Overview

ID MAG04567
Name YHH3_bin.29
Sample SMP0123
Taxonomy
Kingdom Bacteria
Phylum Elusimicrobiota
Class Elusimicrobia
Order FEN-1173
Family FEN-1173
Genus
Species
Assembly information
Completeness (%) 68.99
Contamination (%) 1.29
GC content (%) 61.0
N50 (bp) 6,712
Genome size (bp) 2,176,677

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1708

Gene name Description KEGG GOs EC E-value Score Sequence
YHH3_k127_10079206_0 Ribosomal protein S1 K02945,K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 424.0
YHH3_k127_10079206_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000406 325.0
YHH3_k127_10079206_2 HAMP domain K07651 - 2.7.13.3 0.00000000000000000000000000000000000000004617 167.0
YHH3_k127_10079206_3 Response regulator receiver domain - - - 0.00000000000000000000000008409 112.0
YHH3_k127_10079206_4 Sigma-54 interaction domain protein K07712,K07714 - - 0.000000000000000003217 97.0
YHH3_k127_10079206_5 4-amino-4-deoxy-L-arabinose transferase activity K14340 - - 0.0000000000000001148 93.0
YHH3_k127_10079206_6 Outer membrane efflux protein K12340 - - 0.000000000001148 78.0
YHH3_k127_1010642_0 DNA helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003945 454.0
YHH3_k127_1010642_1 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007905 338.0
YHH3_k127_1010642_2 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.0000000000000000000000000000001131 126.0
YHH3_k127_1010642_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000008799 93.0
YHH3_k127_1010642_4 copG family - - - 0.00000000000000001139 85.0
YHH3_k127_1010642_5 long-chain fatty acid transport protein - - - 0.00000000000007749 82.0
YHH3_k127_10225584_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 591.0
YHH3_k127_10225584_1 Protein of unknown function (DUF3131) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 408.0
YHH3_k127_10225584_2 PFAM Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 347.0
YHH3_k127_10225584_3 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000000000000000000000000003701 194.0
YHH3_k127_10225584_5 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0032991,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051704,GO:0061077,GO:0101031,GO:1990220 - 0.00000000000000000000000000000000003218 138.0
YHH3_k127_10225584_6 Periplasmic binding protein domain - - - 0.00000000000000000000000000001129 133.0
YHH3_k127_10225584_7 - K07283 - - 0.00000000000001141 83.0
YHH3_k127_10225584_8 Protein of unknown function (DUF3131) - - - 0.00000000002046 76.0
YHH3_k127_10225584_9 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000051 70.0
YHH3_k127_1027885_0 AAA ATPase, central domain protein K07478 - - 0.000000000000000000000000003871 114.0
YHH3_k127_1027885_1 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000009696 54.0
YHH3_k127_1027885_2 SNARE associated Golgi protein - - - 0.0008573 46.0
YHH3_k127_10296636_0 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 327.0
YHH3_k127_10296636_1 Peptidase U62 modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 286.0
YHH3_k127_10296636_2 PD-(D/E)XK nuclease superfamily K07465 - - 0.0000000101 67.0
YHH3_k127_10356508_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006558 324.0
YHH3_k127_10356508_1 PFAM Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 289.0
YHH3_k127_10356508_2 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004518 281.0
YHH3_k127_10426114_0 DUF234 DEXX-box ATPase K06921 - - 0.000000000000000000000000000000000000000000000000000000000000000000236 243.0
YHH3_k127_10429540_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.14 2.988e-224 704.0
YHH3_k127_10429540_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000001083 149.0
YHH3_k127_10429540_2 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000003781 49.0
YHH3_k127_10446736_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004608 289.0
YHH3_k127_10446736_1 Belongs to the peptidase M16 family K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003321 263.0
YHH3_k127_10446736_2 peptidase - - - 0.0000000000000000000000000000000564 134.0
YHH3_k127_10446736_3 PFAM regulatory protein AsnC Lrp family - - - 0.0000008961 56.0
YHH3_k127_10446736_4 permease K15771 GO:0003674,GO:0003824,GO:0005215,GO:0005363,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0008643,GO:0015144,GO:0015154,GO:0015157,GO:0015399,GO:0015405,GO:0015422,GO:0015423,GO:0015766,GO:0015768,GO:0015772,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0032991,GO:0034219,GO:0042623,GO:0042626,GO:0043190,GO:0043211,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990060,GO:1990351 - 0.000004001 54.0
YHH3_k127_10480925_0 Domain of unknown function (DUF4143) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 418.0
YHH3_k127_10480925_1 Domain of unknown function (DUF4143) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009975 249.0
YHH3_k127_10480925_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000001385 181.0
YHH3_k127_10480925_3 Protein of unknown function (DUF1778) - - - 0.00000002971 55.0
YHH3_k127_10494618_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 346.0
YHH3_k127_10494618_1 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000005943 91.0
YHH3_k127_10494618_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 6.3.2.9 0.0003504 44.0
YHH3_k127_10527431_0 cytochrome c - GO:0005575,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0017004,GO:0022607,GO:0031224,GO:0034622,GO:0043933,GO:0044085,GO:0044425,GO:0065003,GO:0071840 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003829 586.0
YHH3_k127_10527431_1 cytochrome c biogenesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007848 364.0
YHH3_k127_10527431_2 - - - - 0.0000000000000000000000000009212 122.0
YHH3_k127_10558916_0 Belongs to the ClpA ClpB family K03696 - - 1.884e-315 986.0
YHH3_k127_10558916_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003157 393.0
YHH3_k127_10558916_2 ABC transporter - - - 0.000000000000000006946 84.0
YHH3_k127_10567113_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005754 277.0
YHH3_k127_10567113_1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004075 274.0
YHH3_k127_10567113_2 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000003628 231.0
YHH3_k127_10567113_3 Bifunctional nuclease K08999 - - 0.000000000000000000000000000006469 125.0
YHH3_k127_10567113_4 Virulence factor Mce family protein K02067 - - 0.000000000000000000006027 107.0
YHH3_k127_10567113_5 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000001726 75.0
YHH3_k127_10612050_0 protoporphyrinogen oxidase activity K00231,K14266 - 1.14.19.9,1.3.3.15,1.3.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000001231 267.0
YHH3_k127_10612050_1 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000009612 154.0
YHH3_k127_10630080_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885,K09698 - 6.1.1.17,6.1.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009781 477.0
YHH3_k127_10630080_1 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 386.0
YHH3_k127_10630080_2 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 379.0
YHH3_k127_10630080_3 peroxidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001432 283.0
YHH3_k127_10630080_4 Redoxin K11065 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000006795 211.0
YHH3_k127_10698082_0 ACT domain - - - 0.00000000001005 70.0
YHH3_k127_1071767_0 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001143 251.0
YHH3_k127_1071767_1 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000002484 229.0
YHH3_k127_1071767_10 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000002031 91.0
YHH3_k127_1071767_11 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000004914 62.0
YHH3_k127_1071767_12 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.000000003482 59.0
YHH3_k127_1071767_13 binds to the 23S rRNA K02876 - - 0.0005723 46.0
YHH3_k127_1071767_2 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000001797 208.0
YHH3_k127_1071767_3 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000002507 210.0
YHH3_k127_1071767_4 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000001389 181.0
YHH3_k127_1071767_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000000000000001279 171.0
YHH3_k127_1071767_6 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000009673 167.0
YHH3_k127_1071767_7 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000000159 133.0
YHH3_k127_1071767_8 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000003258 108.0
YHH3_k127_1071767_9 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000005813 108.0
YHH3_k127_10769785_0 Large extracellular alpha-helical protein K06894 - - 1.605e-256 857.0
YHH3_k127_10769785_1 penicillin binding K05367 - 2.4.1.129 0.00000000000000000000000000000000000000000000000001336 192.0
YHH3_k127_10832793_0 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000004895 216.0
YHH3_k127_10832793_1 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.000000000006014 66.0
YHH3_k127_10859137_0 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000002498 188.0
YHH3_k127_10859137_1 Ubiquinol-cytochrome C reductase - - - 0.00000000000000000000001127 106.0
YHH3_k127_10929645_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000002759 209.0
YHH3_k127_10929645_1 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000001545 164.0
YHH3_k127_10929645_2 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000001038 124.0
YHH3_k127_10929645_3 Ribosomal L27 protein K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000005144 104.0
YHH3_k127_10932772_0 PFAM Orn Lys Arg decarboxylase major K01582,K01585 - 4.1.1.18,4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 459.0
YHH3_k127_10932772_1 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.00000000000003332 78.0
YHH3_k127_10989428_0 Transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 302.0
YHH3_k127_10989428_1 - - - - 0.000003051 55.0
YHH3_k127_1099875_0 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase activity K11779,K11780,K11781,K11784,K18285 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016765,GO:0044237,GO:0044249,GO:0044689,GO:0051186,GO:0051188 1.21.98.1,2.5.1.120,2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 381.0
YHH3_k127_1099875_1 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007934 275.0
YHH3_k127_1099875_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001967 246.0
YHH3_k127_1099875_3 to be involved in C-type cytochrome biogenesis K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000227 192.0
YHH3_k127_1099875_4 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K07081,K11782,K11784 - 1.21.98.1,4.2.1.151 0.00000000000000003236 88.0
YHH3_k127_1099875_5 Thioredoxin-like [2Fe-2S] ferredoxin - - - 0.00000000007473 69.0
YHH3_k127_11009691_0 PFAM Integrase catalytic region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 473.0
YHH3_k127_11013801_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 1.459e-215 683.0
YHH3_k127_11013801_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 526.0
YHH3_k127_11013801_2 SAICAR synthetase K01923 - 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 369.0
YHH3_k127_11013801_3 ATPase (AAA superfamily K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 351.0
YHH3_k127_11013801_4 ORF6N domain - - - 0.000000000000000000000000000000000000000000007834 168.0
YHH3_k127_11013801_5 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000002596 85.0
YHH3_k127_11048748_0 - K06921 - - 0.000000000000000000000000000000000000000000000000008989 198.0
YHH3_k127_11048748_1 3'-5' exonuclease - - - 0.00000000000000000000000000000000001695 139.0
YHH3_k127_11112043_0 GTP-binding protein TypA K06207 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005945 570.0
YHH3_k127_11132286_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 431.0
YHH3_k127_11132286_1 Electron transfer flavoprotein K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016020,GO:0016491,GO:0022900,GO:0030312,GO:0040007,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000009426 274.0
YHH3_k127_11132286_2 Electron transfer flavoprotein K03522,K22432 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016627,GO:0016628,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363 1.3.1.108 0.00000000000000000000000000000000000000000000000000000000000000000005943 243.0
YHH3_k127_11132286_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000001867 202.0
YHH3_k127_11132286_4 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.0000000000000000000000000000000000000000000000000008045 192.0
YHH3_k127_11147115_0 PFAM Tetratricopeptide - - - 0.000000000000000000000000000000845 142.0
YHH3_k127_11147115_1 MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000003142 99.0
YHH3_k127_11147115_2 Tetratricopeptide repeat - - - 0.00000000000006422 83.0
YHH3_k127_11147115_3 Biopolymer transport protein ExbD/TolR K03560 - - 0.0000000005755 66.0
YHH3_k127_11147115_4 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000003851 60.0
YHH3_k127_11147115_5 TonB C terminal K03832 - - 0.0000694 55.0
YHH3_k127_11149812_0 ABC transporter K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008844 449.0
YHH3_k127_11149812_1 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.0000000000000000000000000000000000000003801 155.0
YHH3_k127_11167301_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006864 568.0
YHH3_k127_11167301_1 Thi4 family K00313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 438.0
YHH3_k127_11167301_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000042 282.0
YHH3_k127_11167301_3 PFAM HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000001678 192.0
YHH3_k127_11167301_4 Belongs to the Nudix hydrolase family - - - 0.000000000000000000000000008162 114.0
YHH3_k127_11167301_5 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K03855 - - 0.0000000000000000000000000132 112.0
YHH3_k127_11167301_6 PFAM response regulator receiver - - - 0.000000000000000001844 89.0
YHH3_k127_11167301_7 COG1392 Phosphate transport regulator (distant homolog of PhoU) K07220 - - 0.0005907 48.0
YHH3_k127_11213163_0 PFAM Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000001229 185.0
YHH3_k127_11213163_1 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000004288 192.0
YHH3_k127_11213163_2 Glycosyltransferase family 9 (heptosyltransferase) K02843,K02849 - - 0.0000000000000000000000000000000000000000000000217 184.0
YHH3_k127_11216571_0 AI-2E family transporter - GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.00000000000000000000000000000000000004879 159.0
YHH3_k127_11216571_1 Crp-like helix-turn-helix domain K10914 - - 0.0000000000000003252 87.0
YHH3_k127_11229836_0 Conserved region in glutamate synthase - - - 3.549e-278 865.0
YHH3_k127_11229836_1 PFAM NAD-dependent epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 545.0
YHH3_k127_11229836_2 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.000000000000000000000000000000000001803 141.0
YHH3_k127_11229836_3 Beta-propeller repeat - - - 0.00000000000000000000000000000000105 149.0
YHH3_k127_11229836_4 PFAM Class I peptide chain release factor - - - 0.0000000000000000000000000000005845 128.0
YHH3_k127_11400924_0 Glycosyltransferase family 20 - - - 3.724e-248 787.0
YHH3_k127_11400924_1 Cellobiose phosphorylase K00702 - 2.4.1.20 2.287e-209 678.0
YHH3_k127_11400924_10 Trehalose-phosphatase K16055 - 2.4.1.15,3.1.3.12 0.0000000000000000000000000000000718 136.0
YHH3_k127_11400924_11 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000002162 111.0
YHH3_k127_11400924_12 SpoVT / AbrB like domain K07172 - - 0.000000000000000002226 87.0
YHH3_k127_11400924_13 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000002486 69.0
YHH3_k127_11400924_14 nuclease activity K06218 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0006139,GO:0006355,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0016787,GO:0016788,GO:0019219,GO:0019222,GO:0019439,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0034641,GO:0034655,GO:0040008,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0045892,GO:0045926,GO:0045934,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090305,GO:1901360,GO:1901361,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000108 71.0
YHH3_k127_11400924_15 - - - - 0.00000000001197 68.0
YHH3_k127_11400924_2 Belongs to the glycosyl hydrolase 35 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009348 421.0
YHH3_k127_11400924_3 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 323.0
YHH3_k127_11400924_4 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000003121 209.0
YHH3_k127_11400924_5 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000003084 202.0
YHH3_k127_11400924_6 PFAM ABC transporter K01990 - - 0.000000000000000000000000000000000000000004596 164.0
YHH3_k127_11400924_7 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.000000000000000000000000000000000000000006924 159.0
YHH3_k127_11400924_8 HD domain - - - 0.00000000000000000000000000000000000004478 156.0
YHH3_k127_11400924_9 Sodium/calcium exchanger protein K07301 - - 0.00000000000000000000000000000001542 139.0
YHH3_k127_11448517_0 Protein of unknown function (DUF1722) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006616 243.0
YHH3_k127_11448517_1 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000006671 139.0
YHH3_k127_11448517_2 Class II Aldolase and Adducin N-terminal domain - - - 0.0000000002234 72.0
YHH3_k127_1149589_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 5.85e-222 719.0
YHH3_k127_1149589_1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000004782 220.0
YHH3_k127_1149589_2 4Fe-4S dicluster domain K11473 - - 0.000000000000000000000000000000000000000000000000000000000003543 225.0
YHH3_k127_1149589_3 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000002925 142.0
YHH3_k127_1149589_4 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000005055 126.0
YHH3_k127_1149589_5 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.00000000000000000000000003413 121.0
YHH3_k127_1149589_6 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.000000000000000000001174 100.0
YHH3_k127_11503282_0 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003109 296.0
YHH3_k127_11503282_1 Histidine kinase - - - 0.000001334 57.0
YHH3_k127_11504777_0 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000001689 62.0
YHH3_k127_11504777_1 ompA family - - - 0.00000364 59.0
YHH3_k127_11632003_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 2.211e-232 747.0
YHH3_k127_11632003_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008285 544.0
YHH3_k127_11682927_0 pilus organization K12132 - 2.7.11.1 0.000001376 57.0
YHH3_k127_11682927_1 PFAM Leucine Rich Repeat - - - 0.00003013 57.0
YHH3_k127_11682927_2 ZU5 domain - - - 0.00003979 56.0
YHH3_k127_11690297_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 5.371e-218 698.0
YHH3_k127_11690297_1 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000005376 74.0
YHH3_k127_11690297_2 TIGRFAM DNA protecting protein DprA K04096 - - 0.00009106 46.0
YHH3_k127_11695801_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1132.0
YHH3_k127_11695801_1 Ribosomal RNA large subunit methyltransferase J K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000000000005694 229.0
YHH3_k127_11695801_3 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000000003727 70.0
YHH3_k127_11695801_4 Evidence 5 No homology to any previously reported sequences K03643 GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 - 0.0000000006203 68.0
YHH3_k127_11776843_0 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 289.0
YHH3_k127_11776843_1 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.0000000000000000000000000000000000000000000004629 173.0
YHH3_k127_11776843_2 Domain of unknown function (DUF4160) - - - 0.000000000000000000000004816 106.0
YHH3_k127_11776843_3 Protein of unknown function (DUF2442) - - - 0.000000000000000000001119 97.0
YHH3_k127_11776843_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 GO:0000724,GO:0000725,GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009378,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0031668,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:1901360 3.6.4.12 0.00000000000004694 81.0
YHH3_k127_11786552_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.098e-207 673.0
YHH3_k127_11786552_1 pyridine nucleotide-disulfide oxidoreductase K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 314.0
YHH3_k127_11786552_2 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000001702 235.0
YHH3_k127_1184479_0 von Willebrand factor (vWF) type A domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008798 345.0
YHH3_k127_1184479_1 PFAM von Willebrand factor type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000003988 239.0
YHH3_k127_1184479_2 Oxygen tolerance - - - 0.000000000001485 72.0
YHH3_k127_11863973_0 COG2706 3-carboxymuconate cyclase K07404 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004576 327.0
YHH3_k127_11863973_1 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.00000000000000000000000000000000000000000000000001803 188.0
YHH3_k127_11863973_2 Glucose dehydrogenase C-terminus - - - 0.0000000000000000000001958 98.0
YHH3_k127_11928320_0 ATPase (AAA superfamily) K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 454.0
YHH3_k127_11928320_1 Parallel beta-helix repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003661 305.0
YHH3_k127_11928320_2 Fibronectin type 3 domain K12685,K16785,K16786,K16787 - - 0.0000000000000000000000000000000000000000002038 166.0
YHH3_k127_11928320_3 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.00000000000000000000000000000000001002 139.0
YHH3_k127_11928320_4 CopG antitoxin of type II toxin-antitoxin system - - - 0.000000000000000000000000000000002537 130.0
YHH3_k127_11928320_5 COGs COG4771 Outer membrane receptor for ferrienterochelin and colicins K02014 - - 0.0000000000000000000000000001065 133.0
YHH3_k127_11928320_6 Protein of unknown function (DUF2892) - - - 0.0000000000000009243 79.0
YHH3_k127_11928320_7 - - - - 0.00000000003637 69.0
YHH3_k127_11965638_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007174 426.0
YHH3_k127_11965638_1 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.000000000000000000000000000000000000000005851 159.0
YHH3_k127_11965638_2 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000008851 56.0
YHH3_k127_11980958_0 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000001745 131.0
YHH3_k127_12000845_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 538.0
YHH3_k127_12000845_1 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007365 381.0
YHH3_k127_12000845_10 - - - - 0.0000000005587 72.0
YHH3_k127_12000845_2 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000008737 269.0
YHH3_k127_12000845_3 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004186 265.0
YHH3_k127_12000845_4 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000005461 203.0
YHH3_k127_12000845_5 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.0000000000000000000000000000000000000003242 160.0
YHH3_k127_12000845_6 involved in cell wall biogenesis - - - 0.0000000000000000000000000000000000005104 150.0
YHH3_k127_12000845_7 Methyltransferase domain - - - 0.00000000000000000000000000000009126 133.0
YHH3_k127_12000845_8 Methyltransferase domain - - - 0.00000000000000000000000000003925 132.0
YHH3_k127_12000845_9 Methicillin resistance protein K05363,K11693 - 2.3.2.10,2.3.2.16 0.00000000000000000000000009753 116.0
YHH3_k127_12003327_0 Belongs to the FtsK SpoIIIE SftA family K03466 GO:0000003,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0019954,GO:0030436,GO:0031323,GO:0031326,GO:0032502,GO:0043934,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009285 454.0
YHH3_k127_12003327_1 Uncharacterized protein family UPF0004 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 302.0
YHH3_k127_12003327_2 Domain of unknown function (DUF4115) - - - 0.0000000000000000002619 102.0
YHH3_k127_12003327_3 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000009979 83.0
YHH3_k127_12041583_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 3.009e-235 744.0
YHH3_k127_12041583_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01007,K08483 - 2.7.3.9,2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 514.0
YHH3_k127_12041583_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000002016 199.0
YHH3_k127_12041583_3 phosphocarrier protein HPr K11189 - - 0.000000000000000000005536 96.0
YHH3_k127_12062551_0 UDP binding domain K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006865 430.0
YHH3_k127_12062551_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005315 396.0
YHH3_k127_12062551_2 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.000000000000000000006747 108.0
YHH3_k127_12087841_0 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000005204 234.0
YHH3_k127_12087841_1 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000002531 229.0
YHH3_k127_12087841_2 E3 Ubiquitin ligase - - - 0.00000000000000000000000000000000000000000000000000231 195.0
YHH3_k127_12087841_4 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000003533 109.0
YHH3_k127_12100705_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695,K03696 - - 1.43e-223 704.0
YHH3_k127_12100705_1 PFAM peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 550.0
YHH3_k127_12111718_0 chorismate binding enzyme K01665,K02619,K03342,K13503,K13950 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.6.1.85,4.1.3.27,4.1.3.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006518 347.0
YHH3_k127_12111718_1 Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins K07400 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010106,GO:0010467,GO:0015976,GO:0016043,GO:0016226,GO:0019538,GO:0019725,GO:0022607,GO:0030003,GO:0031163,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042592,GO:0042594,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0050896,GO:0051186,GO:0051536,GO:0051539,GO:0051540,GO:0051604,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071496,GO:0071704,GO:0071840,GO:0097428,GO:0098771,GO:1901564 - 0.0000000000000000000000002958 108.0
YHH3_k127_12191832_0 PFAM Di-glucose binding within endoplasmic reticulum - - - 0.000000000000000000000000000000000000000000000000000000000000000007773 253.0
YHH3_k127_12192938_0 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K04085 - - 4.246e-253 796.0
YHH3_k127_12192938_1 Transposase DNA-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009942 258.0
YHH3_k127_12192938_2 - - - - 0.00000000000000002206 90.0
YHH3_k127_12192938_3 MarC family integral membrane protein K05595 - - 0.00000000000000004905 82.0
YHH3_k127_12210751_0 ATPase (AAA superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495 414.0
YHH3_k127_12210751_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000001078 111.0
YHH3_k127_12229264_0 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009387 401.0
YHH3_k127_12229264_1 SMART ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001389 254.0
YHH3_k127_12229264_2 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.0000000000000000000000000000000000000000000105 168.0
YHH3_k127_12232746_0 COG2270 Permeases of the major facilitator superfamily K06902 - - 0.0000000000000000000000000000000000000000004296 165.0
YHH3_k127_12232746_1 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate K03785 - 4.2.1.10 0.00000000000000008596 91.0
YHH3_k127_12246166_0 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000005733 245.0
YHH3_k127_12246166_1 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000005964 104.0
YHH3_k127_12246166_2 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000007872 89.0
YHH3_k127_12246166_3 Belongs to the UPF0109 family K06960 - - 0.00000002966 57.0
YHH3_k127_12246166_4 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.00001983 49.0
YHH3_k127_12270744_0 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.000000000000000000000000000000000000000000000000000000005007 208.0
YHH3_k127_12270744_1 Squalene/phytoene synthase - - - 0.0000000001234 66.0
YHH3_k127_12279649_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 3.611e-219 689.0
YHH3_k127_12279649_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 4.763e-197 627.0
YHH3_k127_12279649_10 - - - - 0.000000000000000000372 100.0
YHH3_k127_12279649_11 - - - - 0.00000000000000004546 94.0
YHH3_k127_12279649_12 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000004569 72.0
YHH3_k127_12279649_2 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004794 604.0
YHH3_k127_12279649_3 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 566.0
YHH3_k127_12279649_4 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 417.0
YHH3_k127_12279649_5 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000004827 233.0
YHH3_k127_12279649_6 TIGRFAM acetolactate synthase, small subunit K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000005815 203.0
YHH3_k127_12279649_8 CDP-alcohol phosphatidyltransferase K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000002111 199.0
YHH3_k127_12279649_9 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000001727 169.0
YHH3_k127_12288859_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 556.0
YHH3_k127_12288859_1 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 412.0
YHH3_k127_12288859_2 Glycosyltransferase, group 4 family K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000000000001772 231.0
YHH3_k127_12288859_3 Telomere recombination K07566 GO:0000049,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 2.7.7.87 0.0000000000000000000000000000000000000006496 157.0
YHH3_k127_12288859_4 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000008415 109.0
YHH3_k127_12291275_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 2.398e-265 835.0
YHH3_k127_12291275_1 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005317 415.0
YHH3_k127_12291275_2 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009302 420.0
YHH3_k127_12291275_3 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000001294 192.0
YHH3_k127_12291275_4 GGDEF domain - - - 0.00000000000000000000000000000000000005913 155.0
YHH3_k127_12291275_5 Hemerythrin - - - 0.00001046 53.0
YHH3_k127_12370676_0 Domain of unknown function (DUF4143) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000808 466.0
YHH3_k127_12370676_1 PLD-like domain - - - 0.000000000000009343 87.0
YHH3_k127_12370676_2 - - - - 0.0000001046 64.0
YHH3_k127_12399849_0 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000706 270.0
YHH3_k127_12399849_1 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010467,GO:0015934,GO:0015968,GO:0016043,GO:0019538,GO:0019843,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0031667,GO:0031668,GO:0031669,GO:0032984,GO:0032991,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0042594,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0051716,GO:0065003,GO:0070925,GO:0071496,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000002354 194.0
YHH3_k127_12399849_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000024 190.0
YHH3_k127_12399849_3 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000007883 179.0
YHH3_k127_12399849_4 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000004304 78.0
YHH3_k127_12399849_5 VIT family - - - 0.000000000000003352 84.0
YHH3_k127_12399849_6 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000001843 59.0
YHH3_k127_12417165_0 - - - - 0.00000000000000000000000000000000002534 139.0
YHH3_k127_12417165_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold K01046 - 3.1.1.3 0.000000000000000000000000005779 122.0
YHH3_k127_12417165_2 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 GO:0000270,GO:0000271,GO:0003674,GO:0003824,GO:0003977,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006629,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009252,GO:0009273,GO:0009987,GO:0016051,GO:0016740,GO:0016772,GO:0016779,GO:0030203,GO:0033692,GO:0034637,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0070569,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509 2.3.1.157,2.7.7.23 0.000000000000004509 77.0
YHH3_k127_12472714_0 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000002179 192.0
YHH3_k127_12472714_1 Belongs to the TrpC family K01609 - 4.1.1.48 0.0000000000000009582 79.0
YHH3_k127_12472714_2 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K06001 - 4.2.1.20 0.0000000000001293 76.0
YHH3_k127_12483241_0 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000001074 184.0
YHH3_k127_12483241_1 membrane K08978 - - 0.000000000000000000000002271 109.0
YHH3_k127_12483241_2 PFAM translation initiation factor SUI1 K03113 - - 0.0000000000000004687 80.0
YHH3_k127_12483241_3 - - - - 0.000000004609 59.0
YHH3_k127_12483241_4 Helix-turn-helix domain - - - 0.00000004626 58.0
YHH3_k127_12524708_0 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000002581 77.0
YHH3_k127_12524708_1 Biopolymer transport protein ExbD/TolR K03560 - - 0.0000000001545 68.0
YHH3_k127_12524708_2 Biopolymer transport protein ExbD/TolR K03560 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015833,GO:0015893,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032153,GO:0042221,GO:0042493,GO:0042886,GO:0042891,GO:0043213,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000001351 62.0
YHH3_k127_12661225_0 ATPase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 532.0
YHH3_k127_12661225_1 PspA/IM30 family K03969 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005069 319.0
YHH3_k127_12661225_2 Filamentation induced by cAMP protein fic - - - 0.000000000000000000000000000000000000000000000000000009626 201.0
YHH3_k127_12684975_0 Saccharopine dehydrogenase C-terminal domain - - - 9.549e-215 671.0
YHH3_k127_12684975_1 carboxynorspermidine decarboxylase K13747 - 4.1.1.96 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004991 489.0
YHH3_k127_12684975_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 464.0
YHH3_k127_12684975_3 radical SAM domain protein K22318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000387 459.0
YHH3_k127_12684975_4 Predicted permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501 344.0
YHH3_k127_12684975_5 Site-specific recombinase, DNA invertase Pin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004893 276.0
YHH3_k127_12684975_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001435 269.0
YHH3_k127_12684975_7 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304,K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000002194 246.0
YHH3_k127_12684975_8 - - - - 0.0000000000000000000001115 115.0
YHH3_k127_12684975_9 - - - - 0.0001199 44.0
YHH3_k127_12700321_0 Inositol monophosphatase family K01082 - 3.1.3.7 0.0000000000000000000000000000000000004654 155.0
YHH3_k127_12700321_1 FIST C domain - - - 0.000000000000001891 80.0
YHH3_k127_1271735_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 403.0
YHH3_k127_1271735_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 379.0
YHH3_k127_1271735_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K03074,K12257 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000111 235.0
YHH3_k127_1271735_3 Preprotein translocase subunit K03210 - - 0.0000000000000000000006318 100.0
YHH3_k127_1271735_4 Domain of unknown function (DUF374) K09778 - - 0.0000000000000001035 86.0
YHH3_k127_1271735_5 PFAM AsmA family protein K07289 - - 0.0000005502 62.0
YHH3_k127_12732273_0 Belongs to the glutaminase family K01425 - 3.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 422.0
YHH3_k127_12732273_1 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 342.0
YHH3_k127_12732273_2 Sulfatase K01130 - 3.1.6.1 0.00000000000000003835 82.0
YHH3_k127_12737787_0 methyltransferase - - - 0.00000000000000000000000000000000002881 158.0
YHH3_k127_12737787_1 Permease YjgP YjgQ family K11720 - - 0.0000000000000000000000000000000007267 143.0
YHH3_k127_12737787_2 Phosphoribosyl transferase domain K00764 - 2.4.2.14 0.0007807 45.0
YHH3_k127_12781422_0 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 2.736e-230 719.0
YHH3_k127_12781422_1 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 497.0
YHH3_k127_12781422_2 TIGRFAM methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000006038 222.0
YHH3_k127_12845814_0 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000008338 193.0
YHH3_k127_12845814_1 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.0000000000000000000000000000000000000000002909 169.0
YHH3_k127_12845814_2 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00226,K00254 - 1.3.5.2,1.3.98.1 0.00000000000000000000009411 98.0
YHH3_k127_12877169_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 325.0
YHH3_k127_12877169_1 glucan 1,4-alpha-glucosidase activity - - - 0.0000000000000000000000000000000858 138.0
YHH3_k127_12882147_0 Glycosyltransferase, group 2 family protein - - - 0.00000000000000000000000000000000000000000000000000007725 199.0
YHH3_k127_12882147_1 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000004759 182.0
YHH3_k127_1289284_0 COG3119 Arylsulfatase A and related enzymes K01130 - 3.1.6.1 0.0 1200.0
YHH3_k127_1289284_1 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002514 472.0
YHH3_k127_1289284_2 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000286 461.0
YHH3_k127_1300254_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1131.0
YHH3_k127_1300254_1 PFAM NUDIX hydrolase K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000003414 214.0
YHH3_k127_1300254_2 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.00000000000000000000000000000000000149 140.0
YHH3_k127_1300254_3 Phage derived protein Gp49-like (DUF891) - - - 0.0000000000000000000000000000172 120.0
YHH3_k127_1300254_4 CopG antitoxin of type II toxin-antitoxin system - - - 0.0000000000000000413 82.0
YHH3_k127_1300254_5 Helix-turn-helix - - - 0.0000000000005512 72.0
YHH3_k127_1300254_6 PFAM UTP--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000007212 61.0
YHH3_k127_1303089_0 ATPase (AAA superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007482 433.0
YHH3_k127_1303089_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002261 284.0
YHH3_k127_1332510_0 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000004537 259.0
YHH3_k127_1332510_1 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000000001249 179.0
YHH3_k127_1332510_2 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000005001 153.0
YHH3_k127_1332510_3 O-antigen ligase like membrane protein - - - 0.000000000000000000001591 108.0
YHH3_k127_1332510_4 Phospholipid methyltransferase - - - 0.0000000000000000000108 98.0
YHH3_k127_1332510_5 integral membrane protein - - - 0.0000000000002508 78.0
YHH3_k127_1349800_0 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004098 292.0
YHH3_k127_1349800_1 Putative ATP-binding cassette K01992 - - 0.0000000000000000000000009278 120.0
YHH3_k127_1380488_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000000000000000000000000000000000000000001232 174.0
YHH3_k127_1396640_0 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 363.0
YHH3_k127_1396640_1 PFAM Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000000000002932 215.0
YHH3_k127_1402168_0 Belongs to the MtfA family K09933 - - 0.000000000000000000000000001484 115.0
YHH3_k127_1402168_1 long-chain fatty acid transporting porin activity - - - 0.00000000000000001523 95.0
YHH3_k127_1402168_2 ompA family - - - 0.00002502 56.0
YHH3_k127_1402168_3 cellulose binding - - - 0.00002703 56.0
YHH3_k127_1448951_0 metal-dependent phosphohydrolase HD region - - - 0.000000000000000000000000000000000000005925 159.0
YHH3_k127_1448951_1 protein involved in tolerance to K03926 - - 0.0000000000000000000000001346 111.0
YHH3_k127_1450592_0 SNF2 family N-terminal domain - - - 0.0 1607.0
YHH3_k127_1450592_1 Protein of unknown function (DUF499) K06922 - - 0.0 1495.0
YHH3_k127_1450592_2 Protein of unknown function (DUF1156) K07445 - - 1.065e-293 914.0
YHH3_k127_1450592_3 DNA methylAse K07445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003801 499.0
YHH3_k127_1450592_4 Putative DNA-binding domain K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 445.0
YHH3_k127_1450592_5 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007775 295.0
YHH3_k127_1686328_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000001712 207.0
YHH3_k127_1686328_1 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.00000000000000000000000000000296 131.0
YHH3_k127_1716712_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 585.0
YHH3_k127_1716712_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 392.0
YHH3_k127_1716712_2 Binds the 23S rRNA K02909 - - 0.0000000000000000000000404 106.0
YHH3_k127_1716712_3 iron-sulfur cluster assembly - - - 0.000005312 50.0
YHH3_k127_1724734_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 557.0
YHH3_k127_1724734_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 375.0
YHH3_k127_1724734_2 Transposase IS200 like - - - 0.00000000000000000000000000000000000000000000000000000000000000001649 235.0
YHH3_k127_1724734_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000008498 99.0
YHH3_k127_1724734_4 PFAM Hemerythrin HHE cation binding domain protein K07216 - - 0.00000000000000000182 91.0
YHH3_k127_1724734_5 - - - - 0.000000004388 64.0
YHH3_k127_1724734_6 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0002045 45.0
YHH3_k127_1724907_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002324 339.0
YHH3_k127_1724907_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000002591 270.0
YHH3_k127_1724907_2 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000007815 178.0
YHH3_k127_173024_0 ferrous iron transmembrane transporter activity K04759 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002323 352.0
YHH3_k127_173024_1 PFAM Integral membrane protein TerC K05794 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 323.0
YHH3_k127_173024_2 EXOIII K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000002669 232.0
YHH3_k127_173024_3 PFAM iron dependent repressor K03709 - - 0.00000000000000000000000000000000000000000000003638 177.0
YHH3_k127_1776174_0 Ammonium Transporter K03320 - - 0.0000000000000000000000000000000000000001733 153.0
YHH3_k127_1776174_1 Belongs to the P(II) protein family K04751,K04752 - - 0.000000000000000000000000000000000009123 138.0
YHH3_k127_1776174_2 response regulator K02657 - - 0.0000000000000007482 83.0
YHH3_k127_1776174_3 UvrD REP helicase K16898 - 3.6.4.12 0.0000000001227 65.0
YHH3_k127_1790169_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K06001 - 4.2.1.20 9.672e-240 747.0
YHH3_k127_1790169_1 ribonuclease Rne Rng family K08300,K08301 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008133 385.0
YHH3_k127_1790169_2 cytokinin biosynthetic process K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 332.0
YHH3_k127_1790169_3 Belongs to the SEDS family. MrdB RodA subfamily K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003215 260.0
YHH3_k127_1790169_4 ATPase associated with various cellular K03924 - - 0.00000000000000000000000000000000000000000003547 163.0
YHH3_k127_1808933_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008397 355.0
YHH3_k127_1808933_1 orotate phosphoribosyltransferase activity K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000003174 215.0
YHH3_k127_1808933_2 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.00000000000000000000000000000004442 128.0
YHH3_k127_1808933_3 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000003782 73.0
YHH3_k127_1863309_0 DNA photolyase K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 329.0
YHH3_k127_1863309_1 ATPase (AAA superfamily) K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004848 275.0
YHH3_k127_187363_0 Type I restriction enzyme R protein N terminus (HSDR_N) K01153 - 3.1.21.3 0.0 1480.0
YHH3_k127_187363_1 transcriptional regulator K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 552.0
YHH3_k127_187363_2 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007046 301.0
YHH3_k127_187363_3 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006964 273.0
YHH3_k127_187363_4 PFAM restriction modification system DNA specificity domain K01154 - 3.1.21.3 0.00000000000000000000000000000000000000000000000000000000001294 216.0
YHH3_k127_187363_5 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000000000000744 173.0
YHH3_k127_187363_6 Psort location Cytoplasmic, score 8.87 - - - 0.00000000000000000003109 94.0
YHH3_k127_187363_7 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.0006089 44.0
YHH3_k127_1898027_0 PFAM NADH flavin oxidoreductase NADH oxidase K10680 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009076 459.0
YHH3_k127_1898027_1 Domain of unknown function (DUF4143) K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 427.0
YHH3_k127_1898027_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004652 357.0
YHH3_k127_1898027_3 MltA-interacting MipA family protein K07274 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 334.0
YHH3_k127_1898027_4 - - - - 0.000000008477 64.0
YHH3_k127_1940746_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000009264 68.0
YHH3_k127_1965863_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 5.871e-221 692.0
YHH3_k127_1965863_1 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000002128 110.0
YHH3_k127_1965863_2 overlaps another CDS with the same product name - - - 0.0000000006307 70.0
YHH3_k127_1986527_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 1.515e-308 966.0
YHH3_k127_1986527_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 4.907e-253 807.0
YHH3_k127_1986527_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003623 503.0
YHH3_k127_1986527_3 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.0000000000000000000000000000000000000000000000000000000000000000005184 244.0
YHH3_k127_1986527_4 - - - - 0.00000000000000000000000000000000004368 144.0
YHH3_k127_1986527_5 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000133 100.0
YHH3_k127_1986527_6 - - - - 0.00003184 54.0
YHH3_k127_1998020_0 chelatase, subunit ChlI K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 565.0
YHH3_k127_1998020_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 323.0
YHH3_k127_2025838_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 299.0
YHH3_k127_2025838_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01007,K08483 - 2.7.3.9,2.7.9.2 0.0000000000000000000000004502 126.0
YHH3_k127_2041720_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 614.0
YHH3_k127_2041720_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 465.0
YHH3_k127_2041720_2 Belongs to the Dps family K04047 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003845 248.0
YHH3_k127_2041720_3 - - - - 0.000000000000000001112 99.0
YHH3_k127_2041720_4 cell adhesion K02650,K02682 - - 0.000000003693 64.0
YHH3_k127_2046421_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 461.0
YHH3_k127_2050148_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008806 366.0
YHH3_k127_2050148_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000001277 171.0
YHH3_k127_2050148_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000001928 160.0
YHH3_k127_2088626_0 ABC transporter, substratebinding protein K02027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001737 271.0
YHH3_k127_2126544_0 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007369 514.0
YHH3_k127_2126544_1 Protein of unknown function (DUF3106) - - - 0.0002645 47.0
YHH3_k127_2180927_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008818 416.0
YHH3_k127_2180927_1 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000004297 91.0
YHH3_k127_218846_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688,K18786 - 2.4.1.321 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009103 509.0
YHH3_k127_218846_1 Glycosyl hydrolase 36 superfamily, catalytic domain K13688,K18786 - 2.4.1.321 0.00000000000001224 86.0
YHH3_k127_2189030_0 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 314.0
YHH3_k127_2189030_1 tRNA nucleotidyltransferase poly(A) polymerase K00970,K00974 - 2.7.7.19,2.7.7.72 0.00000000000000000000000000000000000000000000006042 180.0
YHH3_k127_2189030_2 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000001416 138.0
YHH3_k127_2189030_3 Right handed beta helix region - - - 0.000003676 59.0
YHH3_k127_2189030_4 nuclear chromosome segregation - - - 0.0005491 44.0
YHH3_k127_2206520_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001362 246.0
YHH3_k127_2206520_1 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000002157 233.0
YHH3_k127_2206520_2 Glycosyl transferase family 21 K10211 - - 0.0000000000000000000000000000000000000000000005631 174.0
YHH3_k127_2206520_3 carotenoid biosynthetic process K10212 - - 0.000000000000000000000000000001264 133.0
YHH3_k127_2206520_4 Transposase DDE domain - - - 0.00000001502 58.0
YHH3_k127_2206520_5 FlgD Ig-like domain - - - 0.0009684 46.0
YHH3_k127_2258517_0 PDZ domain (Also known as DHR K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 304.0
YHH3_k127_2268467_0 PFAM HI0933-like protein K07007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 464.0
YHH3_k127_2268467_1 Beta-Casp domain K07576,K07577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 366.0
YHH3_k127_2268467_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008333 301.0
YHH3_k127_2268467_3 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000001599 199.0
YHH3_k127_2268467_4 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.00000000000000000000000000000000000000119 149.0
YHH3_k127_2268467_5 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity K02372,K16363 - 3.5.1.108,4.2.1.59 0.00000000000000000000000000000000000009215 148.0
YHH3_k127_2268467_6 Nitroreductase - - - 0.000000000003925 72.0
YHH3_k127_2268467_7 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000768 73.0
YHH3_k127_2269146_0 Large extracellular alpha-helical protein K06894 - - 0.0 1979.0
YHH3_k127_2269146_1 ABC-type uncharacterized transport system K01992 - - 0.0 1095.0
YHH3_k127_2269146_10 - - - - 0.000000000000000000000005814 111.0
YHH3_k127_2269146_11 Alpha amylase, catalytic domain K01176 - 3.2.1.1 0.000000000000000000001377 96.0
YHH3_k127_2269146_12 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000001176 104.0
YHH3_k127_2269146_13 - - - - 0.0000001514 64.0
YHH3_k127_2269146_14 Appr-1-p processing domain protein - - - 0.000001564 59.0
YHH3_k127_2269146_2 Pyridine nucleotide-disulphide oxidoreductase K00384,K21567 - 1.18.1.2,1.19.1.1,1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 412.0
YHH3_k127_2269146_3 heat shock protein binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 383.0
YHH3_k127_2269146_4 COG1131 ABC-type multidrug transport system, ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 348.0
YHH3_k127_2269146_5 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 343.0
YHH3_k127_2269146_6 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001324 285.0
YHH3_k127_2269146_7 heat shock protein binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001394 274.0
YHH3_k127_2269146_8 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000007443 246.0
YHH3_k127_2269146_9 Domain of unknown function (DUF4340) - - - 0.0000000000000000000000000000000000000000000000000732 189.0
YHH3_k127_2271350_0 Belongs to the CinA family K03742,K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000001359 225.0
YHH3_k127_2314377_0 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000001802 211.0
YHH3_k127_2314377_1 PFAM lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000003438 171.0
YHH3_k127_2314377_2 COG0720 6-pyruvoyl-tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000001083 162.0
YHH3_k127_2314377_3 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.00000000000005015 76.0
YHH3_k127_2356572_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 340.0
YHH3_k127_2356572_1 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002475 277.0
YHH3_k127_2356572_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000002691 106.0
YHH3_k127_2356572_3 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000003112 91.0
YHH3_k127_2356572_4 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000002409 63.0
YHH3_k127_2365015_0 glutamine-fructose-6-phosphate transaminase (isomerizing) activity - - - 0.000000000000000000000001988 122.0
YHH3_k127_2403918_0 SpoIID LytB domain protein K06381 - - 0.00000000000000000000000000000000000000000000000000000003379 214.0
YHH3_k127_2403918_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000003748 197.0
YHH3_k127_2403918_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000003022 124.0
YHH3_k127_2403918_3 Protein of unknown function (DUF559) - - - 0.0000000000000000000000000000007475 127.0
YHH3_k127_2439379_0 uridine kinase K00876 - 2.7.1.48 0.000002042 52.0
YHH3_k127_2440112_0 ATPase (AAA superfamily K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006581 453.0
YHH3_k127_2440112_1 histidine kinase A domain protein K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000576 301.0
YHH3_k127_2440112_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000003374 122.0
YHH3_k127_2440112_3 PFAM ATP-binding region, ATPase domain protein - - - 0.000000000000000000004613 109.0
YHH3_k127_2440112_4 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000002326 90.0
YHH3_k127_2511357_0 involved in cell wall biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005563 336.0
YHH3_k127_2511357_1 phospho-N-acetylmuramoyl-pentapeptide-transferase activity K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000001272 214.0
YHH3_k127_2511357_2 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000000000000000002556 171.0
YHH3_k127_2511357_3 protoporphyrinogen oxidase activity K01854 - 5.4.99.9 0.000000000000000000000000003245 114.0
YHH3_k127_2511357_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000004557 111.0
YHH3_k127_2511357_5 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000004605 59.0
YHH3_k127_2514642_0 ompA family - - - 0.000002188 57.0
YHH3_k127_2514642_1 Protein of Unknown function (DUF2784) - - - 0.0003293 49.0
YHH3_k127_2568599_0 PFAM aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 473.0
YHH3_k127_2568599_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 369.0
YHH3_k127_2568599_2 Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000000000000000000000000006812 211.0
YHH3_k127_2568599_3 PFAM peptidase M48 Ste24p - - - 0.00000000000000000000000000000000000000000002942 178.0
YHH3_k127_2568599_4 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.00000000000000000000000000000000000168 154.0
YHH3_k127_2568599_5 PFAM plasmid stabilization system K06218 - - 0.0000000000000000008653 89.0
YHH3_k127_2568599_6 PFAM Protein kinase domain K05385,K12132,K13590 - 2.7.11.1,2.7.7.65 0.000000000000001432 91.0
YHH3_k127_2568599_7 - - - - 0.0000000000001466 79.0
YHH3_k127_2568599_8 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000005061 55.0
YHH3_k127_2568599_9 - - - - 0.00000006016 57.0
YHH3_k127_2605938_0 Parallel beta-helix repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000005477 253.0
YHH3_k127_2605938_1 Parallel beta-helix repeats - - - 0.000000000000000000000000000000000000000000000000000000000000001756 240.0
YHH3_k127_2605938_2 TIGRFAM para-aminobenzoate synthase, subunit I K01665,K03342 - 2.6.1.85,4.1.3.38 0.0000000000000000000000000000000004583 135.0
YHH3_k127_2605938_4 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins - - - 0.00000000000000005472 87.0
YHH3_k127_2605938_5 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.00000003189 60.0
YHH3_k127_2621776_0 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000002353 245.0
YHH3_k127_2627445_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007132 286.0
YHH3_k127_26427_0 Site-specific recombinase, DNA invertase Pin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001579 262.0
YHH3_k127_26427_1 Domain of unknown function (DUF4870) - - - 0.0000006807 54.0
YHH3_k127_267381_0 ABC-type sugar transport system, permease component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007316 280.0
YHH3_k127_267381_1 ABC transporter permease K02025,K10193 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006523 285.0
YHH3_k127_267381_2 F5/8 type C domain - - - 0.000000000002839 78.0
YHH3_k127_2734908_0 ABC transporter K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006804 399.0
YHH3_k127_2734908_1 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 349.0
YHH3_k127_2734908_10 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000001691 183.0
YHH3_k127_2734908_11 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000003371 161.0
YHH3_k127_2734908_12 diguanylate cyclase - - - 0.000000000000000000000000000000000000002702 164.0
YHH3_k127_2734908_13 diguanylate cyclase - - - 0.000000000000000000000000001541 128.0
YHH3_k127_2734908_14 PFAM VanZ family protein - - - 0.0000000000000004524 85.0
YHH3_k127_2734908_15 serine threonine protein kinase K08884,K12132 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018107,GO:0018193,GO:0018210,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0036211,GO:0042304,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 2.7.11.1 0.00000000000005315 83.0
YHH3_k127_2734908_16 - - - - 0.0001485 52.0
YHH3_k127_2734908_17 Protein involved in outer membrane biogenesis K07289 - - 0.0002409 53.0
YHH3_k127_2734908_2 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006003 310.0
YHH3_k127_2734908_3 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007903 297.0
YHH3_k127_2734908_4 Elongator protein 3, MiaB family, Radical SAM K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003671 281.0
YHH3_k127_2734908_5 Belongs to the ribulose-phosphate 3-epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000317 246.0
YHH3_k127_2734908_6 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000007939 240.0
YHH3_k127_2734908_7 Secondary thiamine-phosphate synthase enzyme - - - 0.00000000000000000000000000000000000000000000000000000000001733 208.0
YHH3_k127_2734908_8 Lytic transglycosylase catalytic K08307 - - 0.00000000000000000000000000000000000000000000000000000003375 218.0
YHH3_k127_2734908_9 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000001972 192.0
YHH3_k127_2738495_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 357.0
YHH3_k127_2738495_1 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0000000000000000000000000000000000000000000000000004023 192.0
YHH3_k127_2738495_2 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000002467 136.0
YHH3_k127_2738495_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000691 53.0
YHH3_k127_276595_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 433.0
YHH3_k127_276595_1 Belongs to the LDH MDH superfamily. LDH family K00016,K00024 - 1.1.1.27,1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 400.0
YHH3_k127_276595_2 HD domain - - - 0.000000000000000000000000000000000000000000000000000006514 205.0
YHH3_k127_276595_3 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000003612 88.0
YHH3_k127_2783760_0 Type III restriction enzyme res subunit K01156 - 3.1.21.5 0.0 1292.0
YHH3_k127_2783760_1 DNA methylase K07316 - 2.1.1.72 0.0 1065.0
YHH3_k127_2783760_2 PFAM FAD dependent oxidoreductase K07137 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 581.0
YHH3_k127_2783760_3 Protein of unknown function (DUF1016) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 475.0
YHH3_k127_2783760_4 Domain of unknown function (DUF4143) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 396.0
YHH3_k127_2783760_5 HI0933 family K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004439 377.0
YHH3_k127_2783760_6 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000003321 126.0
YHH3_k127_2787406_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 328.0
YHH3_k127_2787406_1 PFAM membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.00000000000000000000000000000000000000000000000000000000000001229 232.0
YHH3_k127_2787406_2 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000009605 221.0
YHH3_k127_2787406_3 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000005702 222.0
YHH3_k127_2787406_4 PFAM ATP-binding region, ATPase domain protein K07636 - 2.7.13.3 0.000000000000000009966 98.0
YHH3_k127_2787406_5 RHS repeat-associated core domain protein - - - 0.00000000000000214 91.0
YHH3_k127_2787406_6 Amidohydrolase K07045 - - 0.000000000004237 77.0
YHH3_k127_2845620_0 General secretory system II, protein E domain protein K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 381.0
YHH3_k127_2845620_1 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000001005 155.0
YHH3_k127_2845620_2 - - - - 0.0000000000000000001787 92.0
YHH3_k127_2845620_3 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000003496 57.0
YHH3_k127_2845620_4 PBS lyase HEAT domain protein repeat-containing protein - - - 0.0001088 53.0
YHH3_k127_2875287_0 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000000000000001598 188.0
YHH3_k127_2875287_1 PD-(D/E)XK nuclease superfamily - - - 0.0000000000003632 80.0
YHH3_k127_288560_0 Beta-propeller repeat - - - 0.000000000000000000000000000000000000000000003225 188.0
YHH3_k127_2908179_0 Transposase IS200 like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003879 293.0
YHH3_k127_2908179_1 Non-essential cell division protein that could be required for efficient cell constriction - - - 0.000000000000000000000000002929 125.0
YHH3_k127_2908179_2 - - - - 0.000000000005106 77.0
YHH3_k127_2908179_3 PFAM Transposase K07481 - - 0.00000126 54.0
YHH3_k127_2908179_8 - - - - 0.0003308 53.0
YHH3_k127_2908179_9 Transposase IS200 like - - - 0.0004358 48.0
YHH3_k127_2912996_0 ATPase (AAA superfamily) K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007956 479.0
YHH3_k127_2912996_1 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007174 446.0
YHH3_k127_2912996_2 ABC-type multidrug transport system, ATPase component K13926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006717 442.0
YHH3_k127_2912996_3 MarC family integral membrane protein K05595 - - 0.0000000000000000000000000000000000000000000002074 173.0
YHH3_k127_2912996_4 Protein of unknown function (DUF2442) - - - 0.000000000000000000004939 96.0
YHH3_k127_2933978_0 type II secretion system protein K02243,K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007396 335.0
YHH3_k127_2933978_1 phosphate acetyltransferase K00029,K00625,K13788 - 1.1.1.40,2.3.1.8 0.00000000000000000000000000000000000001578 147.0
YHH3_k127_2955449_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 447.0
YHH3_k127_2955449_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000002731 242.0
YHH3_k127_2955449_2 binds to the 23S rRNA K02876 - - 0.000000000000000000000002731 104.0
YHH3_k127_2960299_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006732 620.0
YHH3_k127_2960299_1 Protein of unknown function (DUF2442) - - - 0.000000000000000000000008626 102.0
YHH3_k127_2960299_2 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000003635 79.0
YHH3_k127_2964611_0 Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009245 419.0
YHH3_k127_2964611_1 Domain of unknown function (DUF4301) - - - 0.000000000000000000000000000000000000000000000000000000009199 205.0
YHH3_k127_2964611_2 Protein of unknown function DUF86 - - - 0.00000000000000000000001513 106.0
YHH3_k127_2964611_3 nucleotidyltransferase activity - - - 0.00000000000000000007686 94.0
YHH3_k127_2993385_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 1.22e-313 986.0
YHH3_k127_2999199_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000002147 207.0
YHH3_k127_2999199_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.00000000000000000000000000000007239 126.0
YHH3_k127_2999199_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000004905 133.0
YHH3_k127_2999199_3 PFAM response regulator receiver K02483,K07658,K07668 - - 0.00000000000000005934 85.0
YHH3_k127_2999199_4 - - - - 0.00000008472 55.0
YHH3_k127_2999199_5 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000002322 60.0
YHH3_k127_3001772_0 Belongs to the glycosyl hydrolase 8 (cellulase D) family - - - 0.0000000000003824 82.0
YHH3_k127_3001772_1 long-chain fatty acid transport protein - - - 0.000000000000857 79.0
YHH3_k127_3001772_3 hydrolase, family 9 K01179 - 3.2.1.4 0.0001137 51.0
YHH3_k127_3102575_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0002790,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006457,GO:0006605,GO:0006810,GO:0006886,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015627,GO:0015628,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032991,GO:0033036,GO:0033220,GO:0034613,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042802,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061077,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:0098776,GO:1901265,GO:1901363,GO:1904680 - 8.818e-293 927.0
YHH3_k127_3102575_1 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K10778 - 2.1.1.63 0.000000000000000004907 84.0
YHH3_k127_3105602_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000000000000000000000000000000000000000005464 248.0
YHH3_k127_3125230_0 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 322.0
YHH3_k127_3125230_1 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000003992 156.0
YHH3_k127_3125230_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000002869 145.0
YHH3_k127_3125230_3 Fungal specific transcription factor domain - - - 0.00001161 56.0
YHH3_k127_314853_0 alpha amylase catalytic K01182,K05343 - 3.2.1.1,3.2.1.10,5.4.99.16 0.0 1202.0
YHH3_k127_314853_1 stress-induced mitochondrial fusion - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003654 282.0
YHH3_k127_314853_2 protein phosphatase 2C domain protein K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000008342 202.0
YHH3_k127_314853_3 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000003443 188.0
YHH3_k127_314853_4 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000003821 150.0
YHH3_k127_314853_5 OmpA family K02557 - - 0.00000000000000000000000000000000003308 144.0
YHH3_k127_314853_6 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000000001489 116.0
YHH3_k127_314853_7 Could be involved in septation K06412 - - 0.000000000000000000000002283 105.0
YHH3_k127_314853_8 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000000000000000000007969 109.0
YHH3_k127_314853_9 - - - - 0.0001562 45.0
YHH3_k127_3188000_0 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003308 298.0
YHH3_k127_3188000_1 thiamine biosynthesis protein ThiS K03154 - - 0.0000000007025 64.0
YHH3_k127_3188000_2 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K02343,K03642,K08652,K13733,K14195,K20382 - 2.7.7.7,3.4.21.110 0.0003492 53.0
YHH3_k127_3218108_0 protein conserved in bacteria K09973 - - 0.0000000000000000292 94.0
YHH3_k127_3285643_0 PFAM Nickel-dependent hydrogenase, large subunit K00436,K14126,K17993 - 1.12.1.2,1.12.1.3,1.12.1.5,1.8.98.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004234 452.0
YHH3_k127_3285643_1 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.0000000000000000000002508 98.0
YHH3_k127_3285643_2 hydrogenase maturation protease K03605 - - 0.0000000004963 67.0
YHH3_k127_3302459_0 Iron hydrogenase small subunit K00336,K18006 - 1.12.1.2,1.6.5.3 8.144e-269 838.0
YHH3_k127_3302459_1 NADH ubiquinone oxidoreductase NADH-binding (51 kD) subunit K00335,K18331 - 1.12.1.3,1.6.5.3 1.475e-201 640.0
YHH3_k127_3302459_2 Cytochrome C biogenesis protein transmembrane region - - - 0.0000000000000000000000000000000000000000000000000000000000000000289 229.0
YHH3_k127_3302459_3 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.00000000000000000000000000000000000000000000000000001396 195.0
YHH3_k127_3302459_4 Respiratory-chain NADH dehydrogenase 24 Kd subunit K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000002241 188.0
YHH3_k127_3302459_5 nickel cation binding K04651 - - 0.000000000000000003918 88.0
YHH3_k127_3302459_6 Hydrogenase maturation protease K03605 - - 0.0000002198 55.0
YHH3_k127_3350949_0 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000000000000000001726 195.0
YHH3_k127_3350949_1 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000003927 169.0
YHH3_k127_3350949_2 PFAM OmpA MotB domain protein K03640 - - 0.000000000000000000000000003337 118.0
YHH3_k127_3350949_3 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - GO:0005575,GO:0005623,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043933,GO:0044085,GO:0044464,GO:0051259,GO:0051260,GO:0051301,GO:0065003,GO:0071840 - 0.0000000000001222 81.0
YHH3_k127_3363873_0 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004883 284.0
YHH3_k127_3363873_1 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.0000000000000597 79.0
YHH3_k127_3363873_2 Cell division protein FtsJ - - - 0.00000000008382 65.0
YHH3_k127_3404128_0 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000002288 259.0
YHH3_k127_3404128_1 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.00000000000000000000000000000000000001051 158.0
YHH3_k127_3404128_2 pilus organization - - - 0.0001117 54.0
YHH3_k127_3444688_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003109 326.0
YHH3_k127_3476426_0 TIGRFAM phosphate binding protein K02040 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006929 443.0
YHH3_k127_3476426_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 381.0
YHH3_k127_3476426_2 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008092 370.0
YHH3_k127_3476426_3 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000004434 231.0
YHH3_k127_3476426_4 - - - - 0.00000000000000000000000000000000000000007411 156.0
YHH3_k127_3476426_5 Putative porin - GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000000000000000000000000000001403 137.0
YHH3_k127_3479354_0 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 532.0
YHH3_k127_3479354_1 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000003848 187.0
YHH3_k127_3479354_2 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000006119 167.0
YHH3_k127_3479354_3 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.000000000000000000000000000000000000001623 153.0
YHH3_k127_3479354_4 thiamine-phosphate diphosphorylase activity K00788 - 2.5.1.3 0.000000000000000001665 91.0
YHH3_k127_3479354_5 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000009448 51.0
YHH3_k127_3499144_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001116 277.0
YHH3_k127_3499144_1 Phage Tail Collar Domain - - - 0.0000000000000000000000000000000001996 136.0
YHH3_k127_3499144_2 Glycosyl transferases group 1 K02844 - - 0.0000000000000000000001445 110.0
YHH3_k127_3499144_3 tail collar domain protein - - - 0.0002058 53.0
YHH3_k127_3565619_0 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003887 278.0
YHH3_k127_3565619_1 - - - - 0.000000000000000000000000000000000000000000000000000000000003472 226.0
YHH3_k127_3565619_2 PFAM Methyltransferase type - - - 0.00000000001133 74.0
YHH3_k127_3674505_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.11.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 410.0
YHH3_k127_3674505_1 Cro/C1-type HTH DNA-binding domain - - - 0.000009178 50.0
YHH3_k127_3679053_0 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 3.285e-234 736.0
YHH3_k127_3679053_1 TIGRFAM Succinate dehydrogenase, cytochrome b556 subunit K00241 - - 0.000000000000000000000000000001774 124.0
YHH3_k127_3679053_2 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.000000000000000000000000001357 117.0
YHH3_k127_3679053_3 COGs COG3377 conserved - - - 0.000000000001958 69.0
YHH3_k127_3679979_0 PFAM ABC transporter related K02013 - 3.6.3.34 0.00000000000000000177 89.0
YHH3_k127_3679979_1 ABC 3 transport family K09819,K19976 - - 0.000000000000009763 85.0
YHH3_k127_3683203_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 3.496e-256 811.0
YHH3_k127_3683203_1 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006571 322.0
YHH3_k127_3683203_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000008567 94.0
YHH3_k127_3739481_0 Domain of unknown function K03737 - 1.2.7.1 0.0 1624.0
YHH3_k127_3739481_1 Sulfatase - - - 7.524e-308 953.0
YHH3_k127_3739481_2 Flotillin K07192 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007417 498.0
YHH3_k127_3739481_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 389.0
YHH3_k127_3739481_4 - - - - 0.000000000631 64.0
YHH3_k127_3739481_5 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system - - - 0.0002425 44.0
YHH3_k127_3739481_6 Protein conserved in bacteria - - - 0.0003371 47.0
YHH3_k127_3749199_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1351.0
YHH3_k127_3749199_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004505 454.0
YHH3_k127_3749199_2 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 445.0
YHH3_k127_3749199_3 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 437.0
YHH3_k127_3749199_4 Protein conserved in bacteria - - - 0.00000003112 66.0
YHH3_k127_3749199_5 penicillin-binding protein - - - 0.00000263 59.0
YHH3_k127_3770029_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 330.0
YHH3_k127_3770029_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005595 301.0
YHH3_k127_3770029_2 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001085 275.0
YHH3_k127_3770029_3 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000003339 276.0
YHH3_k127_3770029_4 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000001416 107.0
YHH3_k127_3819225_0 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000001569 240.0
YHH3_k127_3862868_0 Arginyl tRNA synthetase N terminal dom K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 460.0
YHH3_k127_3866081_0 Heat shock 70 kDa protein K04043 - - 8.645e-209 666.0
YHH3_k127_3866081_1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000071 509.0
YHH3_k127_3866081_2 TIGRFAM pyruvate ferredoxin flavodoxin oxidoreductase, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009917 321.0
YHH3_k127_3866081_3 ADP-glyceromanno-heptose 6-epimerase activity K03274 GO:0000166,GO:0000271,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008712,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016853,GO:0016854,GO:0016857,GO:0033692,GO:0034637,GO:0034645,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0048037,GO:0050661,GO:0050662,GO:0070401,GO:0071704,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901576,GO:1903509 5.1.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004157 292.0
YHH3_k127_3866081_4 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000003773 245.0
YHH3_k127_3866081_5 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.0000000000000000000000000000004389 123.0
YHH3_k127_3866081_6 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.000000000000000000003041 101.0
YHH3_k127_3866081_7 TIGRFAM DJ-1 family protein K03152 - 3.5.1.124 0.000000000000000000062 93.0
YHH3_k127_3866165_0 Belongs to the pirin family K06911 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000002775 249.0
YHH3_k127_3866165_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000004976 195.0
YHH3_k127_3866165_2 Monogalactosyldiacylglycerol synthase, C-terminal domain protein K03429 - 2.4.1.315 0.00000000000000000000000000000000000000000002485 165.0
YHH3_k127_3866165_3 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000009791 161.0
YHH3_k127_3878778_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.000000000000000000000000000000000000000000000000001662 192.0
YHH3_k127_3878778_1 LysM domain - - - 0.000000000001288 79.0
YHH3_k127_3878778_2 DNA protecting protein DprA K04096 - - 0.00000000003844 70.0
YHH3_k127_3933307_0 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase K04034 GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015994,GO:0015995,GO:0018130,GO:0019438,GO:0030493,GO:0030494,GO:0033013,GO:0033014,GO:0034641,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.21.98.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 427.0
YHH3_k127_3933307_1 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006726 273.0
YHH3_k127_3933307_2 polysaccharide biosynthetic process K19431 - - 0.00000000000000000000539 107.0
YHH3_k127_3933307_3 Methyltransferase domain K00588 - 2.1.1.104 0.0006958 50.0
YHH3_k127_3935943_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 2.002e-257 822.0
YHH3_k127_3935943_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009587 275.0
YHH3_k127_3935943_2 Domain of unknown function (DUF4143) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002249 276.0
YHH3_k127_3935943_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000001657 212.0
YHH3_k127_3935943_4 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000001854 138.0
YHH3_k127_3935943_5 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000007022 92.0
YHH3_k127_395293_0 Carbon starvation protein K06200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 546.0
YHH3_k127_395293_1 Domain of unknown function (DUF1731) K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 315.0
YHH3_k127_395293_2 MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000005536 98.0
YHH3_k127_395293_3 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.0000000000000211 79.0
YHH3_k127_395293_4 ATPase, AAA superfamily K06921 - - 0.0000000001017 64.0
YHH3_k127_3972370_0 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate K10206 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 325.0
YHH3_k127_3972370_1 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000003963 188.0
YHH3_k127_3983777_0 N-4 methylation of cytosine K00590 - 2.1.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006638 463.0
YHH3_k127_3983777_1 PhoQ Sensor - - - 0.00000000000000000000000000000000000000002286 163.0
YHH3_k127_3998250_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004251 539.0
YHH3_k127_3998250_1 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000001129 210.0
YHH3_k127_3998250_2 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000001958 152.0
YHH3_k127_4046587_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 541.0
YHH3_k127_4046587_1 TIGRFAM argininosuccinate lyase K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004798 390.0
YHH3_k127_4183780_0 Ankyrin repeats (many copies) - - - 0.00000000000000001793 96.0
YHH3_k127_4183780_1 Prokaryotic N-terminal methylation motif K02650,K02655 GO:0005575,GO:0005623,GO:0009289,GO:0042995,GO:0044464 - 0.000000006179 64.0
YHH3_k127_4183780_2 domain protein - - - 0.000001619 61.0
YHH3_k127_4206447_0 B12 binding domain K00548 - 2.1.1.13 0.0 1307.0
YHH3_k127_4206447_1 PEP-utilising enzyme, mobile domain K01006 - 2.7.9.1 0.0 1105.0
YHH3_k127_4206447_2 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009805 485.0
YHH3_k127_4206447_3 Cysteine desulfurase K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000005015 264.0
YHH3_k127_4206447_4 RNA polymerase sigma factor K03088 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016987,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0043254,GO:0044087,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.00000000000000000000000000000000000000000000000003425 185.0
YHH3_k127_4206447_5 Arsenate reductase and related K00537 - 1.20.4.1 0.00000000000000000001361 96.0
YHH3_k127_4206447_6 Bacterial membrane protein, YfhO - - - 0.000000000007381 79.0
YHH3_k127_4206447_7 Putative zinc-finger - - - 0.0000000009616 64.0
YHH3_k127_4254408_0 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000374 365.0
YHH3_k127_4254408_1 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000001404 215.0
YHH3_k127_4254408_2 PFAM response regulator receiver K02483,K07658,K07668 - - 0.0000000000000000000000000000000000000000000000000000009257 210.0
YHH3_k127_4254408_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000005983 195.0
YHH3_k127_4254408_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000007334 140.0
YHH3_k127_4254408_5 Fibronectin type III domain - - - 0.00000003264 69.0
YHH3_k127_4254408_6 Hep Hag repeat protein - - - 0.0000000419 63.0
YHH3_k127_4286286_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005515 370.0
YHH3_k127_4286286_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000004756 198.0
YHH3_k127_4286286_10 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000006418 51.0
YHH3_k127_4286286_11 Outer membrane lipoprotein - - - 0.0002049 52.0
YHH3_k127_4286286_2 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 GO:0003674,GO:0003824,GO:0003999,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006168,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009113,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.7 0.0000000000000000000000000000000000000000000000000006198 192.0
YHH3_k127_4286286_3 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.000000000000000000000000000000000000000000000002014 179.0
YHH3_k127_4286286_4 TIGRFAM phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.00000000000000000000000000000000000000006275 156.0
YHH3_k127_4286286_5 Monogalactosyldiacylglycerol (MGDG) synthase - - - 0.0000000000000000000000000000000000003777 146.0
YHH3_k127_4286286_6 Bacterial lipid A biosynthesis acyltransferase - - - 0.000000000000000000000000004585 122.0
YHH3_k127_4286286_7 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000464 112.0
YHH3_k127_4286286_8 PFAM acylphosphatase K01512 - 3.6.1.7 0.0000000000001243 75.0
YHH3_k127_4286286_9 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000003169 68.0
YHH3_k127_4291589_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 3.132e-232 734.0
YHH3_k127_4291589_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016625,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0030312,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046872,GO:0047553,GO:0055114,GO:0071704,GO:0071944,GO:0072350 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007954 409.0
YHH3_k127_4291589_10 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases - - - 0.000000006216 73.0
YHH3_k127_4291589_11 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 GO:0006355,GO:0006464,GO:0006807,GO:0006808,GO:0007154,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0018175,GO:0018177,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070887,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0080090,GO:0090293,GO:1901564,GO:1901698,GO:1901699,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 2.7.7.59 0.00005232 60.0
YHH3_k127_4291589_12 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 GO:0006355,GO:0006464,GO:0006807,GO:0006808,GO:0007154,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0018175,GO:0018177,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070887,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0080090,GO:0090293,GO:1901564,GO:1901698,GO:1901699,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 2.7.7.59 0.0002058 58.0
YHH3_k127_4291589_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 388.0
YHH3_k127_4291589_3 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003723 370.0
YHH3_k127_4291589_4 Domain of unknown function (DUF4143) K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 326.0
YHH3_k127_4291589_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000028 164.0
YHH3_k127_4291589_6 Helix-turn-helix XRE-family like proteins K21498 - - 0.000000000000000000000000009486 111.0
YHH3_k127_4291589_7 Plasmid maintenance system killer K07334 - - 0.00000000000000000000000001052 112.0
YHH3_k127_4291589_8 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000006513 111.0
YHH3_k127_4291589_9 CBS domain - - - 0.00000000000000000003846 96.0
YHH3_k127_4317038_0 ABC transporter - - - 2.957e-210 667.0
YHH3_k127_4317038_1 - K06921 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 324.0
YHH3_k127_4317038_2 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000001191 233.0
YHH3_k127_4317038_3 D-alanyl-D-alanine carboxypeptidase K07260 - 3.4.17.14 0.00000000000000000000000000000000000000000000000000007007 193.0
YHH3_k127_4317038_4 Protein of unknown function (DUF819) - - - 0.00000121 56.0
YHH3_k127_4317996_0 - - - - 0.0001744 49.0
YHH3_k127_4317996_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0003939 53.0
YHH3_k127_438866_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 350.0
YHH3_k127_438866_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007401 322.0
YHH3_k127_438866_2 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000174 275.0
YHH3_k127_4392938_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.631e-210 672.0
YHH3_k127_4392938_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000003183 267.0
YHH3_k127_4392938_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0002898 49.0
YHH3_k127_4400277_0 Sigma-70 factor, region 1.1 K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 366.0
YHH3_k127_4400277_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000324 323.0
YHH3_k127_4400277_2 PFAM Histidine triad (HIT) protein K02503 - - 0.00000000000000000000000000000000000007268 146.0
YHH3_k127_4400277_3 manually curated - - - 0.0000000000000000000000000000001148 125.0
YHH3_k127_4400277_4 - - - - 0.0000000000001138 72.0
YHH3_k127_4400277_5 - - - - 0.0000000000005499 76.0
YHH3_k127_4400277_6 C4-type zinc ribbon domain K07164 - - 0.000000000001127 77.0
YHH3_k127_4400277_7 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000004445 66.0
YHH3_k127_4400277_8 - - - - 0.0000000001567 70.0
YHH3_k127_4400277_9 Protein of unknown function - - - 0.0005953 52.0
YHH3_k127_4426338_0 ORF6N domain - - - 0.000000000000000000000000000000000000000001394 165.0
YHH3_k127_4447491_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity - - - 5.079e-250 781.0
YHH3_k127_4451952_0 uridine kinase K00876 - 2.7.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 384.0
YHH3_k127_4451952_1 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000001947 88.0
YHH3_k127_4451952_2 - - - - 0.0000000000000008728 84.0
YHH3_k127_4451952_3 ATP-dependent Clp protease adaptor protein ClpS - - - 0.000000002118 62.0
YHH3_k127_4458614_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016020,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0040007,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 1.894e-216 683.0
YHH3_k127_4458614_1 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000008766 175.0
YHH3_k127_4461658_0 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.0 1543.0
YHH3_k127_4461658_1 HsdM N-terminal domain K03427 - 2.1.1.72 1.753e-287 888.0
YHH3_k127_4461658_10 SEC-C Motif Domain Protein - - - 0.00000000000000000000000000000008909 137.0
YHH3_k127_4461658_11 Homeodomain-like domain - - - 0.00000000000003941 74.0
YHH3_k127_4461658_2 PFAM filamentation induced by cAMP protein Fic - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 458.0
YHH3_k127_4461658_3 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002912 380.0
YHH3_k127_4461658_4 Type I restriction modification DNA specificity domain K01154 - 3.1.21.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005369 366.0
YHH3_k127_4461658_5 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 360.0
YHH3_k127_4461658_6 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006788 256.0
YHH3_k127_4461658_7 - - - - 0.00000000000000000000000000000000000000000000000000000001144 206.0
YHH3_k127_4461658_8 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000000003701 157.0
YHH3_k127_4461658_9 SOS response associated peptidase (SRAP) - - - 0.000000000000000000000000000000000000003346 154.0
YHH3_k127_4486329_0 PFAM Endonuclease Exonuclease phosphatase K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000002515 250.0
YHH3_k127_4486329_1 Parallel beta-helix repeats - - - 0.000000000000000000000000000000000000000000000000002393 198.0
YHH3_k127_4486329_2 xylan catabolic process K03932 - - 0.00000000000000002596 89.0
YHH3_k127_4486329_3 cell adhesion K02650,K02682 - - 0.000000005646 64.0
YHH3_k127_4486329_4 YaeQ protein - - - 0.000001954 56.0
YHH3_k127_4501556_0 PFAM PfkB domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 366.0
YHH3_k127_4501556_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000001651 216.0
YHH3_k127_4501556_2 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000004433 207.0
YHH3_k127_4501556_3 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000007298 186.0
YHH3_k127_4501556_4 - - - - 0.00000000000000006875 82.0
YHH3_k127_4501556_5 - - - - 0.00000000000003711 76.0
YHH3_k127_4501556_6 TonB-dependent receptor K02014,K16089 - - 0.0000002636 56.0
YHH3_k127_4533699_0 twitching motility protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004228 427.0
YHH3_k127_4533699_1 Type II secretion system (T2SS), protein F K02455,K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 392.0
YHH3_k127_4533699_2 pilus assembly protein K02662 - - 0.00000000000000000000000000000000000000000000000000000000001043 222.0
YHH3_k127_4533699_3 type IV pilus secretin PilQ K02666 - - 0.00000000000000000000000000000000000000000000000000000007817 220.0
YHH3_k127_4533699_4 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000001709 186.0
YHH3_k127_4533699_5 PAS domain K01937,K02488 - 2.7.7.65,6.3.4.2 0.000000000000001421 90.0
YHH3_k127_4533699_6 Belongs to the N-Me-Phe pilin family K02650 - - 0.0000000000005787 73.0
YHH3_k127_4533699_7 Pilus assembly protein, PilO K02664 - - 0.000000000003812 74.0
YHH3_k127_4533699_8 O-Antigen ligase - - - 0.000005188 60.0
YHH3_k127_4533699_9 PFAM Fimbrial assembly family protein K02663 - - 0.0007487 49.0
YHH3_k127_4604235_0 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000484 196.0
YHH3_k127_4604235_1 competence protein - - - 0.0000000000000000000000000000008411 127.0
YHH3_k127_4617025_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 4.992e-216 687.0
YHH3_k127_4617025_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 2.448e-201 640.0
YHH3_k127_4617025_2 Trypsin-like peptidase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 318.0
YHH3_k127_4617025_3 ZIP Zinc transporter K16267 - - 0.00000000000000000000000000000000000000000000000001856 183.0
YHH3_k127_4617025_4 Forkhead associated domain - - - 0.0000007962 60.0
YHH3_k127_464709_0 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000003075 255.0
YHH3_k127_464709_1 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000001023 139.0
YHH3_k127_464709_2 CBS domain K03699 - - 0.00000000001147 67.0
YHH3_k127_4656835_0 NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00342,K05575 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 507.0
YHH3_k127_4656835_1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 472.0
YHH3_k127_4656835_10 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000004452 96.0
YHH3_k127_4656835_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 453.0
YHH3_k127_4656835_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337,K05572 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0044237,GO:0045333,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 315.0
YHH3_k127_4656835_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002727 312.0
YHH3_k127_4656835_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000005773 214.0
YHH3_k127_4656835_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K05580 - 1.6.5.3 0.000000000000000000000000000007258 125.0
YHH3_k127_4656835_7 electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon- concentration K05574 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.00000000000000000000000001171 113.0
YHH3_k127_4656835_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000002236 119.0
YHH3_k127_4656835_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000002459 104.0
YHH3_k127_4660476_0 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005146 382.0
YHH3_k127_4660476_1 DNA alkylation repair - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002265 261.0
YHH3_k127_4660476_2 COG0607 Rhodanese-related sulfurtransferase - - - 0.00000000000000000000009957 103.0
YHH3_k127_4660476_3 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008964,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044444,GO:0044464 4.1.1.31 0.000000000000000000007222 103.0
YHH3_k127_4660476_4 UV-endonuclease UvdE - - - 0.0000000000000003943 89.0
YHH3_k127_4673854_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 353.0
YHH3_k127_4675238_0 methyltransferase - - - 0.0000000000000000000000000000000008658 142.0
YHH3_k127_4675238_1 Exonuclease VII small subunit K03602 - 3.1.11.6 0.00000003585 59.0
YHH3_k127_4675238_2 Exonuclease VII, large subunit K03601 - 3.1.11.6 0.000002774 52.0
YHH3_k127_4675238_3 COG0457 FOG TPR repeat - - - 0.0009348 52.0
YHH3_k127_4712134_0 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 330.0
YHH3_k127_4712134_1 Elongator protein 3, MiaB family, Radical SAM K06937 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008085 313.0
YHH3_k127_4712134_10 FabA-like domain K02372 - 4.2.1.59 0.00003816 53.0
YHH3_k127_4712134_11 Nitroreductase family - - - 0.0001803 47.0
YHH3_k127_4712134_2 Elongator protein 3, MiaB family, Radical SAM K06937 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001222 289.0
YHH3_k127_4712134_3 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008162 286.0
YHH3_k127_4712134_4 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000003673 251.0
YHH3_k127_4712134_5 Enoyl-(Acyl carrier protein) reductase K00034,K03366 - 1.1.1.304,1.1.1.47,1.1.1.76 0.0000000000000000000000000000000000000000000000000000000004969 211.0
YHH3_k127_4712134_6 Protein of unknown function (DUF1571) - - - 0.000000000000000000000000000000000001016 147.0
YHH3_k127_4712134_7 COG0110 Acetyltransferase (isoleucine patch superfamily) - - - 0.000000000000000000009966 100.0
YHH3_k127_4712134_8 Phosphopantetheine attachment site - - - 0.00000000000000008496 88.0
YHH3_k127_4712134_9 Protein-S-isoprenylcysteine methyltransferase - - - 0.000000000000171 78.0
YHH3_k127_4740662_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.227e-205 655.0
YHH3_k127_4740662_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006192 372.0
YHH3_k127_4740662_2 Riboflavin kinase K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000001081 227.0
YHH3_k127_4740662_3 DHHA1 domain K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000005295 205.0
YHH3_k127_4740662_4 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000001818 196.0
YHH3_k127_4740662_5 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000000006194 101.0
YHH3_k127_4740662_6 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000006715 72.0
YHH3_k127_4740662_7 Peptidase MA superfamily - - - 0.00000001476 65.0
YHH3_k127_4806407_0 PFAM Protein kinase domain K08884 - 2.7.11.1 0.000002324 59.0
YHH3_k127_4830615_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 357.0
YHH3_k127_4830615_1 Protein of unknown function DUF58 - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005743 278.0
YHH3_k127_4834403_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 360.0
YHH3_k127_4834403_1 DNA polymerase III K02340 - 2.7.7.7 0.00007869 51.0
YHH3_k127_484368_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 3.264e-211 673.0
YHH3_k127_484368_1 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 306.0
YHH3_k127_484368_2 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001991 250.0
YHH3_k127_484368_3 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000193 211.0
YHH3_k127_484368_4 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000001837 191.0
YHH3_k127_484368_5 Flavin containing amine oxidoreductase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000004996 199.0
YHH3_k127_484368_6 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000006078 169.0
YHH3_k127_484368_7 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.00000000000000000000000000000000000000001246 158.0
YHH3_k127_484368_8 Belongs to the peptidase S8 family - - - 0.0001904 53.0
YHH3_k127_4850896_0 MFS/sugar transport protein K06902 - - 0.00000000000000000000000000000000000000000657 164.0
YHH3_k127_4850896_1 Peptidase family M23 K08259 - 3.4.24.75 0.0000000000000000000000000000000000009018 146.0
YHH3_k127_4851715_0 Addiction module toxin, RelE StbE family - - - 0.000000000000000000000002495 105.0
YHH3_k127_4851715_1 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000003115 64.0
YHH3_k127_4851715_2 - - - - 0.00000000004793 67.0
YHH3_k127_4855156_0 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 292.0
YHH3_k127_4855156_1 Two component transcriptional regulator, winged helix family K07657 - - 0.000000000000000000000000000000000000000000000209 177.0
YHH3_k127_4855156_2 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000004137 184.0
YHH3_k127_4855156_3 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.000000000000000000000000149 110.0
YHH3_k127_4855156_4 alginic acid biosynthetic process K20276 - - 0.00000000001362 79.0
YHH3_k127_4855156_5 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000001136 61.0
YHH3_k127_4882947_0 Domain of unknown function (DUF4143) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000933 332.0
YHH3_k127_4882947_1 Diacylglycerol kinase catalytic domain (presumed) - - - 0.000000000000000000000000000000000000000000000003161 181.0
YHH3_k127_4882947_2 Transcriptional regulator - - - 0.00000000000000000003285 96.0
YHH3_k127_4882947_3 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.00000000000126 81.0
YHH3_k127_4882947_4 - - - - 0.0000000008608 67.0
YHH3_k127_4904905_0 Bacterial Ig-like domain (group 3) - - - 0.00000000000000000000000000000000001034 157.0
YHH3_k127_4904905_1 Ig-like domain from next to BRCA1 gene - - - 0.000000000000000000000000000007273 138.0
YHH3_k127_4904905_2 Alpha-L-fucosidase - - - 0.00000000000000000000004377 116.0
YHH3_k127_4904905_3 Ig-like domain from next to BRCA1 gene - - - 0.00000000000000000000008277 114.0
YHH3_k127_4904905_4 Laminin G domain - - - 0.0000000000000000006437 102.0
YHH3_k127_4916686_0 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 441.0
YHH3_k127_4916686_1 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 402.0
YHH3_k127_4916686_10 Haloacid dehalogenase-like hydrolase K07025,K20866 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008877,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050308 3.1.3.10 0.00000000000000002086 91.0
YHH3_k127_4916686_11 BetI-type transcriptional repressor, C-terminal - - - 0.000000000007691 73.0
YHH3_k127_4916686_12 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000225 57.0
YHH3_k127_4916686_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006803 309.0
YHH3_k127_4916686_3 cation diffusion facilitator family transporter K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008588 273.0
YHH3_k127_4916686_4 Metallo-beta-lactamase superfamily K01069 GO:0003674,GO:0003824,GO:0004416,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006090,GO:0006518,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016787,GO:0016788,GO:0016790,GO:0019184,GO:0019752,GO:0031974,GO:0032787,GO:0034641,GO:0042398,GO:0043043,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0051186,GO:0051188,GO:0070013,GO:0071704,GO:1901564,GO:1901566,GO:1901576 3.1.2.6 0.00000000000000000000000000000000000000000000000000000001069 205.0
YHH3_k127_4916686_5 4-hydroxybenzoate polyprenyltransferase K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000001442 199.0
YHH3_k127_4916686_6 peptidase activity - - - 0.000000000000000000000000000000000000000000000005002 194.0
YHH3_k127_4916686_7 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000007722 177.0
YHH3_k127_4916686_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000003251 153.0
YHH3_k127_4916686_9 PFAM outer membrane efflux protein - - - 0.0000000000000000000000000000000001377 151.0
YHH3_k127_4946476_0 GDP-mannose 4,6 dehydratase K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003958 436.0
YHH3_k127_4946476_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 367.0
YHH3_k127_4946476_2 LytB protein K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 349.0
YHH3_k127_4946476_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001018 253.0
YHH3_k127_4946476_4 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000119 194.0
YHH3_k127_4946476_5 - - - - 0.0000000000000000000000008121 113.0
YHH3_k127_4973206_0 Carbon-nitrogen hydrolase K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 328.0
YHH3_k127_4973206_1 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.000000000000000000000000000000000000000000000000005482 188.0
YHH3_k127_4973206_2 Nitrous oxide-stimulated promoter - - - 0.00000000000000000000000007122 124.0
YHH3_k127_4973206_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0000000002899 61.0
YHH3_k127_5012142_0 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 327.0
YHH3_k127_5012142_1 ATPases associated with a variety of cellular activities K02032 - - 0.00000000000000000000000000006342 118.0
YHH3_k127_5014409_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 439.0
YHH3_k127_5014409_1 stress-induced mitochondrial fusion - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 396.0
YHH3_k127_5014409_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003425 370.0
YHH3_k127_5014409_3 SPFH domain / Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 359.0
YHH3_k127_5014409_4 Nucleotidyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002385 248.0
YHH3_k127_5014409_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000003175 157.0
YHH3_k127_5089104_0 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 289.0
YHH3_k127_5089104_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001419 276.0
YHH3_k127_5100281_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 337.0
YHH3_k127_5100281_1 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000006107 113.0
YHH3_k127_5100281_2 PFAM Mur ligase family, glutamate ligase domain K11754 - 6.3.2.12,6.3.2.17 0.000000005624 61.0
YHH3_k127_5249004_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006437,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 401.0
YHH3_k127_5249004_1 PFAM Ribonuclease BN-like family K07058 - - 0.000000000000000000000000000000000000000000000000009816 194.0
YHH3_k127_5249004_2 - - - - 0.00000000000000000000000000000000000000000000000006325 198.0
YHH3_k127_5249004_3 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.0000000000000000000000000133 113.0
YHH3_k127_5280533_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688,K18786 - 2.4.1.321 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 437.0
YHH3_k127_5280533_1 Transposase DDE domain - - - 0.000000009679 57.0
YHH3_k127_5338601_0 Ami_3 K01448 - 3.5.1.28 0.0000006807 63.0
YHH3_k127_5350121_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 484.0
YHH3_k127_5350121_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005666 408.0
YHH3_k127_5350121_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 329.0
YHH3_k127_5350121_3 recombinase XerD K04763 GO:0000150,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008907,GO:0009009,GO:0009037,GO:0009314,GO:0009628,GO:0009987,GO:0015074,GO:0032991,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0071139,GO:0071704,GO:0090304,GO:0140097,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000000000002771 260.0
YHH3_k127_5350121_4 Thiolase, C-terminal domain K00626,K00632 - 2.3.1.16,2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000101 253.0
YHH3_k127_5350121_5 COGs COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM invasin domains) K08309 - - 0.00000000000000000000000000000174 127.0
YHH3_k127_5350121_6 Belongs to the UPF0434 family K09791 - - 0.000000000000001799 82.0
YHH3_k127_5395005_0 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000001932 212.0
YHH3_k127_5395005_1 PFAM Cyclic nucleotide-binding K10914 - - 0.00000000000000000000000000000000000000000003624 170.0
YHH3_k127_5395005_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0006950,GO:0006970,GO:0008150,GO:0009266,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000001039 125.0
YHH3_k127_5395005_3 PFAM Radical SAM K01012 - 2.8.1.6 0.0000000002181 63.0
YHH3_k127_5395005_4 Domain of unknown function (DUF4179) - - - 0.0005655 50.0
YHH3_k127_5396281_0 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002578 260.0
YHH3_k127_5396281_1 Belongs to the carbamoyltransferase HypF family K04656 - - 0.000000000000000000000000000000000000000000001053 172.0
YHH3_k127_5402669_0 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 541.0
YHH3_k127_5402669_1 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000009692 168.0
YHH3_k127_5402669_2 iron-sulfur cluster assembly - - - 0.0000000000000000000000000001605 119.0
YHH3_k127_5415604_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000674 498.0
YHH3_k127_5415604_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 449.0
YHH3_k127_5415604_2 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000004919 266.0
YHH3_k127_5415604_3 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000005379 148.0
YHH3_k127_5425234_0 PAS domain - - - 0.00000000000000000000000000000000000000000004864 172.0
YHH3_k127_5428863_0 PFAM NAD-dependent epimerase dehydratase K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 392.0
YHH3_k127_5461046_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 2.069e-304 947.0
YHH3_k127_5461046_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016020,GO:0016043,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000002165 136.0
YHH3_k127_5461046_2 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000005848 82.0
YHH3_k127_5482196_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 6.13e-199 663.0
YHH3_k127_5482196_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 503.0
YHH3_k127_5482196_2 outer membrane efflux protein - - - 0.000001607 55.0
YHH3_k127_5500661_0 Belongs to the bacterial solute-binding protein 9 family - - - 0.000004983 60.0
YHH3_k127_5504487_0 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 485.0
YHH3_k127_5504487_1 TIGRFAM acetylornithine and succinylornithine aminotransferase K00819,K00821 - 2.6.1.11,2.6.1.13,2.6.1.17 0.00000000000000000004174 92.0
YHH3_k127_5504487_2 COG1045 Serine acetyltransferase K00640 - 2.3.1.30 0.00000007233 58.0
YHH3_k127_5506458_0 Belongs to the glycosyl hydrolase 57 family - - - 1.995e-229 736.0
YHH3_k127_5506458_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008556 516.0
YHH3_k127_5506458_10 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01485,K11991 GO:0002097,GO:0002100,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 3.5.4.1,3.5.4.33 0.000001888 50.0
YHH3_k127_5506458_2 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007069 447.0
YHH3_k127_5506458_3 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008969 423.0
YHH3_k127_5506458_4 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000005883 263.0
YHH3_k127_5506458_5 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000007842 224.0
YHH3_k127_5506458_6 P-type ATPase K17686 - 3.6.3.54 0.0000000000000000000000000000000000000000000000000000000005583 211.0
YHH3_k127_5506458_7 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000001154 209.0
YHH3_k127_5506458_8 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000001 74.0
YHH3_k127_5506458_9 - K01992,K19341 - - 0.00000000003132 74.0
YHH3_k127_5508699_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000006287 132.0
YHH3_k127_5508699_1 Ribosomal L28 family K02902 - - 0.000000000000000008861 84.0
YHH3_k127_5508699_2 long-chain fatty acid transport protein - - - 0.00004163 55.0
YHH3_k127_5508699_3 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0008483 42.0
YHH3_k127_5544301_0 Transposase IS200 like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004927 278.0
YHH3_k127_5544301_1 NmrA-like family - - - 0.00000000005807 70.0
YHH3_k127_5566337_0 amino acid - - - 1.069e-207 668.0
YHH3_k127_5566337_1 TonB C terminal K03832 - - 0.0000001514 56.0
YHH3_k127_5568886_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 2.181e-205 667.0
YHH3_k127_5568886_1 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005051 271.0
YHH3_k127_5568886_2 IMP dehydrogenase / GMP reductase domain K00088 - 1.1.1.205 0.00000000000000000000000000000000000000000000000000000000000000001359 232.0
YHH3_k127_5568886_3 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000002138 168.0
YHH3_k127_5568886_4 ggdef domain - - - 0.000000000000000000000000000000000001048 155.0
YHH3_k127_5573492_0 TIGRFAM serine O-acetyltransferase K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000001422 222.0
YHH3_k127_5573492_1 - - - - 0.000000000000000003197 93.0
YHH3_k127_5573492_2 - - - - 0.0000002264 61.0
YHH3_k127_5584850_0 Outer membrane lipoprotein - - - 0.0000000000000000000000000000000000000008022 171.0
YHH3_k127_5584850_1 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000001235 94.0
YHH3_k127_5584850_2 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.000000000002124 77.0
YHH3_k127_5584850_3 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.00000002173 61.0
YHH3_k127_5625053_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000004397 258.0
YHH3_k127_5625053_1 Helix-hairpin-helix motif K02337,K14162 - 2.7.7.7 0.00000000000000000000000000001132 126.0
YHH3_k127_5625929_0 Resolvase K06400 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003039 256.0
YHH3_k127_5626225_0 Phospholipase D. Active site motifs. K06132 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007912 350.0
YHH3_k127_5626225_1 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 350.0
YHH3_k127_5626225_2 Surface antigen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003239 279.0
YHH3_k127_5626225_3 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000007861 199.0
YHH3_k127_5626225_4 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain - - - 0.00000000005309 71.0
YHH3_k127_5655974_0 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 1.565e-311 970.0
YHH3_k127_5655974_1 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003298 290.0
YHH3_k127_5655974_2 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.000000000000000000000000000000000000000003272 170.0
YHH3_k127_5679729_0 twitching motility protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007413 404.0
YHH3_k127_5679729_1 PFAM Type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 361.0
YHH3_k127_5679729_2 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.000000000000000000000000002575 122.0
YHH3_k127_5740875_0 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02004,K05685 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009951 293.0
YHH3_k127_5760367_0 Actin K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 442.0
YHH3_k127_5760367_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 304.0
YHH3_k127_5760367_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000007364 180.0
YHH3_k127_5760367_3 Ribosomal protein L17 K02879 - - 0.00000000000000000000006606 107.0
YHH3_k127_5769195_0 PFAM Oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000002541 223.0
YHH3_k127_5769195_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000002518 224.0
YHH3_k127_5770393_0 Sulfatase K01130 - 3.1.6.1 0.0 1142.0
YHH3_k127_5770393_1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K04085 - - 1.285e-258 809.0
YHH3_k127_5770393_10 MarC family integral membrane protein K05595 - - 0.0000000000000000000000000000000002217 139.0
YHH3_k127_5770393_11 nucleotidyltransferase activity - - - 0.000000000000000000000000000000003465 132.0
YHH3_k127_5770393_12 Endoglucanase K01218 - 3.2.1.78 0.0000000000000000000001197 116.0
YHH3_k127_5770393_13 Nucleotidyltransferase domain - - - 0.0000000000000002211 82.0
YHH3_k127_5770393_14 Fibronectin type III - - - 0.00000000000006164 87.0
YHH3_k127_5770393_2 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 1.14e-233 733.0
YHH3_k127_5770393_3 radical SAM domain protein K06871 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 529.0
YHH3_k127_5770393_4 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007335 464.0
YHH3_k127_5770393_5 TspO MBR family protein K05770 - - 0.000000000000000000000000000000000000000000000000000000000000000000644 232.0
YHH3_k127_5770393_6 NapC/NirT cytochrome c family, N-terminal region K15876 - - 0.0000000000000000000000000000000000000000000000000000000002002 207.0
YHH3_k127_5770393_7 - - - - 0.000000000000000000000000000000000000000000000000003353 197.0
YHH3_k127_5770393_8 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000007285 190.0
YHH3_k127_5770393_9 Putative MetA-pathway of phenol degradation - - - 0.000000000000000000000000000000000000006927 157.0
YHH3_k127_5790607_0 Integral membrane sensor signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000001347 233.0
YHH3_k127_5790607_1 PFAM response regulator receiver K02483,K07658,K07668 - - 0.00000000000000000000000000000000000000000000000000000001161 205.0
YHH3_k127_5885759_0 - - - - 0.000000000000000000000004243 118.0
YHH3_k127_5934882_0 Sulfatase - - - 0.00000006369 65.0
YHH3_k127_5958880_0 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007404 567.0
YHH3_k127_5958880_1 Sigma-70 region 2 K03088 - - 0.00000000000000000000000005357 115.0
YHH3_k127_5958880_2 Protein of unknown function (DUF3106) - - - 0.00006322 51.0
YHH3_k127_6041792_0 Parallel beta-helix repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009642 563.0
YHH3_k127_6041792_1 - - - - 0.000000000557 70.0
YHH3_k127_6069539_0 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit K01844 - 5.4.3.3 0.000000000000000000000000000000000000000000000000001139 190.0
YHH3_k127_6069539_1 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000001255 172.0
YHH3_k127_6069539_2 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000007406 100.0
YHH3_k127_6069539_3 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.00000000000000006481 90.0
YHH3_k127_6069539_4 RNA polymerase sigma54 factor K03092 - - 0.0001067 54.0
YHH3_k127_6069539_5 Maf-like protein K06287 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0022402,GO:0022607,GO:0030428,GO:0032506,GO:0044085,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0090529,GO:1902410,GO:1903047 - 0.0005555 44.0
YHH3_k127_6102256_0 Putative ATP-binding cassette K01992 - - 0.000000000000000000000000000000000000000000000000000000001323 212.0
YHH3_k127_6102256_1 Hsp20/alpha crystallin family K13993 - - 0.000000000000000000000000000000000000001626 152.0
YHH3_k127_6102256_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000001604 70.0
YHH3_k127_6102256_3 helix_turn_helix, mercury resistance K03713,K15580 GO:0003674,GO:0005488,GO:0005515,GO:0006082,GO:0006355,GO:0006520,GO:0006541,GO:0006542,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016053,GO:0019219,GO:0019222,GO:0019752,GO:0031323,GO:0031326,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1903506,GO:2000112,GO:2001141 - 0.00000000002079 68.0
YHH3_k127_6117856_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000448 264.0
YHH3_k127_6117856_1 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000001785 229.0
YHH3_k127_6131355_0 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000002384 199.0
YHH3_k127_6131355_1 PFAM Monogalactosyldiacylglycerol synthase K03429 - 2.4.1.315 0.0000000000000000000000000000000004228 142.0
YHH3_k127_6131355_2 helix_turn_helix, mercury resistance - - - 0.0000000000000000305 86.0
YHH3_k127_6131355_3 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000003197 72.0
YHH3_k127_6174743_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 3.074e-207 667.0
YHH3_k127_6232140_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 352.0
YHH3_k127_6232140_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 326.0
YHH3_k127_6232140_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004847 285.0
YHH3_k127_6251165_0 PFAM aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 478.0
YHH3_k127_6251165_1 Belongs to the ALAD family K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005634 402.0
YHH3_k127_6251165_2 Zn-dependent hydrolases of the - - - 0.0000000000000000000000000000000000000002576 160.0
YHH3_k127_6251165_3 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000001796 139.0
YHH3_k127_625845_0 Glycogen debranching enzyme - - - 0.0 1302.0
YHH3_k127_625845_1 alpha amylase, catalytic region - - - 1.462e-216 682.0
YHH3_k127_625845_10 - - - - 0.00000000000000009703 86.0
YHH3_k127_625845_2 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006115 464.0
YHH3_k127_625845_3 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000000000000000000000000000000000000000000000000000000006612 220.0
YHH3_k127_625845_4 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000003831 175.0
YHH3_k127_625845_5 PFAM multiple antibiotic resistance (MarC)-related protein K05595 - - 0.000000000000000000000000000000000001486 144.0
YHH3_k127_625845_7 Domain of unknown function (DUF202) K00389 - - 0.00000000000000000000000000000008121 129.0
YHH3_k127_625845_8 hydroperoxide reductase activity - - - 0.00000000000000000000000000057 119.0
YHH3_k127_6332032_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955 - 2.7.1.25,2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 531.0
YHH3_k127_6332032_1 PFAM Phosphoadenosine phosphosulfate reductase K00390,K00957 - 1.8.4.10,1.8.4.8,2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 518.0
YHH3_k127_6332032_2 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 344.0
YHH3_k127_6332032_3 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 288.0
YHH3_k127_6332032_4 Predicted membrane protein (DUF2061) - - - 0.000000000000000000000122 100.0
YHH3_k127_6332032_5 Transcriptional regulator - - - 0.00000000000002057 80.0
YHH3_k127_6332032_6 Tetratricopeptide repeat - - - 0.0002207 45.0
YHH3_k127_6340364_0 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002886 287.0
YHH3_k127_6340364_1 COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type) K02806 - - 0.0000000000000000000000000002649 115.0
YHH3_k127_6340364_2 Displays ATPase and GTPase activities K06958 - - 0.000000000000001824 88.0
YHH3_k127_6376114_0 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 364.0
YHH3_k127_6376114_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000001925 216.0
YHH3_k127_6376114_2 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000006699 97.0
YHH3_k127_6376114_3 Probable zinc-ribbon domain - - - 0.000000001858 61.0
YHH3_k127_6384011_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000001658 249.0
YHH3_k127_6389451_0 FeS assembly protein SufB K07033,K09014 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0034641,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 587.0
YHH3_k127_6389451_1 ABC transporter K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 338.0
YHH3_k127_6389451_2 cellulase activity K01179,K01183,K13381,K20276 - 3.2.1.14,3.2.1.17,3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000006111 270.0
YHH3_k127_6389451_3 Transcriptional regulator - - - 0.0000000000000000000000000007829 118.0
YHH3_k127_640166_0 restriction endonuclease K07448 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 364.0
YHH3_k127_640166_1 Bacterial Ig-like domain (group 3) - - - 0.000000003391 72.0
YHH3_k127_6432190_0 protein trimerization - - - 0.0000000000000000000003827 113.0
YHH3_k127_6432190_1 Glycogen recognition site of AMP-activated protein kinase - - - 0.0000001696 61.0
YHH3_k127_6432663_0 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.00000000000000000000000000000000000000000000000000000000000000000000000009393 254.0
YHH3_k127_6432663_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0030312,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0071704,GO:0071944,GO:0140096,GO:1901564 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000003715 214.0
YHH3_k127_6432663_2 Tfp pilus assembly protein FimV - - - 0.000000000000000000000000000000000000000000000003918 188.0
YHH3_k127_6443851_0 transport protein K07085 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 523.0
YHH3_k127_6443851_1 ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000008002 93.0
YHH3_k127_6443851_2 Domain of unknown function (DUF4149) - - - 0.0000000000000005249 86.0
YHH3_k127_6447442_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000323 343.0
YHH3_k127_6447442_1 Protein of unknown function (DUF1343) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 338.0
YHH3_k127_6447442_2 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.00000000000000000000000000000000000000000000000000000000000000004564 233.0
YHH3_k127_6447442_3 Integral membrane sensor hybrid histidine kinase - - - 0.000000000006294 72.0
YHH3_k127_6499705_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 9.074e-195 614.0
YHH3_k127_6499705_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000003295 251.0
YHH3_k127_6499705_2 - - - - 0.00000000000000000001163 105.0
YHH3_k127_6506587_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 7.338e-255 802.0
YHH3_k127_6506587_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 532.0
YHH3_k127_6506587_10 Protein of unknown function (DUF1501) - - - 0.000000000000000000000000000000000000004011 151.0
YHH3_k127_6506587_11 Domain of unknown function DUF302 - - - 0.00000000000000000000001765 105.0
YHH3_k127_6506587_12 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000003811 109.0
YHH3_k127_6506587_13 Bacterial Ig-like domain (group 1) - - - 0.0000000000006322 83.0
YHH3_k127_6506587_14 O-antigen polymerase K18814 - - 0.00000000005979 76.0
YHH3_k127_6506587_15 O-antigen polymerase K18814 - - 0.000000000268 74.0
YHH3_k127_6506587_2 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004349 518.0
YHH3_k127_6506587_3 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 385.0
YHH3_k127_6506587_4 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K01810,K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005278 357.0
YHH3_k127_6506587_5 PFAM type II secretion system protein E K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 335.0
YHH3_k127_6506587_6 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000587 295.0
YHH3_k127_6506587_7 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.000000000000000000000000000000000000000000000000000000000001328 216.0
YHH3_k127_6506587_8 Hpt domain - - - 0.00000000000000000000000000000000000000000000001162 193.0
YHH3_k127_6506587_9 ribose 5-phosphate isomerase B K01808 - 5.3.1.6 0.00000000000000000000000000000000000000008597 156.0
YHH3_k127_6509514_0 PFAM ABC transporter related K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000002156 202.0
YHH3_k127_6517106_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004676 282.0
YHH3_k127_6517106_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000004592 267.0
YHH3_k127_6517106_2 Glutamine phosphoribosylpyrophosphate amidotransferase K00764 GO:0003674,GO:0003824,GO:0004044,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006144,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009113,GO:0009117,GO:0009165,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009657,GO:0009658,GO:0009987,GO:0016043,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019637,GO:0030312,GO:0034641,GO:0034654,GO:0042440,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046112,GO:0046148,GO:0046483,GO:0055086,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.14 0.00004165 46.0
YHH3_k127_6555957_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 456.0
YHH3_k127_6555957_1 Transglycosylase K05366,K21464 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000304 312.0
YHH3_k127_6555957_2 Activator of Hsp90 ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000001089 222.0
YHH3_k127_6555957_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.000000000000000000000000000000000000000000000000000000000000168 216.0
YHH3_k127_6555957_4 Uncharacterized ACR, COG1993 K09137 - - 0.000000000000000000000000000000000000000003121 158.0
YHH3_k127_6555957_5 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000001516 111.0
YHH3_k127_6555957_6 RibD C-terminal domain - - - 0.00000000000002762 75.0
YHH3_k127_6590806_0 Glycogen debranching enzyme - - - 2.415e-306 944.0
YHH3_k127_6590806_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000002952 131.0
YHH3_k127_6591352_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 3.318e-227 715.0
YHH3_k127_6591352_1 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004711 440.0
YHH3_k127_6591352_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000000000000002076 180.0
YHH3_k127_6591352_3 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.0000000000000000000000000000000000000002264 162.0
YHH3_k127_6591352_4 Protein tyrosine kinase - - - 0.00001157 60.0
YHH3_k127_6591352_5 Protein tyrosine kinase - - - 0.00001157 60.0
YHH3_k127_6591676_0 HsdM N-terminal domain K03427 - 2.1.1.72 0.0 1159.0
YHH3_k127_6591676_1 type I restriction modification DNA specificity domain K01154 - 3.1.21.3 0.0000000000000000000000000000000000000000001392 165.0
YHH3_k127_6591676_2 - - - - 0.000000000000000000000000000000000000000004176 162.0
YHH3_k127_6591676_3 TIGRFAM Competence protein ComEA, helix-hairpin-helix - - - 0.000006504 59.0
YHH3_k127_6634776_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007319 340.0
YHH3_k127_6634776_1 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.000000000000000000000000000000000000000000000000000001184 201.0
YHH3_k127_6634776_2 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000003598 136.0
YHH3_k127_6634776_3 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000000000000000001641 96.0
YHH3_k127_6634776_4 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000008171 62.0
YHH3_k127_6651770_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1141.0
YHH3_k127_6651770_1 ABC-type multidrug transport system, ATPase component K13926 - - 7.1e-237 745.0
YHH3_k127_6651770_2 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 554.0
YHH3_k127_6651770_3 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005923 284.0
YHH3_k127_6651770_4 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006078 286.0
YHH3_k127_6651770_5 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000001446 172.0
YHH3_k127_6651770_6 COG2829 Outer membrane phospholipase A K01058 - 3.1.1.32,3.1.1.4 0.0000000000000008801 87.0
YHH3_k127_6658072_0 Parallel beta-helix repeats - - - 0.0000000000000000000000000000000000003441 158.0
YHH3_k127_6669331_0 COG0659 Sulfate permease and related transporters (MFS superfamily) K01673,K03321 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 541.0
YHH3_k127_6669331_1 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 516.0
YHH3_k127_6669331_10 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000001607 154.0
YHH3_k127_6669331_11 heat shock protein binding - - - 0.000000000000000000000000000001964 134.0
YHH3_k127_6669331_12 regulation of RNA biosynthetic process K03567 - - 0.0000000000000000000000000006976 121.0
YHH3_k127_6669331_13 - - - - 0.0000000000002516 74.0
YHH3_k127_6669331_14 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000003287 64.0
YHH3_k127_6669331_2 Cytochrome c bacterial - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 467.0
YHH3_k127_6669331_3 Protein of unknown function (DUF3373) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 403.0
YHH3_k127_6669331_4 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005615 333.0
YHH3_k127_6669331_5 Phosphate-selective porin O and P K07221 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004233 316.0
YHH3_k127_6669331_6 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000002549 203.0
YHH3_k127_6669331_7 PFAM cytochrome B561 - - - 0.0000000000000000000000000000000000000000000000000149 191.0
YHH3_k127_6669331_8 Polypeptide deformylase K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000001692 169.0
YHH3_k127_6678354_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K07250 - 2.6.1.19,2.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 466.0
YHH3_k127_6678354_1 NeuB family K01654 - 2.5.1.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004224 409.0
YHH3_k127_6678354_2 Thermolysin metallopeptidase, alpha-helical domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006928 348.0
YHH3_k127_6678354_3 PFAM acylneuraminate cytidylyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002279 245.0
YHH3_k127_6678354_4 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000005572 213.0
YHH3_k127_6678354_5 Xylose isomerase-like TIM barrel K03079 - 5.1.3.22 0.000000000000000000000000000000000000000000000000000002805 204.0
YHH3_k127_6678354_6 Methyltransferase domain - - - 0.000000000000000000000000000000000000001885 161.0
YHH3_k127_6678354_7 Cytidylyltransferase K03270 - 3.1.3.45 0.0000000000000000008601 92.0
YHH3_k127_6714792_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 447.0
YHH3_k127_6767581_0 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769,K03770 - 5.2.1.8 0.000000000000000000000000000000007251 139.0
YHH3_k127_6767581_1 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.0000000000000000000000000000004121 137.0
YHH3_k127_6815719_0 Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000061 268.0
YHH3_k127_6815719_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.00000000000000000000000000000000000000000000000000000007154 205.0
YHH3_k127_6815900_0 Curli production assembly/transport component CsgG - - - 0.000002368 59.0
YHH3_k127_6815900_1 COG0457 FOG TPR repeat - - - 0.000009512 55.0
YHH3_k127_6941713_0 COG3209 Rhs family protein - - - 0.00007726 57.0
YHH3_k127_6944208_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599,K01719,K13542 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.107,4.1.1.37,4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 389.0
YHH3_k127_6944208_1 E1-E2 ATPase K17686 - 3.6.3.54 0.00000000000000000000000000000000001206 137.0
YHH3_k127_6944208_2 Beta-L-arabinofuranosidase, GH127 - - - 0.0000000000000000000000000000000006065 143.0
YHH3_k127_6944208_3 CHASE3 domain - - - 0.00000000000000000001395 95.0
YHH3_k127_6944208_4 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016020,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0040007,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0046148,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051537,GO:0051540,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.0000000000003496 72.0
YHH3_k127_6944208_5 Pectate lyase - - - 0.00002366 55.0
YHH3_k127_6992861_0 RecQ zinc-binding K03654 - 3.6.4.12 1.197e-194 620.0
YHH3_k127_6992861_1 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 370.0
YHH3_k127_6992861_2 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000003982 181.0
YHH3_k127_6992861_3 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000002828 126.0
YHH3_k127_6992861_4 Protein of unknown function (DUF2492) - - - 0.00000000000000000000001789 101.0
YHH3_k127_6992861_5 Biopolymer transport protein ExbD TolR K03559 - - 0.00000000000000000007974 94.0
YHH3_k127_7045275_0 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007912 306.0
YHH3_k127_7045275_1 Helix-turn-helix XRE-family like proteins - - - 0.00000000000436 72.0
YHH3_k127_7045275_2 Protein of unknown function (DUF819) - - - 0.0000004489 52.0
YHH3_k127_7047567_0 PFAM aminotransferase class V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 310.0
YHH3_k127_7047567_1 unfolded protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000007816 234.0
YHH3_k127_7047567_2 deoxyhypusine monooxygenase activity - - - 0.00002915 57.0
YHH3_k127_7128045_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005279 581.0
YHH3_k127_7128045_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 475.0
YHH3_k127_7128045_2 Pfam:HipA_N K07154 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000152 252.0
YHH3_k127_7128045_3 FeS assembly protein SufD K07033,K09015 GO:0006790,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0040007,GO:0043207,GO:0044085,GO:0044237,GO:0044403,GO:0044419,GO:0050896,GO:0051186,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0071840,GO:0075136 - 0.000000000000000000000000000000000000000000000000000000000003841 217.0
YHH3_k127_7128045_4 NifU-like N terminal domain K04488 - - 0.00000000000000000000000000000000000000004053 159.0
YHH3_k127_7128045_5 response regulator, receiver K07658 - - 0.0000000000000000000000000014 116.0
YHH3_k127_7128045_6 of nitrite reductase and ring-hydroxylating K05710 - - 0.000000000000000000000000001839 115.0
YHH3_k127_7128045_7 HipA N-terminal domain K07154 - 2.7.11.1 0.000000000000000000000000007513 113.0
YHH3_k127_7128045_8 FeS assembly SUF system protein - - - 0.0000000000000000000000001871 109.0
YHH3_k127_7128045_9 sequence-specific DNA binding - - - 0.00000000000000000008151 90.0
YHH3_k127_7131218_0 Biotin and Thiamin Synthesis associated K03150 - 4.1.99.19 1.772e-210 664.0
YHH3_k127_7131218_1 50S ribosome-binding GTPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009188 516.0
YHH3_k127_7131218_2 PFAM fumarate lyase K01744 - 4.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 494.0
YHH3_k127_7131218_3 Iron-only hydrogenase maturation rSAM protein HydE K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001969 281.0
YHH3_k127_7150630_0 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005435 355.0
YHH3_k127_7150630_1 ATP-dependent helicase C-terminal K03579 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005689 291.0
YHH3_k127_715916_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006782 574.0
YHH3_k127_715916_1 PFAM Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 405.0
YHH3_k127_715916_2 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501 344.0
YHH3_k127_715916_3 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004284 269.0
YHH3_k127_715916_4 Insulinase family (Peptidase family M16) - - - 0.00000000000000000000000000000001034 133.0
YHH3_k127_7163772_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000001558 214.0
YHH3_k127_7163772_1 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000001442 179.0
YHH3_k127_7163772_2 Universal stress protein family - - - 0.0002762 46.0
YHH3_k127_7187886_0 Domain of unknown function (DUF4143) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000336 290.0
YHH3_k127_7187886_1 PFAM short-chain dehydrogenase reductase SDR K03793 - 1.5.1.33 0.000006245 49.0
YHH3_k127_7244025_0 7TM receptor with intracellular HD hydrolase K07037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 316.0
YHH3_k127_7244025_1 PFAM PhoH family protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004991 278.0
YHH3_k127_7245764_0 4-alpha-glucanotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 391.0
YHH3_k127_7245764_1 pfam abc K01990,K09695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002658 267.0
YHH3_k127_7245764_2 ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000779 228.0
YHH3_k127_7245764_3 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.000000000000000000000000000000000000000000008324 169.0
YHH3_k127_7274589_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.427e-209 672.0
YHH3_k127_7274589_1 tRNA synthetase class II core domain (G, H, P, S and T) K01892 - 6.1.1.21 0.00001083 51.0
YHH3_k127_7373906_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0030428,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 363.0
YHH3_k127_7373906_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002344 268.0
YHH3_k127_7377848_0 Glycosyl transferase family group 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 512.0
YHH3_k127_7377848_1 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 490.0
YHH3_k127_7377848_10 metallopeptidase activity - - - 0.00000000000000002818 93.0
YHH3_k127_7377848_11 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000006668 93.0
YHH3_k127_7377848_12 long-chain fatty acid transport protein - - - 0.000000000001865 78.0
YHH3_k127_7377848_13 long-chain fatty acid transporting porin activity - - - 0.000000000002299 78.0
YHH3_k127_7377848_14 penicillin-binding protein - - - 0.0000000001409 72.0
YHH3_k127_7377848_2 Domain of unknown function (DUF4172) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008783 474.0
YHH3_k127_7377848_3 Protein conserved in bacteria K11891,K11902,K11910 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 362.0
YHH3_k127_7377848_4 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000003335 228.0
YHH3_k127_7377848_5 Surface antigen K07277 - - 0.0000000000000000000000000000000000000000000000000003122 204.0
YHH3_k127_7377848_6 4,5-dihydroxyphthalate decarboxylase K04102 - 4.1.1.55 0.0000000000000000000000000000000000000000000000001061 190.0
YHH3_k127_7377848_7 - - - - 0.0000000000000000000000000000000000000001679 164.0
YHH3_k127_7377848_8 PFAM metal-dependent phosphohydrolase, HD sub domain K02030,K02103,K02529 - - 0.000000000000000000000000000000000000002838 158.0
YHH3_k127_7377848_9 Protein of unknown function (DUF2490) - - - 0.00000000000000000002069 100.0
YHH3_k127_7392688_0 glutamate synthase K00284 - 1.4.7.1 0.0 2175.0
YHH3_k127_7392688_1 Zinc-binding dehydrogenase K13979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007519 431.0
YHH3_k127_7392688_2 TIGRFAM glutamate synthases, NADH NADPH, small subunit K00266 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001254 276.0
YHH3_k127_7392688_3 Pyruvate ferredoxin/flavodoxin oxidoreductase K00179,K04090 - 1.2.7.8 0.000000000000000000000000000000000000000000008065 172.0
YHH3_k127_7392688_4 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.000000000000000000000000000000000000000001635 165.0
YHH3_k127_7392688_5 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000001122 150.0
YHH3_k127_7392688_6 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000005176 132.0
YHH3_k127_7392688_7 Diguanylate cyclase - - - 0.0000000000000000000000001506 120.0
YHH3_k127_7392688_8 diguanylate cyclase - - - 0.0000000000000000000000064 115.0
YHH3_k127_7392688_9 DNA-binding transcriptional activator of the SARP family - - - 0.00001247 58.0
YHH3_k127_7473690_0 Domain of unknown function (DUF4143) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003325 454.0
YHH3_k127_7473690_1 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000001421 202.0
YHH3_k127_7473690_2 COGs COG0317 Guanosine polyphosphate pyrophosphohydrolase synthetase K00951 - 2.7.6.5 0.00000000000000000000000000000000000000000000000000002962 194.0
YHH3_k127_7473690_3 - - - - 0.0000000000000000000000000000000000002862 148.0
YHH3_k127_7473690_4 membrane - - - 0.0000000000002245 74.0
YHH3_k127_7473690_5 - - - - 0.000000000857 65.0
YHH3_k127_7473690_6 SMART Chromosomal replication initiator DnaA domain - - - 0.00000001079 58.0
YHH3_k127_749004_0 MafB19-like deaminase K01493 - 3.5.4.12 0.00000000000000000000000000000000000000000000000000000000001601 210.0
YHH3_k127_749004_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000001717 212.0
YHH3_k127_749004_2 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000003848 187.0
YHH3_k127_749004_3 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.0000000000000000000000000002708 120.0
YHH3_k127_749004_4 Protein involved in outer membrane biogenesis - - - 0.0000000000000000000000000009746 130.0
YHH3_k127_7530513_0 Domain of unknown function (DUF4921) K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005858 422.0
YHH3_k127_7530513_1 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003223 392.0
YHH3_k127_7530513_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000002239 177.0
YHH3_k127_7530513_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000001166 153.0
YHH3_k127_7530513_4 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000007097 73.0
YHH3_k127_7530548_0 Bacterial Ig-like domain (group 1) - - - 0.0000004299 63.0
YHH3_k127_7530548_1 Lamin Tail Domain - - - 0.000001503 55.0
YHH3_k127_7530548_2 - - - - 0.00006244 55.0
YHH3_k127_7533440_0 DNA replication proofreading K02336,K06877 - 2.7.7.7 0.000000000000000000000000000000000003242 158.0
YHH3_k127_7533440_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.00000000001303 78.0
YHH3_k127_7582701_0 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002205 280.0
YHH3_k127_7582701_1 ABC-type uncharacterized transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000003643 239.0
YHH3_k127_7582701_2 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000007207 182.0
YHH3_k127_7582701_3 TIGRFAM A G-specific adenine glycosylase K03575 - - 0.00000000000000000000000000000000000000001972 156.0
YHH3_k127_7582701_4 Domain of unknown function (DUF4340) - - - 0.00000000005817 74.0
YHH3_k127_7652980_0 Predicted permease K07089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 555.0
YHH3_k127_7652980_1 Sodium Bile acid symporter family K03325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 523.0
YHH3_k127_7652980_10 Transcriptional regulator K03892 GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0043170,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0046685,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000001979 91.0
YHH3_k127_7652980_11 Phospholipase D. Active site motifs. - - - 0.0000000000000001848 93.0
YHH3_k127_7652980_12 Histidine kinase K02660,K11525 - - 0.0000000000000005066 87.0
YHH3_k127_7652980_13 PFAM Fic DOC family - - - 0.0000001432 56.0
YHH3_k127_7652980_2 Alternative oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004497 284.0
YHH3_k127_7652980_3 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006057 291.0
YHH3_k127_7652980_4 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000000000000000008789 228.0
YHH3_k127_7652980_5 DsrE/DsrF-like family K06039 - - 0.000000000000000000000000000000000000000223 151.0
YHH3_k127_7652980_6 Cytochrome C biogenesis protein - - - 0.0000000000000000000000000000000000004967 145.0
YHH3_k127_7652980_7 Protein of unknown function (DUF2721) - - - 0.000000000000000000000000000000000002478 142.0
YHH3_k127_7652980_8 - - - - 0.00000000000000000000000000005739 123.0
YHH3_k127_7652980_9 Thioredoxin domain - - - 0.00000000000000000000000000006329 117.0
YHH3_k127_7653539_0 Protein of unknown function (DUF2914) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 403.0
YHH3_k127_7653539_1 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 384.0
YHH3_k127_7653539_10 endo-1,4-beta-xylanase activity - - - 0.00000000000000002266 93.0
YHH3_k127_7653539_11 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.00000001356 61.0
YHH3_k127_7653539_2 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 377.0
YHH3_k127_7653539_3 Protein of unknown function (DUF3570) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 353.0
YHH3_k127_7653539_4 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009968 300.0
YHH3_k127_7653539_5 Deoxyribodipyrimidine photo-lyase-related protein K06876 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002156 279.0
YHH3_k127_7653539_6 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008834 258.0
YHH3_k127_7653539_7 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000000000000000000000001667 205.0
YHH3_k127_7653539_8 Thioredoxin - - - 0.000000000000000000000000000000000001948 145.0
YHH3_k127_7653539_9 Domain of unknown function (DUF4266) - - - 0.000000000000000000000006086 103.0
YHH3_k127_7684406_0 Alpha amylase, catalytic domain K01176 - 3.2.1.1 4.27e-256 799.0
YHH3_k127_7684406_1 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 2.425e-216 681.0
YHH3_k127_7684406_2 Uncharacterized protein family UPF0016 - - - 0.000000000000000000000000000000000000000000000000000000000000000000002848 242.0
YHH3_k127_769214_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000002816 196.0
YHH3_k127_7699544_0 Cell cycle protein K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 303.0
YHH3_k127_7699544_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000001578 163.0
YHH3_k127_7738423_0 mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 358.0
YHH3_k127_7738423_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000002044 250.0
YHH3_k127_7744591_0 - - - - 0.0000000000000000000000000000000000625 140.0
YHH3_k127_7744591_1 E-Z type HEAT repeats - - - 0.000394 51.0
YHH3_k127_7744748_0 GTP cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000002257 237.0
YHH3_k127_7744748_1 haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000087 164.0
YHH3_k127_7744748_2 Periplasmic binding protein LacI transcriptional regulator - - - 0.00000000000000000000000000000000000000001635 166.0
YHH3_k127_7744748_3 Molybdopterin converting factor subunit K03635,K21142 - 2.8.1.12 0.00000000000000000000000003022 113.0
YHH3_k127_7863237_0 Belongs to the GPI family K01810 - 5.3.1.9 5.652e-274 851.0
YHH3_k127_7863237_1 PFAM multiple antibiotic resistance (MarC)-related protein K05595 - - 0.0000000000000000005488 89.0
YHH3_k127_7877056_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1352.0
YHH3_k127_7877056_1 Domain of unknown function (DUF4143) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 366.0
YHH3_k127_7877056_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.0000000000000000000001158 99.0
YHH3_k127_7877056_3 Serine threonine protein phosphatase K20074 - 3.1.3.16 0.00000002439 70.0
YHH3_k127_7879949_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 426.0
YHH3_k127_7879949_1 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006165,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:1901360 2.7.4.6 0.000000000000000000000000000000005286 134.0
YHH3_k127_7879949_2 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.000000000000000000000000005843 112.0
YHH3_k127_7879949_3 Methyltransferase K08316 - 2.1.1.171 0.0000000000000000000000003598 110.0
YHH3_k127_7879949_4 - - - - 0.00000004992 58.0
YHH3_k127_7879949_5 - - - - 0.000003691 51.0
YHH3_k127_7897706_0 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000564 149.0
YHH3_k127_7897706_1 Aerotolerance regulator N-terminal - - - 0.0000000000000000005502 99.0
YHH3_k127_7921488_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 404.0
YHH3_k127_7948892_0 CoA binding domain K09181 - - 0.0 1093.0
YHH3_k127_7948892_1 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000804 595.0
YHH3_k127_7948892_10 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.0000000000000000000000000000000000008376 147.0
YHH3_k127_7948892_11 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000002412 131.0
YHH3_k127_7948892_12 - - - - 0.0000000000000000000000000002171 128.0
YHH3_k127_7948892_13 cheY-homologous receiver domain K03413 - - 0.000000000000000000000006182 105.0
YHH3_k127_7948892_14 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.0000000000000000000008693 110.0
YHH3_k127_7948892_15 Domain of unknown function (DUF309) K09763 - - 0.0000000000000000002932 96.0
YHH3_k127_7948892_16 Histidine kinase - - - 0.0000000000000008124 91.0
YHH3_k127_7948892_17 phosphorelay signal transduction system - - - 0.000000000000003534 80.0
YHH3_k127_7948892_18 TIGRFAM cysteine desulfurase family protein - - - 0.0000001066 53.0
YHH3_k127_7948892_19 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.00003175 51.0
YHH3_k127_7948892_2 TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002617 520.0
YHH3_k127_7948892_3 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 387.0
YHH3_k127_7948892_4 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007962 308.0
YHH3_k127_7948892_5 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000001478 250.0
YHH3_k127_7948892_6 PFAM CheR methyltransferase, SAM binding domain K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000001592 236.0
YHH3_k127_7948892_7 Methyl-accepting chemotaxis protein (MCP) signaling domain K02660,K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000007392 238.0
YHH3_k127_7948892_8 Methyl-accepting chemotaxis protein (MCP) signaling domain K02660,K03406 - - 0.00000000000000000000000000000000000000000000000000000000004936 222.0
YHH3_k127_7948892_9 PFAM NUDIX domain - - - 0.00000000000000000000000000000000000000000005355 168.0
YHH3_k127_7952135_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679,K01744 - 4.2.1.2,4.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 561.0
YHH3_k127_7952135_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003973 306.0
YHH3_k127_7952135_2 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006932 271.0
YHH3_k127_7952135_3 RNA polymerase sigma factor K03088 - - 0.0000000000000000000000000000000000762 140.0
YHH3_k127_7952135_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000009033 128.0
YHH3_k127_7952135_5 membrane-associated protein - - - 0.00000000000000005524 90.0
YHH3_k127_7952135_6 COGs COG0058 Glucan phosphorylase K00688,K00691 - 2.4.1.1,2.4.1.8 0.000000000000006397 88.0
YHH3_k127_7980154_0 ATPase (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 545.0
YHH3_k127_7980154_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 337.0
YHH3_k127_7980154_2 DNA mediated transformation K04096 - - 0.000000000000318 73.0
YHH3_k127_7980154_3 - - - - 0.0000000002136 71.0
YHH3_k127_798899_0 surface antigen (D15) K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007832 349.0
YHH3_k127_798899_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001 310.0
YHH3_k127_798899_2 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000005171 269.0
YHH3_k127_798899_3 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02372,K02535,K13599,K16363 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0019171 3.5.1.108,4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000004296 254.0
YHH3_k127_798899_4 Protein of unknown function (DUF1009) K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000007856 236.0
YHH3_k127_798899_5 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000002327 178.0
YHH3_k127_8040072_0 Protein of unknown function, DUF255 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 382.0
YHH3_k127_8040072_1 Transposase IS200 like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001753 270.0
YHH3_k127_8040072_2 ORF6N domain - - - 0.000000000000000000000000000000000000000006927 160.0
YHH3_k127_8040072_3 Protein of unknown function DUF86 - - - 0.00000000000000000000000000000005578 129.0
YHH3_k127_8040072_4 Nucleotidyltransferase domain K07075 - - 0.000000000000000000000001106 106.0
YHH3_k127_8040293_0 Diacylglycerol kinase catalytic domain - - - 0.000008665 53.0
YHH3_k127_8040293_1 Type IV Pilus-assembly protein W K02672 - - 0.0008459 49.0
YHH3_k127_8048585_0 cellulase activity K01178,K14645,K18546 - 3.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005729 298.0
YHH3_k127_811807_0 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000001652 226.0
YHH3_k127_811807_1 PFAM metallophosphoesterase K07098 - - 0.000000000000000000000424 110.0
YHH3_k127_817228_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007479 327.0
YHH3_k127_817228_1 von Willebrand factor, type A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005375 311.0
YHH3_k127_817228_2 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000006289 164.0
YHH3_k127_817228_3 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000001294 88.0
YHH3_k127_8197113_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070041,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 311.0
YHH3_k127_8247731_0 Spermatogenesis-associated protein K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004164 271.0
YHH3_k127_8247731_1 Required for chromosome condensation and partitioning K03529 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000568 265.0
YHH3_k127_828924_0 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000001972 222.0
YHH3_k127_828924_1 TIGRFAM Addiction module toxin, Txe YoeB - - - 0.0000000000000000000000000000000000698 136.0
YHH3_k127_828924_2 Domain of unknown function (DUF4160) - - - 0.000000000000000000000000000000001363 130.0
YHH3_k127_828924_3 Protein of unknown function (DUF2442) - - - 0.0000000000000000000000000003812 115.0
YHH3_k127_828924_4 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.00000000000000000000000002571 110.0
YHH3_k127_828924_5 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000002938 94.0
YHH3_k127_828924_6 - - - - 0.000000000007201 69.0
YHH3_k127_8356784_0 Aminotransferase class I and II K14261 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004701 387.0
YHH3_k127_8363649_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 486.0
YHH3_k127_8363649_1 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 452.0
YHH3_k127_8363649_2 Autotransporter beta-domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000423 385.0
YHH3_k127_8363649_3 Putative MetA-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 336.0
YHH3_k127_8363649_4 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006678 293.0
YHH3_k127_8363649_5 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000005641 170.0
YHH3_k127_8363649_6 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000006853 164.0
YHH3_k127_8363649_7 - - - - 0.0000000000001885 78.0
YHH3_k127_8395414_0 Predicted membrane protein (DUF2339) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 612.0
YHH3_k127_8395414_1 Domain of unknown function (DUF4143) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 508.0
YHH3_k127_8395414_10 transcriptional regulator - - - 0.00000000000000000000004626 106.0
YHH3_k127_8395414_11 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.000000000000000000001287 110.0
YHH3_k127_8395414_12 Tfp pilus assembly protein FimV - - - 0.00000002571 68.0
YHH3_k127_8395414_3 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005147 361.0
YHH3_k127_8395414_4 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004353 336.0
YHH3_k127_8395414_5 Protein of unknown function (DUF3999) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 329.0
YHH3_k127_8395414_6 Belongs to the serpin family K13963 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006084 301.0
YHH3_k127_8395414_7 Uncharacterized conserved protein (DUF2183) - - - 0.00000000000000000000000000000000000000000000000000000000003641 218.0
YHH3_k127_8395414_8 Transcription factor zinc-finger K09981 - - 0.0000000000000000000000000000003497 130.0
YHH3_k127_8395414_9 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000000000000001229 125.0
YHH3_k127_8491177_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 562.0
YHH3_k127_8491177_1 Hydrolase, tatd K03424 GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 - 0.0000259 53.0
YHH3_k127_8541127_0 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003837 518.0
YHH3_k127_8541127_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001604 286.0
YHH3_k127_8541127_2 Domain of unknown function (DUF4143) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002582 278.0
YHH3_k127_8575920_0 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007339 326.0
YHH3_k127_8575920_1 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009602 274.0
YHH3_k127_8575920_2 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 - 2.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000001407 265.0
YHH3_k127_8575920_3 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000001433 181.0
YHH3_k127_8604300_0 PFAM Integrase catalytic region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005324 329.0
YHH3_k127_8604300_1 DNA replication protein - - - 0.0000000000000000000000000000000000000000000000000000001149 204.0
YHH3_k127_8604300_2 - - - - 0.000000000628 66.0
YHH3_k127_8607852_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0000000000000000000000000000000001355 143.0
YHH3_k127_8607852_1 - - - - 0.0001807 53.0
YHH3_k127_8622974_0 Sulfite reductase beta subunit (hemoprotein) K00381,K00392 - 1.8.1.2,1.8.7.1 0.00000000000000000000000000000000000000000000000000000000000004141 221.0
YHH3_k127_8622974_1 TIGRFAM DJ-1 family protein K03152 - 3.5.1.124 0.000000000000000000002104 96.0
YHH3_k127_8627784_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1585.0
YHH3_k127_8627784_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1264.0
YHH3_k127_8627784_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000002794 210.0
YHH3_k127_8627784_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000003933 179.0
YHH3_k127_8627784_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000008825 108.0
YHH3_k127_8627784_5 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0000000000000000000000002549 105.0
YHH3_k127_8627864_0 tail specific protease K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005439 348.0
YHH3_k127_8627864_1 Peptidase family M23 K21471 - - 0.0000000000000000000005935 98.0
YHH3_k127_8627864_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000000000000002733 85.0
YHH3_k127_8647345_0 Alpha-L-fucosidase - - - 0.000000000000000000000000005641 129.0
YHH3_k127_8647345_1 Ig-like domain from next to BRCA1 gene - - - 0.00000000000000000001724 108.0
YHH3_k127_8647345_3 Esterase PHB depolymerase - - - 0.00000000000002968 87.0
YHH3_k127_8732257_0 Belongs to the phosphoglycerate kinase family K00927,K01803 - 2.7.2.3,5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 385.0
YHH3_k127_8782714_0 Ammonium Transporter Family K03320 - - 0.000000000000000000000000000000007929 131.0
YHH3_k127_8782714_1 Amino acid permease - - - 0.0006269 47.0
YHH3_k127_8820002_0 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008056 314.0
YHH3_k127_8820002_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005368 304.0
YHH3_k127_8820002_10 His Kinase A (phosphoacceptor) domain - - - 0.000000002353 65.0
YHH3_k127_8820002_11 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000008931 60.0
YHH3_k127_8820002_12 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000146 55.0
YHH3_k127_8820002_13 PFAM outer membrane efflux protein - - - 0.000002524 60.0
YHH3_k127_8820002_14 nucleotidyltransferase activity K07076 - - 0.000002799 53.0
YHH3_k127_8820002_15 - - - - 0.0001671 49.0
YHH3_k127_8820002_16 positive regulation of growth - - - 0.0003248 47.0
YHH3_k127_8820002_2 PFAM membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.000000000000000000000000000000000000000000000000000000003303 216.0
YHH3_k127_8820002_3 PFAM ATP-binding region ATPase domain protein K07708 - 2.7.13.3 0.000000000000000000000000000000000007346 156.0
YHH3_k127_8820002_4 PhoQ Sensor - - - 0.00000000000000000000000000000000001261 156.0
YHH3_k127_8820002_5 PFAM Uncharacterised protein family UPF0079, ATPase K06925 - - 0.00000000000000000000000231 109.0
YHH3_k127_8820002_6 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.00000000000000000000002644 113.0
YHH3_k127_8820002_7 Histidine kinase K10681 - 2.7.13.3 0.000000000000000000002099 110.0
YHH3_k127_8820002_8 glycoprotease K01409,K14742 GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0000000000000000000372 100.0
YHH3_k127_8820002_9 HAMP domain - - - 0.00000000000000000005877 105.0
YHH3_k127_8820627_0 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 405.0
YHH3_k127_8820627_1 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.0000000000000000000000000000000000000000000000000000004836 197.0
YHH3_k127_8820627_2 - - - - 0.000000000000000000000000000000000000000000009796 174.0
YHH3_k127_8820627_3 acr, cog1430 K09005 - - 0.0000000000000000000002358 103.0
YHH3_k127_8839214_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 4.779e-196 629.0
YHH3_k127_8839214_1 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001394 280.0
YHH3_k127_8839214_2 PFAM Rhomboid family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000004234 226.0
YHH3_k127_8839214_3 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000001 225.0
YHH3_k127_8839214_4 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000002133 197.0
YHH3_k127_8839214_5 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.000000000000000000000000000000000000006524 157.0
YHH3_k127_8839214_6 determination of stomach left/right asymmetry K10407 - - 0.00000000000000001924 92.0
YHH3_k127_8839214_7 Tetratricopeptide repeat - - - 0.000000000005024 79.0
YHH3_k127_890068_0 NUBPL iron-transfer P-loop NTPase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002732 305.0
YHH3_k127_890068_1 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000007625 217.0
YHH3_k127_8913986_0 AAA ATPase, central domain protein K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 359.0
YHH3_k127_8913986_1 metallophosphoesterase K09769 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009339 289.0
YHH3_k127_8913986_2 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000004486 177.0
YHH3_k127_8913986_3 PIN domain - - - 0.00000000000000000000006913 106.0
YHH3_k127_8913986_4 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.000000000000000000001506 107.0
YHH3_k127_8913986_5 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.0001034 49.0
YHH3_k127_8939842_0 chalcone and stilbene synthase domain protein - - - 0.0000000000000000000000000000000000000000001976 169.0
YHH3_k127_8939842_1 long-chain fatty acid transport protein - - - 0.00000000005278 72.0
YHH3_k127_9007353_0 Ammonium Transporter Family K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 597.0
YHH3_k127_9007353_1 Cytochrome bd-type quinol oxidase subunit 1 K00425 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 560.0
YHH3_k127_9007353_2 COG1294 Cytochrome bd-type quinol oxidase subunit 2 K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 378.0
YHH3_k127_9007353_3 Ammonium Transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 332.0
YHH3_k127_9007353_4 Belongs to the P(II) protein family K04751,K04752 - - 0.00000000000000000000000000000000000000000000929 166.0
YHH3_k127_9009677_0 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005258 434.0
YHH3_k127_9009677_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000002846 142.0
YHH3_k127_9009677_2 - - - - 0.0000000000001473 78.0
YHH3_k127_9009677_3 Cytidylate kinase-like family - - - 0.0006535 49.0
YHH3_k127_9039038_0 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 467.0
YHH3_k127_9039038_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009479 408.0
YHH3_k127_9039038_2 GPI anchored protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002331 286.0
YHH3_k127_9039038_3 PIN domain - - - 0.00000000000000000000000000000000000002387 148.0
YHH3_k127_9039038_4 - - - - 0.0000000000003038 72.0
YHH3_k127_9149352_0 Predicted membrane protein (DUF2238) K08984 - - 0.00000000000000000000000000000000000000000000000000000000000005496 217.0
YHH3_k127_9149352_1 Iron-binding zinc finger CDGSH type - - - 0.000000000000000000000000009198 112.0
YHH3_k127_9149352_2 Methylmuconolactone methyl-isomerase - - - 0.00000000002227 70.0
YHH3_k127_9149352_3 Predicted membrane protein (DUF2238) - - - 0.0000005456 59.0
YHH3_k127_9149352_4 Crp Fnr family transcriptional regulator K21563 - - 0.000003436 55.0
YHH3_k127_9171767_0 Belongs to the glycosyl hydrolase 57 family K16149 - 2.4.1.18 5.871e-217 685.0
YHH3_k127_9171767_1 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.000000000000000000000000000000000000000006413 158.0
YHH3_k127_9171767_2 Domain of unknown function (DUF4912) K09942 - - 0.0000000000000000000000000000000000000001247 162.0
YHH3_k127_9171767_3 HD domain K07023 - - 0.000000002272 72.0
YHH3_k127_9227306_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835,K01840 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 443.0
YHH3_k127_9227306_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000003741 171.0
YHH3_k127_9227306_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000002704 88.0
YHH3_k127_9279397_0 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006679 357.0
YHH3_k127_9279397_1 Phosphate transport system permease K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 348.0
YHH3_k127_9279397_2 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004459 303.0
YHH3_k127_9279397_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000009677 266.0
YHH3_k127_9279397_4 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000001022 97.0
YHH3_k127_9318463_0 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000001497 185.0
YHH3_k127_9318463_1 Pkd domain containing protein - - - 0.0000000006983 72.0
YHH3_k127_935951_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 394.0
YHH3_k127_935951_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000000000000000000000007831 143.0
YHH3_k127_9366370_0 Glycosyl hydrolase 36 superfamily, catalytic domain K00702,K13688,K21298 - 2.4.1.20,2.4.1.333 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009776 644.0
YHH3_k127_9366370_1 Domain of unknown function (DUF4143) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 513.0
YHH3_k127_9366370_2 Domain of unknown function (DUF4143) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009828 471.0
YHH3_k127_9366370_3 PFAM Transposase IS200 like - - - 0.00000000000000000000000000000000000000000000000000000000002632 209.0
YHH3_k127_9366370_4 Tellurite resistance protein TehB - - - 0.00000000000000000000000000000000000000000000000000000000004022 213.0
YHH3_k127_9366370_5 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.0000000000002305 87.0
YHH3_k127_9366370_6 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000008008 68.0
YHH3_k127_9366370_7 Tellurite resistance protein TehB - - - 0.0003338 46.0
YHH3_k127_9390532_0 ATPase (AAA superfamily K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005385 448.0
YHH3_k127_9390532_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 317.0
YHH3_k127_9390532_2 Domain of unknown function (DUF4143) K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 312.0
YHH3_k127_9390532_3 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process K03361,K10260 GO:0000003,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0007275,GO:0007548,GO:0008150,GO:0008593,GO:0009966,GO:0009968,GO:0010564,GO:0010639,GO:0010646,GO:0010648,GO:0010824,GO:0010826,GO:0010948,GO:0019899,GO:0019900,GO:0019901,GO:0022414,GO:0023051,GO:0023057,GO:0030424,GO:0031647,GO:0032501,GO:0032502,GO:0032886,GO:0033043,GO:0040028,GO:0042802,GO:0042803,GO:0042995,GO:0043005,GO:0044424,GO:0044464,GO:0045746,GO:0045786,GO:0046605,GO:0046606,GO:0046660,GO:0046983,GO:0048519,GO:0048523,GO:0048580,GO:0048583,GO:0048585,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051129,GO:0051239,GO:0051493,GO:0051494,GO:0051726,GO:0061062,GO:0065007,GO:0065008,GO:0070507,GO:0097458,GO:0120025,GO:2000026 - 0.000000000000000000000000000000000002654 162.0
YHH3_k127_9390532_4 PFAM filamentation induced by cAMP protein Fic - - - 0.000000000000000000000179 100.0
YHH3_k127_940215_0 MltA specific insert domain K08304 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001386 260.0
YHH3_k127_940215_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 0.000000000000000000000000000000001454 141.0
YHH3_k127_940215_2 - - - - 0.0000000000002708 79.0
YHH3_k127_9423127_0 ATPase (AAA superfamily K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 344.0
YHH3_k127_9423127_1 SMART Chromosomal replication initiator DnaA domain - - - 0.0000001568 54.0
YHH3_k127_9426347_0 HI0933-like protein K10210 - 1.14.99.44 2.441e-222 699.0
YHH3_k127_9426347_1 Flavin containing amine oxidoreductase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 1.226e-195 623.0
YHH3_k127_9426347_2 Belongs to the aldehyde dehydrogenase family K00128,K22445 - 1.2.1.3,1.2.99.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007239 463.0
YHH3_k127_9426347_3 Uncharacterized protein conserved in bacteria (DUF2141) - - - 0.000000000000000000000003229 111.0
YHH3_k127_9426347_4 glycosyl transferase family 2 K10211 - - 0.000000000000003859 80.0
YHH3_k127_9426347_5 Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation K09811 - - 0.0002722 51.0
YHH3_k127_9431575_0 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000003314 171.0
YHH3_k127_9431575_1 Enoyl-(Acyl carrier protein) reductase K03793 - 1.5.1.33 0.000000000000000004824 86.0
YHH3_k127_9474628_0 hydrolase, TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000005384 207.0
YHH3_k127_9474628_1 Lysin motif - - - 0.0000002971 63.0
YHH3_k127_9474628_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.0000003157 54.0
YHH3_k127_9508493_0 Phosphofructokinase K00850 - 2.7.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 549.0
YHH3_k127_9508493_1 SMART Chromosomal replication initiator DnaA domain - - - 0.00000001402 57.0
YHH3_k127_9508493_2 Pyruvate kinase, alpha/beta domain K00873 - 2.7.1.40 0.00005036 45.0
YHH3_k127_960720_0 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008255 273.0
YHH3_k127_960720_1 general secretion pathway protein K02456 - - 0.00000000125 64.0
YHH3_k127_960720_2 Belongs to the N-Me-Phe pilin family K02650 - - 0.0000001036 60.0
YHH3_k127_9668870_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00895 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008443,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0046835,GO:0046872,GO:0047334,GO:0071704,GO:1901135 2.7.1.90 5.344e-213 676.0
YHH3_k127_9668870_1 lyase activity K11645 GO:0003674,GO:0003824,GO:0004332,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016829,GO:0016830,GO:0016832,GO:0042802,GO:0044424,GO:0044444,GO:0044464 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 547.0
YHH3_k127_9668870_10 Prokaryotic N-terminal methylation motif - - - 0.000000000005092 72.0
YHH3_k127_9668870_11 - - - - 0.000000003511 67.0
YHH3_k127_9668870_2 ABC transporter K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 391.0
YHH3_k127_9668870_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009614 382.0
YHH3_k127_9668870_4 PFAM ATP-binding region, ATPase domain protein K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000001855 260.0
YHH3_k127_9668870_5 Transcriptional regulatory protein, C terminal K07658 - - 0.000000000000000000000000000000000000000000000000000000002088 211.0
YHH3_k127_9668870_6 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000001456 198.0
YHH3_k127_9668870_7 PFAM thioesterase superfamily K07107 - - 0.0000000000000000000000000000000001999 142.0
YHH3_k127_9668870_8 response regulator K07668,K07775 - - 0.0000000000000000000000000000000164 130.0
YHH3_k127_9668870_9 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000002062 108.0
YHH3_k127_9669942_0 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005594 290.0
YHH3_k127_9669942_1 heptosyltransferase II K02843 - - 0.0000000000000000000000000000000000000000000006078 178.0
YHH3_k127_9669942_2 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000000000000004546 160.0
YHH3_k127_9669942_3 Electron transfer flavoprotein K03522,K22432 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 1.3.1.108 0.000000000000000000000000000000005328 129.0
YHH3_k127_9669942_4 Transmembrane and TPR repeat-containing protein - - - 0.0000005911 59.0
YHH3_k127_9669942_5 OmpA family K03286 - - 0.00004652 55.0
YHH3_k127_9677142_0 Involved in the fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to a coenzyme A (CoA) K00209 - 1.3.1.44,1.3.1.9 0.0000000000000000000000000000000000000000000167 165.0
YHH3_k127_9677142_1 glycosyl transferase family 2 K20534 - - 0.0000000000002549 72.0
YHH3_k127_9677142_2 Protein SSUH2 homolog - - - 0.00001024 59.0
YHH3_k127_9732454_0 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004873 424.0
YHH3_k127_9732454_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000007242 279.0
YHH3_k127_9732454_2 Haloacid dehalogenase-like hydrolase K07025 - - 0.000000000000000000000000000000000000000000001306 176.0
YHH3_k127_9732454_3 MazG family K02499 - - 0.000000000000000000000000000000000000003653 150.0
YHH3_k127_9732454_4 Cytochrome C assembly protein - - - 0.0000000000000000000000000000002197 134.0
YHH3_k127_9732454_5 Protein of unknown function (DUF2442) - - - 0.000000000000000000000005857 104.0
YHH3_k127_9732454_6 Biotin/lipoate A/B protein ligase family K03800 - 6.3.1.20 0.000000000000000003072 93.0
YHH3_k127_9852970_0 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008386 282.0
YHH3_k127_9852970_1 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate K10206 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000003131 205.0
YHH3_k127_988117_0 Acyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009608 357.0
YHH3_k127_988117_1 lysine biosynthetic process via aminoadipic acid K00997,K06133 - 2.7.8.7 0.0000000000000000000000000000000000000000000000000000001324 204.0
YHH3_k127_9891311_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 5.96e-311 977.0
YHH3_k127_9891311_1 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 394.0
YHH3_k127_9891311_2 ANTAR - - - 0.0000000000000000000000000000000000000000000004823 172.0
YHH3_k127_9891311_3 Phosphate-starvation-inducible E - - - 0.0000000000000000000000000277 115.0
YHH3_k127_9891311_4 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.0000000000000002601 81.0
YHH3_k127_9905751_0 Pyruvate ferredoxin/flavodoxin oxidoreductase K00179,K04090 - 1.2.7.8 2.02e-278 887.0
YHH3_k127_9910821_0 PFAM Binding-protein-dependent transport system inner membrane component K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006636 438.0
YHH3_k127_9910821_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 410.0
YHH3_k127_9910821_2 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003542 400.0
YHH3_k127_9910821_3 Protein of unknown function DUF47 K02039,K07220 GO:0000287,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006873,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0016020,GO:0016036,GO:0019220,GO:0019222,GO:0019725,GO:0019897,GO:0019898,GO:0022898,GO:0030002,GO:0030145,GO:0030320,GO:0030643,GO:0031323,GO:0031324,GO:0031667,GO:0031668,GO:0031669,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032879,GO:0033554,GO:0034605,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0040008,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043269,GO:0043271,GO:0044070,GO:0044092,GO:0044419,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045936,GO:0046677,GO:0046872,GO:0046914,GO:0046983,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051174,GO:0051704,GO:0051716,GO:0055062,GO:0055081,GO:0055082,GO:0055083,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071496,GO:0071944,GO:0072501,GO:0072502,GO:0072505,GO:0072506,GO:0098771,GO:0104004,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.0000000000000000000000000000000000000000000000141 185.0
YHH3_k127_9910821_4 CHAD - - - 0.0000000000000000000000000001757 125.0
YHH3_k127_9910821_5 inorganic phosphate transmembrane transporter activity K02037,K02038 - - 0.000000000000004975 76.0
YHH3_k127_9910821_6 Phosphoglycerate mutase family K03574 - 3.6.1.55 0.00001113 57.0
YHH3_k127_9914597_0 lipid A export permease ATP-binding protein MsbA K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004583 509.0
YHH3_k127_9914597_1 ZIP Zinc transporter K16267 - - 0.000000000000003992 84.0
YHH3_k127_9920044_0 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 294.0
YHH3_k127_9920044_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001234 282.0
YHH3_k127_9920044_2 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000002541 207.0
YHH3_k127_9920044_3 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000003941 192.0
YHH3_k127_9920044_4 Polyprenyl synthetase K02523 GO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009108,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0042180,GO:0042181,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901615,GO:1901617,GO:1901661,GO:1901663 2.5.1.90 0.0000000000000000000000000000000000000000000000906 177.0
YHH3_k127_9920044_5 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions - - - 0.0000000000000000000000000000000000000004047 151.0
YHH3_k127_9920044_6 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000003755 78.0
YHH3_k127_9949053_0 helicase - - - 0.0 1594.0
YHH3_k127_9949053_1 DEAD/DEAH box helicase K01156 - 3.1.21.5 0.0 1498.0
YHH3_k127_9949053_10 Transposase, Mutator family - - - 0.0000000000007256 72.0
YHH3_k127_9949053_11 K01174 micrococcal nuclease K01174 - 3.1.31.1 0.0000003382 61.0
YHH3_k127_9949053_12 Protein of unknown function (DUF1016) - - - 0.000003435 58.0
YHH3_k127_9949053_2 PFAM DNA methylase N-4 N-6 domain protein K07316 - 2.1.1.72 9.943e-240 758.0
YHH3_k127_9949053_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 569.0
YHH3_k127_9949053_4 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 372.0
YHH3_k127_9949053_5 Sel1 domain protein repeat-containing protein K07126 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006885 327.0
YHH3_k127_9949053_6 Domain of unknown function (DUF4391) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009707 271.0
YHH3_k127_9949053_7 Transposase, Mutator family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002019 261.0
YHH3_k127_9949053_8 Type III restriction enzyme res subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000002245 262.0
YHH3_k127_9949053_9 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000009774 198.0
YHH3_k127_9968488_0 Phage integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008247 361.0
YHH3_k127_9968488_1 Protein of unknown function (DUF3800) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003994 302.0
YHH3_k127_9968488_2 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000002141 187.0
YHH3_k127_9968488_3 - - - - 0.0000000000000000000000007029 113.0
YHH3_k127_9968488_4 by glimmer - - - 0.000000000000000007418 89.0
YHH3_k127_9968488_5 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.0002478 46.0