4283505_5 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000001963 112.0
YHH3_k127_4283505_6 Outer membrane protein beta-barrel domain - - - 0.000006082 55.0
YHH3_k127_4289837_0 Glutamate formimidoyltransferase K00603,K13990 - 2.1.2.5,4.3.1.4 1.301e-247 777.0
YHH3_k127_4289837_1 Belongs to the PdxA family K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003686 425.0
YHH3_k127_4289837_10 PFAM Yqey-like protein K09117 - - 0.000000000000000000000000000000000003763 141.0
YHH3_k127_4289837_11 PFAM regulatory protein TetR - - - 0.00000000000000000000000000006544 126.0
YHH3_k127_4289837_13 PFAM N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.0000000000001258 79.0
YHH3_k127_4289837_14 Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain K07374 GO:0001966,GO:0003008,GO:0003674,GO:0005198,GO:0005200,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0005874,GO:0006996,GO:0007010,GO:0007017,GO:0007600,GO:0007610,GO:0007638,GO:0008150,GO:0009581,GO:0009582,GO:0009605,GO:0009612,GO:0009628,GO:0009987,GO:0015630,GO:0016043,GO:0030424,GO:0031644,GO:0031646,GO:0032101,GO:0032103,GO:0032501,GO:0036477,GO:0040011,GO:0042330,GO:0042995,GO:0043005,GO:0043025,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044057,GO:0044297,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464,GO:0048518,GO:0048520,GO:0048583,GO:0048584,GO:0050789,GO:0050795,GO:0050877,GO:0050896,GO:0050906,GO:0050954,GO:0050974,GO:0050975,GO:0050976,GO:0050982,GO:0051239,GO:0051240,GO:0051606,GO:0051931,GO:0065007,GO:0071840,GO:0097458,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120025,GO:1905787,GO:1905789,GO:1905790,GO:1905792 - 0.0002065 44.0
YHH3_k127_4289837_15 Sulfatase-modifying factor enzyme 1 - - - 0.0005446 45.0
YHH3_k127_4289837_2 PFAM Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008517 399.0
YHH3_k127_4289837_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 377.0
YHH3_k127_4289837_4 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004243 355.0
YHH3_k127_4289837_5 Succinylglutamate desuccinylase / Aspartoacylase family K05526 - 3.5.1.96 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004361 327.0
YHH3_k127_4289837_6 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 315.0
YHH3_k127_4289837_7 glycosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001161 261.0
YHH3_k127_4289837_8 COG1705 Muramidase (flagellum-specific) - - - 0.00000000000000000000000000000000000000000000000000007812 193.0
YHH3_k127_4289837_9 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K07443 - 2.1.1.63 0.0000000000000000000000000000000000000002689 151.0
YHH3_k127_4292989_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278 - 3.4.14.5 7.78e-271 851.0
YHH3_k127_4292989_1 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000000000000000000000000002584 194.0
YHH3_k127_4292989_2 - - - - 0.00000000000000000000000000004295 123.0
YHH3_k127_4292989_3 - - - - 0.0000000000000000000005414 102.0
YHH3_k127_4292989_4 Protein conserved in bacteria - - - 0.0000000000000000006433 93.0
YHH3_k127_4299757_0 acetyl-CoA hydrolase transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008191 587.0
YHH3_k127_4299757_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000001113 222.0
YHH3_k127_4317918_0 protein-glutamate methylesterase activity K03412,K03413,K13924 - 2.1.1.80,3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008878 475.0
YHH3_k127_4317918_1 Sigma-54 interaction domain - - - 0.000000000000000000001678 96.0
YHH3_k127_4348273_0 TonB-dependent Receptor Plug Domain - - - 2.82e-320 1000.0
YHH3_k127_4348273_1 FAD-dependent dehydrogenase K07137 - - 1.645e-225 709.0
YHH3_k127_4348273_10 Tex-like protein N-terminal domain K06959 - - 0.000000000000000000000000000000000000000000000000000000000000000000009296 238.0
YHH3_k127_4348273_11 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000009216 242.0
YHH3_k127_4348273_12 Protein of unknown function, DUF547 - - - 0.0000000000000000000000000000000000000000000000000000000000006104 217.0
YHH3_k127_4348273_13 Etoposide-induced protein 2.4 (EI24) K06203 - - 0.0000000000000000000000000000000000000000000000000000000002761 211.0
YHH3_k127_4348273_14 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000006018 199.0
YHH3_k127_4348273_15 SURF4 family K15977 - - 0.000000000000000000000000000000000000000002369 164.0
YHH3_k127_4348273_2 potassium uptake protein, TrkH family K03498 - - 2.083e-212 674.0
YHH3_k127_4348273_3 Penicillin-binding Protein K05367 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 609.0
YHH3_k127_4348273_5 2-dehydro-3-deoxyphosphooctonate aldolase K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000815 398.0
YHH3_k127_4348273_6 COG0569 K transport systems NAD-binding component K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 334.0
YHH3_k127_4348273_7 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007524 326.0
YHH3_k127_4348273_8 Ion transport protein K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 318.0
YHH3_k127_4348273_9 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004928 299.0
YHH3_k127_4443028_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002708 580.0
YHH3_k127_4443028_1 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 355.0
YHH3_k127_4443028_2 uracil phosphoribosyltransferase K00761 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000005846 266.0
YHH3_k127_4443028_3 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000001531 178.0
YHH3_k127_4443028_4 Rhomboid family - - - 0.000000000000000000000000000006443 123.0
YHH3_k127_4465152_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 3.825e-253 799.0
YHH3_k127_4465152_1 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway K00351 - 1.6.5.8 1.66e-251 779.0
YHH3_k127_4465152_10 Putative prokaryotic signal transducing protein - - - 0.0000001163 55.0
YHH3_k127_4465152_2 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347 - 1.6.5.8 2.612e-201 633.0
YHH3_k127_4465152_3 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003323 597.0
YHH3_k127_4465152_4 OmpA MotB domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 467.0
YHH3_k127_4465152_5 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00350 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009186 348.0
YHH3_k127_4465152_6 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00349 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 349.0
YHH3_k127_4465152_7 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00348 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000001679 267.0
YHH3_k127_4465152_8 nicotinamide mononucleotide transporter K03811 - - 0.00000000000000000000000000000000005123 141.0
YHH3_k127_4465152_9 apolipoprotein N-acyltransferase K03820 - - 0.000000000000000000004398 100.0
YHH3_k127_4471868_0 STAS domain K03321 - - 2.456e-228 717.0
YHH3_k127_4471868_1 Rossmann-like domain K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 299.0
YHH3_k127_4471868_2 Peroxiredoxin K04063 - - 0.0000000000000000000000000000000000000000000000000007893 186.0
YHH3_k127_4502901_0 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007591 398.0
YHH3_k127_4502901_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 301.0
YHH3_k127_4502901_2 DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006428 291.0
YHH3_k127_4523940_0 peptidase S9 prolyl oligopeptidase active site domain protein - - - 3.565e-241 778.0
YHH3_k127_4523940_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 537.0
YHH3_k127_4523940_2 methylglyoxal synthase K01734 - 4.2.3.3 0.000000000000000000000000000000000000000000000000005418 183.0
YHH3_k127_4690563_2 arylsulfatase activity - - - 0.00001435 50.0
YHH3_k127_4693639_0 sodium ion-translocating decarboxylase, beta subunit K01572 - 4.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004073 574.0
YHH3_k127_4693639_1 Arginine deiminase K01478 - 3.5.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 542.0
YHH3_k127_4693639_10 - - - - 0.000000000000000000000000000000000007761 144.0
YHH3_k127_4693639_11 TonB family domain protein - - - 0.000000000000000000000000000006176 125.0
YHH3_k127_4693639_12 COG5016 Pyruvate oxaloacetate carboxyltransferase K01960 - 6.4.1.1 0.000000000000000000003089 94.0
YHH3_k127_4693639_2 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 464.0
YHH3_k127_4693639_3 Phage shock protein A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 439.0
YHH3_k127_4693639_4 translation release factor activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006763 305.0
YHH3_k127_4693639_5 Small-conductance mechanosensitive channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006388 290.0
YHH3_k127_4693639_6 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002049 271.0
YHH3_k127_4693639_7 ribonuclease BN K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000142 261.0
YHH3_k127_4693639_8 Molecular chaperone DnaK - - - 0.00000000000000000000000000000000000000000000000001944 186.0
YHH3_k127_4693639_9 thioesterase K07107 - - 0.00000000000000000000000000000000000000006133 154.0
YHH3_k127_4699091_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 4.8e-313 974.0
YHH3_k127_4699091_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009661 445.0
YHH3_k127_4699091_2 chorismate mutase K04516 - 5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 391.0
YHH3_k127_4699091_3 PFAM MazG nucleotide pyrophosphohydrolase K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003138 379.0
YHH3_k127_4699091_4 Phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008085 360.0
YHH3_k127_4699091_5 GTP cyclohydrolase II - - - 0.000000000000000000000000000000000000000000000000000000000000000007599 229.0
YHH3_k127_4699091_7 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000004017 118.0
YHH3_k127_4722186_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 3.735e-232 727.0
YHH3_k127_4722186_1 PhoQ Sensor K01768,K16923,K19694 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004686 560.0
YHH3_k127_4722186_2 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000529 316.0
YHH3_k127_4722186_3 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003967 280.0
YHH3_k127_4722186_4 Eukaryotic integral membrane protein (DUF1751) K09650 - 3.4.21.105 0.000000000000000000000000000000000000000000000000000000003927 205.0
YHH3_k127_4722186_5 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.00000000000000000000000000000000000000000009561 165.0
YHH3_k127_4722186_6 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000217 172.0
YHH3_k127_4736167_0 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004215 374.0
YHH3_k127_4736167_1 Transglutaminase-like superfamily - - - 0.000000001134 65.0
YHH3_k127_4892758_0 of the AAA class - - - 0.0 1157.0
YHH3_k127_4892758_1 Domain of unknown function (DUF389) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 550.0
YHH3_k127_4892758_2 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000002462 214.0
YHH3_k127_4892758_3 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.000000000000000000000000000000000000000000000000000003738 192.0
YHH3_k127_4892758_4 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000000007431 188.0
YHH3_k127_4892758_5 FeS assembly protein IscX - - - 0.0000000000000000000000000000000000000000004788 157.0
YHH3_k127_4892758_6 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000001398 103.0
YHH3_k127_4892758_7 Methyltransferase domain - - - 0.0000000000000000005967 97.0
YHH3_k127_4945030_0 NADPH quinone reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003496 260.0
YHH3_k127_4945030_1 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001504 252.0
YHH3_k127_4945030_2 Domain of unknown function (DUF4386) - - - 0.000000000000000000000000000000000000000000000000000005717 202.0
YHH3_k127_4945030_3 - - - - 0.0000000000000000000000000000000002458 139.0
YHH3_k127_4945030_4 - - - - 0.0000000000000000003795 88.0
YHH3_k127_4945030_5 - - - - 0.0000671 52.0
YHH3_k127_4945030_6 PFAM Pentapeptide repeats (8 copies) - - - 0.0008703 43.0
YHH3_k127_4947060_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000234 231.0
YHH3_k127_4947060_1 C-terminal domain of CHU protein family - - - 0.00000003262 63.0
YHH3_k127_5040017_0 Retinal pigment epithelial membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000487 348.0
YHH3_k127_5040017_1 Histidine kinase - - - 0.00000000000000000000000000000000000000002115 167.0
YHH3_k127_5055354_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 3.449e-227 711.0
YHH3_k127_5055354_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 1.078e-194 615.0
YHH3_k127_5055354_10 transcriptional regulator K10947 - - 0.0000000000000000000000000000000000000002449 151.0
YHH3_k127_5055354_11 PFAM Tetratricopeptide - - - 0.000000000000000000000000000000000003918 156.0
YHH3_k127_5055354_12 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000008063 128.0
YHH3_k127_5055354_13 PFAM zinc finger SWIM domain protein - - - 0.0000000000000000000000000004634 125.0
YHH3_k127_5055354_14 Domain of unknown function (DUF4292) - - - 0.00000000000975 75.0
YHH3_k127_5055354_2 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 569.0
YHH3_k127_5055354_3 PhoD-like phosphatase, N-terminal domain K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 483.0
YHH3_k127_5055354_4 Thermophilic metalloprotease (M29) K19689 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 412.0
YHH3_k127_5055354_5 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 330.0
YHH3_k127_5055354_6 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001023 290.0
YHH3_k127_5055354_7 PFAM PspC domain K03973 - - 0.00000000000000000000000000000000000000000000000000000000000002806 221.0
YHH3_k127_5055354_8 TIGRFAM histidinol phosphate phosphatase HisJ K04486 - 3.1.3.15 0.0000000000000000000000000000000000000000000000000000001355 205.0
YHH3_k127_5055354_9 Peptidase, M23 - - - 0.00000000000000000000000000000000000000000000000000000897 205.0
YHH3_k127_5065484_0 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 341.0
YHH3_k127_5065484_1 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family - - - 0.0000000000000000000000000000000000000000000000000000000007958 210.0
YHH3_k127_5065484_10 - - - - 0.0000000001397 64.0
YHH3_k127_5065484_11 AAA domain K10742 - 3.6.4.12 0.0000001901 54.0
YHH3_k127_5065484_2 PFAM RES domain - - - 0.0000000000000000000000000000000000000000000000008876 179.0
YHH3_k127_5065484_3 Protein of unknown function (DUF2805) - - - 0.00000000000000000000000000000002552 128.0
YHH3_k127_5065484_4 Protein of unknown function (DUF2384) - - - 0.0000000000000000000000000000001968 128.0
YHH3_k127_5065484_5 - - - - 0.00000000000000000000000000004413 121.0
YHH3_k127_5065484_6 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000001318 108.0
YHH3_k127_5065484_7 Endoribonuclease L-PSP - - - 0.00000000000000000000002418 104.0
YHH3_k127_5065484_8 - - - - 0.0000000000000000000008665 100.0
YHH3_k127_5065484_9 - - - - 0.00000000001134 72.0
YHH3_k127_5139751_0 acyl-CoA dehydrogenase - - - 8.782e-206 644.0
YHH3_k127_5139751_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 623.0
YHH3_k127_5139751_10 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.00000000000000000000000000000009932 126.0
YHH3_k127_5139751_11 Domain of unknown function (DUF4286) - - - 0.000000000000000000000000000001048 124.0
YHH3_k127_5139751_12 PFAM outer membrane chaperone Skp (OmpH) K06142 - - 0.0000000000000000000000002141 113.0
YHH3_k127_5139751_13 Sec-independent protein translocase protein TatA K03116 - - 0.0000000000000000004493 88.0
YHH3_k127_5139751_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 552.0
YHH3_k127_5139751_3 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 489.0
YHH3_k127_5139751_4 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 384.0
YHH3_k127_5139751_5 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 362.0
YHH3_k127_5139751_6 Gliding motility protein, GldB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002091 265.0
YHH3_k127_5139751_7 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000000000000000000000000000000000000000000003278 205.0
YHH3_k127_5139751_8 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000000002944 207.0
YHH3_k127_5139751_9 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000003207 190.0
YHH3_k127_5141691_0 Thermolysin metallopeptidase, catalytic domain K01400 - 3.4.24.28 1.185e-227 741.0
YHH3_k127_5141691_1 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 331.0
YHH3_k127_5141691_2 Glycosyl transferase, family 9 K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 317.0
YHH3_k127_5141691_3 - - - - 0.0002091 50.0
YHH3_k127_5159932_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1031.0
YHH3_k127_5159932_1 alpha-2-macroglobulin domain protein K06894 - - 1.622e-226 748.0
YHH3_k127_5159932_2 Glutamine amidotransferase class-I K01658,K01664 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000008443 184.0
YHH3_k127_5159932_3 Peptidase S16, lon domain protein K01338,K07157 - 3.4.21.53 0.00000000000000000000000000000000001324 143.0
YHH3_k127_5159932_4 PFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000007645 51.0
YHH3_k127_5173527_0 COG0330 Membrane protease subunits stomatin prohibitin homologs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005668 437.0
YHH3_k127_5173527_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000001002 107.0
YHH3_k127_5185211_0 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 1.122e-288 900.0
YHH3_k127_5185211_1 Caspase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 357.0
YHH3_k127_5185211_2 beta-galactosidase activity - - - 0.000000000000000000000000000000000000000000000000000000000001611 212.0
YHH3_k127_5185211_3 COG1680 Beta-lactamase class C and other penicillin binding K01286 - 3.4.16.4 0.0000000000000000000000000000000000000000000000001701 191.0
YHH3_k127_5185211_4 Trypsin-like serine protease - - - 0.0000000000000000000000000000000000000000001275 171.0
YHH3_k127_5185211_5 - - - - 0.00000000000000000000005964 104.0
YHH3_k127_5185211_6 Dodecin K09165 - - 0.0000000000000000003987 88.0
YHH3_k127_5185211_7 - - - - 0.000000000000000008133 97.0
YHH3_k127_5185211_8 Pyrrolo-quinoline quinone - - - 0.0000000004577 72.0
YHH3_k127_5185211_9 - - - - 0.000001017 58.0
YHH3_k127_522695_0 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 423.0
YHH3_k127_522695_1 regulator of chromosome condensation, RCC1 - - - 0.0000000000000000000000000001605 119.0
YHH3_k127_5278911_0 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000882 103.0
YHH3_k127_5278911_1 - - - - 0.00000000000000000001509 102.0
YHH3_k127_5325749_0 Carbon-nitrogen hydrolase K01501 - 3.5.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008365 477.0
YHH3_k127_5325749_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004804 396.0
YHH3_k127_5325749_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003227 265.0
YHH3_k127_5325749_3 PFAM LytTr DNA-binding region - - - 0.000000000000000000000000000000000006118 148.0
YHH3_k127_5325749_4 - - - - 0.000000000000000000000001427 116.0
YHH3_k127_535646_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 391.0
YHH3_k127_5380678_0 Molybdopterin oxidoreductase K07812,K08352 - 1.7.2.3,1.8.5.5 0.0 1610.0
YHH3_k127_5380678_1 serine-type peptidase activity K08676 - - 0.0 1418.0
YHH3_k127_5380678_10 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009137 373.0
YHH3_k127_5380678_11 COGs COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 340.0
YHH3_k127_5380678_12 Crp-like helix-turn-helix domain K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003404 298.0
YHH3_k127_5380678_13 mevalonate kinase activity K00869,K00938 - 2.7.1.36,2.7.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003423 280.0
YHH3_k127_5380678_14 Oxidoreductase FAD-binding domain K00523,K05784 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001843 269.0
YHH3_k127_5380678_15 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000000007131 221.0
YHH3_k127_5380678_16 SOS response associated peptidase (SRAP) - - - 0.0000000000000000000000000000000000000000000000000000000000001665 219.0
YHH3_k127_5380678_17 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000001112 176.0
YHH3_k127_5380678_18 PFAM Bacterial regulatory protein, arsR family K03892 - - 0.00000000000000000000000000000000000000000000000191 174.0
YHH3_k127_5380678_19 PFAM Phosphoribosyl transferase domain K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000002515 181.0
YHH3_k127_5380678_2 domain protein - - - 1.046e-238 745.0
YHH3_k127_5380678_20 Protein of unknown function (DUF1572) - - - 0.0000000000000000000000000000000000007801 144.0
YHH3_k127_5380678_21 Protein of unknown function (DUF983) - - - 0.000000000000000000000000000000001865 133.0
YHH3_k127_5380678_22 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03749 - - 0.0000000004379 68.0
YHH3_k127_5380678_3 4Fe-4S binding domain - - - 5.319e-228 717.0
YHH3_k127_5380678_4 COG0659 Sulfate permease and related K03321 - - 7.942e-213 675.0
YHH3_k127_5380678_5 STAS domain - - - 6.896e-198 634.0
YHH3_k127_5380678_6 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 552.0
YHH3_k127_5380678_7 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid K01823 - 5.3.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004954 409.0
YHH3_k127_5380678_8 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 378.0
YHH3_k127_5380678_9 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 378.0
YHH3_k127_5426770_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002009 611.0
YHH3_k127_5426770_1 Domain of unknown function (DUF4249) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 294.0
YHH3_k127_5426770_2 epimerase - - - 0.000000000000000000000000000000000000000000006958 171.0
YHH3_k127_5426770_3 TIGRFAM Gliding motility-associated protein, GldC - - - 0.0000000000000000000000000002264 117.0
YHH3_k127_5426770_4 TonB dependent receptor - - - 0.0000000000001549 70.0
YHH3_k127_5435067_0 Amidohydrolase family - - - 0.0 1043.0
YHH3_k127_544371_0 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007444 445.0
YHH3_k127_544371_1 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 341.0
YHH3_k127_544371_2 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000007042 177.0
YHH3_k127_548061_0 in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005214 435.0
YHH3_k127_548061_1 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002757 263.0
YHH3_k127_548061_2 PFAM Cache K08738 - - 0.00000000000000000000000000000000000000000000000000000000002491 227.0
YHH3_k127_548061_3 Protein of unknown function (DUF4256) - - - 0.000000000000000000000000000000000000000000000000000003091 192.0
YHH3_k127_548061_4 mannose-6-phosphate isomerase - - - 0.000000000000000000000000000000000000000000002966 166.0
YHH3_k127_548061_5 - - - - 0.000000000000000000000000000000000000000000114 164.0
YHH3_k127_548061_6 Cache_2 - - - 0.0000000000000000004946 102.0
YHH3_k127_548061_7 Cache_2 - - - 0.00000001779 67.0
YHH3_k127_5513498_0 Putative porin - - - 0.00000000000000005497 95.0
YHH3_k127_5628603_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002114 480.0
YHH3_k127_5628603_1 TIGRFAM Orotidine 5'-phosphate decarboxylase, subfamily 2 K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 346.0
YHH3_k127_5628603_2 NifU-like domain - - - 0.0000000000000000000000000534 110.0
YHH3_k127_5650101_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 1.878e-225 717.0
YHH3_k127_5650101_1 PFAM Histone deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 341.0
YHH3_k127_5689510_0 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 336.0
YHH3_k127_5689510_1 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002613 260.0
YHH3_k127_5689510_2 SRPBCC domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000004924 205.0
YHH3_k127_5719352_0 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 382.0
YHH3_k127_5719352_1 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 349.0
YHH3_k127_5719352_2 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009053 332.0
YHH3_k127_5719352_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001324 278.0
YHH3_k127_5719352_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005549 258.0
YHH3_k127_5757426_0 Bacterial protein of unknown function (DUF839) K07093 - - 1.019e-206 661.0
YHH3_k127_5757426_1 cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003058 451.0
YHH3_k127_5757426_2 Two component regulator propeller - - - 0.00000000000000000000000000000014 143.0
YHH3_k127_5789541_0 homogentisate 12-dioxygenase K00451 - 1.13.11.5 1.875e-194 611.0
YHH3_k127_5789541_1 4-hydroxyphenylpyruvate dioxygenase K00457 - 1.13.11.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003279 587.0
YHH3_k127_5820714_0 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01537 - 3.6.3.8 0.0 1035.0
YHH3_k127_5820714_1 COGs COG0374 Ni Fe-hydrogenase I large subunit K06281 - 1.12.99.6 1e-323 995.0
YHH3_k127_5820714_2 COGs COG1740 Ni Fe-hydrogenase I small subunit K06282 - 1.12.99.6 9.964e-195 612.0
YHH3_k127_5820714_3 COGs COG1969 Ni Fe-hydrogenase I cytochrome b subunit K03620 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005634 359.0
YHH3_k127_5820714_4 COGs COG0680 Ni Fe-hydrogenase maturation factor K03605 - - 0.00000000000000000000000000000000000000000000000004325 183.0
YHH3_k127_5820714_5 COGs COG0375 Zn finger protein HypA HybF (possibly regulating hydrogenase expression) K04651 - - 0.000000000000000000000000008014 113.0
YHH3_k127_589528_0 AcrB/AcrD/AcrF family K07787,K15726 - - 0.0 1020.0
YHH3_k127_589528_1 ABC transporter K15738 - - 4.078e-291 902.0
YHH3_k127_589528_2 OmpA MotB domain protein K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 312.0
YHH3_k127_5914066_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 1.271e-286 887.0
YHH3_k127_5914066_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 2.981e-235 735.0
YHH3_k127_5914066_2 ATPase (AAA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 519.0
YHH3_k127_5914066_3 PFAM Shikimate dehydrogenase substrate binding K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000001508 248.0
YHH3_k127_5914066_4 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.00000000000000000000000000000000000000000001444 162.0
YHH3_k127_5914066_5 COGs COG1670 Acetyltransferase including N-acetylase of ribosomal protein - - - 0.0000000000000000000000000000000000009906 143.0
YHH3_k127_5914066_6 Preprotein translocase SecG subunit K03075 - - 0.000000000000000000000000000007044 120.0
YHH3_k127_5914066_7 Lipopolysaccharide-assembly - - - 0.000000000000000000000000004303 117.0
YHH3_k127_5914066_8 Proline dehydrogenase K00318 - - 0.00000000000000000000000007758 119.0
YHH3_k127_5973209_0 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006383 520.0
YHH3_k127_6095342_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1011.0
YHH3_k127_6095342_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 2.709e-253 802.0
YHH3_k127_6095342_2 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 410.0
YHH3_k127_6095342_3 Deoxycytidine triphosphate deaminase K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006291 301.0
YHH3_k127_6095342_4 PFAM WD domain, G-beta repeat - - - 0.00000000000000000000000000000000000000000000002432 183.0
YHH3_k127_6095342_5 Belongs to the P-Pant transferase superfamily - - - 0.00000000000000000000000000000000000000000001256 169.0
YHH3_k127_6095342_6 PFAM Rhodanese-like domain - - - 0.0000000000000000000000000002467 116.0
YHH3_k127_6095342_8 PASTA domain containing protein K01921,K08884,K12132 - 2.7.11.1,6.3.2.4 0.00000000000000001177 93.0
YHH3_k127_6109504_0 ribonuclease, Rne Rng family K08301 - - 8.207e-233 731.0
YHH3_k127_6109504_1 PFAM YicC-like family, N-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003496 276.0
YHH3_k127_6109504_2 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000001078 226.0
YHH3_k127_6109504_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000001077 224.0
YHH3_k127_6109504_4 Belongs to the bacterial histone-like protein family K03530 - - 0.00000000000000000000000000000000000000000000001617 172.0
YHH3_k127_6109504_5 protein affecting Mg2 Co2 transport K06195 - - 0.00000000000000000000000000000000000004072 146.0
YHH3_k127_6109504_6 metallopeptidase activity K09933 - - 0.00000000009771 70.0
YHH3_k127_6109504_7 - - - - 0.0000004165 51.0
YHH3_k127_6109504_8 - - - - 0.000002425 55.0
YHH3_k127_6109504_9 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000003583 49.0
YHH3_k127_6141848_0 Alpha-1,2-mannosidase - - - 0.0 1047.0
YHH3_k127_6141848_1 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 1.092e-198 654.0
YHH3_k127_6141848_2 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 561.0
YHH3_k127_6141848_3 Asparaginase K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 372.0
YHH3_k127_6141848_4 Glucose galactose transporter K02429 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 355.0
YHH3_k127_6141848_5 - - - - 0.00000000000000000000000000000000000182 144.0
YHH3_k127_6141848_6 META domain - - - 0.0000004031 58.0
YHH3_k127_615903_0 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 321.0
YHH3_k127_615903_1 C4-type zinc ribbon domain K07164 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006957 293.0
YHH3_k127_615903_2 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000134 302.0
YHH3_k127_615903_3 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000000000000000000000000000000000000004412 222.0
YHH3_k127_615903_4 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.0000000000000000000000000000000000000000000001319 172.0
YHH3_k127_615903_5 YceI-like domain - - - 0.0000000000000000000000001721 121.0
YHH3_k127_615903_6 metallopeptidase activity - - - 0.0000000000003682 82.0
YHH3_k127_615903_7 regulator of chromosome condensation, RCC1 - - - 0.0001237 54.0
YHH3_k127_6161723_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004873 597.0
YHH3_k127_6161723_1 AAA domain (dynein-related subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004808 485.0
YHH3_k127_6161723_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006147 265.0
YHH3_k127_6161723_4 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.00000000000000000000376 96.0
YHH3_k127_6161723_5 PFAM zinc finger SWIM domain protein - - - 0.0000000000000000006432 100.0
YHH3_k127_6193366_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 7.94e-205 644.0
YHH3_k127_6193366_1 peptidylprolyl isomerase K01802,K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009605 528.0
YHH3_k127_6193366_2 penicillin-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000478 287.0
YHH3_k127_6193366_3 Protein of unknown function (DUF3109) - - - 0.000000000000000000000000000000000000000000000000000004714 196.0
YHH3_k127_6193366_4 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000000002646 187.0
YHH3_k127_6193366_5 - - - - 0.0000000000000000000000000000000000000003352 158.0
YHH3_k127_6193366_6 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000001232 93.0
YHH3_k127_6193366_7 Bacterial PH domain K08981 - - 0.0000000002982 69.0
YHH3_k127_6193366_8 Psort location CytoplasmicMembrane, score - - - 0.0000003009 57.0
YHH3_k127_6195500_0 Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 9.944e-265 833.0
YHH3_k127_6239936_0 Selenocysteine lyase - - - 2.097e-231 726.0
YHH3_k127_6239936_1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840 - 5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003523 554.0
YHH3_k127_6239936_2 Cysteine desulfurase K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003635 407.0
YHH3_k127_6239936_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003958 404.0
YHH3_k127_6239936_4 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000005246 228.0
YHH3_k127_6239936_5 Phosphoesterase PA-phosphatase related K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000208 185.0
YHH3_k127_6239936_6 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000002247 159.0
YHH3_k127_6247279_0 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K00615 - 2.2.1.1 0.0 1028.0
YHH3_k127_6247279_1 GTP-binding protein TypA K06207 - - 2.936e-305 946.0
YHH3_k127_6247279_11 MraZ protein, putative antitoxin-like K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.0000000000000000000000000000000000000000000000007483 178.0
YHH3_k127_6247279_12 Protein of unknown function (DUF1573) - - - 0.000000000000000000000000000000000000006229 151.0
YHH3_k127_6247279_13 Cytochrome c - - - 0.00000000000000000000002074 103.0
YHH3_k127_6247279_14 Histidine kinase - - - 0.00000000000000009703 86.0
YHH3_k127_6247279_15 - - - - 0.000000000001889 71.0
YHH3_k127_6247279_2 COG2366 Protein related to penicillin acylase K01434 - 3.5.1.11 2.097e-197 642.0
YHH3_k127_6247279_3 Tex-like protein N-terminal domain K06959 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005177 578.0
YHH3_k127_6247279_4 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005412 522.0
YHH3_k127_6247279_5 cytochrome C peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008358 495.0
YHH3_k127_6247279_6 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 449.0
YHH3_k127_6247279_7 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008726 336.0
YHH3_k127_6247279_8 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 332.0
YHH3_k127_6247279_9 Belongs to the UPF0246 family K09861 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0033194,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:1901700 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002412 278.0
YHH3_k127_626664_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.00000000000000000001535 91.0
YHH3_k127_6282160_0 Isocitrate/isopropylmalate dehydrogenase K00031,K00052 - 1.1.1.42,1.1.1.85 3.109e-200 633.0
YHH3_k127_6282160_1 Neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000763 377.0
YHH3_k127_6282160_2 - - - - 0.000000000000000000008952 98.0
YHH3_k127_6282160_3 Helix-turn-helix XRE-family like proteins K07729 - - 0.00000000000000000001185 93.0
YHH3_k127_6282160_4 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000000000000002267 94.0
YHH3_k127_6300387_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.0 1202.0
YHH3_k127_6300387_1 Outer membrane protein assembly complex, YaeT protein K07277 - - 6.712e-314 985.0
YHH3_k127_6300387_10 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000004881 166.0
YHH3_k127_6300387_11 Predicted membrane protein (DUF2177) - - - 0.000000000000000000000000000000000000000002854 158.0
YHH3_k127_6300387_12 - - - - 0.00000000000000000000000000000000000000001009 157.0
YHH3_k127_6300387_13 OmpA MotB domain protein K02557 - - 0.000000000000000000000000004772 120.0
YHH3_k127_6300387_14 - - - - 0.00000000000000000000009189 102.0
YHH3_k127_6300387_15 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000001421 101.0
YHH3_k127_6300387_2 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K11381 - 1.2.4.4 3.618e-288 898.0
YHH3_k127_6300387_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 4.817e-228 712.0
YHH3_k127_6300387_4 PFAM GH3 auxin-responsive promoter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 532.0
YHH3_k127_6300387_5 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 404.0
YHH3_k127_6300387_6 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007128 317.0
YHH3_k127_6300387_7 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008222 278.0
YHH3_k127_6300387_8 IMG reference gene - - - 0.000000000000000000000000000000000000000000000000000000000000000002167 246.0
YHH3_k127_6300387_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000002952 226.0
YHH3_k127_6333303_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 378.0
YHH3_k127_6333303_1 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.00000000000000000000000000000000000000000000000000000000000000000000279 245.0
YHH3_k127_6361148_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 8.648e-296 939.0
YHH3_k127_6361148_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.342e-226 712.0
YHH3_k127_6361148_10 - - - - 0.00000000002085 69.0
YHH3_k127_6361148_2 fumarylacetoacetate (FAA) hydrolase K01555 - 3.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009698 559.0
YHH3_k127_6361148_3 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 502.0
YHH3_k127_6361148_4 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.00000000000000000000000000000000000000000000000000000000000001236 218.0
YHH3_k127_6361148_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000003029 225.0
YHH3_k127_6361148_6 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000001667 205.0
YHH3_k127_6361148_7 long-chain fatty acid transporting porin activity K06076 - - 0.0000000000000000000000000000000000000000000000001793 190.0
YHH3_k127_6361148_8 OmpA MotB domain protein - - - 0.0000000000000000000000000000000000008589 148.0
YHH3_k127_6361148_9 transcriptional regulator - - - 0.0000000000000000000000000004497 119.0
YHH3_k127_6397698_0 Cation transport protein K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 594.0
YHH3_k127_6397698_1 TrkA-N domain K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236 533.0
YHH3_k127_6397698_2 Iron-storage protein K02217 - 1.16.3.2 0.0000000000000000000000000000000000000000000000000000000000001616 216.0
YHH3_k127_6397698_3 Low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000000000494 176.0
YHH3_k127_641554_0 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000003146 258.0
YHH3_k127_641554_1 Catalyzes the hydrolysis of 1,4-dihydroxy-2-naphthoyl- CoA (DHNA-CoA) to 1,4-dihydroxy-2-naphthoate (DHNA) K19222 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016289,GO:0016787,GO:0016788,GO:0016790,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0061522,GO:0071704,GO:1901576,GO:1901661,GO:1901663 3.1.2.28 0.000000000000000000000000000000000000000001815 159.0
YHH3_k127_641554_2 Belongs to the ArsC family K00537 - 1.20.4.1 0.000000000000000000000000000000000007631 139.0
YHH3_k127_6432222_0 Part of a membrane complex involved in electron transport K03615 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 443.0
YHH3_k127_6432222_1 Part of a membrane complex involved in electron transport K03614 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 345.0
YHH3_k127_6432222_2 Part of a membrane complex involved in electron transport K03617 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007112 284.0
YHH3_k127_6432222_3 Part of a membrane complex involved in electron transport K03613 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003213 272.0
YHH3_k127_6432222_4 Part of a membrane complex involved in electron transport - - - 0.00000000000000000000000000000000000000000000000003642 186.0
YHH3_k127_6432222_5 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.00000000000000000000000000000000000000002871 169.0
YHH3_k127_6458409_0 Belongs to the glycosyl hydrolase 2 family K01192 - 3.2.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005391 624.0
YHH3_k127_6458409_1 amino acid racemase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 503.0
YHH3_k127_6458409_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 434.0
YHH3_k127_6458409_3 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009781 362.0
YHH3_k127_6458409_4 Tocopherol cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004611 349.0
YHH3_k127_6458409_5 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 329.0
YHH3_k127_6458409_6 Peptidase family M20/M25/M40 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007432 319.0
YHH3_k127_6540891_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1123.0
YHH3_k127_6540891_1 mevalonate kinase K00869 - 2.7.1.36 0.0000000000000000000000000000000000000000000000000008649 194.0
YHH3_k127_6592527_0 TIGRFAM NiFe hydrogenase maturation protein HypF K04656 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000928 400.0
YHH3_k127_6592527_1 COGs COG0378 Ni2 -binding GTPase involved in regulation of expression and maturation of urease and hydrogenase K04652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004927 305.0
YHH3_k127_6618954_0 DEAD DEAH box helicase K03724 - - 0.00000000000000000000000000000000000000000000006752 171.0
YHH3_k127_6618954_1 Concanavalin A-like lectin/glucanases superfamily - - - 0.00000000000000000000001958 117.0
YHH3_k127_6618954_2 Y_Y_Y domain - - - 0.00000000000785 66.0
YHH3_k127_66458_0 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004888 428.0
YHH3_k127_6970160_0 TonB-dependent Receptor Plug K02014 - - 0.00000000000000000000000000000005914 143.0
YHH3_k127_6970160_1 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.00000000000000000001667 92.0
YHH3_k127_7040423_0 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 5.5e-322 998.0
YHH3_k127_7040423_1 MaoC like domain K02618 - 1.2.1.91,3.3.2.12 1.867e-317 984.0
YHH3_k127_7040423_2 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004634 464.0
YHH3_k127_7040423_3 Enoyl-CoA hydratase/isomerase K13766 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 346.0
YHH3_k127_7040423_4 phenylacetic acid degradation protein K02614 - - 0.0001454 46.0
YHH3_k127_7094455_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1459.0
YHH3_k127_7094455_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 558.0
YHH3_k127_7094455_10 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002376 254.0
YHH3_k127_7094455_11 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4 0.00000000000000000000000000000000000000000000000000000000000002787 222.0
YHH3_k127_7094455_12 CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000004482 214.0
YHH3_k127_7094455_13 TM2 domain - - - 0.00000000000000000000000000000000000000000000000000000009127 203.0
YHH3_k127_7094455_14 TIGRFAM gliding motility-associated lipoprotein GldD - - - 0.000000000000000000000000000000000000000000000000000002031 198.0
YHH3_k127_7094455_15 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000001358 190.0
YHH3_k127_7094455_16 Single-stranded DNA-binding protein K03111 - - 0.0000000000000000000000000000000000000000000424 165.0
YHH3_k127_7094455_17 MazG nucleotide pyrophosphohydrolase domain - - - 0.0000000000000000000000000000000006663 134.0
YHH3_k127_7094455_18 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000074 136.0
YHH3_k127_7094455_19 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000008655 109.0
YHH3_k127_7094455_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 527.0
YHH3_k127_7094455_20 - - - - 0.0000000000000000001378 93.0
YHH3_k127_7094455_3 Transporter associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 434.0
YHH3_k127_7094455_4 Serine phosphatase RsbU regulator of sigma subunit K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 413.0
YHH3_k127_7094455_5 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000917 396.0
YHH3_k127_7094455_6 Belongs to the SEDS family K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 367.0
YHH3_k127_7094455_7 Permease, YjgP YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004778 340.0
YHH3_k127_7094455_8 TIGRFAM A G-specific adenine glycosylase K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005447 325.0
YHH3_k127_7094455_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003268 258.0
YHH3_k127_7187669_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 363.0
YHH3_k127_7199637_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 5.893e-316 982.0
YHH3_k127_7199637_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 522.0
YHH3_k127_7199637_2 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009814 379.0
YHH3_k127_7199637_3 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000001626 185.0
YHH3_k127_7199637_4 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000000169 87.0
YHH3_k127_7199637_5 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000000006565 72.0
YHH3_k127_7199637_6 Rhomboid family - - - 0.00000001132 58.0
YHH3_k127_7241314_0 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000931 331.0
YHH3_k127_7241314_1 COG0084 Mg-dependent DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006281 265.0
YHH3_k127_7241314_2 Biopolymer transport protein ExbD/TolR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001415 243.0
YHH3_k127_7241314_3 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000000000000000000000000000000000000000000000000000000000000000003887 234.0
YHH3_k127_7248907_0 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006731 275.0
YHH3_k127_7248907_1 transcription regulator containing HTH domain K18831 - - 0.00000000000000000000000000000000000000000000001015 173.0
YHH3_k127_7248907_2 hydrolase activity, acting on ester bonds - - - 0.00000000003306 75.0
YHH3_k127_7285623_0 Complex I intermediate-associated protein 30 (CIA30) - - - 0.0000002356 53.0
YHH3_k127_7295152_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1319.0
YHH3_k127_7295152_1 endonuclease I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001904 282.0
YHH3_k127_7295152_2 Zinc metalloprotease (Elastase) - - - 0.0002643 53.0
YHH3_k127_7342624_0 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 529.0
YHH3_k127_7342624_1 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005469 380.0
YHH3_k127_7342624_2 PFAM TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000000000000000000000000000000000002547 230.0
YHH3_k127_7404948_0 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 4.916e-312 976.0
YHH3_k127_7404948_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 3.058e-238 741.0
YHH3_k127_7404948_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 4.713e-207 667.0
YHH3_k127_7404948_3 ABC transporter K15738 - - 6.863e-200 640.0
YHH3_k127_7404948_4 Zinc-uptake complex component A periplasmic K09815,K11707 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 340.0
YHH3_k127_7404948_5 ATPases associated with a variety of cellular activities K11710,K19973 - 3.6.3.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007184 318.0
YHH3_k127_7404948_6 Iron dependent repressor, metal binding and dimerisation domain K03709 - - 0.00000000000000000000000000000000000000000000000000000000000000000002002 239.0
YHH3_k127_7404948_7 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000002485 191.0
YHH3_k127_7404948_8 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000001303 120.0
YHH3_k127_7404948_9 - - - - 0.000000000000000000000001064 109.0
YHH3_k127_742010_0 with chaperone activity ATP-binding subunit K03696 - - 0.0 1209.0
YHH3_k127_742010_1 cytochrome c oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 614.0
YHH3_k127_742010_10 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.0000000000000000000000000000000000000000000000002055 184.0
YHH3_k127_742010_11 TIGRFAM cytochrome c oxidase, cbb3-type, subunit III K00406 - - 0.0000000000000000000000000000000000000000000000011 176.0
YHH3_k127_742010_12 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000000001021 171.0
YHH3_k127_742010_13 Protein of unknown function (DUF2795) - - - 0.000000000000000000000000000000000000007169 145.0
YHH3_k127_742010_14 Domain of unknown function (DUF1508) K09946 - - 0.00000000000000000000000000001371 121.0
YHH3_k127_742010_15 FixH - - - 0.00000000000000000000000003944 112.0
YHH3_k127_742010_16 - - - - 0.000000000000000000000007932 105.0
YHH3_k127_742010_17 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000003309 100.0
YHH3_k127_742010_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 581.0
YHH3_k127_742010_3 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 414.0
YHH3_k127_742010_4 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007948 293.0
YHH3_k127_742010_5 Pkd domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006335 301.0
YHH3_k127_742010_6 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000002366 261.0
YHH3_k127_742010_7 MarC family integral membrane protein K05595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004429 246.0
YHH3_k127_742010_8 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000006055 241.0
YHH3_k127_742010_9 transporter antisigma-factor antagonist STAS - - - 0.000000000000000000000000000000000000000000000000008601 183.0
YHH3_k127_7435155_0 DNA helicase K03657 - 3.6.4.12 3.643e-301 940.0
YHH3_k127_7435155_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 447.0
YHH3_k127_7435155_2 Glycosyl transferase family 2 K20534 - - 0.0000000000000000000000000000000000000000000000000000000000000000005588 234.0
YHH3_k127_7435155_3 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000000000000000000007253 190.0
YHH3_k127_7485179_0 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000007007 190.0
YHH3_k127_7485179_1 - - - - 0.000000000000000000000000000000000000001291 161.0
YHH3_k127_7485179_2 Serine kinase of the HPr protein, regulates carbohydrate metabolism - - - 0.000000000000000000000000002815 123.0
YHH3_k127_7485179_3 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.000000000000008892 77.0
YHH3_k127_7485179_4 - - - - 0.00000001861 60.0
YHH3_k127_7489430_0 Enoyl-(Acyl carrier protein) reductase K08081 - 1.1.1.206 0.00000000000000000000000000000000000000000000000000000000000000000000000000001785 266.0
YHH3_k127_7489430_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000008266 234.0
YHH3_k127_7489430_2 Modulates RecA activity K03565 - - 0.0000000000000000000000000000000000000000000003593 172.0
YHH3_k127_7489430_3 SusD family K21572 - - 0.0000000000000000000000000000000000004182 140.0
YHH3_k127_7489430_4 HAD-superfamily hydrolase subfamily IA, variant 3 K20866 - 3.1.3.10 0.000000000000000000000000000001825 130.0
YHH3_k127_7553296_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007596 505.0
YHH3_k127_7553296_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000006492 262.0
YHH3_k127_7558618_0 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000000000000000000006419 177.0
YHH3_k127_7558618_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000236 128.0
YHH3_k127_7558618_2 - - - - 0.00000000000000000001586 98.0
YHH3_k127_7596955_0 Animal haem peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 557.0
YHH3_k127_7596955_1 Beta-eliminating lyase K01667 - 4.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005221 434.0
YHH3_k127_7596955_2 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001078 233.0
YHH3_k127_7596955_3 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000000000000000000000000000000000000000000000001133 223.0
YHH3_k127_7596955_4 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000001337 171.0
YHH3_k127_7596955_5 Domain of unknown function (DUF4440) - - - 0.00000000000000000000000000001124 124.0
YHH3_k127_7596955_6 DNA integration - - - 0.0000003716 51.0
YHH3_k127_760087_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1103.0
YHH3_k127_760087_1 PKD domain containing protein - - - 5.02e-246 781.0
YHH3_k127_760087_10 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001991 286.0
YHH3_k127_760087_11 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002631 250.0
YHH3_k127_760087_12 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000001255 235.0
YHH3_k127_760087_13 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000008068 182.0
YHH3_k127_760087_14 Pfam Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000001151 153.0
YHH3_k127_760087_16 Belongs to the SUA5 family K07566 - 2.7.7.87 0.000000000000000000000001108 111.0
YHH3_k127_760087_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 612.0
YHH3_k127_760087_20 amine dehydrogenase activity - - - 0.0003338 46.0
YHH3_k127_760087_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 533.0
YHH3_k127_760087_4 Peptidase M1 K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 546.0
YHH3_k127_760087_5 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 409.0
YHH3_k127_760087_6 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 372.0
YHH3_k127_760087_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 363.0
YHH3_k127_760087_8 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 327.0
YHH3_k127_760087_9 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 286.0
YHH3_k127_7656979_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - 7.447e-274 850.0
YHH3_k127_7656979_1 COGs COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007179 467.0
YHH3_k127_7656979_2 Belongs to the methyltransferase superfamily K07444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 320.0
YHH3_k127_7656979_3 GlcNAc-PI de-N-acetylase K01463 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002312 283.0
YHH3_k127_7656979_4 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000006 269.0
YHH3_k127_7656979_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000456 175.0
YHH3_k127_7656979_6 Electron transfer flavoprotein K03521 - - 0.000000000000000000000000002702 112.0
YHH3_k127_7656979_7 photosynthesis - - - 0.000000000000000000000007612 105.0
YHH3_k127_7673159_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 1.124e-212 667.0
YHH3_k127_7673159_1 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000000000003764 202.0
YHH3_k127_7673159_2 chlorophyll binding - - - 0.0000000000000009258 89.0
YHH3_k127_7673159_3 Redoxin - - - 0.00000000000003289 87.0
YHH3_k127_7673159_4 SMART cellulose binding type IV - - - 0.00000003404 67.0
YHH3_k127_7684986_0 PFAM Pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 574.0
YHH3_k127_7684986_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 514.0
YHH3_k127_7684986_2 PFAM LysR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 364.0
YHH3_k127_7684986_3 Na+-dependent bicarbonate transporter superfamily K07086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 364.0
YHH3_k127_7684986_4 - - - - 0.000001136 55.0
YHH3_k127_7685950_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 460.0
YHH3_k127_7685950_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 365.0
YHH3_k127_7685950_2 - - - - 0.0000000000000000000000000000009115 130.0
YHH3_k127_7812820_0 PFAM TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004218 618.0
YHH3_k127_7812820_1 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006479 334.0
YHH3_k127_7812820_2 mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000000000000000000000000000000000000009563 237.0
YHH3_k127_7812820_3 Cytokinin riboside 5'-monophosphate phosphoribohydrolase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000003882 188.0
YHH3_k127_7812820_4 CHAP domain - - - 0.00000000000000000000000000000000000000001714 168.0
YHH3_k127_7813794_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K08314 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003051 371.0
YHH3_k127_7813794_1 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 306.0
YHH3_k127_7813794_2 PFAM Phosphorylase superfamily K00757 - 2.4.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000204 289.0
YHH3_k127_7813794_3 Pseudouridine synthase K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000003522 238.0
YHH3_k127_7813794_4 PFAM Acyl-protein synthetase, LuxE - - - 0.00000000000000000000000000000000000000000000000192 181.0
YHH3_k127_7813794_5 Arsenate reductase and related proteins, glutaredoxin family K00537 - 1.20.4.1 0.0000000000000000000000000000000001147 136.0
YHH3_k127_7897318_0 TonB-dependent receptor plug domain K02014 - - 0.0 1155.0
YHH3_k127_7897318_1 Carboxypeptidase regulatory-like domain - - - 5.773e-318 991.0
YHH3_k127_7897318_2 alpha beta - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 361.0
YHH3_k127_7897318_3 glycosyl transferase - - - 0.00000000000000000000000000000000000000000000000000000001084 209.0
YHH3_k127_7897318_4 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.000000000000000000005429 93.0
YHH3_k127_7938050_0 Protein of unknown function (DUF1295) - - - 0.000000000000000000000000000000000000000000000000000000000001379 217.0
YHH3_k127_7938050_1 CoA binding domain K06929 - - 0.0000000000000000000000000000000000001131 147.0
YHH3_k127_7938050_2 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000005809 132.0
YHH3_k127_7938050_3 - - - - 0.0000000588 56.0
YHH3_k127_7938050_4 Outer membrane protein beta-barrel domain - - - 0.00048 51.0
YHH3_k127_7951430_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.0 1222.0
YHH3_k127_7951430_1 Phenylacetic acid catabolic protein K02609 - 1.14.13.149 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006184 543.0
YHH3_k127_7951430_10 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000000000000004891 120.0
YHH3_k127_7951430_11 metallopeptidase activity - - - 0.000294 53.0
YHH3_k127_7951430_2 Dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009437 514.0
YHH3_k127_7951430_3 Oxidoreductase FAD-binding domain K02613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 408.0
YHH3_k127_7951430_4 Phenylacetic acid catabolic protein K02611 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004301 329.0
YHH3_k127_7951430_5 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003853 323.0
YHH3_k127_7951430_6 Pfam:DUF59 K02612 - - 0.00000000000000000000000000000000000000000000000000000000001809 213.0
YHH3_k127_7951430_7 Transcriptional regulator, TetR family - - - 0.00000000000000000000000000000000000000000000000001826 186.0
YHH3_k127_7951430_8 With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA K02610 - - 0.0000000000000000000000000000000000000000000002245 172.0
YHH3_k127_7951430_9 Gliding motility-associated C-terminal domain - - - 0.000000000000000000000000000000000000000001969 171.0
YHH3_k127_7966823_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1082.0
YHH3_k127_7966823_1 COG4206 Outer membrane cobalamin receptor protein K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009319 566.0
YHH3_k127_7966823_2 - - - - 0.00000000000000000000000000000000008629 138.0
YHH3_k127_7966823_3 - - - - 0.000000000000000000000000000000001936 139.0
YHH3_k127_7966823_4 Subtilase family - - - 0.000002295 54.0
YHH3_k127_7987887_0 COG5016 Pyruvate oxaloacetate carboxyltransferase K01960 - 6.4.1.1 6.664e-260 812.0
YHH3_k127_7987887_1 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 5.233e-203 637.0
YHH3_k127_7987887_10 4-hydroxybenzoate polyprenyltransferase K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006367 320.0
YHH3_k127_7987887_11 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000000000000000000000000000000000000000000000006423 199.0
YHH3_k127_7987887_12 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000004596 171.0
YHH3_k127_7987887_13 Protein of unknown function (DUF1573) - - - 0.0000000000000000000000000000000001317 138.0
YHH3_k127_7987887_14 CAAX amino terminal protease family K07052 - - 0.0000000000000000000000000000001395 134.0
YHH3_k127_7987887_15 - - - - 0.000000000000000000000000000002607 127.0
YHH3_k127_7987887_16 Type I restriction enzyme R protein N terminus (HSDR_N) - - - 0.00000000000000000007599 94.0
YHH3_k127_7987887_17 regulation of circadian rhythm K06919 - - 0.0000000000000000004046 103.0
YHH3_k127_7987887_18 Sodium pump decarboxylase gamma subunit K01573 - 4.1.1.3 0.0002902 47.0
YHH3_k127_7987887_2 Na H antiporter NhaD and related arsenite - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 542.0
YHH3_k127_7987887_3 DNA polymerase K02347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 540.0
YHH3_k127_7987887_4 potassium channel beta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 511.0
YHH3_k127_7987887_5 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 452.0
YHH3_k127_7987887_6 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 444.0
YHH3_k127_7987887_7 alpha beta - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007582 421.0
YHH3_k127_7987887_8 NAD-dependent epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006037 404.0
YHH3_k127_7987887_9 COGs COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 325.0
YHH3_k127_7999138_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 499.0
YHH3_k127_7999138_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009899 386.0
YHH3_k127_7999138_2 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000000000000000005645 205.0
YHH3_k127_7999138_3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000161 196.0
YHH3_k127_816460_0 PFAM Penicillin binding protein transpeptidase domain K05366 - 2.4.1.129,3.4.16.4 1.104e-249 792.0
YHH3_k127_816460_1 flavoprotein K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007924 457.0
YHH3_k127_816460_2 Phosphoesterase PA-phosphatase related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007534 386.0
YHH3_k127_816460_3 Releases the N-terminal proline from various substrates K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 330.0
YHH3_k127_816460_4 regulation of response to stimulus - - - 0.000000000000000000000000000000000000000000005738 189.0
YHH3_k127_816460_5 SPTR CHU large protein - - - 0.00000000000000000000000001618 128.0
YHH3_k127_8175642_0 GlcNAc-PI de-N-acetylase - - - 5.374e-281 886.0
YHH3_k127_8175642_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007336 338.0
YHH3_k127_8184955_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 4.117e-214 678.0
YHH3_k127_8184955_1 Inward rectifier potassium channel K08715 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004885 263.0
YHH3_k127_8184955_2 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000008661 219.0
YHH3_k127_8184955_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000341 109.0
YHH3_k127_8229596_0 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 485.0
YHH3_k127_8229596_1 Domain of unknown function (DUF4386) - - - 0.0000000000000000000000000000000000000000000000000000000001108 209.0
YHH3_k127_8229596_2 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000001558 149.0
YHH3_k127_8229596_3 Helix-turn-helix domain - - - 0.00000004314 55.0
YHH3_k127_8253056_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004936 517.0
YHH3_k127_8253056_1 PFAM Penicillin binding protein transpeptidase domain K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 517.0
YHH3_k127_8253056_2 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 494.0
YHH3_k127_8253056_3 amidohydrolase K20810 - 3.5.4.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006508 419.0
YHH3_k127_8253056_4 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004906 268.0
YHH3_k127_8253056_5 GSCFA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004369 251.0
YHH3_k127_8253056_6 Belongs to the GbsR family - - - 0.000000000000000000000000000000000000000000000000000000000001847 213.0
YHH3_k127_8253904_0 ABC transporter K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005114 610.0
YHH3_k127_8253904_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004307 571.0
YHH3_k127_8253904_10 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 0.00000000000000000000000000000000000004293 148.0
YHH3_k127_8253904_11 Psort location Cytoplasmic, score 8.96 K03589 - - 0.0000000000000000000000004689 114.0
YHH3_k127_8253904_12 MlaD protein K02067 - - 0.0000000000008375 69.0
YHH3_k127_8253904_2 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004171 569.0
YHH3_k127_8253904_3 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005821 542.0
YHH3_k127_8253904_4 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005187 524.0
YHH3_k127_8253904_5 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006572 479.0
YHH3_k127_8253904_6 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 434.0
YHH3_k127_8253904_7 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 396.0
YHH3_k127_8253904_8 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005636 359.0
YHH3_k127_8253904_9 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003963 359.0
YHH3_k127_8265505_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1169.0
YHH3_k127_8265505_1 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003009 505.0
YHH3_k127_8265505_2 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 368.0
YHH3_k127_8265505_3 Protein of unknown function (DUF3078) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004132 276.0
YHH3_k127_8265505_4 glucosamine N-acyltransferase K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000001693 180.0
YHH3_k127_8265505_5 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000001027 151.0
YHH3_k127_8265505_6 Alternative locus ID - - - 0.0001764 46.0
YHH3_k127_831509_0 PFAM TonB-dependent Receptor Plug K21573 - - 9.212e-258 827.0
YHH3_k127_831509_1 major facilitator K16211 - - 3.949e-229 719.0
YHH3_k127_831509_2 1,4-alpha-glucan branching enzyme activity K00700 - 2.4.1.18 1.338e-228 737.0
YHH3_k127_831509_3 abc-type fe3 -hydroxamate transport system, periplasmic component K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000043 607.0
YHH3_k127_831509_5 Nudix hydrolase K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000001396 168.0
YHH3_k127_83207_0 COGs COG4995 conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005427 311.0
YHH3_k127_83207_1 positive regulation of Ras protein signal transduction K19613 GO:0000164,GO:0002119,GO:0002164,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005886,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007264,GO:0007265,GO:0007275,GO:0007517,GO:0008150,GO:0008157,GO:0008287,GO:0008543,GO:0009719,GO:0009791,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010646,GO:0010647,GO:0010921,GO:0016020,GO:0017016,GO:0019208,GO:0019220,GO:0019222,GO:0019888,GO:0019899,GO:0019902,GO:0019903,GO:0023051,GO:0023052,GO:0023056,GO:0030234,GO:0031267,GO:0031323,GO:0031344,GO:0031399,GO:0031974,GO:0031981,GO:0032268,GO:0032501,GO:0032502,GO:0032991,GO:0035303,GO:0035304,GO:0035556,GO:0040025,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043666,GO:0044344,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046578,GO:0046579,GO:0048513,GO:0048518,GO:0048522,GO:0048569,GO:0048583,GO:0048584,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051020,GO:0051056,GO:0051057,GO:0051128,GO:0051171,GO:0051174,GO:0051246,GO:0051336,GO:0051716,GO:0060255,GO:0061061,GO:0065007,GO:0065009,GO:0070013,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071774,GO:0071944,GO:0080090,GO:0098772,GO:1902494,GO:1902531,GO:1902533,GO:1903293 - 0.00000000000000000000000000000000000000000000000000000306 218.0
YHH3_k127_83207_2 C-terminal of Roc, COR, domain - - - 0.000000000000000000000000000000000000000000004281 188.0
YHH3_k127_83207_3 Leucine rich repeat N-terminal domain - - - 0.00000000000000000000009827 115.0
YHH3_k127_83207_4 regulation of response to stimulus - - - 0.0000000003468 74.0
YHH3_k127_8325433_0 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 3.07e-215 672.0
YHH3_k127_8325433_1 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.0000000000000000000000000000000000000000000000000000000000001237 218.0
YHH3_k127_8325433_2 phosphoglycerate mutase family - - - 0.000000000000000000000000000000000000000000000000000000000003054 214.0
YHH3_k127_8334131_0 Part of a membrane complex involved in electron transport K03614 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 473.0
YHH3_k127_8334131_1 Part of a membrane complex involved in electron transport K03615 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 324.0
YHH3_k127_8334131_2 FMN binding K03612 - - 0.000000000000000000000000000000000000000000000000003362 193.0
YHH3_k127_8338652_0 Protein of unknown function (DUF1624) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004998 449.0
YHH3_k127_8338652_1 Glycosyl hydrolase family 47 - - - 0.0000000000000000000000000000000001227 137.0
YHH3_k127_8338652_2 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.00000000000001576 74.0
YHH3_k127_83566_0 protein required for cytochrome oxidase assembly K02259 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 444.0
YHH3_k127_83566_1 Belongs to the SOS response-associated peptidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001104 248.0
YHH3_k127_83566_2 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000002321 219.0
YHH3_k127_83566_3 MazG nucleotide pyrophosphohydrolase - - - 0.0000000000000000000000000000000000000000000003431 169.0
YHH3_k127_83566_4 Protease prsW family - - - 0.000000000000000000000008057 103.0
YHH3_k127_8359944_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 1.64e-214 673.0
YHH3_k127_8359944_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 1.764e-209 661.0
YHH3_k127_8373241_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003126 588.0
YHH3_k127_8373241_1 Immunoglobulin like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006914 532.0
YHH3_k127_8373241_2 - - - - 0.00000000134 61.0
YHH3_k127_8402620_0 TonB dependent receptor - - - 0.0 1243.0
YHH3_k127_8402620_1 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 370.0
YHH3_k127_8402620_2 Phytase K01083 - 3.1.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 312.0
YHH3_k127_8402620_3 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.00000000000000000000000000000000000000000000003487 175.0
YHH3_k127_8462872_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K17722 - 1.3.1.1 3.05e-311 960.0
YHH3_k127_8462872_1 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 300.0
YHH3_k127_8462872_2 PFAM Pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005555 281.0
YHH3_k127_8462872_3 Patatin-like phospholipase K07001 - - 0.0000355 46.0
YHH3_k127_8466519_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 1.252e-219 713.0
YHH3_k127_8476371_0 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II K01835 - 5.4.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007149 577.0
YHH3_k127_8476371_1 Fungalysin metallopeptidase (M36) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005458 568.0
YHH3_k127_8476371_2 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 432.0
YHH3_k127_8476371_3 nuclear chromosome segregation K02557,K18376 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007323 370.0
YHH3_k127_8476371_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000021 267.0
YHH3_k127_8476371_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002541 225.0
YHH3_k127_8476371_6 CarboxypepD_reg-like domain - - - 0.000000000000000000000000000000000000000000000000000000000008761 214.0
YHH3_k127_8476371_7 Acetyltransferase (GNAT) domain K02348 - - 0.00000000000000000000000000000000000000000000008721 173.0
YHH3_k127_8476371_8 Lamin Tail Domain - - - 0.00000000000000000000258 110.0
YHH3_k127_8476371_9 PFAM inositol monophosphatase K01082 - 3.1.3.7 0.0000000000001318 71.0
YHH3_k127_8483391_0 ABC-type multidrug transport system ATPase and permease K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 384.0
YHH3_k127_8530133_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1111.0
YHH3_k127_8553345_0 COGs COG1566 Multidrug resistance efflux pump K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005126 330.0
YHH3_k127_8553345_1 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004207 285.0
YHH3_k127_8553345_2 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000002542 211.0
YHH3_k127_8627714_0 PFAM Zinc carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 612.0
YHH3_k127_8627714_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 320.0
YHH3_k127_8627714_2 - - - - 0.0000000000001451 74.0
YHH3_k127_8629014_0 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008056 441.0
YHH3_k127_8629014_1 Putative rhamnosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000927 247.0
YHH3_k127_8721552_0 Protein of unknown function (DUF3500) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004537 397.0
YHH3_k127_8721552_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 312.0
YHH3_k127_8721552_2 GTP cyclohydrolase I K01495 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005156 285.0
YHH3_k127_8721552_3 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000000000004601 260.0
YHH3_k127_8721552_4 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000002757 218.0
YHH3_k127_8721552_5 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000001498 175.0
YHH3_k127_8721552_6 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000000000000000000000000000007427 173.0
YHH3_k127_8721552_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.000000000000000000000000000000000000000004688 169.0
YHH3_k127_8721552_8 Methyltransferase domain - - - 0.000000000000000000000000000000000003645 145.0
YHH3_k127_872545_0 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity K00821 GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 567.0
YHH3_k127_872545_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 320.0
YHH3_k127_872545_2 - - - - 0.000000000000000000000000000000000000000000000001026 177.0
YHH3_k127_872545_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000002261 113.0
YHH3_k127_872545_4 Domain of unknown function (DUF4287) - - - 0.0000000000002927 70.0
YHH3_k127_8791857_0 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 4.712e-201 635.0
YHH3_k127_8791857_1 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 312.0
YHH3_k127_8791857_10 - - - - 0.000000000002942 76.0
YHH3_k127_8791857_2 COG0657 Esterase lipase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001412 263.0
YHH3_k127_8791857_3 PFAM RNA polymerase sigma factor 70, region 4 type 2 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000003357 224.0
YHH3_k127_8791857_4 Type IX secretion system membrane protein PorP/SprF - - - 0.00000000000000000000000000000000000000000000000000000000000006314 225.0
YHH3_k127_8791857_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000006442 229.0
YHH3_k127_8791857_6 Immunoglobulin like - - - 0.0000000000000000000000000000000000000000000006853 182.0
YHH3_k127_8791857_8 - - - - 0.00000000000000000000000001661 122.0
YHH3_k127_8791857_9 long-chain fatty acid transport protein - - - 0.000000000000000035 94.0
YHH3_k127_8798795_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1060.0
YHH3_k127_8798795_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 489.0
YHH3_k127_8798795_2 Domain of unknown function (DUF5103) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002768 277.0
YHH3_k127_8798795_3 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001425 261.0
YHH3_k127_8798795_4 PFAM Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000000001648 236.0
YHH3_k127_8798795_5 Catalyzes the synthesis of activated sulfate K00860 GO:0003674,GO:0003824,GO:0004020,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237 2.7.1.25 0.000000000000000000000000000000000000000000000000000000000000001815 223.0
YHH3_k127_8798795_6 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.000000000000000000000000000000000000000000000000002085 190.0
YHH3_k127_8798795_7 DNA alkylation repair enzyme - - - 0.00000000000000000000000000000000000000000000001361 179.0
YHH3_k127_8798795_8 membrane protein (DUF2061) - - - 0.0000000000000000000006735 97.0
YHH3_k127_8800515_0 Carbohydrate family 9 binding domain-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004086 611.0
YHH3_k127_8800515_1 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 377.0
YHH3_k127_8800515_2 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004346 353.0
YHH3_k127_8821417_0 C-terminal domain of CHU protein family - - - 2.292e-288 913.0
YHH3_k127_8821417_1 Psort location CytoplasmicMembrane, score K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008814 328.0
YHH3_k127_8821417_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006402 326.0
YHH3_k127_8821417_3 Uncharacterized protein conserved in bacteria (DUF2179) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003244 297.0
YHH3_k127_8821417_4 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000001471 263.0
YHH3_k127_887934_0 Serine aminopeptidase, S33 K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006825 394.0
YHH3_k127_887934_1 Predicted membrane protein (DUF2207) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 382.0
YHH3_k127_887934_2 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000001297 232.0
YHH3_k127_887934_3 PFAM Transposase, Mutator family - - - 0.0000000000000000000151 92.0
YHH3_k127_8931664_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.054e-299 926.0
YHH3_k127_8931664_1 PFAM ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008763 607.0
YHH3_k127_8943237_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 6.765e-279 875.0
YHH3_k127_8943237_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005009 611.0
YHH3_k127_8943237_10 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000002167 150.0
YHH3_k127_8943237_11 Outer membrane protein beta-barrel domain - - - 0.000000000000000000001609 103.0
YHH3_k127_8943237_13 - - - - 0.0000003589 57.0
YHH3_k127_8943237_2 ABC 3 transport family K11708,K11709 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 481.0
YHH3_k127_8943237_3 Tetratricopeptide repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004597 390.0
YHH3_k127_8943237_4 D-isomer specific 2-hydroxyacid dehydrogenase K00018,K00058 - 1.1.1.29,1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 372.0
YHH3_k127_8943237_5 thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000735 302.0
YHH3_k127_8943237_6 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001283 294.0
YHH3_k127_8943237_7 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000144 295.0
YHH3_k127_8943237_8 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000003592 211.0
YHH3_k127_8943237_9 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000002553 185.0
YHH3_k127_8992102_0 Sortilin, neurotensin receptor 3, - - - 0.0 1230.0
YHH3_k127_8992102_1 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009382 431.0
YHH3_k127_8992102_2 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001444 258.0
YHH3_k127_9002108_0 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 618.0
YHH3_k127_9002108_1 Cleaves the N-terminal amino acid of tripeptides K01258 - 3.4.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 483.0
YHH3_k127_9002108_2 Alpha-2-Macroglobulin K06894 - - 0.00000000000000000000000000000000000000000001021 175.0
YHH3_k127_9004699_0 Bacterial sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007828 597.0
YHH3_k127_9004699_1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007752 575.0
YHH3_k127_9004699_2 Carboxylesterase family - - - 0.000000000000000000000000000000000000000000000000000000000000000002207 244.0
YHH3_k127_9004699_3 - - - - 0.000000000000000000002857 101.0
YHH3_k127_9004699_4 PFAM Hemolysin-type calcium-binding repeat (2 copies) - - - 0.00000000001755 75.0
YHH3_k127_9034342_0 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004975 522.0
YHH3_k127_9034342_1 NAD dependent epimerase/dehydratase family K19068 - 1.1.1.367 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004853 355.0
YHH3_k127_9034342_2 23S rRNA-intervening sequence protein K13010 - 2.6.1.102 0.00000000000000000000000000000000004865 137.0
YHH3_k127_9034342_3 Glycosyl transferases group 1 - - - 0.00000000000000000002005 96.0
YHH3_k127_9055350_0 PFAM Cys Met metabolism K01739,K01758,K01760 - 2.5.1.48,4.4.1.1,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008821 586.0
YHH3_k127_9055350_1 Tetratricopeptide repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005473 559.0
YHH3_k127_9055350_10 PFAM NAD dependent epimerase dehydratase family K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001895 270.0
YHH3_k127_9055350_11 peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002962 262.0
YHH3_k127_9055350_12 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000000000000000000000000001967 143.0
YHH3_k127_9055350_13 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000002149 125.0
YHH3_k127_9055350_14 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000001056 106.0
YHH3_k127_9055350_15 GSCFA family - - - 0.000001064 52.0
YHH3_k127_9055350_16 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.0004207 45.0
YHH3_k127_9055350_2 Transketolase K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 487.0
YHH3_k127_9055350_3 Transketolase K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 430.0
YHH3_k127_9055350_4 protein CHP03519, membrane, Bacteroidetes - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 396.0
YHH3_k127_9055350_5 COGs COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 388.0
YHH3_k127_9055350_6 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 368.0
YHH3_k127_9055350_7 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008244 285.0
YHH3_k127_9055350_8 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002192 285.0
YHH3_k127_9055350_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006987 276.0
YHH3_k127_9081638_0 Carbamoyl-phosphate synthase K01955 - 6.3.5.5 0.0 1590.0
YHH3_k127_9081638_1 Carboxypeptidase regulatory-like domain - - - 0.0 1142.0
YHH3_k127_9081638_10 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 327.0
YHH3_k127_9081638_11 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 314.0
YHH3_k127_9081638_12 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000001651 194.0
YHH3_k127_9081638_13 Domain of unknown function (DUF4369) - - - 0.000000000000000000000000000000000000000000000002429 178.0
YHH3_k127_9081638_14 TIGRFAM Gliding motility-associated lipoprotein, GldH - GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006040,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0017144,GO:0040011,GO:0042737,GO:0043170,GO:0044237,GO:0044248,GO:0046348,GO:0048870,GO:0051179,GO:0051674,GO:0071704,GO:0071976,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000115 112.0
YHH3_k127_9081638_15 - - - - 0.000000000000000000006283 96.0
YHH3_k127_9081638_16 peptidyl-tyrosine sulfation - - - 0.000000000000000001389 92.0
YHH3_k127_9081638_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 508.0
YHH3_k127_9081638_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 491.0
YHH3_k127_9081638_4 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 465.0
YHH3_k127_9081638_5 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006488 477.0
YHH3_k127_9081638_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 422.0
YHH3_k127_9081638_7 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile K01241 - 3.2.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 402.0
YHH3_k127_9081638_8 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005434 390.0
YHH3_k127_9081638_9 flavin reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005087 336.0
YHH3_k127_9118013_0 Polysaccharide biosynthesis C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005254 303.0
YHH3_k127_9118013_1 Chain length determinant protein - - - 0.00000000000000000000000000000000000000000000000000000000000002712 229.0
YHH3_k127_9118013_2 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000000000000000005551 220.0
YHH3_k127_9118013_3 DinB family - - - 0.0000000000000000000000000000009442 138.0
YHH3_k127_9118013_4 O-Antigen ligase - - - 0.00000000000000697 79.0
YHH3_k127_9162811_0 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 364.0
YHH3_k127_9162811_1 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004425 302.0
YHH3_k127_9162811_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000002069 237.0
YHH3_k127_9162811_3 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000000000000000000003853 201.0
YHH3_k127_9162811_4 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000000000004175 73.0
YHH3_k127_9184217_0 cellulase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008619 538.0
YHH3_k127_9184217_1 PKD domain - - - 0.0000000000000000000000000000000000000000000001831 194.0
YHH3_k127_919391_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 3.974e-208 654.0
YHH3_k127_919391_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 3.385e-206 649.0
YHH3_k127_919391_10 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000003035 207.0
YHH3_k127_919391_11 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000001746 207.0
YHH3_k127_919391_12 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000008944 199.0
YHH3_k127_919391_13 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000002372 199.0
YHH3_k127_919391_14 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000002168 186.0
YHH3_k127_919391_15 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000002964 143.0
YHH3_k127_919391_16 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.00000000000000000000000000000000009748 133.0
YHH3_k127_919391_17 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000004723 91.0
YHH3_k127_919391_18 Septum formation initiator - - - 0.000000000000004932 81.0
YHH3_k127_919391_19 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000000001583 73.0
YHH3_k127_919391_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009369 580.0
YHH3_k127_919391_3 Belongs to the CarA family K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 518.0
YHH3_k127_919391_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007397 500.0
YHH3_k127_919391_5 Methionine aminopeptidase K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 337.0
YHH3_k127_919391_6 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 327.0
YHH3_k127_919391_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000314 333.0
YHH3_k127_919391_8 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004201 275.0
YHH3_k127_919391_9 Beta-carotene hydroxylase K15746 - 1.14.15.24 0.000000000000000000000000000000000000000000000000000000000000000000005683 237.0
YHH3_k127_9199159_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 610.0
YHH3_k127_928926_0 AMP-dependent synthetase and ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000419 461.0
YHH3_k127_928926_1 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000002529 203.0
YHH3_k127_9299901_0 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000000000000000000000000000000000000000000000002163 261.0
YHH3_k127_9299901_1 PKD domain - - - 0.0000000000000000000000000000000000000005175 173.0
YHH3_k127_9299901_4 C-terminal domain of CHU protein family - - - 0.000000000000009887 89.0
YHH3_k127_9299901_5 metallopeptidase activity - - - 0.00000001633 69.0
YHH3_k127_9305027_0 Phosphate starvation-inducible protein PhoH K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 449.0
YHH3_k127_9305027_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008053 314.0
YHH3_k127_9305027_2 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000001822 259.0
YHH3_k127_9305027_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000133 260.0
YHH3_k127_9305027_4 S-adenosyl-l-methionine hydroxide adenosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000073 221.0
YHH3_k127_9305027_5 OsmC-like protein - - - 0.000000000000000000000000000000000000000001059 160.0
YHH3_k127_9305027_6 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000002271 111.0
YHH3_k127_9330067_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 496.0
YHH3_k127_9330067_1 NAD dependent epimerase/dehydratase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006638 298.0
YHH3_k127_933468_0 Sulfate permease family K03321 - - 5.196e-269 834.0
YHH3_k127_933468_1 TonB-dependent receptor K02014 - - 0.00000000000000000000000000002226 122.0
YHH3_k127_9362418_0 TonB dependent receptor K02014,K16089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004523 371.0
YHH3_k127_9362418_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 339.0
YHH3_k127_9362418_2 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001949 282.0
YHH3_k127_945173_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 3.809e-247 771.0
YHH3_k127_945173_1 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001139 277.0
YHH3_k127_945173_2 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000227 275.0
YHH3_k127_945173_3 Pectate lyase K01179,K03768,K08738 - 3.2.1.4,5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000001926 236.0
YHH3_k127_945173_4 phosphohydrolase K06885 - - 0.00000000000000000000000000000000000000000000000000000000001755 209.0
YHH3_k127_945173_5 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000001752 131.0
YHH3_k127_945173_7 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000001998 56.0
YHH3_k127_9497804_0 ABC transporter transmembrane region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000982 553.0
YHH3_k127_9497804_1 Biotin-lipoyl like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005725 446.0
YHH3_k127_9497804_10 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.000000000000000000000000000000000000000000000000000002214 201.0
YHH3_k127_9497804_11 Galactokinase galactose-binding signature K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000204 179.0
YHH3_k127_9497804_12 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000002675 170.0
YHH3_k127_9497804_13 IMP dehydrogenase activity K04767,K07182 - - 0.00000000000000000000000000000000000003361 147.0
YHH3_k127_9497804_2 belongs to the imidazoleglycerol-phosphate dehydratase family K01089,K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 438.0
YHH3_k127_9497804_3 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 413.0
YHH3_k127_9497804_4 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 359.0
YHH3_k127_9497804_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 307.0
YHH3_k127_9497804_6 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005079 286.0
YHH3_k127_9497804_7 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003647 287.0
YHH3_k127_9497804_8 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001028 243.0
YHH3_k127_9497804_9 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K11755 GO:0000105,GO:0003674,GO:0003824,GO:0004635,GO:0004636,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016810,GO:0016814,GO:0016817,GO:0016818,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000000000000000000000008485 227.0
YHH3_k127_9504912_1 DNA polymerase III K02342 - 2.7.7.7 0.00000000000000000009413 91.0
YHH3_k127_9550410_0 Oxidoreductase K00184 - - 4.594e-272 854.0
YHH3_k127_9550410_1 PFAM Polysulphide reductase, NrfD K00185 - - 7.507e-267 825.0
YHH3_k127_9550410_2 cytochrome C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001306 281.0
YHH3_k127_9550410_3 Quinol cytochrome c oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001175 271.0
YHH3_k127_9563652_0 Cys/Met metabolism PLP-dependent enzyme K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 402.0
YHH3_k127_9563652_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K00087,K07469 - 1.17.1.4,1.2.99.7 0.0000000000000000000000000000000000000000000000000002646 187.0
YHH3_k127_9563652_2 DsrC like protein K11179 - - 0.0000000000000000000000000000000000001973 143.0
YHH3_k127_9565664_0 COGs COG4995 conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 571.0
YHH3_k127_9565664_1 PFAM Aldehyde dehydrogenase K00128,K00135 - 1.2.1.16,1.2.1.20,1.2.1.3,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008681 487.0
YHH3_k127_9565664_2 Phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 332.0
YHH3_k127_9565664_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000001922 267.0
YHH3_k127_9565664_4 COGs COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000009735 212.0
YHH3_k127_9565664_5 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000002486 113.0
YHH3_k127_9565664_6 PFAM conserved - - - 0.0000000438 57.0
YHH3_k127_9626185_0 domain protein K12287,K12549,K13735,K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 426.0
YHH3_k127_9626185_1 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000003141 203.0
YHH3_k127_9626185_2 TIGRFAM N-terminal double-transmembrane domain - - - 0.000000000000001704 76.0
YHH3_k127_9680262_0 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 471.0
YHH3_k127_9680262_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 371.0
YHH3_k127_9680262_2 involved in cell wall biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001887 262.0
YHH3_k127_9680262_3 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 - 3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000557 243.0
YHH3_k127_9680262_4 - - - - 0.00000000000005071 79.0
YHH3_k127_9680262_5 Peptidase M16 K07263 - - 0.000000006253 60.0
YHH3_k127_9691946_0 glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003572 507.0
YHH3_k127_9691946_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 454.0
YHH3_k127_9691946_2 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 332.0
YHH3_k127_9691946_3 TIGRFAM gliding motility associated - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003842 302.0
YHH3_k127_9691946_4 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000006601 231.0
YHH3_k127_9691946_5 Gliding motility-associated protein GldM - - - 0.0000000000000000000000000000000000000000000000005686 177.0
YHH3_k127_9691946_6 PFAM Vacuole effluxer Atg22 like K06902 - - 0.00000008084 56.0
YHH3_k127_9693707_0 amidohydrolase - - - 8.931e-212 679.0
YHH3_k127_9693707_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009938 456.0
YHH3_k127_9693707_10 Psort location Cytoplasmic, score 8.87 - - - 0.00000000000000001708 88.0
YHH3_k127_9693707_11 protein related to plant photosystem II stability assembly factor - - - 0.00008296 55.0
YHH3_k127_9693707_12 Chitinase class I K01183,K03791 - 3.2.1.14 0.0004119 48.0
YHH3_k127_9693707_2 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 407.0
YHH3_k127_9693707_3 Bacterial regulatory helix-turn-helix protein, lysR family K04761 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007231 351.0
YHH3_k127_9693707_4 Von Willebrand factor A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000568 302.0
YHH3_k127_9693707_5 PFAM amidinotransferase K01482 - 3.5.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000006325 259.0
YHH3_k127_9693707_6 COG0419 ATPase involved in DNA repair K03546 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002716 276.0
YHH3_k127_9693707_7 Esterase PHB depolymerase K03932 - - 0.000000000000000000000000000000000000000000000000000000000000003241 231.0
YHH3_k127_9693707_8 PFAM YceI-like domain - - - 0.000000000000000000000000000000004378 136.0
YHH3_k127_9693707_9 PFAM YceI-like domain - - - 0.000000000000000000000000000005096 127.0
YHH3_k127_9739748_0 TonB-linked outer membrane protein, SusC RagA family - - - 0.0 1141.0
YHH3_k127_9739748_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 4.945e-247 771.0
YHH3_k127_9739748_10 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000001076 136.0
YHH3_k127_9739748_11 metallopeptidase activity K12287 - - 0.0000000000000000003055 104.0
YHH3_k127_9739748_12 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000004003 79.0
YHH3_k127_9739748_2 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 4.287e-227 707.0
YHH3_k127_9739748_3 SusD family K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007539 550.0
YHH3_k127_9739748_4 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006225 328.0
YHH3_k127_9739748_5 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000056 279.0
YHH3_k127_9739748_6 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000003024 226.0
YHH3_k127_9739748_7 Cytidylyltransferase family K00981 - 2.7.7.41 0.000000000000000000000000000000000007099 147.0
YHH3_k127_9739748_8 CAAX amino terminal protease family K07052 - - 0.0000000000000000000000000000000002085 145.0
YHH3_k127_9739748_9 PFAM Sigma 54 modulation protein S30EA ribosomal protein K05808 - - 0.0000000000000000000000000000002358 126.0
YHH3_k127_9786994_0 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003127 469.0
YHH3_k127_9786994_1 belongs to the CobB CobQ family K06873 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009041 390.0
YHH3_k127_9786994_2 PFAM Signal transduction histidine kinase, internal region - - - 0.0000000000000000000000000000000000000000000000000001039 200.0
YHH3_k127_9786994_3 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000001085 186.0
YHH3_k127_9786994_4 Domain of unknown function (DUF4920) - - - 0.00000000000000000000000000000000000000000000000001382 184.0
YHH3_k127_9786994_5 peptidase M23 - - - 0.00000000000000000000000000000000000000000000000002359 188.0
YHH3_k127_9786994_6 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000764 176.0
YHH3_k127_9786994_7 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000005204 164.0
YHH3_k127_9822124_0 Organic solvent tolerance protein OstA - - - 7.061e-205 668.0
YHH3_k127_9822124_1 Cell wall hydrolase autolysin K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 332.0
YHH3_k127_9822124_2 Saccharopine dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002854 267.0
YHH3_k127_9822124_3 Hep Hag repeat protein - - - 0.0000000000000000000000000000000000000000000000000001928 207.0
YHH3_k127_9822124_4 Protein conserved in bacteria - - - 0.000000000000000000000000001407 117.0
YHH3_k127_9822124_5 - - - - 0.00000000000000000004539 94.0
YHH3_k127_9822124_6 Pkd domain containing protein - - - 0.0000001742 59.0
YHH3_k127_9822124_7 Type II restriction enzyme, methylase - - - 0.0000872 50.0
YHH3_k127_9844394_0 Succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1118.0
YHH3_k127_9844394_1 Asparaginyl-tRNA synthetase K01893 - 6.1.1.22 4.74e-236 737.0
YHH3_k127_9844394_2 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004274 585.0
YHH3_k127_9844394_3 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 475.0
YHH3_k127_9844394_4 Succinate dehydrogenase fumarate reductase Fe-S protein subunit K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 406.0
YHH3_k127_9844394_5 TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 291.0
YHH3_k127_9844394_6 COG NOG06393 non supervised orthologous group - - - 0.00000000000000000000000000000000000000000006024 175.0
YHH3_k127_9854988_0 Belongs to the heme-copper respiratory oxidase family K15862 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004548 524.0
YHH3_k127_9854988_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 401.0
YHH3_k127_9854988_2 TIGRFAM cytochrome oxidase maturation protein, cbb3-type - - - 0.00000000000000006615 83.0
YHH3_k127_9870950_0 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.0 1038.0
YHH3_k127_9870950_1 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961,K01965,K01968 - 6.3.4.14,6.4.1.2,6.4.1.3,6.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006954 354.0
YHH3_k127_9870950_2 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 291.0
YHH3_k127_987661_0 peptidase K13049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000588 448.0
YHH3_k127_987661_1 histidine kinase-, DNA gyrase B - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 420.0
YHH3_k127_987661_2 DNA-templated transcription, initiation K03088,K03091 - - 0.000000000000000001174 93.0
YHH3_k127_9891536_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 1.74e-278 877.0
YHH3_k127_9891536_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002884 617.0
YHH3_k127_9891536_2 Glycosyl hydrolases family 16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003826 249.0
YHH3_k127_9891536_3 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000007063 144.0
YHH3_k127_989190_0 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002545 269.0
YHH3_k127_989190_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000006125 222.0
YHH3_k127_989190_2 Biogenesis protein - - - 0.00000000000000000000000000000000000000000000000000000000004414 211.0
YHH3_k127_989190_3 Metal ABC transporter ATPase K01534 - 3.6.3.3,3.6.3.5 0.0000000001016 66.0
YHH3_k127_9892162_0 PFAM Cytochrome c assembly protein K02198 - - 3.389e-300 947.0
YHH3_k127_9892162_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 610.0
YHH3_k127_9892162_10 DinB superfamily - - - 0.0000000000000000000000000000001045 130.0
YHH3_k127_9892162_11 - - - - 0.00000000000000000000000011 113.0
YHH3_k127_9892162_12 - - - - 0.00003714 49.0
YHH3_k127_9892162_2 Cys/Met metabolism PLP-dependent enzyme K01761 - 4.4.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 590.0
YHH3_k127_9892162_3 nucleoside transporter K03317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 500.0
YHH3_k127_9892162_4 domain, Protein K20276 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003404 273.0
YHH3_k127_9892162_5 uridine kinase K00876 - 2.7.1.48 0.00000000000000000000000000000000000000000000000000000000000000001078 231.0
YHH3_k127_9892162_6 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000001188 207.0
YHH3_k127_9892162_7 - - - - 0.0000000000000000000000000000000000000000000002827 177.0
YHH3_k127_9892162_8 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000000000000000000001276 168.0
YHH3_k127_9892162_9 Rossmann-like domain - - - 0.0000000000000000000000000000000000000000007935 166.0
YHH3_k127_9914292_0 BNR repeat-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000051 291.0
YHH3_k127_9914292_1 PA14 - - - 0.00009917 55.0
YHH3_k127_9957632_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1249.0
YHH3_k127_9957632_1 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K00499 - 1.14.15.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004059 316.0
YHH3_k127_9957632_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 303.0
YHH3_k127_9957632_3 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000006285 93.0
YHH3_k127_9968707_0 - - - - 0.0000000000000000000000000000000000000000000000000005298 192.0
YHH3_k127_9968707_1 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000001037 186.0
YHH3_k127_9968707_2 acetyltransferase - - - 0.0000000000000000000000000000000004451 137.0
YHH3_k127_9968707_3 Sulfate permease K03321 - - 0.000000000000000000000008439 103.0
YHH3_k127_9968707_4 oxidoreductase activity - - - 0.0000000000000000003856 99.0
YHH3_k127_9968707_5 domain, Protein - - - 0.00000005568 64.0
YHH3_k127_9990246_0 TamB, inner membrane protein subunit of TAM complex - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 352.0
YHH3_k127_999136_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009879 600.0
YHH3_k127_999136_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008141 502.0
YHH3_k127_999136_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 397.0
YHH3_k127_999136_3 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007632 296.0
YHH3_k127_999136_5 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000201 171.0
YHH3_k127_999136_6 - - - - 0.00000000000000000000125 106.0